Moc09g41730 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g41730
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Lipase maturation factor 2
Location	chr9: 31740423 .. 31740935 (-)
RNA-Seq Expression	Moc09g41730
Synteny	Moc09g41730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACATTCACTATCTTCAGTATCGGCCACTGCCAGAGCCAGAGCCACCCTCTCATGCTCAAGATTCAGCAGCTCACGATGTTCATGTTCATGTTCATGTCTGAGGCCGCCGTCTCGCAGCGACGCATGCACTGAAGCCCCACAAGACAACCTTCTCGTCTCCCGCAGGTAAAACCATTTGTTCCCTTCATTAGCAACATATGCTCATTTTCAGCTCATAACAATCTAACCAATGCCACATGGTTCAAATTGCAGGAACGCTGTCTTGCTCTCGACAGGAGCAATGCTGGCCCTGAATGTAGCTGAACGGAGTTCAGAGGCGGCTGCCAGAAGGCCGCCGCCCCCTCCTCCGCAAGAGAAGAAGGACCCCAATCTGAGTGGAGTGCAGGCAAAAGTACTAGCTAGCAAAAAGAGGAAGGAAGCCCTGAAAGAAGCTGTCGCCAAGCTGAGAGAGAAAGGGAAGCCTGTTGTTAAACAGCCACCACCTGAGGCTAAGGCTGAGGCTGAATAG

mRNA sequence

ATGGCACATTCACTATCTTCAGTATCGGCCACTGCCAGAGCCAGAGCCACCCTCTCATGCTCAAGATTCAGCAGCTCACGATGTTCATGTTCATGTTCATGTCTGAGGCCGCCGTCTCGCAGCGACGCATGCACTGAAGCCCCACAAGACAACCTTCTCGTCTCCCGCAGGAACGCTGTCTTGCTCTCGACAGGAGCAATGCTGGCCCTGAATGTAGCTGAACGGAGTTCAGAGGCGGCTGCCAGAAGGCCGCCGCCCCCTCCTCCGCAAGAGAAGAAGGACCCCAATCTGAGTGGAGTGCAGGCAAAAGTACTAGCTAGCAAAAAGAGGAAGGAAGCCCTGAAAGAAGCTGTCGCCAAGCTGAGAGAGAAAGGGAAGCCTGTTGTTAAACAGCCACCACCTGAGGCTAAGGCTGAGGCTGAATAG

Coding sequence (CDS)

ATGGCACATTCACTATCTTCAGTATCGGCCACTGCCAGAGCCAGAGCCACCCTCTCATGCTCAAGATTCAGCAGCTCACGATGTTCATGTTCATGTTCATGTCTGAGGCCGCCGTCTCGCAGCGACGCATGCACTGAAGCCCCACAAGACAACCTTCTCGTCTCCCGCAGGAACGCTGTCTTGCTCTCGACAGGAGCAATGCTGGCCCTGAATGTAGCTGAACGGAGTTCAGAGGCGGCTGCCAGAAGGCCGCCGCCCCCTCCTCCGCAAGAGAAGAAGGACCCCAATCTGAGTGGAGTGCAGGCAAAAGTACTAGCTAGCAAAAAGAGGAAGGAAGCCCTGAAAGAAGCTGTCGCCAAGCTGAGAGAGAAAGGGAAGCCTGTTGTTAAACAGCCACCACCTGAGGCTAAGGCTGAGGCTGAATAG

Protein sequence

MAHSLSSVSATARARATLSCSRFSSSRCSCSCSCLRPPSRSDACTEAPQDNLLVSRRNAVLLSTGAMLALNVAERSSEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEAVAKLREKGKPVVKQPPPEAKAEAE

Homology

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BLAST of Moc09g41730 vs. NCBI nr
Match: XP_022151991.1 (uncharacterized protein LOC111019817 [Momordica charantia])

HSP 1 Score: 251.9 bits (642), Expect = 3.2e-63
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MAHSLSSVSATARARATLSCSRFSSSRCSCSCSCLRPPSRSDACTEAPQDNLLVSRRNAV 60
           MAHSLSSVSATARARATLSCSRFSSSRCSCSCSCLRPPSRSDACTEAPQDNLLVSRRNAV
Sbjct: 1   MAHSLSSVSATARARATLSCSRFSSSRCSCSCSCLRPPSRSDACTEAPQDNLLVSRRNAV 60

Query: 61  LLSTGAMLALNVAERSSEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEAVAK 120
           LLSTGAMLALNVAERSSEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEAVAK
Sbjct: 61  LLSTGAMLALNVAERSSEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEAVAK 120

