Moc10g01420 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g01420
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Cleavage and polyadenylation specificity factor subunit 2
Location	chr10: 888724 .. 896918 (-)
RNA-Seq Expression	Moc10g01420
Synteny	Moc10g01420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAACCTCTGTTCAGGTGACGCCTCTTTGCGGGGTCTACAATGAAAACCCTCTATCATATTTGGTCTCCGTCGACGGCTTCAACTTCCTTATTGACTGTGGTTGGAACGACCACTTCGACCCTGCTCTTCTTCAACCTCTCTCCAGGTTCGCTTTCTCAATTTTTCTTCGCAATTTGTTTTGTTTGAGCTTAATTTTTAAATTCCATGCACGGAAGCTACTTAATACCATATGAATGCCGGATGCTGCTGGCTGAAAAGCAGTGGAGTACTTTCTTTAGAAGTCGTACTTCATTTTGAACAGAACGGGTTTACTGAATTAAAGGGAAAAGAAGGGATAATTGCTCACTGGATAAAAGGCTTCTCAACAAATGGGCTATATACTTGATTTTTGTTTATGTCCATCGGCCTTAATGCATAATTGTGGTATTTCAGGGTGGCATCGACGATAGATGCAGTTTTGATATCACATCCTGATACACTTCACCTTGGTGCCCTTCCTTATGCCATGAAACAGCTTGGACTTGCTGCTCCAGTTTTTTCCACTGAACCCGTGTATCGATTGGGCCTTCTTACAATGTATGATCAGTATATTGCTAGGAAGGTAAGAGTTTTTCATGTAATTTGGTTCCTAAATGCTATTAGTTTACCAAATGAAAACAAGCTACTGCACTATTTACCCCGACTTTGAAAAAAGACTTGCACTCAAGTTTGGAGTGAAGTAAAGAATGAAGTTCTTTTGTAGCCTTGTGAGCGTGATATACTCCCACAATTATGGGAGTGATGACTGACGTAGCAAGTTTTTGTCAATTTTGTATATGACATTTTTTGCAGTTAACTTGTCTAGGTCCAGTTTATATGTGGGCTTGGCCCCATAAAGTTTTTTGTATTTCTTGTCATTTTTCTTATTTTTGATTGTTTGTGGTGGATTCGGGGGGGGGGGGGGGGGGGGTGGGGTGGGGAATCGCGGATCATTATCAGAACCAAGTTCTGTATTTCATTTGAAGATGGATGCTAATGTAATGTAATGCTGACAATTCATATTCCCATTTGTTATGAGTAATCCTTTTATATTTGAGTCAAAATAATAGTTTCTGCATCTCATATTTGCCATTGATTACTGATTGGTGTTTTCACTAGCTTTTCATTCAATGGATTCTTCTTAATTGTCTTTGTGCTGGGTGTTGCCATATGGACGCCTACCCTTTCCCCTCTGCAGCAAGTATCGGAGTTTGATCTATTTACATTGGATGATATCGATTCTGCTTTCCAAGTTGTAACCAGACTAACATACTCCCAGAATCATCATCTTTCAGGTGGCTATTCTCGGTCTTGTTTATTTAAGATCAAAGTTAGTCAATCTCTCTCTCTCTCTCTCGGTTGGTTAATAATGCCGTATGTTTGATTATGACCTCACCTAATATATCTTGGAAACTCAGTCACTCATTCATCTAAGAAGCAAAAATAAGATATGACATGATATGTTATGAATATAATGACTGTCATTTTCTAAACAGAAAAGAAAAAGGAAAAAAACTGAAGGACATCTACATGACAATAACAATTTTGCTGAAATATGTGTCTCCTATGGGCAATTAAAGATGCCAATGACATGTTTCCCATGATGCTGCATTTTACAACAATGTCATATAAAAGCAATGGAAAACCAAATAACCATATTTCTAAGGATTCAATGTCTTCAAAGAAAAAGAAATTTAAAATCAAATATTTCCATACAATGGATATGCTTAAATGGTTTAATGTTTGAACCCTAGTCATCCGTCCTTTTGTTTACATTTTGTTCTTCAATGCCTTTGTCTCTTATTAACAAAATTACTTTGCTCTCTTATTTTTGTTGTATCTCATGCATGAACTTGTTTGTATCTGTTTGAAATTAAAAAAAATAGTATAAAGAGATTTAACAATTGAGTTTGAATGTCCAATTAGTGTTGGATTGTTAAGGTATCCAGCTTATATAAAACATGGCCATACTACTTAGATTAAAATGTCTGTTCTCTATAGTTGTATAGCGATGTGATGATTTGTTGAAATTTGTTGTTAAGACTTGGCAATTCCTTTTTTCTTTTAATATAGATATATATTTTATTTTTTTAAGATGAGACTAAACTTTCATTAAGAACCAAAAAAAATTATGTGGAGCAGGCCCAAAAGCCCAACAAAACAAGAACTAACCAGAAACCACTCAATATTTTCAATAAAAGAAGTAGATGTCTCAAAATAAAAGGAGAGTAAAGACCAAAAGGCAAATATTGAATGCTAATCAGGAAGAAGGTTATGGCTTATTATTTGTTTACCGTTACTTAGGTTGTTCTCAAATACTTAGGCTGTATAGAGTCTCTTTCCTTTGGCTTTTGCGATCTTGTGGGTGTGCAGTAGAGATTGTTGTTCTATGATAGAGGCAATTCTTCATTTTCCTCCCTTTTGAGTGTTTTTGCAGGCCTGTTTTTTTGCTATTTTTGGTGGGTTTATGACTTGAGAGGCATTTTTAGAGGGGTGAAGAAGTCTTGGAAGATGTGTGGGAGGTTGTTAGATTTAATGCCTCTTTGTAGGGTTCTGTTACTAAACCATTTTGTAATATCGGTTAGGTTTTATTATTTTGGATGGGAGCTGTTTGTTAGTTTGGACTCCTTATGAGGGGCTGGTTTCTTGTTATGCCATTGTTTTTAATTTCATGTTTCTCAATGAAAGTATGGTTTTTCATTTTAAAAAAACTCCTCTCTAATATTTTAATGACAGGCAAAGGAGAGGGAATAGTTATTGCACCTCACGTGGCTGGGCATCTTTTGGGGGGAACCCTATGGAAGATAACTAAGGATGGAGAAGATGTTATATATGCTGTTGACTTCAACCACCGCAAGGAAAGGTATAGTAACTGTTGTTACAAGCACCATCACTTGCATTAAGATAATACAAGGATACTTATTTTAACTTACTATCAGGCATCTGAACGGAACCATTTTAGAGTCATTTGTGCGACCTGCTGTATTGATAACTGATGCTTATAATGCTCTAAATAATCAACCTTACAGACGCCAAAAGGACAAAGAATTCGGAGGTACTTAAAATCTGTTTTAGGTTTTTAAAATTCTTCATTGCATCTGCAAGAGATTCCATCATTTGCCTCATTCTTCCCCTCAGCCTCCATGCCTGCTTGCGGGGAAAAAGTGTATTTATGCTAAAAGTCCTTTGTTAAGGATGATTAGTAGTTTTTGCCAATAATTGTTGATGAAAGTTACCATTTTGGTTAACATAGATACTATCCAGAAGACCTTAAGAGCTAATGGAAATGTGTTACTTCCTGTTGATACTGCTGGGCGAGTGTTGGAGCTTATTCAAATTTTGGAATGGGTTAGTTGGGGGACGATAAAACCCCTTTTGTCTTTTAATCTATTTTTGTTGTAAAAATTTTCATTCGTGTTAACTAAGAAGCAATGTTCAGTCTCATTGATAAATCATTGTTATTATTGCAGTACTGGGAAGAAGAAAGTTTAAATTATCCCATCTACTTTTTAACTTATGTTTCATCAAGCACAATTGATTATATCAAGAGTTTCCTGGAGTGGATGAGTGATACAATAGCAAAGTCTTTTGAACACACACGGAACAATGCTTTTCTTCTCAAGTAAGTATTCTTCTAAGTGTTACATTTTCTCTCTTTCGGTAGGAAAGTGAAAATTCATTTAAAAAGAAAGGAGCACAGACAAGGGGATAGTTGCAAGTAAATCCCGTTGCCTTGAGGGTTCAAGTGTTTCATATTTTATAACATGCTCTAGTTGCCTTTGATTTTAGAAATTGAGACTAAAATAAATTTTAATTTAGCAGAGTGCTGTGAAGTGATATGAGTGAAACTAAGAACTCTTACCAGGCAGTTGCTCCAAATCTTGCAGGCATGTGACCCTTCTAATCAATAAAAGTGAACTTGATAATGCTCCAGATGGTCCAAAGGTTAATTGCAATAAATTGTTGATTTTGCTCAATGTTTTACCTCCTTTTGCTCGACATTTAAATGAATTGCCTTTTATGTCATATCTCTTATAGGTTGTTCTAGCATCAATGGCTAGTTTGGAAGCTGGTTACTCACATGACATTTTTGTTGAGTGGGCAAATGATGCCAAAAATCTCGTGCTTTTTTCTGAGAAAGGCCAGGTATTCTTCAGTAACTTGTTTACTTGGTTAGCATTCCAGACCTTTCTAGTGATTTTTCATGTTTTGGTTTTCTATCAGTCTTCAGTCCTAGGAACTCATTGGCTGTTCTCCAAAATTTATTTGTAACACTAGCAAGAATGCTGTTCCATCTTTATTTCCATTTTAAAAAAATCTTCCATAGATTAGATGAGAGGTTTCTGTCATTGAAAACAACAACATGTTTAATCTTATTCCAAGTTGCTTTCTTAGTTCTTCTAGGAAAGACTACATTTTATGTTTAATCCCATTTTATCTTAATTTCCAAGTAGATGGTCTTTCTGGCAATAGTCAGTGACAATTTATTTTTTAGTATACTCTTAGTGCCATAATTATTTTTAGTATACTCTTAGTGCCATGTGCGTGCCTTGCTAGGACTGTGCTTGGAAGTTGGAACACTAATTATGTAGTTTTTTTTCTGCGTCTACTAGCATGTTAAACTGCATGCTTCGTTGAACTCTTATAACTCCTACATTGTATTGTGAATGTGTAACCCCTTCAGTTGGAAAATGTAGTTTGCCACTTTGGCTCGTATGCTTCAAGCAGATCCACCTCCAAAAGCTGTTAAGGTAACTGTGTCTAAGAGAGTTCCTTTGGCTGGAGACGAGCTACTTGCTTATGAAGAAGAGCAAAACAGGAAAAAGGAAGAAGCTCTTAAGGCTAGTTTGCTCAAGGAGGAACAATCCAAAGCATCTCATGGAACTGATAATGATACTGGTGATCCAATGATCATTGATGCTAGCAGTAATGCATCACCAGATGGTACGATGATCTGCAGTTTTGTAGAGCGTGCAAACTTTTTACAGTTAGGAATTATGATCATCCAAACTGTCTACTTGAATTGGCAAAGATATTTTAAGTGAAAATGAAATTGGTTATAGAAACATTAAACAAAAAGTTTTCCCGAACTCTGTTATGGAAACATTGAATGCCGAGTTTATGTAGGTTACTTTGAACTTTCTATATTCTAACAAGGGTCATTTGATGTGTCATGACCTTAATTGAACATGATCTGCAATATAGTTTGTTGAGTTATAAGGGTCATTAGATGTGTCAGGTTTCTGCTTCAATTAATTTTTTTTTGTTATTTTTAAATGCTGCTGGAGGATATAAATGCTATAAATGCCCCTGAGACATTGATCTATTACTTAGTGTCAACTATTGCTTGGACACAACACAACTATTTGAATTACATCAGATATTTTGGTTGTCATTATCTTTTCTTAGTCCGAACTTACATGCATCCAGTGGCAGCCGAAATGGATTTCTACATCTATTAGACTTAAGATTTTGTCAGTTATGCGATCAAAGCAAGTAGAAAAGGAGATCCTTATCTTCACTACAATCATCAATCTGATCTGTGAATTCTTATGATTTGCTTTGAATCAATTTTCATTTCTTTACACTTAGCTGTAAAATCTTCCTGCATTTTTTCATATTTGGTCAATGGACGTCTAGTGGGTTTAAACTGTGGCAATTCTCCAGGCTTGTCGATGAATGTTTTTTCTATTGGAATTATAACATATGTTTTAATAATTTTTAGTGGAATTAATTGGTTGTCTGATTGTATCTTGCAGTAGGTGGTTCACATGTAAGTGCATATCGAGATATATTAATTGATGGCTTCGTTCCTCCTTCAACAAGCGTTGCTCCAATGTTTCCCTTTTATGAAAACACTTCCGAATGGGATGATTTTGGTGAAGTAATAAATCCTGATGATTATGTAATTAAGGATGAAGACATGGACCAAGCAGCGATGCATGTAAGATTCATTGATGAAGTCCTTCCTTGTAGTATAATTTAGGGAACCGTTTTTTTTGTTTTCTGAGAAGAGAAACCATTTTGTTAAACATTGAATATAATATCCTGTTTGCTTTGAATTTTGAGAATGAGTTTCTTTTCTTCTTTGGTTGGATGAGAAGCCAATACTTTTTGGGTTTAAAATTTGTTGTCATTAATAGCTCACAGTTAAATGAACTTGAATTTTATGCCCTTTGTCATTTGCATTGTGAATGGATTGCAAATTTACTAGAACCAAACTTGCAGGCTGGTGGGGACGTGGATGGAAAACTAGATGAAACTGCTGCTAACCTGATCCTGGATATGAAGCCTTCAAAAGTTGTATCTAACGAATTGACAGTAAGTTGTTCTCTGATTAAAGTTCTTTTAAGGTTTATATTTGTCGGTTGAAGTCACATGAATGTGAATTTGATGTTATTGTCACCAAAATATATAAAACATATATAAAGGTTCTTTATAGTAAAACCTTTTACTTATGGAGAAGTTATAATGAGTTAATGAAAATTTTTTTTCCCTGATCTGTCACTTCTTTTTCCAAGTGCTCAATTTTATATTTTCCATTGATCATCTTTGTTCCCATGTTCAATTTGGAGATACAATCAAGTTATTTATCTACTGACCCTGACGCAGTATATGTTTCTACAATTTCCCTGTCCAGGTCCAAGTGAAATGTTCATTGCATTACATGGATTTTGAAGGTCGTTCAGATGGGAGATCAATTAAATCAATACTCTCCCACGTTGCTCCCTTGAAGCTTGTATGGTGTTTTCTTATAACTGCTGTTGCGTTGTGTATAAATAAGTTTGTGACATTTGTAACTATAGATTGTAGGAAGAAAGCTCAGTGTAGCTGAGTTGGTATATTCTGAGAAATTTCCTATGAGTTGATTGGATATTGATCCACGTTGTGTGTACTCGCGATATCTTTTTGTTGTTTCATTAAGCATTGTTCAGCGTTACCCCAAAAATTACTTATATCAATGACCAACCATTTGATTTTTTTTCTCTTTTTATAAATGTTGTTTGAAGGTTTTGGTGCATGGAACTGCTGAGGCCACTGAGCATCTTAAGCAACATTGCCTAAAAAACGTCTGTCCCCATGTCTATGCCCCCCAAATTGAAGAGACGATTGATGTGACTTCTGATCTGTGTGCATATAAGGTAGGGTACAGTCGAGACTCTTCATTTCCTTTTCAGGTTGTGATTTCATATATTGAAGCTAACAAAATCTCCGATTCTTGAATTTCAGGTACAACTTTCAGAGAAACTGATGAGTAATGTGCTGTTCAAGAAGGTAAAGTTTTGGATACCCATGCAATTTTCTTTCCAAAATTAACTTGTTCTTTACATTAGTGTAAGCAGTCTTCCTTATGATGTCTGACATAATTTCAAGTACAGCTTGGAGATTATGAAATCGCTTGGCTTGATGCTGAAGTAGGGAAGACTGAGAATGGAACGTTGTCTTTACTTCCCCTCTCAAAGGCTGCTTTGCCTCATAAATCTGTTCTTGTTGGTGACTTAAAGATGGCTGACTACAAACAATTTCTTGCCAGCAAGGGAATACAGGTATCTTTGCTTGTGAACCTCCCTCTTGAAGGGAATAAATATCCCCTTTTTGACATGTAGAGACACTAAATCCGCAATGGAGCGAGTAAGAAAAGTGTCATCCTATGTGCATTGCAGGTGGAATTTGCTGGGGGTGCTTTGAGATGCGGTGAGTATGTCACAATACGCAAGGTTGCAGATGCAAGTCAGAAGGTGAGGAATTCTAAAATATTGGGAAAATAGACAAATTGGATATGACTTTTAATATTGCTTACCGGATTATTCCCCAAAGGGTAGCCCGGTTGACAAGGTTTGGGATCTCTTGGTCATACTGGCTTAGAGGTCTCAACTTCGAACCTCCGGTGAACTTAATACCAAAAACCCTTGAGTACAGGAAAGCAAAGCTACGACTCCTAGTTATCAAAAAAATAAAAATGAAAATTGCTTACCGACTTTGAACCATGCTTCGGCTCCATACCACAAATGAAATGCATGTTTGCTTGTAGTGATGTTGTTTGGCTAATACTATCTCCATATTTATGCAGGGTGGCGGTTCTGGTACTCAGCAAGTTGTCATCGAAGGGCCCTTATGTGAGGATTATTATAAAATTAGGGAACTTCTGTATTCACAATTTTATTTGCTGTAG

