Moc09g41510 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g41510
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Nup54 domain-containing protein
Location	chr9: 31593422 .. 31597036 (-)
RNA-Seq Expression	Moc09g41510
Synteny	Moc09g41510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCGGAGCTCAACCGTCCTCCTCCGCCTTCGGCACTCCACAATCGACTCCTGCCTTCGGCACTCCGTCGTCCACTCCTGCCTTCGGAACTCCGTCGGCGTCTCCCGCATTTGGAAACCTTTCCTCAACTCCTGCCTTCGGGACTCCGTCTACGTCGACTTTTGGCACCGGCTTCGGATCGTCTCTCTTCTCCACTCCATTCTCTTCTCAGCCTTCACAACAGCCACAGCAGCAGCAGCAATCACCGCTGTTTCAGCAACCGCCCGCCACAGGATTCGGTTTCCAGACTCCGTTTGCCGCGCCTCAGTCCACTCCCTTTCCAAATGCTCAATTGACCACTCAGATGGCTCCGGTGGCGCCGCTTCCTTTCTCCATGGCAGATCGAGATATTCAAGTACGTTCTGAATGTAATCGGCAAGACCTAGCAATATCTCCTTTCTTCTTCTGTATCAGCGCCTATTTATTTTTCTTTCATTGTTTGCATCAGGCAATTGTTGAGGCTTACAAGGACGAGGCAGGAAACCCTAAGTATGCTTTCAAGGTTTGCTTCCCTGTTATAAACTGGCATTTATGTTTTTATTTGTACTTATACTTGAGTGTCGATTATCGTAACGAAGGATATGATTAATTTTCTTATAAGTTCATGGAAGTAATATGCTCATCATTTTACAGTAGATTCTAAATTGACGCTTGTGATGATTTTGCAGCATTTATTGTTCAGTGTAACCGATCCTCAATTTAGGGCTAAGCCTGCTGGTGTATCAGACGTGAGTTCAATATTTCGTGTTTTTTTAAGTCTGAAAATTTTAAATCTATTTCTATGTATTATTTTTCGTTGGATTCTGCACTAAGTTCAGAGAATAGTTTGCATTGCCAGATAATGTGGGCTGAGGCTATGACAAAGCTGGAAGGCATGGAAAGTGCTGATAGAGAGCGATTGTGGCCACAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGGTAATTTTTCAATTTACTGCAAAATGAGGTGTGAAATTCTTTGATTACTTTTTAAGATTCTTGTCTCAGTGCTTGAAGGTTGTGTGTGTCTTCCATGTATATGCTTAGTTCATCATGTTCTATGAGTTTTTAGCATAGCCTTTTGTTATAGATTCAATTTTCTTTTTCATCATTTCCTTCACTGGTGGTGAATTCACAGGTGTGTTGTTCTGCTGCATTAACTAATATTAATCAATTTTTTTTCCTGCATCATGGATCCAATTTGATACTTGGGTTCTGGATATCAGTGGGTGATCTAAAGTTTCATTTGAGAGATGGCACCAGTGACTGTATAATTATATGTTTAGTTCACCTGTTTCACAATATTAAATTAATTTTTATTTTTAACTCAATGATTATATTAGTTATGTTTTATATTAATTATATTTTCTTTTCAATATTGTACTTAATTTTAACTGCTTTAATATTCGTCTATTTCCACAATTTTGTTTGAAATAAATATTTAGTTTAATGATTTTTGACATAAATAATAGTTTTATTTAATTAAATAAAAACAATTGTTTGAGGACTAACTGAATTCTTAAAATTAGGAAAGATTTCAATTTTTGGTGAAATTATGGTTTCAATTATTACGGTGAAGAAAAACTAAATTTAAATCTACAAATCAAGGATTAACATTATTAGAGAATAAAATTCTTATATTGACCAAGATTGTTATCATTTAAAAAAAAAACCAGCAAAATTGTTTTAGATGTTGTATATATTGGACAATTTCAAATTTTCTCGCGGCATATGTGCCGCCTTTGTGCCTGCAGTATATTCGCCCTTGCCGGATGTCATTATGCTGACAAATGCTAATGCATGGCAAGTAGTTATTTCTTTTCCCTTCCATATAATAATAATGGTCCATTTGCTATTGACTTTCAAAACTATGTAAGAAAGGTAAACGGATTTTTAATTATTCAACTCACATAAAATGTCTTGGAGTCATATTTGATAGGATGCCAATTATGTTTTATTCGATGCATCAATGATTGGTGAAACAAATGTGATAGCTTCCTGATAAGTTTTCTGTTTCCATTTATGATTACAAAATTTGGTCTTGCGTAAATATGATTATCTTTCTGTTTGAGTATGTACCGATAGTACGTGTTCGTAGTTGTAATGTGCTGAGCCTGCCTCTGCATGTACTTCCGGTATTCTTTTTTCAAGTAAATGCTCTTGAAAGTTGTGAAATTAAGAATCTGTTTCGTTTCAGTTACTGTTAGTAAAATTATTTTTTAACATCTAAAAAATCCTGACATTAGCTCATTTCTTGAAACTATTTTTTGTGCATACTTTTTTGCCCATTTGAAGCATATATTTTTCTTTGTAATGAACTTGTGTTTGCTGACTTAAATACCCTGGTTTCTTGGACTGACGCTCTAGTGGGGTTAATGTAGATTCAAGATGAAGTCATTCTTTCTGATGCTGAGAGACTGCGGATGACCCAAAGCAATGTCAAAATGGTAGGTTTCTGCTCCATTATTGATAAAATTTAAGTTTTCTTTTCCTGATTGATGTTTGATGCAGCTTCAGAGGCATTTTCTAGCTGACACTCTACCTTGGGTCCAAAGATTGCGGCAGAAGGAGCAAGGTCTACAAAGGCGTCTCTTGAGAGTATGTATTATTTCAGCTAATAAATGAGCAAATATGCAAAAAAGTGCTATGAGTTTGATCTTCTCATCACCCCCCACCTCCCCACCCCCCAAGAAAAAAAAGGTTAATTATGCTTCTTATGCCAAACTGCATCTAAATTAAAGTTTACCTTCTTTTGTTTCCAAATTTAGGTCATGAGAATTGTGGAGGCACTAGAAAGTAAGGGTTGCCGAGTGCCTGTAATGAAAGGGGAGGCTGAATTGGCTGAGAAGTTAGCTTTAATAACGAGGCAGGTGGGTATCCCTCACCCATTTTACTTTTATTGCCAAATAAGACACTAAAGTTCTCTTGGGAAGTTAGTAGGTCATTTCCGTATAGTTTGATCAAATTCAAATTTATCCTTGTTATCAATATAATATGTAAACAATTCCAAAATATAATATGTTCTATAGTTATTTTACTTGTAATGAGTAATTCTAATTTCAAAAATATTTCAAATGTTTAAAGGCCATATTCCTCTTTATCAAGTCAGTGGGGTAAAATATGTTACTTATCCCAAAAGGTTGCATAGAAATAATGTACTTGGACACGTTTCAGTTGAAAGGATCCGGCGCAGAGCTTTCTAGGAGGGTGCAAAATTTGCTCACATTTACTCGTGGTCAAGCAAATGGCTCCAATTCTGGTAATTCCATCTATCTTCAAGGATCAGCAAAAATACACGAGCAGAGTCTTGCCGATATGCAGGAGGTGCGTATAATTTAAGTGTTTGGAGTTTTGCTGGAAAAAAAGTTAACAGGGTGCAATTTTTGATAAATACGTCATGTTATTGTCCAATTTATTATTCAACTTTATTTGCATGTCGTGTGTCAGGTTTTGCAGCAGCAGACCGAGGCCATTGCTAGACTTGGTATTGTTTTAAAGCGAGATGTTAGAGATATGGAAATCATAATGGCTGAAGACAAAGAGATGACAGATGATGCTAGTTAA

