Moc09g41340 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g41340
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DNA polymerase alpha subunit B
Location	chr9: 31473288 .. 31478492 (+)
RNA-Seq Expression	Moc09g41340
Synteny	Moc09g41340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAGAGATCGGAGCAGAGTTCAAGAGGAGTGGTTTCACGTTCGATGAAGAGGAAGAGATTCTCAAGAAATGTAAGCTCAGCTTGTCTTTTTTGTTTGTTTTATGTCAACGGTTGGATACTAATGAGGCGTGGCGTGGCGATTCTTCCATCTTCTGCATTAGGTCTCACGTTCTGTGTTAATTACAATCTAAAGCCTTCGGATATAGTTTCTAGCTGGGAAGTTTACTATCTCAACAGGTGACTGCTTCTTCTGAACTATTTTCATATCTCCGATGGTCCTACAATTTAACATCTACTTGTCTAATTATCACTTAGAACTTTTCTGAGGCCTTTGTTTTTTTCCCCCAAGGGCAGCAGTAGAAAGCAACTTGATTTTGTGATATTATTTAGCTCCGAAGCTCGAATTCTGGGTTTTGTCTTTATTTTGTGAATGTTTTTCCATTTCTGAAGAGTTCGAGGATAATTGTTTCTCGGTTACAAGCTAATTGAATGTCTTGGACAGGCAATTAGATGGGTCAGTGGTACAGATTTCACAGATGGATGGATTTTTACAACATTTACAAAATGAGCAAAAACAAGCAGTCATTAAAGGGGAACCGGATCTTCATATTTATTCGAGCAAAGATGTGGACATGTATGGATTATTTTCAATATTTTCTTATTTTTCTGCTTTACGTAATAAGCAAGCACAAATTCCACACAACGTAGAATGATATTGATCTTTTGCTTTTCACCATCTATAGCTCACTATCCTATAATTGTGGTGTCAATATACGCACATGGTTTCTTTAGCAATTTTATGAAGTATGACGTACTAGTATGGCGATATGTGGCAATGCTTTAAAAGGTTTAAGGCGACCTCGAGACTCTTTCTCACGAGAGGCAAGACATAAGTCTTGAGGCATTCTGTTAGGTACCTTTAAGTTCGGTAAATTGCCTATTTGTACCAGGTTTGTAAATCTTTTCAGTACTTGATGAAATAACTCTTTCACAATTTAGTGAAAGATTTCAAGTGACACCATCAAACCCAAATAATAACTGTTCATTAATAATACATATAATATAACTAAGTTGGTACTTGTCTCTTGTTGAAATTTTAGTCGTGTTCCCTATTCGGCTGACAAATATCTCTAAGTATTACCGTAAGAAAGTAATAAAATACAATCTGTTCAGGATTTTGAATGACGAGGATGAAGATACAAACGAAGACATTCTTAAAACTCCAAATGGGAAATCTCAGAGCCTCCACAAGGAGCGATTTGACTCAACACCTTACACAAATGAAGGCTTGTTCTCTTCGGGGAAGCCTTCAAAGCATGTGACACCCTTCGGCCAAAGAAGAGAAAAATTTGTTGTGAGGTTCAGCATTAATGGCGTGCCTGATAACGAGACTCCTGAAAAGGAAGATAATTGCGAGAATGATGAGGATGCAATCATCAAGAAGGTTCAACCCCTACAAGGATGCTCCTTGACAGTCCTTGGATCAGGATCTGGACTTGAAGACAATTTCAGGTTCATGCATGACAAGGTTGAAGATAGGGTATTCACTATTTTTCATAGCATTGAATTTGATTCAATGGCACGATCACGACTTTAGTATATGTTCTAAAATAATTTAGTTTCTGATTTTATAGTCTAATGCTCTTGATAACCGAATCATGAAGTATGCCAAAGCTCTTTCTGCATCTGGGCAATATGAGGAAGCAGTGGACCCTACAGCGGCTTCGCAGGTAGTTTAATTTCATTATTTCACTCTTGCCCGATTTCTCTCTGAATTTAAGTGCATGTAAAATTTTTATTGAGAGCTGGGTAGCTTAGGTTTTAGGATTTATTCTACAAATCCAATCGAGGTCATCTAGCTGTTCGTGTTTGAATTTTTATCCTACAATTTTATGACTGCAAATCACAATACACTTTTTCTGAGTAAATGCTTAGCTTGCTTGGTGATACCACAAGTCTAAACGTGTGATCCCGTGTCAGAAAAGCATGTTTGCAGTAGGCATGATCTGTTGTGATGGTGAAGGACACTTAAACGATAAGTCCACCTTGTTACAATGCAGGTATTATTATATATTGTTTATTTTCCTGCTGTTTAGGAGCACTACTTTTCTATTATCGCTACTGTTTCCATTTTGGAAGTAAACAATACAAATACTATATTACTGGTAGTTATGTCATCTATGATCTACTAAACTTCGAGATTTGTTTTTTCTTATTTAGTTTTGAGCATTCAGGGGGGCAGCGAGTTCGTCTAGAATTACAAAACTTAAACCAGTTTTCAATCTTTCCTGGCCAGGTACGGACTGCAATGTAAATACTACTTTTAATAGCATCATCATCCGACATACATACCTACCTACAAAAATTGAATTCATGCAGGTAGTAGGTATTGAAGGGCATAATCCTAGTGGACACTGCTTGATTGCATCCAAACTTGTAGATTATTTTCCTTTGTCTGCCACTGTTGACCCCATTCTACCTCCAGCAAAGAAGAGAGCTTTGAACCATGATATCCAGCCAATGGATCAATCTTCTACACAGTCAAAATTATCAATGGTGTGTATTTTTGTAAATTCCTGATGTTTTTTCAGTCACCTTTTGTACCAGTCATCGTTGGATCATGTATCCTAACTCTTGTATCATATCTCTAGTTAGTAGCACATTAGAACAGGTTAATATTCCTGATCTATTAACATGTTTAATACGCACTTGAAATATTTTTAAACAGATTATTGCATCAGGCCCCTATACAACAACAGACAACTTATTGTTTGAGCCGTTGACAGAGTTATTAGCATATGCAAGAAGGAAGCTTCCTCAGCTACTAATATTGGTAAATGCTCATTCAGATCTTTTGTTTTTATGAAATGACCTGTCATTGTTGTCAGAAGTTCTTGTCATTGACGTTTTATGTTGTTTTAGCTTGGGCCATTTGTTGATTCTGAGCATTCTGATATCAAGAGAGGAATTGTAGAGATGAGCTTGGAGGAACTTTTTAACTTTGAAATTCTCAGAAGGGTAATAACTAACATGGTGTGCTTGACTTTGAAATAATTTATACGTTCCTTTTTTTTTCTTTTAATTTTGGCTTCATCTTGTTCAGGTGCAAGATTATGCAGAACACATGGGTCCTGATGCACGTGTACTGTTGATGCCATCTGTAAGGGATGCTAATCATGCCGAAGTTTTCCCTCAGGTATAAATTGTTGAGGCAGATCTATCAGCTTTTAAATGATTAAATTATTAAAGATCACCTTGTTCTGCAGCCTGCTTTTGACATTCCATCTGAACTTAAACTTCAGGTAATTTATTCGTAGACTTTGAGTTACTTCTAAATTTTATGGAGCTTCATTATCTTGAGTTATGCGTACTGTTGAAACTATGTTGCTTTGGTCCAGATTTCCTGTCTCCCAAACCCAGGCATTCTGGAAGCAAATCAGGTAAAACATGGATACGTCTTTGTGTTTCAAACAAGTTTTCTACGAATTTCTTATTTTGATCAAGATTTTCCTATGTCAGAAACTTAGAAGTTTGAAGTTCCCCATCACTGGTTTTCAATTAGTAGCTGGCTGTTTTTAATACGAAAAGAAAGAAAAATGGGAAAGAACAAGAGCTGGATGCTACATTGTAAATAAACACCAACAGATCCTTTCGAAAAAACCTTTCGAAAAAATAAACACCAACAGATAACAAAGCAAAACAAAAAAAGATTGATCCAACTAAGACCATCATCGCTGTTAGTCTGTCCATGATGTATGCGCCTGTGCTGGAGTAGAAATTTCAATAACAGACCATTAGTATTCTATTTCTTATAAATGAATAATTACATTTAGTTCCGGGTATCGTGCACCTGCACTTGCTGAGTTTATACCATGAGATAGTTTTTAAATTCTCATCAGAAAGGAAAAATGGAAAAAAAGTTAATAGTATTTTATTACCCTTTTGTAGAAAACAAATATAGACGTGGCGCCTCGTTTATCTCTTCTTGCCCTTCTCTTTTGGAATTCTGACAAAGTAAAAACAATCCAATGCATAATGGGAGAATGGAAGATCCTTTTGATTTCCTAACTGGATTCCCTTCTGCAGTTGATTTGGTTATTATCCTTTTGTTATCTTTTAATTGGAGGGAGGAGGGATCGGAAAGAAAGACTGATAGGAATGCCACGTGATATCTGCTTTTATTAGTTTTAAACAGAGTTCTAAAATATAGGCAAATATAATAAACCATGTTTCGGTTTGTGCAAAGTCTGTTGGCTAAGCATCTTTTAGCTGGCTATAGGGATATAATCAAATATTGACGTCTTAATTGTTTGAAACCTAGACTACCGAGCTTTCTTAGTTATTACATGCACGCAGTGGCGCAATAATAGTAAAAGTTCAAGAATACATAACCGACGTCTCATGTATATTTCCATCCATAATGGTTTCAGGTAAAGATAGCCTGCTGCACGACGGATATTCTCAGACACCTTAGTGGAGAAGAACTGTCGAGAAACCTAACCAAGGGATCAACCAATGACCGTCTGAGCACACTTGCAAGTCATATACTTCGCCAGCGAAGGCATGTTTTATGTTGGACACAAGAATGTTGGATATCCAACGTATTAATATAGTGTTCTCTTTATCTTACGGTTCTCTTGTTTCACTTGTTCGCAATGCAAACCAGCTTTTATCCTCTATACCCTCCAGCCGAAGGAGTTCCACTGGACTTTTCACTTGCCGCAGAAGCTCTTGACATCTCTGTAATACCCGATATTCTTATTCTTCCATCCGACATGAAACACTTCGTGAAGGTAAATGACTGTCCACTTTATTTTATTACTGTACATTTTACGTAGTATTGTCAGTTTTGTCTTCTTATCTTGCATTAATTTGTTCATTGTCAATACTAAGTCAATGATTAAAGTAAAAGGGTGGCAATTTTATTACACGTGTTATACATTCTAGATCAATGACTGGAGTTTAACCTTCTTATTTCTGCCCGTAAGCAGATAAAACGGACATGTTATTAAGAGCTTCAATGACTTCATTCTGTATCAGGTTATATCCCTTGGTGAAGGAGGATCAGAGGAAGAGCGAGCGAGCTGCGTATGTGTGAATCCCGGAAGACTGGCCAAGGGCGAAGGAGGGGGCACTTTTGTAGAGCTTAGTTACTTTGGTGCGCCGGACCAGATAAATGCTGCAGTTGTCAGCATATGA