mRNA sequence

ATGGGAACCTCTGTTCAGGTGACGCCTCTTTGCGGGGTCTACAATGAAAACCCTCTATCATATTTGGTCTCCGTCGACGGCTTCAACTTCCTTATTGACTGTGGTTGGAACGACCACTTCGACCCTGCTCTTCTTCAACCTCTCTCCAGGGTGGCATCGACGATAGATGCAGTTTTGATATCACATCCTGATACACTTCACCTTGGTGCCCTTCCTTATGCCATGAAACAGCTTGGACTTGCTGCTCCAGTTTTTTCCACTGAACCCGTGTATCGATTGGGCCTTCTTACAATGTATGATCAGTATATTGCTAGGAAGCAAGTATCGGAGTTTGATCTATTTACATTGGATGATATCGATTCTGCTTTCCAAGTTGTAACCAGACTAACATACTCCCAGAATCATCATCTTTCAGGCAAAGGAGAGGGAATAGTTATTGCACCTCACGTGGCTGGGCATCTTTTGGGGGGAACCCTATGGAAGATAACTAAGGATGGAGAAGATGTTATATATGCTGTTGACTTCAACCACCGCAAGGAAAGGCATCTGAACGGAACCATTTTAGAGTCATTTGTGCGACCTGCTGTATTGATAACTGATGCTTATAATGCTCTAAATAATCAACCTTACAGACGCCAAAAGGACAAAGAATTCGGAGATACTATCCAGAAGACCTTAAGAGCTAATGGAAATGTGTTACTTCCTGTTGATACTGCTGGGCGAGTGTTGGAGCTTATTCAAATTTTGGAATGGTACTGGGAAGAAGAAAGTTTAAATTATCCCATCTACTTTTTAACTTATGTTTCATCAAGCACAATTGATTATATCAAGAGTTTCCTGGAGTGGATGAGTGATACAATAGCAAAGTCTTTTGAACACACACGGAACAATGCTTTTCTTCTCAAGCATGTGACCCTTCTAATCAATAAAAGTGAACTTGATAATGCTCCAGATGGTCCAAAGGTTGTTCTAGCATCAATGGCTAGTTTGGAAGCTGGTTACTCACATGACATTTTTGTTGAGTGGGCAAATGATGCCAAAAATCTCGTGCTTTTTTCTGAGAAAGGCCAGTTTGCCACTTTGGCTCGTATGCTTCAAGCAGATCCACCTCCAAAAGCTGTTAAGGTAACTGTGTCTAAGAGAGTTCCTTTGGCTGGAGACGAGCTACTTGCTTATGAAGAAGAGCAAAACAGGAAAAAGGAAGAAGCTCTTAAGGCTAGTTTGCTCAAGGAGGAACAATCCAAAGCATCTCATGGAACTGATAATGATACTGGTGATCCAATGATCATTGATGCTAGCAGTAATGCATCACCAGATGTAGGTGGTTCACATGTAAGTGCATATCGAGATATATTAATTGATGGCTTCGTTCCTCCTTCAACAAGCGTTGCTCCAATGTTTCCCTTTTATGAAAACACTTCCGAATGGGATGATTTTGGTGAAGTAATAAATCCTGATGATTATGTAATTAAGGATGAAGACATGGACCAAGCAGCGATGCATGCTGGTGGGGACGTGGATGGAAAACTAGATGAAACTGCTGCTAACCTGATCCTGGATATGAAGCCTTCAAAAGTTGTATCTAACGAATTGACAGTCCAAGTGAAATGTTCATTGCATTACATGGATTTTGAAGGTCGTTCAGATGGGAGATCAATTAAATCAATACTCTCCCACGTTGCTCCCTTGAAGCTTGTTTTGGTGCATGGAACTGCTGAGGCCACTGAGCATCTTAAGCAACATTGCCTAAAAAACGTCTGTCCCCATGTCTATGCCCCCCAAATTGAAGAGACGATTGATGTGACTTCTGATCTGTGTGCATATAAGGTACAACTTTCAGAGAAACTGATGAGTAATGTGCTGTTCAAGAAGCTTGGAGATTATGAAATCGCTTGGCTTGATGCTGAAGTAGGGAAGACTGAGAATGGAACGTTGTCTTTACTTCCCCTCTCAAAGGCTGCTTTGCCTCATAAATCTGTTCTTGTTGGTGACTTAAAGATGGCTGACTACAAACAATTTCTTGCCAGCAAGGGAATACAGGTGGAATTTGCTGGGGGTGCTTTGAGATGCGGTGAGTATGTCACAATACGCAAGGTTGCAGATGCAAGTCAGAAGGGTGGCGGTTCTGGTACTCAGCAAGTTGTCATCGAAGGGCCCTTATGTGAGGATTATTATAAAATTAGGGAACTTCTGTATTCACAATTTTATTTGCTGTAG

Coding sequence (CDS)

ATGGGAACCTCTGTTCAGGTGACGCCTCTTTGCGGGGTCTACAATGAAAACCCTCTATCATATTTGGTCTCCGTCGACGGCTTCAACTTCCTTATTGACTGTGGTTGGAACGACCACTTCGACCCTGCTCTTCTTCAACCTCTCTCCAGGGTGGCATCGACGATAGATGCAGTTTTGATATCACATCCTGATACACTTCACCTTGGTGCCCTTCCTTATGCCATGAAACAGCTTGGACTTGCTGCTCCAGTTTTTTCCACTGAACCCGTGTATCGATTGGGCCTTCTTACAATGTATGATCAGTATATTGCTAGGAAGCAAGTATCGGAGTTTGATCTATTTACATTGGATGATATCGATTCTGCTTTCCAAGTTGTAACCAGACTAACATACTCCCAGAATCATCATCTTTCAGGCAAAGGAGAGGGAATAGTTATTGCACCTCACGTGGCTGGGCATCTTTTGGGGGGAACCCTATGGAAGATAACTAAGGATGGAGAAGATGTTATATATGCTGTTGACTTCAACCACCGCAAGGAAAGGCATCTGAACGGAACCATTTTAGAGTCATTTGTGCGACCTGCTGTATTGATAACTGATGCTTATAATGCTCTAAATAATCAACCTTACAGACGCCAAAAGGACAAAGAATTCGGAGATACTATCCAGAAGACCTTAAGAGCTAATGGAAATGTGTTACTTCCTGTTGATACTGCTGGGCGAGTGTTGGAGCTTATTCAAATTTTGGAATGGTACTGGGAAGAAGAAAGTTTAAATTATCCCATCTACTTTTTAACTTATGTTTCATCAAGCACAATTGATTATATCAAGAGTTTCCTGGAGTGGATGAGTGATACAATAGCAAAGTCTTTTGAACACACACGGAACAATGCTTTTCTTCTCAAGCATGTGACCCTTCTAATCAATAAAAGTGAACTTGATAATGCTCCAGATGGTCCAAAGGTTGTTCTAGCATCAATGGCTAGTTTGGAAGCTGGTTACTCACATGACATTTTTGTTGAGTGGGCAAATGATGCCAAAAATCTCGTGCTTTTTTCTGAGAAAGGCCAGTTTGCCACTTTGGCTCGTATGCTTCAAGCAGATCCACCTCCAAAAGCTGTTAAGGTAACTGTGTCTAAGAGAGTTCCTTTGGCTGGAGACGAGCTACTTGCTTATGAAGAAGAGCAAAACAGGAAAAAGGAAGAAGCTCTTAAGGCTAGTTTGCTCAAGGAGGAACAATCCAAAGCATCTCATGGAACTGATAATGATACTGGTGATCCAATGATCATTGATGCTAGCAGTAATGCATCACCAGATGTAGGTGGTTCACATGTAAGTGCATATCGAGATATATTAATTGATGGCTTCGTTCCTCCTTCAACAAGCGTTGCTCCAATGTTTCCCTTTTATGAAAACACTTCCGAATGGGATGATTTTGGTGAAGTAATAAATCCTGATGATTATGTAATTAAGGATGAAGACATGGACCAAGCAGCGATGCATGCTGGTGGGGACGTGGATGGAAAACTAGATGAAACTGCTGCTAACCTGATCCTGGATATGAAGCCTTCAAAAGTTGTATCTAACGAATTGACAGTCCAAGTGAAATGTTCATTGCATTACATGGATTTTGAAGGTCGTTCAGATGGGAGATCAATTAAATCAATACTCTCCCACGTTGCTCCCTTGAAGCTTGTTTTGGTGCATGGAACTGCTGAGGCCACTGAGCATCTTAAGCAACATTGCCTAAAAAACGTCTGTCCCCATGTCTATGCCCCCCAAATTGAAGAGACGATTGATGTGACTTCTGATCTGTGTGCATATAAGGTACAACTTTCAGAGAAACTGATGAGTAATGTGCTGTTCAAGAAGCTTGGAGATTATGAAATCGCTTGGCTTGATGCTGAAGTAGGGAAGACTGAGAATGGAACGTTGTCTTTACTTCCCCTCTCAAAGGCTGCTTTGCCTCATAAATCTGTTCTTGTTGGTGACTTAAAGATGGCTGACTACAAACAATTTCTTGCCAGCAAGGGAATACAGGTGGAATTTGCTGGGGGTGCTTTGAGATGCGGTGAGTATGTCACAATACGCAAGGTTGCAGATGCAAGTCAGAAGGGTGGCGGTTCTGGTACTCAGCAAGTTGTCATCGAAGGGCCCTTATGTGAGGATTATTATAAAATTAGGGAACTTCTGTATTCACAATTTTATTTGCTGTAG