mRNA sequence

ATGTTCGGAGCTCAACCGTCCTCCTCCGCCTTCGGCACTCCACAATCGACTCCTGCCTTCGGCACTCCGTCGTCCACTCCTGCCTTCGGAACTCCGTCGGCGTCTCCCGCATTTGGAAACCTTTCCTCAACTCCTGCCTTCGGGACTCCGTCTACGTCGACTTTTGGCACCGGCTTCGGATCGTCTCTCTTCTCCACTCCATTCTCTTCTCAGCCTTCACAACAGCCACAGCAGCAGCAGCAATCACCGCTGTTTCAGCAACCGCCCGCCACAGGATTCGGTTTCCAGACTCCGTTTGCCGCGCCTCAGTCCACTCCCTTTCCAAATGCTCAATTGACCACTCAGATGGCTCCGGTGGCGCCGCTTCCTTTCTCCATGGCAGATCGAGATATTCAAGCAATTGTTGAGGCTTACAAGGACGAGGCAGGAAACCCTAAGTATGCTTTCAAGCATTTATTGTTCAGTGTAACCGATCCTCAATTTAGGGCTAAGCCTGCTGGTGTATCAGACATAATGTGGGCTGAGGCTATGACAAAGCTGGAAGGCATGGAAAGTGCTGATAGAGAGCGATTGTGGCCACAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGATTCAAGATGAAGTCATTCTTTCTGATGCTGAGAGACTGCGGATGACCCAAAGCAATGTCAAAATGCTTCAGAGGCATTTTCTAGCTGACACTCTACCTTGGGTCCAAAGATTGCGGCAGAAGGAGCAAGGTCTACAAAGGCGTCTCTTGAGAGTCATGAGAATTGTGGAGGCACTAGAAAGTAAGGGTTGCCGAGTGCCTGTAATGAAAGGGGAGGCTGAATTGGCTGAGAAGTTAGCTTTAATAACGAGGCAGTTGAAAGGATCCGGCGCAGAGCTTTCTAGGAGGGTGCAAAATTTGCTCACATTTACTCGTGGTCAAGCAAATGGCTCCAATTCTGGTAATTCCATCTATCTTCAAGGATCAGCAAAAATACACGAGCAGAGTCTTGCCGATATGCAGGAGGTTTTGCAGCAGCAGACCGAGGCCATTGCTAGACTTGGTATTGTTTTAAAGCGAGATGTTAGAGATATGGAAATCATAATGGCTGAAGACAAAGAGATGACAGATGATGCTAGTTAA

Coding sequence (CDS)