mRNA sequence

ATGGAAGAAGAGATCGGAGCAGAGTTCAAGAGGAGTGGTTTCACGTTCGATGAAGAGGAAGAGATTCTCAAGAAATGTCTCACGTTCTGTGTTAATTACAATCTAAAGCCTTCGGATATAGTTTCTAGCTGGGAAGTTTACTATCTCAACAGGCAATTAGATGGGTCAGTGGTACAGATTTCACAGATGGATGGATTTTTACAACATTTACAAAATGAGCAAAAACAAGCAGTCATTAAAGGGGAACCGGATCTTCATATTTATTCGAGCAAAGATGTGGACATGATTTTGAATGACGAGGATGAAGATACAAACGAAGACATTCTTAAAACTCCAAATGGGAAATCTCAGAGCCTCCACAAGGAGCGATTTGACTCAACACCTTACACAAATGAAGGCTTGTTCTCTTCGGGGAAGCCTTCAAAGCATGTGACACCCTTCGGCCAAAGAAGAGAAAAATTTGTTGTGAGGTTCAGCATTAATGGCGTGCCTGATAACGAGACTCCTGAAAAGGAAGATAATTGCGAGAATGATGAGGATGCAATCATCAAGAAGGTTCAACCCCTACAAGGATGCTCCTTGACAGTCCTTGGATCAGGATCTGGACTTGAAGACAATTTCAGGTTCATGCATGACAAGGTTGAAGATAGGTCTAATGCTCTTGATAACCGAATCATGAAGTATGCCAAAGCTCTTTCTGCATCTGGGCAATATGAGGAAGCAGTGGACCCTACAGCGGCTTCGCAGAAAAGCATGTTTGCAGTAGGCATGATCTGTTGTGATGGTGAAGGACACTTAAACGATAAGTCCACCTTGTTACAATGCAGTTTTGAGCATTCAGGGGGGCAGCGAGTTCGTCTAGAATTACAAAACTTAAACCAGTTTTCAATCTTTCCTGGCCAGGTAGTAGGTATTGAAGGGCATAATCCTAGTGGACACTGCTTGATTGCATCCAAACTTGTAGATTATTTTCCTTTGTCTGCCACTGTTGACCCCATTCTACCTCCAGCAAAGAAGAGAGCTTTGAACCATGATATCCAGCCAATGGATCAATCTTCTACACAGTCAAAATTATCAATGATTATTGCATCAGGCCCCTATACAACAACAGACAACTTATTGTTTGAGCCGTTGACAGAGTTATTAGCATATGCAAGAAGGAAGCTTCCTCAGCTACTAATATTGCTTGGGCCATTTGTTGATTCTGAGCATTCTGATATCAAGAGAGGAATTGTAGAGATGAGCTTGGAGGAACTTTTTAACTTTGAAATTCTCAGAAGGGTGCAAGATTATGCAGAACACATGGGTCCTGATGCACGTGTACTGTTGATGCCATCTGTAAGGGATGCTAATCATGCCGAAGTTTTCCCTCAGCCTGCTTTTGACATTCCATCTGAACTTAAACTTCAGATTTCCTGTCTCCCAAACCCAGGCATTCTGGAAGCAAATCAGGTAAAGATAGCCTGCTGCACGACGGATATTCTCAGACACCTTAGTGGAGAAGAACTGTCGAGAAACCTAACCAAGGGATCAACCAATGACCGTCTGAGCACACTTGCAAGTCATATACTTCGCCAGCGAAGCTTTTATCCTCTATACCCTCCAGCCGAAGGAGTTCCACTGGACTTTTCACTTGCCGCAGAAGCTCTTGACATCTCTGTAATACCCGATATTCTTATTCTTCCATCCGACATGAAACACTTCGTGAAGGTTATATCCCTTGGTGAAGGAGGATCAGAGGAAGAGCGAGCGAGCTGCGTATGTGTGAATCCCGGAAGACTGGCCAAGGGCGAAGGAGGGGGCACTTTTGTAGAGCTTAGTTACTTTGGTGCGCCGGACCAGATAAATGCTGCAGTTGTCAGCATATGA

Coding sequence (CDS)