Query: 121 LREKGKPVVKQPPPEAKAEAE 142
           LREKGKPVVKQPPPEAKAEAE
Sbjct: 121 LREKGKPVVKQPPPEAKAEAE 141

[Close]

BLAST of Moc09g41730 vs. NCBI nr
Match: XP_004135338.1 (uncharacterized protein LOC101217329 [Cucumis sativus] >KGN51655.1 hypothetical protein Csa_009138 [Cucumis sativus])

HSP 1 Score: 144.4 bits (363), Expect = 7.3e-31
Identity = 94/136 (69.12%), Postives = 105/136 (77.21%), Query Frame = 0


Query: 1   MAHSLSSVSATARARATLSCS-RFSSSRCSCSCSCLRPPSRSDACTEAPQDNLLVSRRNA 60
           MAHSLSS+SATA   ATLS S RFS+++CS       P + S+AC E    N L+SRRN 
Sbjct: 1   MAHSLSSISATANVTATLSRSIRFSNTQCSYQ-RLPNPQACSNACNETQHTN-LISRRNT 60

Query: 61  VLLSTGAMLALNVAERSSEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEAVA 120
            L+ TG ML +NV +R +EAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEA A
Sbjct: 61  ALILTGVMLGVNVVDRRAEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEATA 120

Query: 121 KLREKGKPVVKQPPPE 136
           KLR KGKP V QPPPE
Sbjct: 121 KLRAKGKP-VDQPPPE 133

[Close]

BLAST of Moc09g41730 vs. NCBI nr
Match: XP_008446014.1 (PREDICTED: uncharacterized protein LOC103488868 [Cucumis melo] >KAA0034177.1 uncharacterized protein E6C27_scaffold65G001700 [Cucumis melo var. makuwa])

HSP 1 Score: 141.4 bits (355), Expect = 6.2e-30
Identity = 92/136 (67.65%), Postives = 107/136 (78.68%), Query Frame = 0


Query: 1   MAHSLSSVSATARARATLSCS-RFSSSRCSCSCSCLRPPSRSDACTEAPQDNLLVSRRNA 60
           MAHSLSS+SATA   AT+S S RFS+++CS       P +RS+A  ++   N L+SRRN 
Sbjct: 1   MAHSLSSISATANVTATISRSIRFSNTQCSYH-RLPNPQARSNARNQSEPSN-LISRRNT 60

Query: 61  VLLSTGAMLALNVAERSSEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEAVA 120
            L+ TG ML +NV +RS+EAAARRPPPPPP+EKKDPNLSGVQAKVLASKKRKEALKEA A
Sbjct: 61  ALILTGVMLGVNVVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATA 120

Query: 121 KLREKGKPVVKQPPPE 136
           KLR KGKP V QPPPE
Sbjct: 121 KLRAKGKP-VDQPPPE 133

[Close]

BLAST of Moc09g41730 vs. NCBI nr
Match: XP_022956419.1 (uncharacterized protein LOC111458160 [Cucurbita moschata] >KAG6601612.1 hypothetical protein SDJN03_06845, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 141.4 bits (355), Expect = 6.2e-30
Identity = 94/139 (67.63%), Postives = 110/139 (79.14%), Query Frame = 0


Query: 1   MAHSLSSVSATARARATLSCSRFSSSRCSCSCSCLRPP---SRSDACTEAPQDNLLVSRR 60
           MAHSLSS+SATA A A    +RFS+ RCS   SCLR P   +RS AC +  + + L+SRR
Sbjct: 1   MAHSLSSISATANATA----ARFSNPRCS---SCLRLPNLQARSQACNQTARSH-LISRR 60

Query: 61  NAVLLSTGAMLAL-NVAERSSEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKE 120
           NA L+ TGA+L L NV  +S+EAAARRPPPPPPQEKKDPNLSGVQAKVLAS+KRKEA+KE
Sbjct: 61  NAALILTGAILGLNNVVVQSAEAAARRPPPPPPQEKKDPNLSGVQAKVLASRKRKEAMKE 120

Query: 121 AVAKLREKGKPVVKQPPPE 136
           A+AKLRE+GK  V QPPPE
Sbjct: 121 AMAKLRERGK-AVDQPPPE 130

[Close]

BLAST of Moc09g41730 vs. NCBI nr
Match: XP_038877882.1 (uncharacterized protein LOC120070100 [Benincasa hispida])

HSP 1 Score: 141.0 bits (354), Expect = 8.0e-30
Identity = 94/136 (69.12%), Postives = 105/136 (77.21%), Query Frame = 0