ATGTTCGGAGCTCAACCGTCCTCCTCCGCCTTCGGCACTCCACAATCGACTCCTGCCTTCGGCACTCCGTCGTCCACTCCTGCCTTCGGAACTCCGTCGGCGTCTCCCGCATTTGGAAACCTTTCCTCAACTCCTGCCTTCGGGACTCCGTCTACGTCGACTTTTGGCACCGGCTTCGGATCGTCTCTCTTCTCCACTCCATTCTCTTCTCAGCCTTCACAACAGCCACAGCAGCAGCAGCAATCACCGCTGTTTCAGCAACCGCCCGCCACAGGATTCGGTTTCCAGACTCCGTTTGCCGCGCCTCAGTCCACTCCCTTTCCAAATGCTCAATTGACCACTCAGATGGCTCCGGTGGCGCCGCTTCCTTTCTCCATGGCAGATCGAGATATTCAAGCAATTGTTGAGGCTTACAAGGACGAGGCAGGAAACCCTAAGTATGCTTTCAAGCATTTATTGTTCAGTGTAACCGATCCTCAATTTAGGGCTAAGCCTGCTGGTGTATCAGACATAATGTGGGCTGAGGCTATGACAAAGCTGGAAGGCATGGAAAGTGCTGATAGAGAGCGATTGTGGCCACAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGATTCAAGATGAAGTCATTCTTTCTGATGCTGAGAGACTGCGGATGACCCAAAGCAATGTCAAAATGCTTCAGAGGCATTTTCTAGCTGACACTCTACCTTGGGTCCAAAGATTGCGGCAGAAGGAGCAAGGTCTACAAAGGCGTCTCTTGAGAGTCATGAGAATTGTGGAGGCACTAGAAAGTAAGGGTTGCCGAGTGCCTGTAATGAAAGGGGAGGCTGAATTGGCTGAGAAGTTAGCTTTAATAACGAGGCAGTTGAAAGGATCCGGCGCAGAGCTTTCTAGGAGGGTGCAAAATTTGCTCACATTTACTCGTGGTCAAGCAAATGGCTCCAATTCTGGTAATTCCATCTATCTTCAAGGATCAGCAAAAATACACGAGCAGAGTCTTGCCGATATGCAGGAGGTTTTGCAGCAGCAGACCGAGGCCATTGCTAGACTTGGTATTGTTTTAAAGCGAGATGTTAGAGATATGGAAATCATAATGGCTGAAGACAAAGAGATGACAGATGATGCTAGTTAA

Protein sequence

MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGTGFGSSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKRDVRDMEIIMAEDKEMTDDAS

Homology

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BLAST of Moc09g41510 vs. NCBI nr
Match: XP_022151739.1 (nuclear pore complex protein NUP54 [Momordica charantia])

HSP 1 Score: 714.1 bits (1842), Expect = 6.2e-202
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 1   MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGTGFG 60
           MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGTGFG
Sbjct: 1   MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGTGFG 60

Query: 61  SSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQLTTQMAPVA 120
           SSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQLTTQMAPVA
Sbjct: 61  SSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQLTTQMAPVA 120

Query: 121 PLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKL 180
           PLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKL
Sbjct: 121 PLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKL 180

Query: 181 EGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLP 240
           EGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLP
Sbjct: 181 EGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLP 240

Query: 241 WVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL 300
           WVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL
Sbjct: 241 WVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL 300

Query: 301 SRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKR 360
           SRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKR
Sbjct: 301 SRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKR 360

Query: 361 DVRDMEIIMAEDKEMTDDAS 381
           DVRDMEIIMAEDKEMTDDAS
Sbjct: 361 DVRDMEIIMAEDKEMTDDAS 380

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BLAST of Moc09g41510 vs. NCBI nr
Match: XP_038893426.1 (nuclear pore complex protein NUP54 [Benincasa hispida])

HSP 1 Score: 668.3 bits (1723), Expect = 3.9e-188
Identity = 359/389 (92.29%), Postives = 370/389 (95.12%), Query Frame = 0


Query: 1   MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPS 60
           MFGAQPSSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 61  TSTFGTGFGSSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQ 120
           TS+F TGFGSSLFSTPFSSQPSQ  QQ QQSPLF QP ATGFGFQTPFAAPQSTPFPNAQ
Sbjct: 61  TSSFATGFGSSLFSTPFSSQPSQPQQQLQQSPLFPQPAATGFGFQTPFAAPQSTPFPNAQ 120

Query: 121 LTTQMAPVAPLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDI 180
           LTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+R KPAGVSDI
Sbjct: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRVKPAGVSDI 180

Query: 181 MWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQ 240
           MWAEAM KLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSD++RLRMTQSNVKMLQ
Sbjct: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSDRLRMTQSNVKMLQ 240

Query: 241 RHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 300
           RHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 300

Query: 301 QLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360
           QLKGSGAELSRRVQNLLT TRGQANGS++GNSIYLQGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSRRVQNLLTITRGQANGSSAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 361 ARLGIVLKRDVRDMEIIMAEDKEMTDDAS 381
           ARLG VLKRDVRDMEIIMAED+EMTDDAS
Sbjct: 361 ARLGNVLKRDVRDMEIIMAEDREMTDDAS 389

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BLAST of Moc09g41510 vs. NCBI nr
Match: XP_004135312.1 (nuclear pore complex protein NUP54 [Cucumis sativus] >KGN51680.1 hypothetical protein Csa_009114 [Cucumis sativus])

HSP 1 Score: 658.7 bits (1698), Expect = 3.1e-185
Identity = 355/389 (91.26%), Postives = 363/389 (93.32%), Query Frame = 0


Query: 1   MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPS 60
           MFGAQPSSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 61  TSTFGTGFGSSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQ 120
           TS+F TGFGSSLFSTPFSSQPSQQ QQ QQSP+F Q  ATGFGFQTPF APQSTPFPNAQ
Sbjct: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSATGFGFQTPFTAPQSTPFPNAQ 120

Query: 121 LTTQMAPVAPLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDI 180
           LTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+R KP GVSDI
Sbjct: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDI 180

Query: 181 MWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQ 240
           MWAEAM KLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQ
Sbjct: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240