ATGGAAGAAGAGATCGGAGCAGAGTTCAAGAGGAGTGGTTTCACGTTCGATGAAGAGGAAGAGATTCTCAAGAAATGTCTCACGTTCTGTGTTAATTACAATCTAAAGCCTTCGGATATAGTTTCTAGCTGGGAAGTTTACTATCTCAACAGGCAATTAGATGGGTCAGTGGTACAGATTTCACAGATGGATGGATTTTTACAACATTTACAAAATGAGCAAAAACAAGCAGTCATTAAAGGGGAACCGGATCTTCATATTTATTCGAGCAAAGATGTGGACATGATTTTGAATGACGAGGATGAAGATACAAACGAAGACATTCTTAAAACTCCAAATGGGAAATCTCAGAGCCTCCACAAGGAGCGATTTGACTCAACACCTTACACAAATGAAGGCTTGTTCTCTTCGGGGAAGCCTTCAAAGCATGTGACACCCTTCGGCCAAAGAAGAGAAAAATTTGTTGTGAGGTTCAGCATTAATGGCGTGCCTGATAACGAGACTCCTGAAAAGGAAGATAATTGCGAGAATGATGAGGATGCAATCATCAAGAAGGTTCAACCCCTACAAGGATGCTCCTTGACAGTCCTTGGATCAGGATCTGGACTTGAAGACAATTTCAGGTTCATGCATGACAAGGTTGAAGATAGGTCTAATGCTCTTGATAACCGAATCATGAAGTATGCCAAAGCTCTTTCTGCATCTGGGCAATATGAGGAAGCAGTGGACCCTACAGCGGCTTCGCAGAAAAGCATGTTTGCAGTAGGCATGATCTGTTGTGATGGTGAAGGACACTTAAACGATAAGTCCACCTTGTTACAATGCAGTTTTGAGCATTCAGGGGGGCAGCGAGTTCGTCTAGAATTACAAAACTTAAACCAGTTTTCAATCTTTCCTGGCCAGGTAGTAGGTATTGAAGGGCATAATCCTAGTGGACACTGCTTGATTGCATCCAAACTTGTAGATTATTTTCCTTTGTCTGCCACTGTTGACCCCATTCTACCTCCAGCAAAGAAGAGAGCTTTGAACCATGATATCCAGCCAATGGATCAATCTTCTACACAGTCAAAATTATCAATGATTATTGCATCAGGCCCCTATACAACAACAGACAACTTATTGTTTGAGCCGTTGACAGAGTTATTAGCATATGCAAGAAGGAAGCTTCCTCAGCTACTAATATTGCTTGGGCCATTTGTTGATTCTGAGCATTCTGATATCAAGAGAGGAATTGTAGAGATGAGCTTGGAGGAACTTTTTAACTTTGAAATTCTCAGAAGGGTGCAAGATTATGCAGAACACATGGGTCCTGATGCACGTGTACTGTTGATGCCATCTGTAAGGGATGCTAATCATGCCGAAGTTTTCCCTCAGCCTGCTTTTGACATTCCATCTGAACTTAAACTTCAGATTTCCTGTCTCCCAAACCCAGGCATTCTGGAAGCAAATCAGGTAAAGATAGCCTGCTGCACGACGGATATTCTCAGACACCTTAGTGGAGAAGAACTGTCGAGAAACCTAACCAAGGGATCAACCAATGACCGTCTGAGCACACTTGCAAGTCATATACTTCGCCAGCGAAGCTTTTATCCTCTATACCCTCCAGCCGAAGGAGTTCCACTGGACTTTTCACTTGCCGCAGAAGCTCTTGACATCTCTGTAATACCCGATATTCTTATTCTTCCATCCGACATGAAACACTTCGTGAAGGTTATATCCCTTGGTGAAGGAGGATCAGAGGAAGAGCGAGCGAGCTGCGTATGTGTGAATCCCGGAAGACTGGCCAAGGGCGAAGGAGGGGGCACTTTTGTAGAGCTTAGTTACTTTGGTGCGCCGGACCAGATAAATGCTGCAGTTGTCAGCATATGA

Protein sequence

MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQISQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLHKERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDEDAIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSASGQYEEAVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPGQVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSMIIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELFNFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGILEANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVPLDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGGGTFVELSYFGAPDQINAAVVSI

Homology

[Close]

BLAST of Moc09g41340 vs. NCBI nr
Match: XP_022151967.1 (DNA polymerase alpha subunit B isoform X1 [Momordica charantia])

HSP 1 Score: 1243.4 bits (3216), Expect = 0.0e+00
Identity = 622/622 (100.00%), Postives = 622/622 (100.00%), Query Frame = 0


Query: 1   MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI 60
           MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI
Sbjct: 1   MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI 60

Query: 61  SQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH 120
           SQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH
Sbjct: 61  SQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH 120

Query: 121 KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED 180
           KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED
Sbjct: 121 KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED 180

Query: 181 AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSASGQYEE 240
           AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSASGQYEE
Sbjct: 181 AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSASGQYEE 240

Query: 241 AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG 300
           AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG
Sbjct: 241 AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG 300

Query: 301 QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSM 360
           QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSM
Sbjct: 301 QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSM 360

Query: 361 IIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELF 420
           IIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELF
Sbjct: 361 IIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELF 420

Query: 421 NFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGIL 480
           NFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGIL
Sbjct: 421 NFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGIL 480

Query: 481 EANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVP 540
           EANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVP
Sbjct: 481 EANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVP 540

Query: 541 LDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGG 600
           LDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGG
Sbjct: 541 LDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGG 600

Query: 601 GTFVELSYFGAPDQINAAVVSI 623
           GTFVELSYFGAPDQINAAVVSI
Sbjct: 601 GTFVELSYFGAPDQINAAVVSI 622

[Close]

BLAST of Moc09g41340 vs. NCBI nr
Match: XP_022151968.1 (DNA polymerase alpha subunit B isoform X2 [Momordica charantia])

HSP 1 Score: 1229.9 bits (3181), Expect = 0.0e+00
Identity = 618/622 (99.36%), Postives = 618/622 (99.36%), Query Frame = 0


Query: 1   MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI 60
           MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI
Sbjct: 1   MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI 60

Query: 61  SQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH 120
           SQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH
Sbjct: 61  SQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH 120

Query: 121 KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED 180
           KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED
Sbjct: 121 KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED 180

Query: 181 AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSASGQYEE 240
           AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDK    SNALDNRIMKYAKALSASGQYEE
Sbjct: 181 AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDK----SNALDNRIMKYAKALSASGQYEE 240

Query: 241 AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG 300
           AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG
Sbjct: 241 AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG 300

Query: 301 QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSM 360
           QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSM
Sbjct: 301 QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSM 360

Query: 361 IIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELF 420
           IIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELF
Sbjct: 361 IIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELF 420

Query: 421 NFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGIL 480
           NFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGIL
Sbjct: 421 NFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGIL 480

Query: 481 EANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVP 540
           EANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVP
Sbjct: 481 EANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVP 540

Query: 541 LDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGG 600
           LDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGG
Sbjct: 541 LDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGG 600

Query: 601 GTFVELSYFGAPDQINAAVVSI 623
           GTFVELSYFGAPDQINAAVVSI
Sbjct: 601 GTFVELSYFGAPDQINAAVVSI 618

[Close]

BLAST of Moc09g41340 vs. NCBI nr
Match: XP_023541613.1 (DNA polymerase alpha subunit B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1097.0 bits (2836), Expect = 0.0e+00
Identity = 542/622 (87.14%), Postives = 579/622 (93.09%), Query Frame = 0


Query: 1   MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI 60
           M++EIG EFKRSGFTFDEEEEILKKC+TFC+NY+LKPSDIVSSWEVYYLNRQLDGS+VQI
Sbjct: 1   MDDEIGEEFKRSGFTFDEEEEILKKCVTFCINYSLKPSDIVSSWEVYYLNRQLDGSIVQI 60

Query: 61  SQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH 120
           +QMDGFLQHLQNEQK+A+IK EPDLH+YSSKDVDMILN EDED  EDILKTPNGKSQ LH
Sbjct: 61  AQMDGFLQHLQNEQKEAIIKEEPDLHVYSSKDVDMILNAEDEDPMEDILKTPNGKSQGLH 120

Query: 121 KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED 180
           K+RFD TPYTNEGLFSSGKPSKHVTPFGQR EKF VRFSIN VPD ET E EDNCENDED
Sbjct: 121 KDRFDLTPYTNEGLFSSGKPSKHVTPFGQRTEKFAVRFSINNVPDKETAEMEDNCENDED 180

Query: 181 AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSASGQYEE 240
           AIIKKV PLQGCSLTV GSG GLE N RFM+D+VEDR NAL+NRI+K+AKAL ASG YEE
Sbjct: 181 AIIKKVLPLQGCSLTVHGSGFGLEPNCRFMYDRVEDRFNALENRIVKHAKALVASGLYEE 240

Query: 241 AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG 300
            VDPT ASQKSMFAVGMICCDG+GHLNDKST+LQ S EHSGGQRVRLELQNL QFSIFPG
Sbjct: 241 VVDPTVASQKSMFAVGMICCDGDGHLNDKSTMLQSSVEHSGGQRVRLELQNLGQFSIFPG 300

Query: 301 QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSM 360
           QVVGIEGHNPSGHCLIASKLVD FPLSAT+DPILPPAKK AL+HDIQP++Q STQS+LSM
Sbjct: 301 QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALDHDIQPINQPSTQSELSM 360

Query: 361 IIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELF 420
           IIASGPYTTTDN+LFEPLTELLAYA+RK PQLLILLGPFVDSEHSDIKRG VEMS EE+F
Sbjct: 361 IIASGPYTTTDNILFEPLTELLAYAKRKPPQLLILLGPFVDSEHSDIKRGTVEMSFEEIF 420

Query: 421 NFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGIL 480
           NFE+LRRVQDY EHMGPDARVLLMPS+RDANH  VFPQPAFDIPS+L+LQIS LPNPGIL
Sbjct: 421 NFEVLRRVQDYVEHMGPDARVLLMPSIRDANHDFVFPQPAFDIPSDLRLQISSLPNPGIL 480

Query: 481 EANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVP 540
           EANQ KIACCT DILRHLSGEELSRNLTKG+ NDRLSTLASHILRQRSFYPLYPPAEGVP
Sbjct: 481 EANQAKIACCTMDILRHLSGEELSRNLTKGTANDRLSTLASHILRQRSFYPLYPPAEGVP 540

Query: 541 LDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGG 600
           LDFSLA +ALDISVIPDILILPSDMKHFVKVISLGEG ++EERA+CVCVNPGRLAKGEGG
Sbjct: 541 LDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGRADEERANCVCVNPGRLAKGEGG 600

Query: 601 GTFVELSYFGAPDQINAAVVSI 623
           GTFVEL YFG P++INAAVVSI
Sbjct: 601 GTFVELKYFGTPEKINAAVVSI 622

[Close]

BLAST of Moc09g41340 vs. NCBI nr
Match: XP_022944938.1 (DNA polymerase alpha subunit B [Cucurbita moschata])

HSP 1 Score: 1095.5 bits (2832), Expect = 0.0e+00
Identity = 541/622 (86.98%), Postives = 578/622 (92.93%), Query Frame = 0


Query: 1   MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI 60
           M++EIG EFKRSGFTFDEEEEIL KC+TFCVNY+LKPSDIVSSWEVYYLNRQLDGS+VQI
Sbjct: 1   MDDEIGEEFKRSGFTFDEEEEILNKCVTFCVNYSLKPSDIVSSWEVYYLNRQLDGSIVQI 60

Query: 61  SQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH 120
           +QMDGFLQHLQNEQK+A+IK EPDLH+YSSKDVDMILNDEDED  EDILKTPNGKSQ LH
Sbjct: 61  AQMDGFLQHLQNEQKEAIIKEEPDLHVYSSKDVDMILNDEDEDPKEDILKTPNGKSQGLH 120

Query: 121 KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED 180
           K+RFD TPYTNEGLFSSGKPSKHVTPFGQR EKF VRFSIN VPD ET E EDNCENDED
Sbjct: 121 KDRFDLTPYTNEGLFSSGKPSKHVTPFGQRTEKFAVRFSINNVPDKETAEMEDNCENDED 180

Query: 181 AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSASGQYEE 240
           AIIKKV PLQGCSLTV GSG GLE N RFM+D+VEDR NAL+NRI+K+AKAL ASG YEE
Sbjct: 181 AIIKKVLPLQGCSLTVHGSGFGLEPNCRFMYDRVEDRFNALENRIVKHAKALVASGLYEE 240

Query: 241 AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG 300
            VDPT ASQKSMFAVGMICCDG+GHLNDKST+LQ S EHSGGQ VRLELQNL+QFSIFPG
Sbjct: 241 VVDPTVASQKSMFAVGMICCDGDGHLNDKSTMLQSSVEHSGGQWVRLELQNLSQFSIFPG 300

Query: 301 QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSM 360
           QVVGIEGHNPSGHCLIASKLVD FPLSAT+DPILPPAKK  L+HDIQP++Q ST+S+LSM
Sbjct: 301 QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKITLDHDIQPINQPSTESELSM 360

Query: 361 IIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELF 420
           IIASGPYTTTDN+LFEPLTELLAYA+RK PQLLILLGPFVDSEHSDIKRG VEMS EE+F
Sbjct: 361 IIASGPYTTTDNILFEPLTELLAYAKRKPPQLLILLGPFVDSEHSDIKRGTVEMSFEEIF 420

Query: 421 NFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGIL 480
           NFE+LRRVQDY EHMGPDARVLLMPS+RDANH  VFPQPAFDIPS+L+LQIS LPNPGIL
Sbjct: 421 NFEVLRRVQDYVEHMGPDARVLLMPSIRDANHDFVFPQPAFDIPSDLRLQISSLPNPGIL 480

Query: 481 EANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVP 540
           EANQ KIACCT DILRHLSGEELSRNLTKG+ NDRLSTLASHILRQRSFYPLYPPAEGVP
Sbjct: 481 EANQAKIACCTMDILRHLSGEELSRNLTKGTANDRLSTLASHILRQRSFYPLYPPAEGVP 540

Query: 541 LDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGG 600
           LDFSLA +ALDISVIPDILILPSDMKHFVKVISLGEG ++EERA+CVCVNPGRLAKGEGG
Sbjct: 541 LDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGRADEERANCVCVNPGRLAKGEGG 600

Query: 601 GTFVELSYFGAPDQINAAVVSI 623
           GTFVEL YFG PD+INAAVVSI
Sbjct: 601 GTFVELKYFGTPDKINAAVVSI 622

[Close]

BLAST of Moc09g41340 vs. NCBI nr
Match: KAG6573664.1 (DNA polymerase alpha subunit B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1094.0 bits (2828), Expect = 0.0e+00
Identity = 539/622 (86.66%), Postives = 578/622 (92.93%), Query Frame = 0


Query: 1   MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI 60
           M++EIG EFK+SGFTFDEEEEIL KC+TFC+NY+LKPSDIVSSWEVYYLNRQLDGS+VQI
Sbjct: 1   MDDEIGEEFKKSGFTFDEEEEILNKCVTFCINYSLKPSDIVSSWEVYYLNRQLDGSIVQI 60

Query: 61  SQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH 120
           +QMDGFLQHLQNEQK+A+IK EPDLH+YSSKDVDMILNDEDED  EDILKTPNGKSQ LH
Sbjct: 61  AQMDGFLQHLQNEQKEAIIKEEPDLHVYSSKDVDMILNDEDEDPKEDILKTPNGKSQGLH 120

Query: 121 KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED 180
           K+RFD TPYTNEGLFSSGKPSKHVTPFGQR EKF VRFSIN VPD ET E EDNCENDED
Sbjct: 121 KDRFDLTPYTNEGLFSSGKPSKHVTPFGQRTEKFAVRFSINNVPDKETAEMEDNCENDED 180

Query: 181 AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSASGQYEE 240
           AIIKKV PLQGCSLTV GSG GLE N RFM+D+VEDR NAL+NRI+K+AKAL ASG YEE
Sbjct: 181 AIIKKVLPLQGCSLTVHGSGFGLEPNCRFMYDRVEDRFNALENRIVKHAKALVASGLYEE 240

Query: 241 AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG 300
            VDPT A QKSMFAVGMICCDG+GHLNDKST+LQ S EHSGGQRVRLELQNL+QFSIFPG
Sbjct: 241 VVDPTVALQKSMFAVGMICCDGDGHLNDKSTMLQSSVEHSGGQRVRLELQNLSQFSIFPG 300

Query: 301 QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSM 360
           QVVGIEGHNPSGHCLIASKLVD FPLSAT+DPILPPAKK AL+HDIQP++Q ST+S+LSM
Sbjct: 301 QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALDHDIQPINQPSTESELSM 360

Query: 361 IIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELF 420
           IIASGPYTTTDN+LFEPLTELLAYA+RK PQLLILLGPFVDSEHSDIKRG V MS EE+F
Sbjct: 361 IIASGPYTTTDNILFEPLTELLAYAKRKPPQLLILLGPFVDSEHSDIKRGTVAMSFEEIF 420

Query: 421 NFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGIL 480
           NFE+LRRVQDY EHMGPDARVLLMPS+RDANH  VFPQPAFDIPS+L+LQIS LPNPGIL
Sbjct: 421 NFEVLRRVQDYVEHMGPDARVLLMPSIRDANHDFVFPQPAFDIPSDLRLQISSLPNPGIL 480