Query: 1   MAHSLSSVSATARARATLSCS-RFSSSRCSCSCSCLRPPSRSDACTEAPQDNLLVSRRNA 60
           MAHSLSS+SATA   A LS S R S  +CS +       +RS+AC   P  + L+SRRNA
Sbjct: 1   MAHSLSSISATANVTAALSRSTRISGMQCS-NQRLPNLQTRSNACNRTPCSH-LISRRNA 60

Query: 61  VLLSTGAMLALNVAERSSEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEAVA 120
            L+ TGA+L LNV +RS+EAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEA A
Sbjct: 61  FLILTGAILGLNVVDRSAEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEATA 120

Query: 121 KLREKGKPVVKQPPPE 136
           KLR KGKP V QPPPE
Sbjct: 121 KLRAKGKP-VDQPPPE 133

[Close]

BLAST of Moc09g41730 vs. ExPASy TrEMBL
Match: A0A6J1DGA2 (uncharacterized protein LOC111019817 OS=Momordica charantia OX=3673 GN=LOC111019817 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.6e-63
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MAHSLSSVSATARARATLSCSRFSSSRCSCSCSCLRPPSRSDACTEAPQDNLLVSRRNAV 60
           MAHSLSSVSATARARATLSCSRFSSSRCSCSCSCLRPPSRSDACTEAPQDNLLVSRRNAV
Sbjct: 1   MAHSLSSVSATARARATLSCSRFSSSRCSCSCSCLRPPSRSDACTEAPQDNLLVSRRNAV 60

Query: 61  LLSTGAMLALNVAERSSEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEAVAK 120
           LLSTGAMLALNVAERSSEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEAVAK
Sbjct: 61  LLSTGAMLALNVAERSSEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEAVAK 120

Query: 121 LREKGKPVVKQPPPEAKAEAE 142
           LREKGKPVVKQPPPEAKAEAE
Sbjct: 121 LREKGKPVVKQPPPEAKAEAE 141

[Close]

BLAST of Moc09g41730 vs. ExPASy TrEMBL
Match: A0A0A0KPU5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G588750 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 3.5e-31
Identity = 94/136 (69.12%), Postives = 105/136 (77.21%), Query Frame = 0


Query: 1   MAHSLSSVSATARARATLSCS-RFSSSRCSCSCSCLRPPSRSDACTEAPQDNLLVSRRNA 60
           MAHSLSS+SATA   ATLS S RFS+++CS       P + S+AC E    N L+SRRN 
Sbjct: 1   MAHSLSSISATANVTATLSRSIRFSNTQCSYQ-RLPNPQACSNACNETQHTN-LISRRNT 60

Query: 61  VLLSTGAMLALNVAERSSEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEAVA 120
            L+ TG ML +NV +R +EAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEA A
Sbjct: 61  ALILTGVMLGVNVVDRRAEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEATA 120

Query: 121 KLREKGKPVVKQPPPE 136
           KLR KGKP V QPPPE
Sbjct: 121 KLRAKGKP-VDQPPPE 133

[Close]

BLAST of Moc09g41730 vs. ExPASy TrEMBL
Match: A0A5A7SY24 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001700 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 3.0e-30
Identity = 92/136 (67.65%), Postives = 107/136 (78.68%), Query Frame = 0


Query: 1   MAHSLSSVSATARARATLSCS-RFSSSRCSCSCSCLRPPSRSDACTEAPQDNLLVSRRNA 60
           MAHSLSS+SATA   AT+S S RFS+++CS       P +RS+A  ++   N L+SRRN 
Sbjct: 1   MAHSLSSISATANVTATISRSIRFSNTQCSYH-RLPNPQARSNARNQSEPSN-LISRRNT 60

Query: 61  VLLSTGAMLALNVAERSSEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEAVA 120
            L+ TG ML +NV +RS+EAAARRPPPPPP+EKKDPNLSGVQAKVLASKKRKEALKEA A
Sbjct: 61  ALILTGVMLGVNVVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATA 120

Query: 121 KLREKGKPVVKQPPPE 136
           KLR KGKP V QPPPE
Sbjct: 121 KLRAKGKP-VDQPPPE 133

[Close]

BLAST of Moc09g41730 vs. ExPASy TrEMBL
Match: A0A6J1GYZ4 (uncharacterized protein LOC111458160 OS=Cucurbita moschata OX=3662 GN=LOC111458160 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 3.0e-30
Identity = 94/139 (67.63%), Postives = 110/139 (79.14%), Query Frame = 0


Query: 1   MAHSLSSVSATARARATLSCSRFSSSRCSCSCSCLRPP---SRSDACTEAPQDNLLVSRR 60
           MAHSLSS+SATA A A    +RFS+ RCS   SCLR P   +RS AC +  + + L+SRR
Sbjct: 1   MAHSLSSISATANATA----ARFSNPRCS---SCLRLPNLQARSQACNQTARSH-LISRR 60