Query: 241 RHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 300
           RHFLADTLPWVQRL+QKEQGLQR LLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 300

Query: 301 QLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360
           QLKGSGAELSRRVQNLLT TRGQANGS  GNSIY QGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 361 ARLGIVLKRDVRDMEIIMAEDKEMTDDAS 381
           ARLG VLKRDVRDMEIIMAEDKEM DDAS
Sbjct: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 389

[Close]

BLAST of Moc09g41510 vs. NCBI nr
Match: XP_008446043.1 (PREDICTED: nuclear pore complex protein NUP54 [Cucumis melo] >KAA0034202.1 nuclear pore complex protein NUP54 [Cucumis melo var. makuwa] >TYK15718.1 nuclear pore complex protein NUP54 [Cucumis melo var. makuwa])

HSP 1 Score: 657.5 bits (1695), Expect = 6.9e-185
Identity = 356/389 (91.52%), Postives = 365/389 (93.83%), Query Frame = 0


Query: 1   MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPS 60
           MFGAQ SSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 61  TSTFGTGFGSSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQ 120
           TS+F TGFGSSLFSTPFSSQPSQQ QQ QQS LF Q  ATGFGFQTPFAAPQSTPFPNAQ
Sbjct: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ 120

Query: 121 LTTQMAPVAPLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDI 180
           LTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+RAKP GVSDI
Sbjct: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI 180

Query: 181 MWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQ 240
           MWAEAM KLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQ
Sbjct: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240

Query: 241 RHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 300
           RHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR 300

Query: 301 QLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360
           QLKGSGAELS+RVQNLLT TRGQANGS  GNSIYLQGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 361 ARLGIVLKRDVRDMEIIMAEDKEMTDDAS 381
           ARLG VLKRDVRDMEIIMAEDKEM DDAS
Sbjct: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 389

[Close]

BLAST of Moc09g41510 vs. NCBI nr
Match: KAG6573649.1 (Nuclear pore complex protein NUP54, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 645.6 bits (1664), Expect = 2.7e-181
Identity = 342/379 (90.24%), Postives = 358/379 (94.46%), Query Frame = 0


Query: 2   FGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGTGFGS 61
           FG   S+ AFGTPQSTPAFGTP+STPAFGTPSASPAFGN SSTPAFGTPS+S+F TGFGS
Sbjct: 28  FGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNFSSTPAFGTPSSSSFATGFGS 87

Query: 62  SLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQLTTQMAPVAP 121
           SLFSTPFSSQPSQ  QQQQQSPLFQ P ATGFGFQTPFAAPQS+PFPNAQLTTQMAPVAP
Sbjct: 88  SLFSTPFSSQPSQPQQQQQQSPLFQLPAATGFGFQTPFAAPQSSPFPNAQLTTQMAPVAP 147

Query: 122 LPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKLE 181
           LPFSMADRDIQAIVEAYKD+AGNPKYAFK LLFSVTDPQ+RAKPAGVSDIMWAEAM KLE
Sbjct: 148 LPFSMADRDIQAIVEAYKDDAGNPKYAFKRLLFSVTDPQYRAKPAGVSDIMWAEAMAKLE 207

Query: 182 GMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPW 241
           GMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVK LQRHFLADTLPW
Sbjct: 208 GMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKTLQRHFLADTLPW 267

Query: 242 VQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS 301
           +QRL+QKEQGLQRRLLR+MR+VEALESKGCRVP+M GEAELAE+LALITRQL+GSGAELS
Sbjct: 268 IQRLKQKEQGLQRRLLRMMRVVEALESKGCRVPIMTGEAELAERLALITRQLRGSGAELS 327

Query: 302 RRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKRD 361
           RRV+NLLT T GQANGS +GNSIYLQGS KIHEQSLADMQEVLQQQTEAIARLG VLKRD
Sbjct: 328 RRVKNLLTITCGQANGSGAGNSIYLQGSTKIHEQSLADMQEVLQQQTEAIARLGTVLKRD 387

Query: 362 VRDMEIIMAEDKEMTDDAS 381
           VRDMEIIMAEDKEM DD S
Sbjct: 388 VRDMEIIMAEDKEMIDDLS 406

[Close]

BLAST of Moc09g41510 vs. ExPASy Swiss-Prot
Match: Q8GYF7 (Nuclear pore complex protein NUP54 OS=Arabidopsis thaliana OX=3702 GN=NUP54 PE=1 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 7.7e-139
Identity = 269/378 (71.16%), Postives = 316/378 (83.60%), Query Frame = 0


Query: 11  FGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGT-GFGSSLFSTPFS 70
           FGTP S+P+FGTPSSTPAFGT  +SPAFG  S+TPAFGTPS  +F + GFGSSLFS+PFS
Sbjct: 2   FGTPSSSPSFGTPSSTPAFGT--SSPAFGTPSATPAFGTPSNPSFSSGGFGSSLFSSPFS 61

Query: 71  SQPSQQPQQQQQ----SPLFQQPPATGFGFQTPF----AAPQSTPFPNAQLTTQMAPVAP 130
           SQ  QQ QQQQQ    S LFQQ P++ FGFQ+PF       Q TPFPNAQLTTQMAPVAP
Sbjct: 62  SQQPQQQQQQQQQQQPSSLFQQQPSSNFGFQSPFNNTAQQQQQTPFPNAQLTTQMAPVAP 121

Query: 131 LPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKLE 190
           +P+S+ADRD+QAI+EAYK++  NPKYAF+HLLFSVT+PQ+R KPA VSDIMWAEAM+KLE
Sbjct: 122 IPYSLADRDVQAIIEAYKEDPTNPKYAFQHLLFSVTEPQYRVKPAAVSDIMWAEAMSKLE 181