Query: 481 EANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVP 540
           EANQ KIACCT DILRHLSGEELSRNLTKG+ NDRLSTLASHILRQRSFYPLYPPAEGVP
Sbjct: 481 EANQAKIACCTMDILRHLSGEELSRNLTKGTANDRLSTLASHILRQRSFYPLYPPAEGVP 540

Query: 541 LDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGG 600
           LDFSLA +ALDISVIPDILILPSDMKHFVKVISLGEG ++EERA+CVCVNPGRLAKGEGG
Sbjct: 541 LDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGRADEERANCVCVNPGRLAKGEGG 600

Query: 601 GTFVELSYFGAPDQINAAVVSI 623
           GTFVEL YFG PD+INAAVVSI
Sbjct: 601 GTFVELKYFGTPDKINAAVVSI 622

[Close]

BLAST of Moc09g41340 vs. ExPASy Swiss-Prot
Match: Q14181 (DNA polymerase alpha subunit B OS=Homo sapiens OX=9606 GN=POLA2 PE=1 SV=2)

HSP 1 Score: 258.5 bits (659), Expect = 2.0e-67
Identity = 181/615 (29.43%), Postives = 299/615 (48.62%), Query Frame = 0


Query: 14  FTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI--SQMDGFLQHLQ 73
           F  D EE +++K +  CV Y      +V     +  +    G   +I  S    FL    
Sbjct: 15  FGLDCEEALIEKLVELCVQYGQNEEGMVGELIAFCTSTHKVGLTSEILNSFEHEFLSKRL 74

Query: 74  NEQKQAVIKGEPDLHIYSSKDV----DMILNDEDEDTNEDILKTPNGKSQSLHKERFDST 133
           ++ + +  K   D     ++D+    ++I  +E+E+   +   TP+  SQ    +R  ST
Sbjct: 75  SKARHSTCK---DSGHAGARDIVSIQELIEVEEEEEILLNSYTTPSKGSQ----KRAIST 134

Query: 134 PYT--NEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDEDAIIKK 193
           P T   +   S+  P + ++P              +    + TP ++ N  ++   ++  
Sbjct: 135 PETPLTKRSVSTRSPHQLLSP--------------SSFSPSATPSQKYNSRSNRGEVVTS 194

Query: 194 VQPLQG-----------CSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSA 253
               QG            SL VLG    L  +++ M  K+ D    L  +I +    L  
Sbjct: 195 FGLAQGVSWSGRGGAGNISLKVLGCPEALTGSYKSMFQKLPDIREVLTCKIEELGSELKE 254

Query: 254 SGQYEEAVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQ 313
             + E      A +Q+ +  +G I CD  G LN+KS +L+   EHS G ++ ++L  L +
Sbjct: 255 HYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLNNKSVILEGDREHSSGAQIPVDLSELKE 314

Query: 314 FSIFPGQVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSST 373
           +S+FPGQVV +EG N +G  L+A+KL +  PL                    QP ++ + 
Sbjct: 315 YSLFPGQVVIMEGINTTGRKLVATKLYEGVPLPF-----------------YQPTEEDAD 374

Query: 374 QSKLSMIIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEM 433
             +  +++A GPYTT+D++ ++PL +L+A      P + IL GPF+D++H  ++  ++  
Sbjct: 375 FEQSMVLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTS 434

Query: 434 SLEELFNFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAF---DIPSELKLQI 493
             E++F  + LR + +     G  + ++ +PS+RD +H  V+PQP F   D+  E K Q+
Sbjct: 435 PFEDIFK-QCLRTIIEGTRSSG--SHLVFVPSLRDVHHEPVYPQPPFSYSDLSREDKKQV 494

Query: 494 SCLPNPGILEANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYP 553
             +  P  L  N V     +TD+L HL  EE+S   +   T+DR S +  HIL QRS+YP
Sbjct: 495 QFVSEPCSLSINGVIFGLTSTDLLFHLGAEEIS---SSSGTSDRFSRILKHILTQRSYYP 554

Query: 554 LYPPAEGVPLDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNP 607
           LYPP E + +D+        + V PD+LI+PS++++FVK +             CVCVNP
Sbjct: 555 LYPPQEDMAIDYESFYVYAQLPVTPDVLIIPSELRYFVKDV-----------LGCVCVNP 574

[Close]

BLAST of Moc09g41340 vs. ExPASy Swiss-Prot
Match: P33611 (DNA polymerase alpha subunit B OS=Mus musculus OX=10090 GN=Pola2 PE=1 SV=2)

HSP 1 Score: 240.7 bits (613), Expect = 4.3e-62
Identity = 170/612 (27.78%), Postives = 288/612 (47.06%), Query Frame = 0


Query: 14  FTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQISQMDGFLQHLQNE 73
           F  D E+ +L+K    CV Y      +VS  E+         + + +  ++ F   + N+
Sbjct: 15  FGLDYEDSLLEKLAELCVLYRQTEDGMVS--ELIAFCTSAGKTCLTVDILNSFEYEVLNK 74

Query: 74  Q-KQAVIKGEPDLHIYSSKDV----DMILNDEDEDTNEDILKTPNGKSQSLHKERFDSTP 133
           +  +A      D     ++D+    ++I  +E+E+T      TP+ K           TP
Sbjct: 75  KLSKAWHSASKDSGHAGTRDIVSIQELIEAEEEEETLLSSYTTPS-KGPLKRVSSTPETP 134

Query: 134 YTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDEDAIIKKVQP 193
            T   + ++  P + ++P              +    + TP ++     +   ++     
Sbjct: 135 LTKRSV-AARSPRQLLSP--------------SSFSPSATPSQKYTSRTNRGEVVTTFGS 194

Query: 194 LQG-----------CSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSASGQ 253
            QG            SL V+G    L  +++ M  ++      L ++I +    L    +
Sbjct: 195 AQGLSWSGRGGSGSVSLKVVGDPEPLTGSYKAMFQQLMGVREVLTSKIEELGSELKEHHK 254

Query: 254 YEEAVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSI 313
            E        +Q+ +  +G I CD  G LN KS +L+   EHS G ++ ++L  L ++S+
Sbjct: 255 IEAFTPLLVPAQEPVILLGQIGCDSNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEYSL 314

Query: 314 FPGQVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSK 373
           FPGQVV +EG N +G  L A+KL +  PL                    QP ++     +
Sbjct: 315 FPGQVVIMEGFNTTGRRLTATKLYEGVPLPF-----------------YQPTEEEGASEQ 374

Query: 374 LSMIIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLE 433
             +++A GPYTT+D++ ++PL +L+A   R  P + IL GPF+D++H  ++   +    E
Sbjct: 375 TMVVVACGPYTTSDSITYDPLLDLIAIINRDQPDVCILFGPFLDAKHEQVENCKLTSPFE 434

Query: 434 ELFNFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAF---DIPSELKLQISCL 493
           ++F  + LR V +     G  + ++ +PS+RD +H  V+PQP F   ++  E K ++  +
Sbjct: 435 DVFK-QCLRTVIEGTRSSG--SHLVFVPSLRDVHHEPVYPQPPFTFSELSREDKKRVQFV 494

Query: 494 PNPGILEANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYP 553
             P  L  N V     +TD+L H+  EE+    +   T+DR S +  HIL QRS+YPLYP
Sbjct: 495 SEPCSLSINGVMFGLTSTDLLFHIGAEEI---FSSSGTSDRFSRVLKHILTQRSYYPLYP 554

Query: 554 PAEGVPLDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRL 607
           P E + +D+        + V PD+ I+PS++++FVK I             CVCVNPGRL
Sbjct: 555 PHEDMAIDYENFYTYAQLPVTPDVFIVPSELRYFVKDI-----------FGCVCVNPGRL 574

[Close]

BLAST of Moc09g41340 vs. ExPASy Swiss-Prot
Match: O89043 (DNA polymerase alpha subunit B OS=Rattus norvegicus OX=10116 GN=Pola2 PE=1 SV=2)

HSP 1 Score: 240.7 bits (613), Expect = 4.3e-62
Identity = 172/615 (27.97%), Postives = 288/615 (46.83%), Query Frame = 0


Query: 14  FTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQISQMDGFLQH--LQ 73
           F  D E+ +L+K    C  Y      +VS    +  +    G      ++    +H  L 
Sbjct: 15  FGLDCEDSLLEKLAELCTLYRQTEERMVSELIAFCTSA---GKSCLTGEILSSFEHEVLN 74