Protein sequence

MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDIDSAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFATLARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGTDNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFGEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL

Homology

[Close]

BLAST of Moc10g01420 vs. NCBI nr
Match: XP_022141034.1 (cleavage and polyadenylation specificity factor subunit 2 isoform X1 [Momordica charantia])

HSP 1 Score: 1478.4 bits (3826), Expect = 0.0e+00
Identity = 738/738 (100.00%), Postives = 738/738 (100.00%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420

Query: 421 DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG
Sbjct: 421 DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660

Query: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720
           LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL
Sbjct: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720

Query: 721 CEDYYKIRELLYSQFYLL 739
           CEDYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 738

[Close]

BLAST of Moc10g01420 vs. NCBI nr
Match: XP_022141035.1 (cleavage and polyadenylation specificity factor subunit 2 isoform X2 [Momordica charantia])

HSP 1 Score: 1472.2 bits (3810), Expect = 0.0e+00
Identity = 737/738 (99.86%), Postives = 737/738 (99.86%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420

Query: 421 DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DNDTGDPMIIDASSNASPD GGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG
Sbjct: 421 DNDTGDPMIIDASSNASPD-GGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660

Query: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720
           LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL
Sbjct: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720

Query: 721 CEDYYKIRELLYSQFYLL 739
           CEDYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 737

[Close]

BLAST of Moc10g01420 vs. NCBI nr
Match: XP_022141036.1 (cleavage and polyadenylation specificity factor subunit 2 isoform X3 [Momordica charantia])

HSP 1 Score: 1469.1 bits (3802), Expect = 0.0e+00
Identity = 736/738 (99.73%), Postives = 736/738 (99.73%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQVVTRLTYSQNHHLS  GEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLS--GEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420

Query: 421 DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG
Sbjct: 421 DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660

Query: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720
           LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL
Sbjct: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720

Query: 721 CEDYYKIRELLYSQFYLL 739
           CEDYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 736

[Close]

BLAST of Moc10g01420 vs. NCBI nr
Match: XP_008439247.1 (PREDICTED: cleavage and polyadenylation specificity factor subunit 2 [Cucumis melo])

HSP 1 Score: 1440.6 bits (3728), Expect = 0.0e+00
Identity = 714/738 (96.75%), Postives = 726/738 (98.37%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVD FNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGL+APVFSTEPVYRLGLLTMYDQ+IARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQV+TRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPI+FLTYV+SSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFV+WA DAKNLVLFSE+GQF T
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKVTVSKRVPL GDEL+AYEEEQNRKKEEALKASLLKEEQSKASHG 
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420

Query: 421 DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DNDTGDPMIIDASSNA+PDVG SH  AYRDILIDGFVPPSTSVAPMFPFYENTS WDDFG
Sbjct: 421 DNDTGDPMIIDASSNAAPDVGSSHGGAYRDILIDGFVPPSTSVAPMFPFYENTSAWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQ+EETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQVEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKA  PHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAPAPHKSV 660

Query: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720
           LVGDLKMAD+KQFLASKGIQVEFAGGALRCGEYVT+RKV DASQKGGGSGTQQVVIEGPL
Sbjct: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGPL 720

Query: 721 CEDYYKIRELLYSQFYLL 739
           CEDYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 738

[Close]

BLAST of Moc10g01420 vs. NCBI nr
Match: XP_038899782.1 (cleavage and polyadenylation specificity factor subunit 2 [Benincasa hispida])

HSP 1 Score: 1437.6 bits (3720), Expect = 0.0e+00
Identity = 714/738 (96.75%), Postives = 725/738 (98.24%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGL+APVFSTEPVYRLGLLTMYDQ+IARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPI+FLTYV+SSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFV+WA DAKNLVLFSE+GQF T
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKVTVSKRVPL GDEL+AYEEEQNRKKEEALKASLLKEEQSKASHGT
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGT 420

Query: 421 DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DND GDPMIIDASSN +PDVGGSH  A+RDILIDGFVPP TSVAPMFPFYENTS WDDFG
Sbjct: 421 DNDAGDPMIIDASSNVAPDVGGSHGGAFRDILIDGFVPPLTSVAPMFPFYENTSTWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTEN TLSLLPLSKAA PHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENETLSLLPLSKAASPHKSV 660

Query: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720
           LVGDLKMAD+KQFLASKGIQVEFAGGALRCGEYVT+RKV DASQKGGGSGT QVVIEGPL
Sbjct: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTHQVVIEGPL 720

Query: 721 CEDYYKIRELLYSQFYLL 739
           CEDYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 738

[Close]

BLAST of Moc10g01420 vs. ExPASy Swiss-Prot
Match: Q9LKF9 (Cleavage and polyadenylation specificity factor subunit 2 OS=Arabidopsis thaliana OX=3702 GN=CPSF100 PE=1 SV=2)

HSP 1 Score: 1196.4 bits (3094), Expect = 0.0e+00
Identity = 584/741 (78.81%), Postives = 673/741 (90.82%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVS+DGFNFLIDCGWND FD +LL+PLSRVASTIDAVL+
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120
           SHPDTLH+GALPYAMKQLGL+APV++TEPV+RLGLLTMYDQ+++RKQVS+FDLFTLDDID
Sbjct: 61  SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQ V RLTYSQN+HLSGKGEGIVIAPHVAGH+LGG++W+ITKDGEDVIYAVD+NHRKE
Sbjct: 121 SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNAL-NNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           RHLNGT+L+SFVRPAVLITDAY+AL  NQ  R+Q+DKEF DTI K L   GNVLLPVDTA
Sbjct: 181 RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240

Query: 241 GRVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAF 300
           GRVLEL+ ILE +W +   ++PIYFLTYVSSSTIDY+KSFLEWMSD+I+KSFE +R+NAF
Sbjct: 241 GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300

Query: 301 LLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFA 360
           LL+HVTLLINK++LDNAP GPKVVLASMASLEAG++ +IFVEWAND +NLVLF+E GQF 
Sbjct: 301 LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360

Query: 361 TLARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNR-KKEEALKASLLKEEQSKASH 420
           TLARMLQ+ PPPK VKVT+SKRVPLAG+EL+AYEEEQNR K+EEAL+ASL+KEE++KASH
Sbjct: 361 TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420

Query: 421 GTDNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDD 480
           G+D+++ +PMIID  +  + DV GSH  AY+DILIDGFVPPS+SVAPMFP+Y+NTSEWDD
Sbjct: 421 GSDDNSSEPMIID--TKTTHDVIGSHGPAYKDILIDGFVPPSSSVAPMFPYYDNTSEWDD 480

Query: 481 FGEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCS 540
           FGE+INPDDYVIKDEDMD+ AMH GGDVDG+LDE  A+L+LD +PSKV+SNEL V V CS
Sbjct: 481 FGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVMSNELIVTVSCS 540