Query: 191 GMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPW 250
           GM+S +RERLWPQLVQGFKDLSQRLK+QDEV++SD +R++ TQSNVKMLQRH  A T P 
Sbjct: 182 GMDSTERERLWPQLVQGFKDLSQRLKLQDEVLVSDRDRIKTTQSNVKMLQRHLQASTFPS 241

Query: 251 VQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS 310
           ++RLRQKEQ LQRR+LRVMRI+E LE KG R+P+ KGEAEL+EKL  ITRQ+KG GAELS
Sbjct: 242 IERLRQKEQSLQRRMLRVMRIIEGLEGKGFRLPLTKGEAELSEKLTAITRQVKGPGAELS 301

Query: 311 RRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKRD 370
           RRVQ+L T +R QAN   +G+S+YL GS KI EQSL DMQEVLQQ+TEAI RLG VLKRD
Sbjct: 302 RRVQSLQTISRAQANSIAAGSSLYLPGSTKIDEQSLIDMQEVLQQETEAIGRLGNVLKRD 361

Query: 371 VRDMEIIMAEDKEMTDDA 380
           +RDMEI++AED EM  D+
Sbjct: 362 MRDMEIMVAEDTEMALDS 377

[Close]

BLAST of Moc09g41510 vs. ExPASy Swiss-Prot
Match: Q9VDV3 (Nuclear pore complex protein Nup58 OS=Drosophila melanogaster OX=7227 GN=Nup58 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.7e-08
Identity = 53/134 (39.55%), Postives = 72/134 (53.73%), Query Frame = 0


Query: 2   FGAQPSSS-AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTP-STSTFGTGF 61
           FGA  +++ AFGT  +TPAFG P++T AFG P+A+PAFG  ++TPAFG P +T  FG   
Sbjct: 82  FGATSTAAPAFGTAAATPAFGIPAATSAFGAPAATPAFGAAAATPAFGAPAATPAFGAPA 141

Query: 62  GSSLFSTPFSSQPSQQPQQQQQSPLFQQPPATG-----FGFQTP-FAAPQSTPFPNAQLT 121
            +S F  P ++     P   Q S      PA G     F F TP  +AP + P      T
Sbjct: 142 ATSAFGAPAATTAFGAPASTQASAFGAPAPAVGTVAPTFSFATPATSAPTTAPPAFGFGT 201

Query: 122 TQMAPVAPLPFSMA 128
           T     A +P S++
Sbjct: 202 TATTAAAAMPASLS 215

[Close]

BLAST of Moc09g41510 vs. ExPASy Swiss-Prot
Match: Q8BTS4 (Nuclear pore complex protein Nup54 OS=Mus musculus OX=10090 GN=Nup54 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.1e-07
Identity = 52/204 (25.49%), Postives = 102/204 (50.00%), Query Frame = 0


Query: 165 PAGVSDIMWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQ 224
           PAGV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +  
Sbjct: 304 PAGVDPIIWEQAK-----VDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIIS 363

Query: 225 SNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAE 284
            ++  LQ++    T+  + + ++K   L  R L+V+   E     G    +   E +L  
Sbjct: 364 EDISELQKN-QTTTMAKIAQYKRKLMELSHRTLQVLIKQEIQRKSG--YAIQADEEQLRV 423

Query: 285 KLALITRQLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVL 344
           +L  I  +L  +  +   R+  L++  R Q    N   ++  +    I    L ++++ L
Sbjct: 424 QLDTIQGEL-NAPTQFKGRLNELMSQIRMQ----NHFGAVKSEEKYYIDADLLREIKQHL 483

Query: 345 QQQTEAIARLGIVLKRDVRDMEII 369
           +QQ E ++ L  ++K D+ D++++
Sbjct: 484 KQQQEGLSHLISIIKDDLEDIKLV 494

[Close]

BLAST of Moc09g41510 vs. ExPASy Swiss-Prot
Match: P70582 (Nuclear pore complex protein Nup54 OS=Rattus norvegicus OX=10116 GN=Nup54 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.1e-07
Identity = 52/204 (25.49%), Postives = 102/204 (50.00%), Query Frame = 0


Query: 165 PAGVSDIMWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQ 224
           PAGV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +  
Sbjct: 304 PAGVDPIIWEQAK-----VDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIIS 363

Query: 225 SNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAE 284
            ++  LQ++    T+  + + ++K   L  R L+V+   E     G    +   E +L  
Sbjct: 364 EDISELQKN-QTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSG--YAIQAEEEQLRV 423

Query: 285 KLALITRQLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVL 344
           +L  I  +L  +  +   R+  L++  R Q    N   ++  +    I    L ++++ L
Sbjct: 424 QLDTIQGEL-NAPTQFKGRLNELMSQIRMQ----NHFGAVKSEEKYYIDADLLREIKQHL 483

Query: 345 QQQTEAIARLGIVLKRDVRDMEII 369
           +QQ E ++ L  ++K D+ D++++
Sbjct: 484 KQQQEGLSHLISIIKDDLEDIKLV 494

[Close]

BLAST of Moc09g41510 vs. ExPASy Swiss-Prot
Match: Q7Z3B4 (Nucleoporin p54 OS=Homo sapiens OX=9606 GN=NUP54 PE=1 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-06
Identity = 51/204 (25.00%), Postives = 102/204 (50.00%), Query Frame = 0


Query: 165 PAGVSDIMWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQ 224
           PAGV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +  
Sbjct: 301 PAGVDPIIWEQAK-----VDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIIS 360