Query: 74  NEQKQAVIKGEPDLHIYSSKDV----DMILNDEDEDTNEDILKTPNGKSQSLHKERFDST 133
            +  +A      D     ++D+    ++I  +E+E+T      TP   S+  HK R  ST
Sbjct: 75  KKLSKACHSASKDNRHAGARDIVSIQELIEAEEEEETLLSAYTTP---SKGPHK-RVSST 134

Query: 134 PYT--NEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDEDAIIKK 193
           P T   +   S+  P + ++P              +    + TP ++ +   +   ++  
Sbjct: 135 PETPLTKRSISTRSPHQLLSP--------------SSFSPSATPSQKYSSRTNRGEVVTT 194

Query: 194 VQPLQG-----------CSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSA 253
               QG            SL V+G    L  +++ M  ++ D    L  +I +    L  
Sbjct: 195 FGSAQGVSWSGRGGSGSISLKVMGYPEPLTSSYKTMFQQLPDIREVLTCKIEELGSELKE 254

Query: 254 SGQYEEAVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQ 313
             + E        +Q+ +  +G I CD  G LN KS +L+   EHS G ++ +++  L  
Sbjct: 255 HYKIEAFTPLLVPAQEPVILLGQIGCDSNGRLNSKSVILEGDREHSSGAQIPVDVSELKD 314

Query: 314 FSIFPGQVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSST 373
           +S+FPGQVV +EG N +G  L A+KL +  PL                    QP ++   
Sbjct: 315 YSLFPGQVVIMEGFNTTGRRLTATKLYEGVPLPF-----------------YQPTEEEGD 374

Query: 374 QSKLSMIIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEM 433
             +  +++A GPYTT+D++ ++PL +L++      P + IL GPF+D++H  ++   +  
Sbjct: 375 FEQTMVLVACGPYTTSDSITYDPLLDLISTINHDRPDVCILFGPFLDAKHEQVENCKLTS 434

Query: 434 SLEELFNFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAF---DIPSELKLQI 493
             E++F  + LR V +     G  + ++ +PS+RD +H  V+PQP F   ++P E K ++
Sbjct: 435 PFEDIFK-QCLRTVIEGTRSSG--SHLVFVPSLRDVHHEPVYPQPPFTFSELPREDKKRV 494

Query: 494 SCLPNPGILEANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYP 553
             +  P  L  N V     +TD+L H+  EE+    +   T+DR S +  HIL QRS+YP
Sbjct: 495 QFVSEPCNLSINGVMFGLTSTDLLFHIGAEEI---CSSSGTSDRFSRILKHILTQRSYYP 554

Query: 554 LYPPAEGVPLDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNP 607
           LYPP E + +D+        + V PD+ I+PS++++FVK I             CVC+NP
Sbjct: 555 LYPPHEDMAIDYENFYTYAQLPVTPDVFIVPSELRYFVKDI-----------FGCVCMNP 574

[Close]

BLAST of Moc09g41340 vs. ExPASy Swiss-Prot
Match: Q58D13 (DNA polymerase alpha subunit B OS=Bos taurus OX=9913 GN=POLA2 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.9e-58
Identity = 159/580 (27.41%), Postives = 282/580 (48.62%), Query Frame = 0


Query: 14  FTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI--SQMDGFLQHLQ 73
           F  + EE +++K +  C+ Y      + S    +  + + D   ++   S    FL    
Sbjct: 15  FGLECEEAVIEKLVELCILYGQNEEGMASELIAFCTSTRKDCFTLETLNSFEHEFLSKRV 74

Query: 74  NEQKQAVIKGEPDLHIYSSKDV----DMILNDEDEDTNEDILKTPNGKSQSLHKERFDST 133
           ++ +    K +  L    ++D+    ++I  +E+E+T  +   TP+  SQ    +R  +T
Sbjct: 75  SKTRHGASK-DKGLRHAGARDIVSIQELIEVEEEEETLLNSYTTPSKGSQ----KRTITT 134

Query: 134 PYT--NEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDEDAIIKK 193
           P T   +   S+  P + ++P              +    + TP ++ +  ++   ++  
Sbjct: 135 PETPLTKRSVSARSPHQLLSP--------------SSFSPSATPPQKYSSRSNRGEVVTS 194

Query: 194 VQPLQG-----------CSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSA 253
               QG            SL VLG    L  ++++M  K+ D    L  +I +    L  
Sbjct: 195 FGSAQGVSWSGRGGASPLSLKVLGHPEPLTGSYKYMFQKLPDIREVLTCKIEELGSELKE 254

Query: 254 SGQYEEAVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQ 313
             + E        +Q+ +  +G I CD  G LN KS +L+   EHS G ++ ++L  L +
Sbjct: 255 HYKIEAFAPILVPAQEPVTLLGQIGCDSNGKLNHKSVILEGDLEHSSGAQIPVDLSELKE 314

Query: 314 FSIFPGQVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSST 373
           +S+FPGQVV +EG N +G  L+A++L +  PL                    QP ++   
Sbjct: 315 YSLFPGQVVVMEGINTTGRKLVATRLYEGVPLPFH-----------------QPDEEDGD 374

Query: 374 QSKLSMIIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEM 433
             +  +++A GPYTT+D++ F+PL +L+    R  P + IL GPF+D++H  ++  ++  
Sbjct: 375 SEQFMVLVACGPYTTSDSITFDPLLDLITIINRDRPDVCILFGPFLDAKHEQVESCLLTS 434

Query: 434 SLEELFNFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAF---DIPSELKLQI 493
           S E++F  + LR + +     G  + ++++PS+RD +H  V+PQP F   D+  E K ++
Sbjct: 435 SFEDVFK-QCLRTIIEGTRSSG--SHLIIVPSLRDVHHEPVYPQPPFSCSDLLREDKKRV 494

Query: 494 SCLPNPGILEANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYP 553
             +  P  L  N V     +TD+L H+  EE+S   +   T+DR S +  HIL QRS+YP
Sbjct: 495 RLVSEPCTLSINGVIFGLTSTDLLFHMGAEEIS---SSSGTSDRFSRILRHILTQRSYYP 552

Query: 554 LYPPAEGVPLDFSLAAEALDISVIPDILILPSDMKHFVKV 572
           LYPP E + +D+        + V PD+ I PS++++FVKV
Sbjct: 555 LYPPQEDMAIDYENFYLYAQLPVTPDVFIAPSELRYFVKV 552

[Close]

BLAST of Moc09g41340 vs. ExPASy Swiss-Prot
Match: O74946 (DNA polymerase alpha subunit B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pol12 PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.5e-48
Identity = 139/418 (33.25%), Postives = 211/418 (50.48%), Query Frame = 0


Query: 206 NFRFMHDKVEDRSNALDNRIMKYAKALSASGQY--EEAVDPTAASQKSMFAVGMICCDGE 265
           N+R M+ K+ D S  LD+RI  ++           E+  +P+  +Q+ +  VG I  +  
Sbjct: 157 NYRIMYQKLYDSSEVLDDRIELFSALTCRKYNISDEDLANPSELTQEPVVVVGRIVVEST 216

Query: 266 ---GHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPGQVVGIEGHNPSGHCLIASKL 325
              G LN  S LL+ S     G RVRL++ +L  +SIFPGQ+V ++G NPSG+  IA ++
Sbjct: 217 NLGGRLNQNSILLESSRRLGAGVRVRLKVDDLPSYSIFPGQIVSVKGSNPSGNMFIAKEI 276

Query: 326 VDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSMIIASGPYTTTDNLLFEPLTE 385
           +   PL        P + K+    +      ++    +S+ IASGP++  D+L F PL  
Sbjct: 277 LPIPPLP------FPSSSKQ----EHATFVANTNNQPISIYIASGPWSLRDDLSFSPLKS 336

Query: 386 LLAYARRKLPQLLILLGPFVDSEHSDIKRGIV----EMSLEELFNFEILRRVQDYAEHMG 445
           +++Y  +    L+IL GPF+D  H  I+ G +      SLEELF      RV      + 
Sbjct: 337 MISYVNKNPVDLVILCGPFLDINHILIRTGNITGTSATSLEELFK----ERVTPILSQL- 396