Query: 541 LHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEET 600
           L  MD+EGRSDGRSIKS+++HV+PLKLVLVH  AEATEHLKQHCL N+CPHVYAPQIEET
Sbjct: 541 LVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEET 600

Query: 601 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHK 660
           +DVTSDLCAYKVQLSEKLMSNV+FKKLGD E+AW+D+EVGKTE    SLLP+  AA PHK
Sbjct: 601 VDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTERDMRSLLPMPGAASPHK 660

Query: 661 SVLVGDLKMADYKQFLASKGIQVEFA-GGALRCGEYVTIRKVADASQKGGGSGTQQVVIE 720
            VLVGDLK+AD+KQFL+SKG+QVEFA GGALRCGEYVT+RKV    QKGG SG QQ++IE
Sbjct: 661 PVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILIE 720

Query: 721 GPLCEDYYKIRELLYSQFYLL 739
           GPLCEDYYKIR+ LYSQFYLL
Sbjct: 721 GPLCEDYYKIRDYLYSQFYLL 739

[Close]

BLAST of Moc10g01420 vs. ExPASy Swiss-Prot
Match: Q652P4 (Cleavage and polyadenylation specificity factor subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0569400 PE=2 SV=1)

HSP 1 Score: 1109.4 bits (2868), Expect = 0.0e+00
Identity = 550/740 (74.32%), Postives = 636/740 (85.95%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPL G Y E PL YL++VDGF FL+DCGW D  DP+ LQPL++VA TIDAVL+
Sbjct: 1   MGTSVQVTPLSGAYGEGPLCYLLAVDGFRFLLDCGWTDLCDPSHLQPLAKVAPTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120
           SH DT+HLGALPYAMK LGL+APV++TEPV+RLG+LT+YD +I+R+QVS+FDLFTLDDID
Sbjct: 61  SHADTMHLGALPYAMKHLGLSAPVYATEPVFRLGILTLYDYFISRRQVSDFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           +AFQ V RL YSQNH L+ KGEGIVIAPHVAGH LGGT+WKITKDGEDV+YAVDFNHRKE
Sbjct: 121 AAFQNVVRLKYSQNHLLNDKGEGIVIAPHVAGHDLGGTVWKITKDGEDVVYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGT L SFVRPAVLITDAYNALNN  Y+RQ+D++F D + K L   G+VLLP+DTAG
Sbjct: 181 RHLNGTALGSFVRPAVLITDAYNALNNHVYKRQQDQDFIDALVKVLTGGGSVLLPIDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLE++ ILE YW +  L YPIYFLT VS+ST+DY+KSFLEWM+D+I+KSFEHTR+NAFL
Sbjct: 241 RVLEILLILEQYWAQRHLIYPIYFLTNVSTSTVDYVKSFLEWMNDSISKSFEHTRDNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360
           LK VT +INK EL+   D PKVVLASMASLE G+SHDIFV+ AN+AKNLVLF+EKGQF T
Sbjct: 301 LKCVTQIINKDELEKLGDAPKVVLASMASLEVGFSHDIFVDMANEAKNLVLFTEKGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNR-KKEEALKASLLKEEQSKASHG 420
           LARMLQ DPPPKAVKVT+SKR+PL GDEL AYEEEQ R KKEEALKASL KEE+ KAS G
Sbjct: 361 LARMLQVDPPPKAVKVTMSKRIPLVGDELKAYEEEQERIKKEEALKASLNKEEEKKASLG 420

Query: 421 TDNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDF 480
           ++    DPM+IDAS++  P   GS      DILIDGFVPPS+SVAPMFPF+ENTSEWDDF
Sbjct: 421 SNAKASDPMVIDASTSRKPSNAGSKFGGNVDILIDGFVPPSSSVAPMFPFFENTSEWDDF 480

Query: 481 GEVINPDDYVIKDEDMDQAAMHAGGD-VDGKLDETAANLILDMKPSKVVSNELTVQVKCS 540
           GEVINP+DY++K E+MD   M   GD +D  LDE +A L+LD  PSKV+SNE+TVQVKCS
Sbjct: 481 GEVINPEDYLMKQEEMDNTLMPGAGDGMDSMLDEGSARLLLDSTPSKVISNEMTVQVKCS 540

Query: 541 LHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEET 600
           L YMDFEGRSDGRS+KS+++HVAPLKLVLVHG+AEATEHLK HC KN   HVYAPQIEET
Sbjct: 541 LAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCSKNSDLHVYAPQIEET 600

Query: 601 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHK 660
           IDVTSDLCAYKVQLSEKLMSNV+ KKLG++EIAW+DAEVGKT++  L+LLP S     HK
Sbjct: 601 IDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGKTDD-KLTLLPPSSTPAAHK 660

Query: 661 SVLVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEG 720
           SVLVGDLK+AD+KQFLA+KG+QVEFAGGALRCGEY+T+RK+ DA QK G +G+QQ+VIEG
Sbjct: 661 SVLVGDLKLADFKQFLANKGLQVEFAGGALRCGEYITLRKIGDAGQK-GSTGSQQIVIEG 720

Query: 721 PLCEDYYKIRELLYSQFYLL 739
           PLCEDYYKIRELLYSQFYLL
Sbjct: 721 PLCEDYYKIRELLYSQFYLL 738

[Close]

BLAST of Moc10g01420 vs. ExPASy Swiss-Prot
Match: Q9V3D6 (Probable cleavage and polyadenylation specificity factor subunit 2 OS=Drosophila melanogaster OX=7227 GN=Cpsf100 PE=1 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 7.0e-152
Identity = 300/779 (38.51%), Postives = 456/779 (58.54%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           M + +++  + G  +E+P  Y++ +D    L+DCGW++ FD   ++ L R   T+DAVL+
Sbjct: 1   MTSIIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120
           SHPD  HLGALPY + +LGL  P+++T PV+++G + MYD Y++   + +FDLF+LDD+D
Sbjct: 61  SHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVD 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDG-EDVIYAVDFNHRK 180
           +AF+ +T+L Y+Q   L  KG GI I P  AGH++GGT+WKI K G ED++YA DFNH+K
Sbjct: 121 TAFEKITQLKYNQTVSLKDKGYGISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKK 180

Query: 181 ERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           ERHL+G  L+   RP++LITDAYNA   Q  RR +D++    I +T+R NGNVL+ VDTA
Sbjct: 181 ERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTA 240

Query: 241 GRVLELIQILEWYWEEES---LNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRN 300
           GRVLEL  +L+  W+ +    + Y +  L  VS + I++ KS +EWMSD + K+FE  RN
Sbjct: 241 GRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARN 300

Query: 301 NAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKG 360
           N F  KH+ L  + +++   P GPKVVLAS   LE+G++ D+FV+WA++A N ++ + + 
Sbjct: 301 NPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRT 360

Query: 361 QFATLA-RMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSK 420
              TLA  +++   P K +++ V +RV L G EL    EE  R + E L   ++K +  +
Sbjct: 361 SPGTLAMELVENCAPGKQIELDVRRRVDLEGAEL----EEYLRTQGEKLNPLIVKPDVEE 420

Query: 421 ASHGTDNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSE 480
            S     D  +  +I    +      G H S        GF   +     MFP++E   +
Sbjct: 421 ESSSESEDDIEMSVITGKHDIVVRPEGRHHS--------GFFKSNKRHHVMFPYHEEKVK 480

Query: 481 WDDFGEVINPDDYVIKDE----------------DMDQAAMHAGGDVDGKLDETAANLIL 540
            D++GE+IN DDY I D                   ++  + A    +G + +    L+ 
Sbjct: 481 CDEYGEIINLDDYRIADATGYEFVPMEEQNKENVKKEEPGIGAEQQANGGIVDNDVQLL- 540

Query: 541 DMKPSKVVSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLK 600
             KP+K++S   T++V   +  +DFEGRSDG S+  ILS + P +++++HGTAE T+ + 
Sbjct: 541 -EKPTKLISQRKTIEVNAQVQRIDFEGRSDGESMLKILSQLRPRRVIVIHGTAEGTQVVA 600

Query: 601 QHCLKNVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGK 660
           +HC +NV   V+ PQ  E IDVTS++  Y+V+L+E L+S + F+K  D E+AW+D  +G 
Sbjct: 601 RHCEQNVGARVFTPQKGEIIDVTSEIHIYQVRLTEGLVSQLQFQKGKDAEVAWVDGRLGM 660

Query: 661 -------------------TENGTLSLLPLSKAALP-HKSVLVGDLKMADYKQFLASKGI 720
                               E  TL+L  L+   +P H SVL+ +LK++D+KQ L    I
Sbjct: 661 RVKAIEAPMDVTVEQDASVQEGKTLTLETLADDEIPIHNSVLINELKLSDFKQTLMRNNI 720