Query: 225 SNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAE 284
            ++  LQ++    ++  + + ++K   L  R L+V+   E     G    +   E +L  
Sbjct: 361 EDISELQKN-QTTSVAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSG--YAIQADEEQLRV 420

Query: 285 KLALITRQLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVL 344
           +L  I  +L  +  +   R+  L++  R Q    N   ++  +    I    L ++++ L
Sbjct: 421 QLDTIQGEL-NAPTQFKGRLNELMSQIRMQ----NHFGAVRSEERYYIDADLLREIKQHL 480

Query: 345 QQQTEAIARLGIVLKRDVRDMEII 369
           +QQ E ++ L  ++K D+ D++++
Sbjct: 481 KQQQEGLSHLISIIKDDLEDIKLV 491

[Close]

BLAST of Moc09g41510 vs. ExPASy TrEMBL
Match: A0A6J1DDY9 (nuclear pore complex protein NUP54 OS=Momordica charantia OX=3673 GN=LOC111019650 PE=4 SV=1)

HSP 1 Score: 714.1 bits (1842), Expect = 3.0e-202
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 1   MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGTGFG 60
           MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGTGFG
Sbjct: 1   MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGTGFG 60

Query: 61  SSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQLTTQMAPVA 120
           SSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQLTTQMAPVA
Sbjct: 61  SSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQLTTQMAPVA 120

Query: 121 PLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKL 180
           PLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKL
Sbjct: 121 PLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKL 180

Query: 181 EGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLP 240
           EGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLP
Sbjct: 181 EGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLP 240

Query: 241 WVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL 300
           WVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL
Sbjct: 241 WVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL 300

Query: 301 SRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKR 360
           SRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKR
Sbjct: 301 SRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKR 360

Query: 361 DVRDMEIIMAEDKEMTDDAS 381
           DVRDMEIIMAEDKEMTDDAS
Sbjct: 361 DVRDMEIIMAEDKEMTDDAS 380

[Close]

BLAST of Moc09g41510 vs. ExPASy TrEMBL
Match: A0A0A0KPW8 (Nup54 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589970 PE=4 SV=1)

HSP 1 Score: 658.7 bits (1698), Expect = 1.5e-185
Identity = 355/389 (91.26%), Postives = 363/389 (93.32%), Query Frame = 0


Query: 1   MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPS 60
           MFGAQPSSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 61  TSTFGTGFGSSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQ 120
           TS+F TGFGSSLFSTPFSSQPSQQ QQ QQSP+F Q  ATGFGFQTPF APQSTPFPNAQ
Sbjct: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSATGFGFQTPFTAPQSTPFPNAQ 120

Query: 121 LTTQMAPVAPLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDI 180
           LTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+R KP GVSDI
Sbjct: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDI 180

Query: 181 MWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQ 240
           MWAEAM KLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQ
Sbjct: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240

Query: 241 RHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 300
           RHFLADTLPWVQRL+QKEQGLQR LLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 300

Query: 301 QLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360
           QLKGSGAELSRRVQNLLT TRGQANGS  GNSIY QGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 361 ARLGIVLKRDVRDMEIIMAEDKEMTDDAS 381
           ARLG VLKRDVRDMEIIMAEDKEM DDAS
Sbjct: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 389

[Close]

BLAST of Moc09g41510 vs. ExPASy TrEMBL
Match: A0A5A7SSX4 (Nuclear pore complex protein NUP54 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002170 PE=4 SV=1)

HSP 1 Score: 657.5 bits (1695), Expect = 3.3e-185
Identity = 356/389 (91.52%), Postives = 365/389 (93.83%), Query Frame = 0


Query: 1   MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPS 60
           MFGAQ SSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 61  TSTFGTGFGSSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQ 120
           TS+F TGFGSSLFSTPFSSQPSQQ QQ QQS LF Q  ATGFGFQTPFAAPQSTPFPNAQ
Sbjct: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ 120

Query: 121 LTTQMAPVAPLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDI 180
           LTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+RAKP GVSDI
Sbjct: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI 180

Query: 181 MWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQ 240
           MWAEAM KLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQ
Sbjct: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240

Query: 241 RHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 300
           RHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR 300

Query: 301 QLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360
           QLKGSGAELS+RVQNLLT TRGQANGS  GNSIYLQGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 361 ARLGIVLKRDVRDMEIIMAEDKEMTDDAS 381
           ARLG VLKRDVRDMEIIMAEDKEM DDAS
Sbjct: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 389

[Close]

BLAST of Moc09g41510 vs. ExPASy TrEMBL
Match: A0A1S3BE47 (nuclear pore complex protein NUP54 OS=Cucumis melo OX=3656 GN=LOC103488894 PE=4 SV=1)

HSP 1 Score: 657.5 bits (1695), Expect = 3.3e-185
Identity = 356/389 (91.52%), Postives = 365/389 (93.83%), Query Frame = 0


Query: 1   MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPS 60
           MFGAQ SSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 61  TSTFGTGFGSSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQ 120
           TS+F TGFGSSLFSTPFSSQPSQQ QQ QQS LF Q  ATGFGFQTPFAAPQSTPFPNAQ
Sbjct: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ 120

Query: 121 LTTQMAPVAPLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDI 180
           LTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+RAKP GVSDI
Sbjct: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI 180

Query: 181 MWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQ 240
           MWAEAM KLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQ
Sbjct: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240

Query: 241 RHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 300
           RHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR 300

Query: 301 QLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360
           QLKGSGAELS+RVQNLLT TRGQANGS  GNSIYLQGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 361 ARLGIVLKRDVRDMEIIMAEDKEMTDDAS 381
           ARLG VLKRDVRDMEIIMAEDKEM DDAS
Sbjct: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 389