Query: 446 PDARVLLMPSVRD-ANHAEVFPQPAFD-IPSELKLQISCLPNPGILEANQVKIACCTTDI 505
                +L+P + D A+    +PQ AF+ +   L     C PNP +   N V     T DI
Sbjct: 397 -TCPCILIPHINDAASDHPAWPQDAFNRVALGLPSNFKCFPNPCMFSINDVVFGVSTNDI 456

Query: 506 LRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPA---EGVPLDFSLAAEALD 565
           L H S EEL R  + G+     + L SH+L QR FYPL+P     +  P +  +A   L 
Sbjct: 457 LLHTSREELFRLPSHGNL---FARLVSHVLHQRHFYPLFPGGSLEKCNPSNLDIAHLKLG 516

Query: 566 --ISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGGGTFVELS 608
             ++ +PDILILPSD+++FVK +            + V +NPG+  KG   GTF +L+
Sbjct: 517 EFLNTMPDILILPSDLRYFVKNVE-----------NVVSLNPGKATKGINLGTFAKLT 544

[Close]

BLAST of Moc09g41340 vs. ExPASy TrEMBL
Match: A0A6J1DEX3 (DNA polymerase alpha subunit B OS=Momordica charantia OX=3673 GN=LOC111019803 PE=3 SV=1)

HSP 1 Score: 1243.4 bits (3216), Expect = 0.0e+00
Identity = 622/622 (100.00%), Postives = 622/622 (100.00%), Query Frame = 0


Query: 1   MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI 60
           MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI
Sbjct: 1   MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI 60

Query: 61  SQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH 120
           SQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH
Sbjct: 61  SQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH 120

Query: 121 KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED 180
           KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED
Sbjct: 121 KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED 180

Query: 181 AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSASGQYEE 240
           AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSASGQYEE
Sbjct: 181 AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSASGQYEE 240

Query: 241 AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG 300
           AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG
Sbjct: 241 AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG 300

Query: 301 QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSM 360
           QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSM
Sbjct: 301 QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSM 360

Query: 361 IIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELF 420
           IIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELF
Sbjct: 361 IIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELF 420

Query: 421 NFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGIL 480
           NFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGIL
Sbjct: 421 NFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGIL 480

Query: 481 EANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVP 540
           EANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVP
Sbjct: 481 EANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVP 540

Query: 541 LDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGG 600
           LDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGG
Sbjct: 541 LDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGG 600

Query: 601 GTFVELSYFGAPDQINAAVVSI 623
           GTFVELSYFGAPDQINAAVVSI
Sbjct: 601 GTFVELSYFGAPDQINAAVVSI 622

[Close]

BLAST of Moc09g41340 vs. ExPASy TrEMBL
Match: A0A6J1DDL1 (DNA polymerase alpha subunit B OS=Momordica charantia OX=3673 GN=LOC111019803 PE=3 SV=1)

HSP 1 Score: 1229.9 bits (3181), Expect = 0.0e+00
Identity = 618/622 (99.36%), Postives = 618/622 (99.36%), Query Frame = 0


Query: 1   MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI 60
           MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI
Sbjct: 1   MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI 60

Query: 61  SQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH 120
           SQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH
Sbjct: 61  SQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH 120

Query: 121 KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED 180
           KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED
Sbjct: 121 KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED 180

Query: 181 AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSASGQYEE 240
           AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDK    SNALDNRIMKYAKALSASGQYEE
Sbjct: 181 AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDK----SNALDNRIMKYAKALSASGQYEE 240

Query: 241 AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG 300
           AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG
Sbjct: 241 AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG 300

Query: 301 QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSM 360
           QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSM
Sbjct: 301 QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSM 360

Query: 361 IIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELF 420
           IIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELF
Sbjct: 361 IIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELF 420

Query: 421 NFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGIL 480
           NFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGIL
Sbjct: 421 NFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGIL 480

Query: 481 EANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVP 540
           EANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVP
Sbjct: 481 EANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVP 540

Query: 541 LDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGG 600
           LDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGG
Sbjct: 541 LDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGG 600

Query: 601 GTFVELSYFGAPDQINAAVVSI 623
           GTFVELSYFGAPDQINAAVVSI
Sbjct: 601 GTFVELSYFGAPDQINAAVVSI 618

[Close]

BLAST of Moc09g41340 vs. ExPASy TrEMBL
Match: A0A6J1FZE8 (DNA polymerase alpha subunit B OS=Cucurbita moschata OX=3662 GN=LOC111449321 PE=3 SV=1)

HSP 1 Score: 1095.5 bits (2832), Expect = 0.0e+00
Identity = 541/622 (86.98%), Postives = 578/622 (92.93%), Query Frame = 0


Query: 1   MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI 60
           M++EIG EFKRSGFTFDEEEEIL KC+TFCVNY+LKPSDIVSSWEVYYLNRQLDGS+VQI
Sbjct: 1   MDDEIGEEFKRSGFTFDEEEEILNKCVTFCVNYSLKPSDIVSSWEVYYLNRQLDGSIVQI 60

Query: 61  SQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH 120
           +QMDGFLQHLQNEQK+A+IK EPDLH+YSSKDVDMILNDEDED  EDILKTPNGKSQ LH
Sbjct: 61  AQMDGFLQHLQNEQKEAIIKEEPDLHVYSSKDVDMILNDEDEDPKEDILKTPNGKSQGLH 120

Query: 121 KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED 180
           K+RFD TPYTNEGLFSSGKPSKHVTPFGQR EKF VRFSIN VPD ET E EDNCENDED
Sbjct: 121 KDRFDLTPYTNEGLFSSGKPSKHVTPFGQRTEKFAVRFSINNVPDKETAEMEDNCENDED 180

Query: 181 AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSASGQYEE 240
           AIIKKV PLQGCSLTV GSG GLE N RFM+D+VEDR NAL+NRI+K+AKAL ASG YEE
Sbjct: 181 AIIKKVLPLQGCSLTVHGSGFGLEPNCRFMYDRVEDRFNALENRIVKHAKALVASGLYEE 240

Query: 241 AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG 300
            VDPT ASQKSMFAVGMICCDG+GHLNDKST+LQ S EHSGGQ VRLELQNL+QFSIFPG
Sbjct: 241 VVDPTVASQKSMFAVGMICCDGDGHLNDKSTMLQSSVEHSGGQWVRLELQNLSQFSIFPG 300

Query: 301 QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSM 360
           QVVGIEGHNPSGHCLIASKLVD FPLSAT+DPILPPAKK  L+HDIQP++Q ST+S+LSM
Sbjct: 301 QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKITLDHDIQPINQPSTESELSM 360

Query: 361 IIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELF 420
           IIASGPYTTTDN+LFEPLTELLAYA+RK PQLLILLGPFVDSEHSDIKRG VEMS EE+F
Sbjct: 361 IIASGPYTTTDNILFEPLTELLAYAKRKPPQLLILLGPFVDSEHSDIKRGTVEMSFEEIF 420

Query: 421 NFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGIL 480
           NFE+LRRVQDY EHMGPDARVLLMPS+RDANH  VFPQPAFDIPS+L+LQIS LPNPGIL
Sbjct: 421 NFEVLRRVQDYVEHMGPDARVLLMPSIRDANHDFVFPQPAFDIPSDLRLQISSLPNPGIL 480

Query: 481 EANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVP 540
           EANQ KIACCT DILRHLSGEELSRNLTKG+ NDRLSTLASHILRQRSFYPLYPPAEGVP
Sbjct: 481 EANQAKIACCTMDILRHLSGEELSRNLTKGTANDRLSTLASHILRQRSFYPLYPPAEGVP 540

Query: 541 LDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGG 600
           LDFSLA +ALDISVIPDILILPSDMKHFVKVISLGEG ++EERA+CVCVNPGRLAKGEGG
Sbjct: 541 LDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGRADEERANCVCVNPGRLAKGEGG 600

Query: 601 GTFVELSYFGAPDQINAAVVSI 623
           GTFVEL YFG PD+INAAVVSI
Sbjct: 601 GTFVELKYFGTPDKINAAVVSI 622

[Close]

BLAST of Moc09g41340 vs. ExPASy TrEMBL
Match: A0A6J1HSI8 (DNA polymerase alpha subunit B OS=Cucurbita maxima OX=3661 GN=LOC111466380 PE=3 SV=1)

HSP 1 Score: 1090.5 bits (2819), Expect = 0.0e+00
Identity = 539/622 (86.66%), Postives = 578/622 (92.93%), Query Frame = 0