Query: 721 QVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 739
             EF+GG L C       +  DA          +V +EG L E+YYKIRELLY Q+ ++
Sbjct: 721 NSEFSGGVLWCSNGTLALRRVDAG---------KVAMEGCLSEEYYKIRELLYEQYAIV 756

[Close]

BLAST of Moc10g01420 vs. ExPASy Swiss-Prot
Match: Q10568 (Cleavage and polyadenylation specificity factor subunit 2 OS=Bos taurus OX=9913 GN=CPSF2 PE=1 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 5.9e-151
Identity = 304/813 (37.39%), Postives = 472/813 (58.06%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           M + +++T L GV  E+ L YL+ VD F FL+DCGW++HF   ++  L +    IDAVL+
Sbjct: 1   MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120
           SHPD LHLGALPYA+ +LGL   +++T PVY++G + MYD Y +R    +F LFTLDD+D
Sbjct: 61  SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDG-EDVIYAVDFNHRK 180
           +AF  + +L +SQ  +L GKG G+ I P  AGH++GGT+WKI KDG E+++YAVDFNH++
Sbjct: 121 AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR 180

Query: 181 ERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           E HLNG  LE   RP++LITD++NA   QP R+Q+D++    + +TLR +GNVL+ VDTA
Sbjct: 181 EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA 240

Query: 241 GRVLELIQILEWYWEEESLNYPIY---FLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRN 300
           GRVLEL Q+L+  W  +     +Y    L  VS + +++ KS +EWMSD + + FE  RN
Sbjct: 241 GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN 300

Query: 301 NAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKG 360
           N F  +H++L    S+L   P  PKVVLAS   LE G+S D+F++W  D KN ++ + + 
Sbjct: 301 NPFQFRHLSLCHGLSDLARVP-SPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRT 360

Query: 361 QFATLARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKA 420
              TLAR L  +P  K  ++ + KRV L G EL  Y E++  KKE A K      EQSK 
Sbjct: 361 TPGTLARFLIDNPSEKVTEIELRKRVKLEGKELEEYLEKEKLKKEAAKKL-----EQSKE 420

Query: 421 SHGTDNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDG-------FVPPSTSVAPMFPF 480
           +   D D+ D    ++ +    D   +H + + D+++ G       F   +    PMFP 
Sbjct: 421 A---DIDSSD----ESDAEEDIDQPSAHKTKH-DLMMKGEGSRKGSFFKQAKKSYPMFPA 480

Query: 481 YENTSEWDDFGEVINPDDYVIKD---EDMDQAAMHAG-GDVDGKLDETAANLILDMKPSK 540
            E   +WD++GE+I P+D+++ +    + +++ + +G  + D  +D+  +++     P+K
Sbjct: 481 PEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDV-----PTK 540

Query: 541 VVSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCL-- 600
            +S   ++++K  + Y+D+EGRSDG SIK I++ + P +L++VHG  EA++ L + C   
Sbjct: 541 CISTTESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAF 600

Query: 601 --KNVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAW----LDAEV 660
             K++   VY P++ ET+D TS+   Y+V+L + L+S++ F K  D E+AW    LD  V
Sbjct: 601 GGKDI--KVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRV 660

Query: 661 GKTENGTL---------------------------------------------------S 720
            K + G +                                                   +
Sbjct: 661 SKVDTGVILEEGELKDDGEDSEMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPT 720

Query: 721 LLPLSKAALP-HKSVLVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQK 739
           L PL    +P H+SV + + +++D+KQ L  +GIQ EF GG L C   V +R+       
Sbjct: 721 LEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRR------- 780

[Close]

BLAST of Moc10g01420 vs. ExPASy Swiss-Prot
Match: Q9P2I0 (Cleavage and polyadenylation specificity factor subunit 2 OS=Homo sapiens OX=9606 GN=CPSF2 PE=1 SV=2)

HSP 1 Score: 536.2 bits (1380), Expect = 5.9e-151
Identity = 305/813 (37.52%), Postives = 471/813 (57.93%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           M + +++T L GV  E+ L YL+ VD F FL+DCGW++HF   ++  L +    IDAVL+
Sbjct: 1   MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120
           SHPD LHLGALPYA+ +LGL   +++T PVY++G + MYD Y +R    +F LFTLDD+D
Sbjct: 61  SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDG-EDVIYAVDFNHRK 180
           +AF  + +L +SQ  +L GKG G+ I P  AGH++GGT+WKI KDG E+++YAVDFNH++
Sbjct: 121 AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR 180

Query: 181 ERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           E HLNG  LE   RP++LITD++NA   QP R+Q+D++    + +TLR +GNVL+ VDTA
Sbjct: 181 EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA 240

Query: 241 GRVLELIQILEWYWEEESLNYPIY---FLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRN 300
           GRVLEL Q+L+  W  +     +Y    L  VS + +++ KS +EWMSD + + FE  RN
Sbjct: 241 GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN 300

Query: 301 NAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKG 360
           N F  +H++L    S+L   P  PKVVLAS   LE G+S D+F++W  D KN ++ + + 
Sbjct: 301 NPFQFRHLSLCHGLSDLARVP-SPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRT 360

Query: 361 QFATLARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKA 420
              TLAR L  +P  K  ++ + KRV L G EL  Y E++  KKE A K      EQSK 
Sbjct: 361 TPGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKL-----EQSKE 420

Query: 421 SHGTDNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDG-------FVPPSTSVAPMFPF 480
           +   D D+ D   I+       D   +H + + D+++ G       F   +    PMFP 
Sbjct: 421 A---DIDSSDESDIEEDI----DQPSAHKTKH-DLMMKGEGSRKGSFFKQAKKSYPMFPA 480

Query: 481 YENTSEWDDFGEVINPDDYVIKD---EDMDQAAMHAG-GDVDGKLDETAANLILDMKPSK 540
            E   +WD++GE+I P+D+++ +    + +++ + +G  + D  +D+  +++     P+K
Sbjct: 481 PEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDV-----PTK 540

Query: 541 VVSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCL-- 600
            +S   ++++K  + Y+D+EGRSDG SIK I++ + P +L++VHG  EA++ L + C   
Sbjct: 541 CISTTESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAF 600

Query: 601 --KNVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAW----LDAEV 660
             K++   VY P++ ET+D TS+   Y+V+L + L+S++ F K  D E+AW    LD  V
Sbjct: 601 GGKDI--KVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRV 660

Query: 661 GKTENGTL---------------------------------------------------S 720
            K + G +                                                   +
Sbjct: 661 SKVDTGVILEEGELKDDGEDSEMQVEAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPT 720

Query: 721 LLPLSKAALP-HKSVLVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQK 739
           L PL    +P H+SV + + +++D+KQ L  +GIQ EF GG L C   V +R+       
Sbjct: 721 LEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRR------- 780

[Close]

BLAST of Moc10g01420 vs. ExPASy TrEMBL
Match: A0A6J1CHF7 (Cleavage and polyadenylation specificity factor subunit 2 OS=Momordica charantia OX=3673 GN=LOC111011537 PE=3 SV=1)

HSP 1 Score: 1478.4 bits (3826), Expect = 0.0e+00
Identity = 738/738 (100.00%), Postives = 738/738 (100.00%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420

Query: 421 DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG
Sbjct: 421 DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660

Query: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720
           LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL
Sbjct: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720

Query: 721 CEDYYKIRELLYSQFYLL 739
           CEDYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 738

[Close]

BLAST of Moc10g01420 vs. ExPASy TrEMBL
Match: A0A6J1CGU1 (Cleavage and polyadenylation specificity factor subunit 2 OS=Momordica charantia OX=3673 GN=LOC111011537 PE=3 SV=1)

HSP 1 Score: 1472.2 bits (3810), Expect = 0.0e+00
Identity = 737/738 (99.86%), Postives = 737/738 (99.86%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420

Query: 421 DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DNDTGDPMIIDASSNASPD GGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG
Sbjct: 421 DNDTGDPMIIDASSNASPD-GGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660

Query: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720
           LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL
Sbjct: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720

Query: 721 CEDYYKIRELLYSQFYLL 739
           CEDYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 737

[Close]

BLAST of Moc10g01420 vs. ExPASy TrEMBL
Match: A0A6J1CHT3 (Cleavage and polyadenylation specificity factor subunit 2 OS=Momordica charantia OX=3673 GN=LOC111011537 PE=3 SV=1)