[Close]

BLAST of Moc09g41510 vs. ExPASy TrEMBL
Match: A0A6J1G105 (nuclear pore complex protein NUP54 OS=Cucurbita moschata OX=3662 GN=LOC111449684 PE=4 SV=1)

HSP 1 Score: 641.3 bits (1653), Expect = 2.5e-180
Identity = 342/379 (90.24%), Postives = 357/379 (94.20%), Query Frame = 0


Query: 2   FGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGTGFGS 61
           FG   S+ AFGTPQSTPAFGTP STPAFGTPSASPAFGN SSTPAFGTPS+S+F TGFGS
Sbjct: 29  FGTPQSTPAFGTPQSTPAFGTPQSTPAFGTPSASPAFGNFSSTPAFGTPSSSSFATGFGS 88

Query: 62  SLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQLTTQMAPVAP 121
           SLFSTPFSSQPSQ  QQQQQSPLFQ P ATGFGFQTPFAAPQS+PFPNAQLTTQMAPVAP
Sbjct: 89  SLFSTPFSSQPSQ--QQQQQSPLFQLPAATGFGFQTPFAAPQSSPFPNAQLTTQMAPVAP 148

Query: 122 LPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKLE 181
           LPFSMADRDIQAIVEAYKD+AGNPKYAFK LLFSVTDPQ+RAKPAGVSDIMWAEAM KLE
Sbjct: 149 LPFSMADRDIQAIVEAYKDDAGNPKYAFKRLLFSVTDPQYRAKPAGVSDIMWAEAMAKLE 208

Query: 182 GMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPW 241
           GMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVK LQRHFLADTLPW
Sbjct: 209 GMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKTLQRHFLADTLPW 268

Query: 242 VQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS 301
           +QRL+QKEQGLQRRLLR+MR+VEALESKGCRVP+M GEAELAE+LALITRQL+GSGAELS
Sbjct: 269 IQRLKQKEQGLQRRLLRMMRVVEALESKGCRVPIMTGEAELAERLALITRQLRGSGAELS 328

Query: 302 RRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKRD 361
           RRV+NLLT T GQANGS +GNSIYLQGS KIHEQSLADMQEVLQQQTEAIARLG VLKRD
Sbjct: 329 RRVKNLLTITCGQANGSGAGNSIYLQGSTKIHEQSLADMQEVLQQQTEAIARLGTVLKRD 388

Query: 362 VRDMEIIMAEDKEMTDDAS 381
           VRDMEIIMAEDKEM DD S
Sbjct: 389 VRDMEIIMAEDKEMIDDLS 405

[Close]

BLAST of Moc09g41510 vs. TAIR 10
Match: AT1G24310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 2922 Blast hits to 2454 proteins in 263 species: Archae - 0; Bacteria - 57; Metazoa - 1043; Fungi - 654; Plants - 388; Viruses - 11; Other Eukaryotes - 769 (source: NCBI BLink). )

HSP 1 Score: 495.0 bits (1273), Expect = 5.5e-140
Identity = 269/378 (71.16%), Postives = 316/378 (83.60%), Query Frame = 0


Query: 11  FGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGT-GFGSSLFSTPFS 70
           FGTP S+P+FGTPSSTPAFGT  +SPAFG  S+TPAFGTPS  +F + GFGSSLFS+PFS
Sbjct: 2   FGTPSSSPSFGTPSSTPAFGT--SSPAFGTPSATPAFGTPSNPSFSSGGFGSSLFSSPFS 61

Query: 71  SQPSQQPQQQQQ----SPLFQQPPATGFGFQTPF----AAPQSTPFPNAQLTTQMAPVAP 130
           SQ  QQ QQQQQ    S LFQQ P++ FGFQ+PF       Q TPFPNAQLTTQMAPVAP
Sbjct: 62  SQQPQQQQQQQQQQQPSSLFQQQPSSNFGFQSPFNNTAQQQQQTPFPNAQLTTQMAPVAP 121

Query: 131 LPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKLE 190
           +P+S+ADRD+QAI+EAYK++  NPKYAF+HLLFSVT+PQ+R KPA VSDIMWAEAM+KLE
Sbjct: 122 IPYSLADRDVQAIIEAYKEDPTNPKYAFQHLLFSVTEPQYRVKPAAVSDIMWAEAMSKLE 181

Query: 191 GMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPW 250
           GM+S +RERLWPQLVQGFKDLSQRLK+QDEV++SD +R++ TQSNVKMLQRH  A T P 
Sbjct: 182 GMDSTERERLWPQLVQGFKDLSQRLKLQDEVLVSDRDRIKTTQSNVKMLQRHLQASTFPS 241

Query: 251 VQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS 310
           ++RLRQKEQ LQRR+LRVMRI+E LE KG R+P+ KGEAEL+EKL  ITRQ+KG GAELS
Sbjct: 242 IERLRQKEQSLQRRMLRVMRIIEGLEGKGFRLPLTKGEAELSEKLTAITRQVKGPGAELS 301

Query: 311 RRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKRD 370
           RRVQ+L T +R QAN   +G+S+YL GS KI EQSL DMQEVLQQ+TEAI RLG VLKRD
Sbjct: 302 RRVQSLQTISRAQANSIAAGSSLYLPGSTKIDEQSLIDMQEVLQQETEAIGRLGNVLKRD 361

Query: 371 VRDMEIIMAEDKEMTDDA 380
           +RDMEI++AED EM  D+
Sbjct: 362 MRDMEIMVAEDTEMALDS 377

[Close]