Query: 61  NAVLLSTGAMLAL-NVAERSSEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKE 120
           NA L+ TGA+L L NV  +S+EAAARRPPPPPPQEKKDPNLSGVQAKVLAS+KRKEA+KE
Sbjct: 61  NAALILTGAILGLNNVVVQSAEAAARRPPPPPPQEKKDPNLSGVQAKVLASRKRKEAMKE 120

Query: 121 AVAKLREKGKPVVKQPPPE 136
           A+AKLRE+GK  V QPPPE
Sbjct: 121 AMAKLRERGK-AVDQPPPE 130

[Close]

BLAST of Moc09g41730 vs. ExPASy TrEMBL
Match: A0A1S3BE14 (uncharacterized protein LOC103488868 OS=Cucumis melo OX=3656 GN=LOC103488868 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 3.0e-30
Identity = 92/136 (67.65%), Postives = 107/136 (78.68%), Query Frame = 0


Query: 1   MAHSLSSVSATARARATLSCS-RFSSSRCSCSCSCLRPPSRSDACTEAPQDNLLVSRRNA 60
           MAHSLSS+SATA   AT+S S RFS+++CS       P +RS+A  ++   N L+SRRN 
Sbjct: 1   MAHSLSSISATANVTATISRSIRFSNTQCSYH-RLPNPQARSNARNQSEPSN-LISRRNT 60

Query: 61  VLLSTGAMLALNVAERSSEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEAVA 120
            L+ TG ML +NV +RS+EAAARRPPPPPP+EKKDPNLSGVQAKVLASKKRKEALKEA A
Sbjct: 61  ALILTGVMLGVNVVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATA 120

Query: 121 KLREKGKPVVKQPPPE 136
           KLR KGKP V QPPPE
Sbjct: 121 KLRAKGKP-VDQPPPE 133

[Close]

BLAST of Moc09g41730 vs. TAIR 10
Match: AT1G21500.1 (unknown protein; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 2.2e-17
Identity = 50/88 (56.82%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 54  VSRRNAVLLSTGAMLALN--VAERSSEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRK 113
           ++RR  ++   GA+ + N   A+  + AAARRPPPPPP+EKKDP ++GVQAKVLASKKRK
Sbjct: 39  INRRTILVGLGGALWSWNALAAKEEAMAAARRPPPPPPKEKKDPTVTGVQAKVLASKKRK 98

Query: 114 EALKEAVAKLREKGKPVVKQPPPEAKAE 140
           E +K ++AKLREKGKPVV+  P  + +E
Sbjct: 99  EEMKASIAKLREKGKPVVEAKPSSSSSE 126

The following BLAST results are available for this feature:

BLAST of Moc09g41730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151991.1	3.2e-63	100.00	uncharacterized protein LOC111019817 [Momordica charantia]	[more]
XP_004135338.1	7.3e-31	69.12	uncharacterized protein LOC101217329 [Cucumis sativus] >KGN51655.1 hypothetical ...	[more]
XP_008446014.1	6.2e-30	67.65	PREDICTED: uncharacterized protein LOC103488868 [Cucumis melo] >KAA0034177.1 unc...	[more]
XP_022956419.1	6.2e-30	67.63	uncharacterized protein LOC111458160 [Cucurbita moschata] >KAG6601612.1 hypothet...	[more]
XP_038877882.1	8.0e-30	69.12	uncharacterized protein LOC120070100 [Benincasa hispida]	[more]

BLAST of Moc09g41730 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc09g41730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DGA2	1.6e-63	100.00	uncharacterized protein LOC111019817 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A0A0KPU5	3.5e-31	69.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G588750 PE=4 SV=1	[more]
A0A5A7SY24	3.0e-30	67.65	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1GYZ4	3.0e-30	67.63	uncharacterized protein LOC111458160 OS=Cucurbita moschata OX=3662 GN=LOC1114581...	[more]
A0A1S3BE14	3.0e-30	67.65	uncharacterized protein LOC103488868 OS=Cucumis melo OX=3656 GN=LOC103488868 PE=...	[more]

BLAST of Moc09g41730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21500.1	2.2e-17	56.82	unknown protein; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 104..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..141
None	No IPR available	PANTHER	PTHR37182:SF2	F24J8.11 PROTEIN	coord: 1..134
None	No IPR available	PANTHER	PTHR37182	F24J8.11 PROTEIN	coord: 1..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g41730.1	Moc09g41730.1	mRNA