HSP 1 Score: 1469.1 bits (3802), Expect = 0.0e+00
Identity = 736/738 (99.73%), Postives = 736/738 (99.73%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQVVTRLTYSQNHHLS  GEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLS--GEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420

Query: 421 DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG
Sbjct: 421 DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660

Query: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720
           LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL
Sbjct: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720

Query: 721 CEDYYKIRELLYSQFYLL 739
           CEDYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 736

[Close]

BLAST of Moc10g01420 vs. ExPASy TrEMBL
Match: A0A1S3AXY2 (Cleavage and polyadenylation specificity factor subunit 2 OS=Cucumis melo OX=3656 GN=LOC103484088 PE=3 SV=1)

HSP 1 Score: 1440.6 bits (3728), Expect = 0.0e+00
Identity = 714/738 (96.75%), Postives = 726/738 (98.37%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVD FNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGL+APVFSTEPVYRLGLLTMYDQ+IARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQV+TRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPI+FLTYV+SSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFV+WA DAKNLVLFSE+GQF T
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKVTVSKRVPL GDEL+AYEEEQNRKKEEALKASLLKEEQSKASHG 
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420

Query: 421 DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DNDTGDPMIIDASSNA+PDVG SH  AYRDILIDGFVPPSTSVAPMFPFYENTS WDDFG
Sbjct: 421 DNDTGDPMIIDASSNAAPDVGSSHGGAYRDILIDGFVPPSTSVAPMFPFYENTSAWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQ+EETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQVEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKA  PHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAPAPHKSV 660

Query: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720
           LVGDLKMAD+KQFLASKGIQVEFAGGALRCGEYVT+RKV DASQKGGGSGTQQVVIEGPL
Sbjct: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGPL 720

Query: 721 CEDYYKIRELLYSQFYLL 739
           CEDYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 738

[Close]

BLAST of Moc10g01420 vs. ExPASy TrEMBL
Match: A0A0A0LBF9 (Cleavage and polyadenylation specificity factor subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_3G182220 PE=3 SV=1)

HSP 1 Score: 1436.8 bits (3718), Expect = 0.0e+00
Identity = 713/738 (96.61%), Postives = 723/738 (97.97%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVD FNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGL+APVFSTEPVYRLGLLTMYDQ+IARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPI+FLTYV+SSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFAT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFV+WA DAKNLVLFSE+GQF T
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKVTVSKRVPL GDEL+AYEEEQNRKKEEALKASLLKEEQSKASHG 
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420

Query: 421 DNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDDFG 480
           DNDTGDPMIIDASSN +PDVG SH  AYRDILIDGFVPPST VAPMFPFYENTS WDDFG
Sbjct: 421 DNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEI WLDAEVGKTENGTLSLLPLSKA  PHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKSV 660

Query: 661 LVGDLKMADYKQFLASKGIQVEFAGGALRCGEYVTIRKVADASQKGGGSGTQQVVIEGPL 720
           LVGDLKMAD+KQFLASKGIQVEFAGGALRCGEYVT+RKV DASQKGGGSGTQQVVIEGPL
Sbjct: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGPL 720

Query: 721 CEDYYKIRELLYSQFYLL 739
           CEDYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 738

[Close]

BLAST of Moc10g01420 vs. TAIR 10
Match: AT5G23880.1 (cleavage and polyadenylation specificity factor 100 )

HSP 1 Score: 1196.4 bits (3094), Expect = 0.0e+00
Identity = 584/741 (78.81%), Postives = 673/741 (90.82%), Query Frame = 0


Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVS+DGFNFLIDCGWND FD +LL+PLSRVASTIDAVL+
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLAAPVFSTEPVYRLGLLTMYDQYIARKQVSEFDLFTLDDID 120
           SHPDTLH+GALPYAMKQLGL+APV++TEPV+RLGLLTMYDQ+++RKQVS+FDLFTLDDID
Sbjct: 61  SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQ V RLTYSQN+HLSGKGEGIVIAPHVAGH+LGG++W+ITKDGEDVIYAVD+NHRKE
Sbjct: 121 SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNAL-NNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           RHLNGT+L+SFVRPAVLITDAY+AL  NQ  R+Q+DKEF DTI K L   GNVLLPVDTA
Sbjct: 181 RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240

Query: 241 GRVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAF 300
           GRVLEL+ ILE +W +   ++PIYFLTYVSSSTIDY+KSFLEWMSD+I+KSFE +R+NAF
Sbjct: 241 GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300

Query: 301 LLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFA 360
           LL+HVTLLINK++LDNAP GPKVVLASMASLEAG++ +IFVEWAND +NLVLF+E GQF 
Sbjct: 301 LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360

Query: 361 TLARMLQADPPPKAVKVTVSKRVPLAGDELLAYEEEQNR-KKEEALKASLLKEEQSKASH 420
           TLARMLQ+ PPPK VKVT+SKRVPLAG+EL+AYEEEQNR K+EEAL+ASL+KEE++KASH
Sbjct: 361 TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420

Query: 421 GTDNDTGDPMIIDASSNASPDVGGSHVSAYRDILIDGFVPPSTSVAPMFPFYENTSEWDD 480
           G+D+++ +PMIID  +  + DV GSH  AY+DILIDGFVPPS+SVAPMFP+Y+NTSEWDD
Sbjct: 421 GSDDNSSEPMIID--TKTTHDVIGSHGPAYKDILIDGFVPPSSSVAPMFPYYDNTSEWDD 480

Query: 481 FGEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCS 540
           FGE+INPDDYVIKDEDMD+ AMH GGDVDG+LDE  A+L+LD +PSKV+SNEL V V CS
Sbjct: 481 FGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVMSNELIVTVSCS 540

Query: 541 LHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEET 600
           L  MD+EGRSDGRSIKS+++HV+PLKLVLVH  AEATEHLKQHCL N+CPHVYAPQIEET
Sbjct: 541 LVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEET 600

Query: 601 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAALPHK 660
           +DVTSDLCAYKVQLSEKLMSNV+FKKLGD E+AW+D+EVGKTE    SLLP+  AA PHK
Sbjct: 601 VDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTERDMRSLLPMPGAASPHK 660

Query: 661 SVLVGDLKMADYKQFLASKGIQVEFA-GGALRCGEYVTIRKVADASQKGGGSGTQQVVIE 720
            VLVGDLK+AD+KQFL+SKG+QVEFA GGALRCGEYVT+RKV    QKGG SG QQ++IE
Sbjct: 661 PVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILIE 720

Query: 721 GPLCEDYYKIRELLYSQFYLL 739
           GPLCEDYYKIR+ LYSQFYLL
Sbjct: 721 GPLCEDYYKIRDYLYSQFYLL 739

[Close]

BLAST of Moc10g01420 vs. TAIR 10
Match: AT2G01730.1 (cleavage and polyadenylation specificity factor 73 kDa subunit-II )

HSP 1 Score: 134.0 bits (336), Expect = 4.8e-31
Identity = 93/357 (26.05%), Postives = 164/357 (45.94%), Query Frame = 0


Query: 22  LVSVDGFNFLIDCGW-------NDHFDPALLQPLSRVASTIDAVLISHPDTLHLGALPYA 81
           +V+++G   + DCG        N + + +L+       + I  ++I+H    H+GALPY 
Sbjct: 20  VVTINGKKIMFDCGMHMGCDDHNRYPNFSLISKSGDFDNAISCIIITHFHMDHVGALPYF 79

Query: 82  MKQLGLAAPVFSTEPVYRLGLLTMYD-QYIARKQVSEFDLFTLDDIDSAFQVVTRLTYSQ 141
            +  G   P++ + P   L  L + D + +   +  E +LFT   I +  + V  +   Q
Sbjct: 80  TEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEELFTTTHIANCMKKVIAIDLKQ 139

Query: 142 NHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILESFVR 201
              +    E + I  + AGH+LG  +         ++Y  D+N   +RHL    ++  ++
Sbjct: 140 TIQVD---EDLQIRAYYAGHVLGAVMVYAKMGDAAIVYTGDYNMTTDRHLGAAKIDR-LQ 199

Query: 202 PAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILEWYW 261
             +LI+++  A   +  +  +++EF   + K +   G  L+P    GR  EL  +L+ YW
Sbjct: 200 LDLLISESTYATTIRGSKYPREREFLQAVHKCVAGGGKALIPSFALGRAQELCMLLDDYW 259

Query: 262 EEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTIAKSFEHTRNNAFLLKHVTLLINKSEL 321
           E  ++  PIYF + ++     Y K  + W S  + +  +H  +N F  K+V        L
Sbjct: 260 ERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKE--KHNTHNPFDFKNVKDF--DRSL 319