BLAST of Moc09g41510 vs. TAIR 10
Match: AT1G10390.1 (Nucleoporin autopeptidase )

HSP 1 Score: 48.9 bits (115), Expect = 1.0e-05
Identity = 55/117 (47.01%), Postives = 64/117 (54.70%), Query Frame = 0


Query: 2   FGAQPSSSAFGTPQSTPAFGTP------SSTPAFGTPSASPAFGNLSSTPAFG-TPSTST 61
           F AQ  SS FG+  ST  FG P      +STP FG  S+SPAFGN  STPAFG +P++S 
Sbjct: 47  FAAQSGSSIFGS-TSTGVFGAPQTSSPFASTPTFGA-SSSPAFGN--STPAFGASPASSP 106

Query: 62  FG--TGFGSSL--FSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPF 108
           FG  +GFG     FSTP S+      QQ Q  P F     T FG  TPF A  +  F
Sbjct: 107 FGGSSGFGQKPLGFSTPQSNPFGNSTQQSQ--PAFGN---TSFGSSTPFGATNTPAF 154

[Close]

BLAST of Moc09g41510 vs. TAIR 10
Match: AT1G10390.2 (Nucleoporin autopeptidase )

HSP 1 Score: 48.9 bits (115), Expect = 1.0e-05
Identity = 55/117 (47.01%), Postives = 64/117 (54.70%), Query Frame = 0


Query: 2   FGAQPSSSAFGTPQSTPAFGTP------SSTPAFGTPSASPAFGNLSSTPAFG-TPSTST 61
           F AQ  SS FG+  ST  FG P      +STP FG  S+SPAFGN  STPAFG +P++S 
Sbjct: 47  FAAQSGSSIFGS-TSTGVFGAPQTSSPFASTPTFGA-SSSPAFGN--STPAFGASPASSP 106

Query: 62  FG--TGFGSSL--FSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPF 108
           FG  +GFG     FSTP S+      QQ Q  P F     T FG  TPF A  +  F
Sbjct: 107 FGGSSGFGQKPLGFSTPQSNPFGNSTQQSQ--PAFGN---TSFGSSTPFGATNTPAF 154

The following BLAST results are available for this feature:

BLAST of Moc09g41510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151739.1	6.2e-202	100.00	nuclear pore complex protein NUP54 [Momordica charantia]	[more]
XP_038893426.1	3.9e-188	92.29	nuclear pore complex protein NUP54 [Benincasa hispida]	[more]
XP_004135312.1	3.1e-185	91.26	nuclear pore complex protein NUP54 [Cucumis sativus] >KGN51680.1 hypothetical pr...	[more]
XP_008446043.1	6.9e-185	91.52	PREDICTED: nuclear pore complex protein NUP54 [Cucumis melo] >KAA0034202.1 nucle...	[more]
KAG6573649.1	2.7e-181	90.24	Nuclear pore complex protein NUP54, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of Moc09g41510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYF7	7.7e-139	71.16	Nuclear pore complex protein NUP54 OS=Arabidopsis thaliana OX=3702 GN=NUP54 PE=1...	[more]
Q9VDV3	3.7e-08	39.55	Nuclear pore complex protein Nup58 OS=Drosophila melanogaster OX=7227 GN=Nup58 P...	[more]
Q8BTS4	4.1e-07	25.49	Nuclear pore complex protein Nup54 OS=Mus musculus OX=10090 GN=Nup54 PE=1 SV=1	[more]
P70582	4.1e-07	25.49	Nuclear pore complex protein Nup54 OS=Rattus norvegicus OX=10116 GN=Nup54 PE=1 S...	[more]
Q7Z3B4	1.6e-06	25.00	Nucleoporin p54 OS=Homo sapiens OX=9606 GN=NUP54 PE=1 SV=2	[more]

BLAST of Moc09g41510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DDY9	3.0e-202	100.00	nuclear pore complex protein NUP54 OS=Momordica charantia OX=3673 GN=LOC11101965...	[more]
A0A0A0KPW8	1.5e-185	91.26	Nup54 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589970 PE=4 ...	[more]
A0A5A7SSX4	3.3e-185	91.52	Nuclear pore complex protein NUP54 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BE47	3.3e-185	91.52	nuclear pore complex protein NUP54 OS=Cucumis melo OX=3656 GN=LOC103488894 PE=4 ...	[more]
A0A6J1G105	2.5e-180	90.24	nuclear pore complex protein NUP54 OS=Cucurbita moschata OX=3662 GN=LOC111449684...	[more]

BLAST of Moc09g41510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24310.1	5.5e-140	71.16	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G10390.1	1.0e-05	47.01	Nucleoporin autopeptidase	[more]
AT1G10390.2	1.0e-05	47.01	Nucleoporin autopeptidase	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 330..350
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..109
None	No IPR available	PANTHER	PTHR13000:SF0	NUCLEOPORIN P54	coord: 2..374
IPR025712	Nucleoporin Nup54, alpha-helical domain	PFAM	PF13874	Nup54	coord: 164..308 e-value: 3.6E-29 score: 101.6
IPR024864	Nucleoporin Nup54/Nup57/Nup44	PANTHER	PTHR13000	NUCLEOPORIN P54	coord: 2..374

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g41510.1	Moc09g41510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006607	NLS-bearing protein import into nucleus
biological_process	GO:0006999	nuclear pore organization
biological_process	GO:0036228	protein localization to nuclear inner membrane
cellular_component	GO:0044613	nuclear pore central transport channel
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0017056	structural constituent of nuclear pore