Query: 322 DNAPDGPKVVLASMASLEAGYSHDIFVEWANDAKNLVLFSEKGQFATLARMLQADPP 371
            +AP GP V+ A+   L AG+S ++F  WA    NLV         T+   L A  P
Sbjct: 320 IHAP-GPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGHKLMAGKP 367

[Close]

BLAST of Moc10g01420 vs. TAIR 10
Match: AT3G07530.1 (CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73 kDa subunit-II (TAIR:AT2G01730.1); Has 624 Blast hits to 615 proteins in 160 species: Archae - 54; Bacteria - 6; Metazoa - 333; Fungi - 44; Plants - 93; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 5.9e-05
Identity = 36/138 (26.09%), Postives = 61/138 (44.20%), Query Frame = 0


Query: 228 ANGNVLLPVDTAGRVLELIQILEWYWEEESLNYPIYFLTYVSSSTIDYIKSFLEWMSDTI 287
           A G+ L+ +   G VL+L+++L    E  SL  PI+ ++ V+   + Y  +  EW+ +  
Sbjct: 343 AGGSTLITITRIGIVLQLLELLSNSLESSSLKVPIFVISSVAEELLAYTNTIPEWLCEQR 402

Query: 288 AK-------SFEHTRNNAFLLKHVTLLINKSELDNAP----DGPKVVLASMASLEAGYSH 347
            +       SF H +       H+   I+   L  A       P +V AS  SL  G S 
Sbjct: 403 QEKLISGEPSFGHLKFIKNKKIHLFPAIHSPNLIYANRTSWQEPCIVFASHWSLRLGPSV 462

Query: 348 DIFVEWANDAKNLVLFSE 355
            +   W  D K+L++  +
Sbjct: 463 QLLQRWRGDPKSLLVLED 480

[Close]

BLAST of Moc10g01420 vs. TAIR 10
Match: AT1G61010.1 (cleavage and polyadenylation specificity factor 73-I )

HSP 1 Score: 43.5 bits (101), Expect = 8.5e-04
Identity = 28/91 (30.77%), Postives = 42/91 (46.15%), Query Frame = 0


Query: 494 DMDQAAMHAGGDVDGKLDETAANLILDMKPSKV-VSNELTVQVKCSLHYMDFEGRSDGRS 553
           D   A +  G  V+G L +T  N     +P +V + N LT  +   +HY+ F   +D   
Sbjct: 357 DKKNACIIPGYMVEGTLAKTIIN-----EPKEVTLMNGLTAPLNMQVHYISFSAHADYAQ 416

Query: 554 IKSILSHVAPLKLVLVHGTAEATEHLKQHCL 584
             + L  + P  ++LVHG A     LKQ  L
Sbjct: 417 TSTFLKELMPPNIILVHGEANEMMRLKQKLL 442

[Close]

BLAST of Moc10g01420 vs. TAIR 10
Match: AT1G61010.2 (cleavage and polyadenylation specificity factor 73-I )

HSP 1 Score: 43.5 bits (101), Expect = 8.5e-04
Identity = 28/91 (30.77%), Postives = 42/91 (46.15%), Query Frame = 0


Query: 494 DMDQAAMHAGGDVDGKLDETAANLILDMKPSKV-VSNELTVQVKCSLHYMDFEGRSDGRS 553
           D   A +  G  V+G L +T  N     +P +V + N LT  +   +HY+ F   +D   
Sbjct: 357 DKKNACIIPGYMVEGTLAKTIIN-----EPKEVTLMNGLTAPLNMQVHYISFSAHADYAQ 416

Query: 554 IKSILSHVAPLKLVLVHGTAEATEHLKQHCL 584
             + L  + P  ++LVHG A     LKQ  L
Sbjct: 417 TSTFLKELMPPNIILVHGEANEMMRLKQKLL 442

The following BLAST results are available for this feature:

BLAST of Moc10g01420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141034.1	0.0e+00	100.00	cleavage and polyadenylation specificity factor subunit 2 isoform X1 [Momordica ...	[more]
XP_022141035.1	0.0e+00	99.86	cleavage and polyadenylation specificity factor subunit 2 isoform X2 [Momordica ...	[more]
XP_022141036.1	0.0e+00	99.73	cleavage and polyadenylation specificity factor subunit 2 isoform X3 [Momordica ...	[more]
XP_008439247.1	0.0e+00	96.75	PREDICTED: cleavage and polyadenylation specificity factor subunit 2 [Cucumis me...	[more]
XP_038899782.1	0.0e+00	96.75	cleavage and polyadenylation specificity factor subunit 2 [Benincasa hispida]	[more]

BLAST of Moc10g01420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LKF9	0.0e+00	78.81	Cleavage and polyadenylation specificity factor subunit 2 OS=Arabidopsis thalian...	[more]
Q652P4	0.0e+00	74.32	Cleavage and polyadenylation specificity factor subunit 2 OS=Oryza sativa subsp....	[more]
Q9V3D6	7.0e-152	38.51	Probable cleavage and polyadenylation specificity factor subunit 2 OS=Drosophila...	[more]
Q10568	5.9e-151	37.39	Cleavage and polyadenylation specificity factor subunit 2 OS=Bos taurus OX=9913 ...	[more]
Q9P2I0	5.9e-151	37.52	Cleavage and polyadenylation specificity factor subunit 2 OS=Homo sapiens OX=960...	[more]

BLAST of Moc10g01420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CHF7	0.0e+00	100.00	Cleavage and polyadenylation specificity factor subunit 2 OS=Momordica charantia...	[more]
A0A6J1CGU1	0.0e+00	99.86	Cleavage and polyadenylation specificity factor subunit 2 OS=Momordica charantia...	[more]
A0A6J1CHT3	0.0e+00	99.73	Cleavage and polyadenylation specificity factor subunit 2 OS=Momordica charantia...	[more]
A0A1S3AXY2	0.0e+00	96.75	Cleavage and polyadenylation specificity factor subunit 2 OS=Cucumis melo OX=365...	[more]
A0A0A0LBF9	0.0e+00	96.61	Cleavage and polyadenylation specificity factor subunit 2 OS=Cucumis sativus OX=...	[more]

BLAST of Moc10g01420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23880.1	0.0e+00	78.81	cleavage and polyadenylation specificity factor 100	[more]
AT2G01730.1	4.8e-31	26.05	cleavage and polyadenylation specificity factor 73 kDa subunit-II	[more]
AT3G07530.1	5.9e-05	26.09	CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712); BEST Arabidop...	[more]
AT1G61010.1	8.5e-04	30.77	cleavage and polyadenylation specificity factor 73-I	[more]
AT1G61010.2	8.5e-04	30.77	cleavage and polyadenylation specificity factor 73-I	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 392..412
IPR022712	Beta-Casp domain	SMART	SM01027	Beta_Casp_2	coord: 242..365 e-value: 6.0E-22 score: 88.9
IPR022712	Beta-Casp domain	PFAM	PF10996	Beta-Casp	coord: 242..365 e-value: 8.8E-18 score: 64.7
IPR025069	Cleavage and polyadenylation specificity factor 2, C-terminal	PFAM	PF13299	CPSF100_C	coord: 643..735 e-value: 8.1E-19 score: 68.4
IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	GENE3D	3.60.15.10		coord: 7..257 e-value: 3.3E-75 score: 254.4
IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	SUPERFAMILY	56281	Metallo-hydrolase/oxidoreductase	coord: 5..601
IPR011108	Zn-dependent metallo-hydrolase, RNA specificity domain	PFAM	PF07521	RMMBL	coord: 532..583 e-value: 2.0E-11 score: 43.7
IPR001279	Metallo-beta-lactamase	PFAM	PF16661	Lactamase_B_6	coord: 22..197 e-value: 7.1E-54 score: 182.2
IPR027075	Cleavage and polyadenylation specificity factor subunit 2	PANTHER	PTHR45922	CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2	coord: 1..737
IPR035639	CPSF2, metallo-hydrolase domain	CDD	cd16293	CPSF2-like_MBL-fold	coord: 8..203 e-value: 1.46942E-108 score: 326.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g01420.1	Moc10g01420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006398	mRNA 3'-end processing by stem-loop binding and cleavage
biological_process	GO:0006378	mRNA polyadenylation
biological_process	GO:0098789	pre-mRNA cleavage required for polyadenylation
biological_process	GO:0006508	proteolysis
biological_process	GO:0006379	mRNA cleavage
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005847	mRNA cleavage and polyadenylation specificity factor complex
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003723	RNA binding