Query: 1   MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI 60
           M++EIG EFKRSGFTFDEEEEILKKC+TFC+NY+LKPSDIVSSWEVYYLNRQLDGS+VQI
Sbjct: 1   MDDEIGEEFKRSGFTFDEEEEILKKCVTFCINYSLKPSDIVSSWEVYYLNRQLDGSIVQI 60

Query: 61  SQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH 120
           +QMDGFLQHLQNEQK+A+IK EPDLH+YSSKDVDMILNDEDED  EDILKTPNGKSQ LH
Sbjct: 61  AQMDGFLQHLQNEQKEAIIKEEPDLHVYSSKDVDMILNDEDEDPKEDILKTPNGKSQGLH 120

Query: 121 KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED 180
           K+RFD TPYTNEGLFSSGKPSKHVTPFGQR EKF VRFSIN VPD ET E EDNCENDED
Sbjct: 121 KDRFDLTPYTNEGLFSSGKPSKHVTPFGQRTEKFAVRFSINNVPDKETAEVEDNCENDED 180

Query: 181 AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSASGQYEE 240
           AIIKKV PLQGCSLTV GSG GLE N RFM+D+VEDR NAL+NRI+K+AKAL ASG YEE
Sbjct: 181 AIIKKVLPLQGCSLTVHGSGFGLEPNCRFMYDRVEDRFNALENRIVKHAKALVASGLYEE 240

Query: 241 AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG 300
            VDPT ASQKS+FAVGMICCDG+GHLNDKST+LQ S EHSGGQRVRLELQNL+QFSIFPG
Sbjct: 241 VVDPTVASQKSLFAVGMICCDGDGHLNDKSTMLQSSVEHSGGQRVRLELQNLSQFSIFPG 300

Query: 301 QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSM 360
           QVVGIEGHNPSGHCLIASKLVD FPLSAT+DPILPPAKK AL+HDIQP+  SST S+LSM
Sbjct: 301 QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALDHDIQPI--SSTHSELSM 360

Query: 361 IIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELF 420
           IIASGPYTTTDN+LFEPLTELLAYA+RK PQLLILLGPFVDSEHSDIKRG VEMS EE+F
Sbjct: 361 IIASGPYTTTDNILFEPLTELLAYAKRKPPQLLILLGPFVDSEHSDIKRGTVEMSFEEIF 420

Query: 421 NFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGIL 480
            FE+LRRVQDY EHMGPDARVLLMPS+RDANH  VFPQPAFDIPS+L+LQ+S LPNPGIL
Sbjct: 421 KFEVLRRVQDYVEHMGPDARVLLMPSIRDANHDFVFPQPAFDIPSDLRLQVSSLPNPGIL 480

Query: 481 EANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVP 540
           EANQ KIACCT DILRHLSGEELSRNLTKG+ NDRLSTLASHILRQRSFYPLYPPAEGVP
Sbjct: 481 EANQAKIACCTMDILRHLSGEELSRNLTKGTANDRLSTLASHILRQRSFYPLYPPAEGVP 540

Query: 541 LDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGG 600
           LDFSLA +ALDISVIPDILILPSDMKHFVKVISLGEG ++EERA+CVCVNPGRLAKGEGG
Sbjct: 541 LDFSLAPKALDISVIPDILILPSDMKHFVKVISLGEGRADEERANCVCVNPGRLAKGEGG 600

Query: 601 GTFVELSYFGAPDQINAAVVSI 623
           GTFVEL YFG PD++NAAVVSI
Sbjct: 601 GTFVELKYFGTPDKLNAAVVSI 620

[Close]

BLAST of Moc09g41340 vs. ExPASy TrEMBL
Match: A0A0A0LQA4 (DNA polymerase alpha subunit B OS=Cucumis sativus OX=3659 GN=Csa_1G039840 PE=3 SV=1)

HSP 1 Score: 1083.9 bits (2802), Expect = 0.0e+00
Identity = 543/622 (87.30%), Postives = 572/622 (91.96%), Query Frame = 0


Query: 1   MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQI 60
           MEEEIG EFKRSGFTFDEEEEILKKC+TFCVNYNLKPSDIVSSWEVYYLNR LDGSVV++
Sbjct: 118 MEEEIGEEFKRSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRLLDGSVVEL 177

Query: 61  SQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH 120
            Q+DGFLQHLQNEQK+ VIKGEPDLH+YSSKDVD+ILNDE+ED NEDILKTPNGKSQSLH
Sbjct: 178 EQLDGFLQHLQNEQKETVIKGEPDLHVYSSKDVDVILNDENEDLNEDILKTPNGKSQSLH 237

Query: 121 KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED 180
           KER D TPYTNEGLFSSGKPSKH TPFGQR EKFVVRF+IN +PD  T  K DN ENDED
Sbjct: 238 KERLDLTPYTNEGLFSSGKPSKHETPFGQRTEKFVVRFNINNMPDMVTAVKVDNSENDED 297

Query: 181 AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSASGQYEE 240
            IIKKV+PLQGCSLTV GSG GLE N RFM+DK EDR NALDNRIM++AKAL+ASG YEE
Sbjct: 298 TIIKKVRPLQGCSLTVHGSGFGLEPNCRFMYDKDEDRFNALDNRIMRHAKALAASGLYEE 357

Query: 241 AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG 300
           AVDPT ASQKS+FAVGMI CDGEGHLNDKS LLQ S  HSGGQRVRLELQNL+QFSIFPG
Sbjct: 358 AVDPTVASQKSIFAVGMIYCDGEGHLNDKSILLQSSIAHSGGQRVRLELQNLSQFSIFPG 417

Query: 301 QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSM 360
           QVVGIEGHNPSGHCLIASKLVD FPLSAT+DPILPPAKK ALNHDIQP++QSST S+LSM
Sbjct: 418 QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM 477

Query: 361 IIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELF 420
           IIASGPYTTTDNLLFEPLTELLAYA+RK+PQLLILLGPFVDSEHSDIKRG VEMS EE+F
Sbjct: 478 IIASGPYTTTDNLLFEPLTELLAYAKRKVPQLLILLGPFVDSEHSDIKRGTVEMSFEEIF 537

Query: 421 NFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGIL 480
            FE+LRRVQDYAEHMGPDARVLLMPS RDANH   FPQPAFDIPS+LKLQIS  PNP IL
Sbjct: 538 KFEVLRRVQDYAEHMGPDARVLLMPSTRDANHDFAFPQPAFDIPSDLKLQISSPPNPCIL 597

Query: 481 EANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEGVP 540
           EANQ KIACCT DILRHLSGEELSRNLTKG TNDRLSTLASHILRQRSFYPLYPPAEGVP
Sbjct: 598 EANQAKIACCTMDILRHLSGEELSRNLTKGGTNDRLSTLASHILRQRSFYPLYPPAEGVP 657

Query: 541 LDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGG 600
           LDFSLA +ALDISVIPDILILPSDMKHFVKVISLGEGGSEEE+A CVCVNPGRLAKGEGG
Sbjct: 658 LDFSLAPQALDISVIPDILILPSDMKHFVKVISLGEGGSEEEQARCVCVNPGRLAKGEGG 717

Query: 601 GTFVELSYFGAPDQINAAVVSI 623
           GTFVEL+YFG PDQINA VVSI
Sbjct: 718 GTFVELNYFGRPDQINAMVVSI 739

[Close]

BLAST of Moc09g41340 vs. TAIR 10
Match: AT1G67630.1 (DNA polymerase alpha 2 )

HSP 1 Score: 734.2 bits (1894), Expect = 8.8e-212
Identity = 374/624 (59.94%), Postives = 481/624 (77.08%), Query Frame = 0


Query: 2   EEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQIS 61
           +EEI  EFKRSGF   EE+EILK+C+T C+NY+LKPSD+VSSWE+Y+LNRQL    V+  
Sbjct: 4   DEEIKNEFKRSGFILVEEDEILKRCVTLCINYSLKPSDLVSSWELYHLNRQLLDQTVKKD 63

Query: 62  QMDGFLQHLQNEQKQAVIK-GEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLH 121
            MDGF+ HLQNEQK+++++  E  LH+YS++DVDM+L+   EDT E+I+ TP  KSQ LH
Sbjct: 64  DMDGFVLHLQNEQKESIMRVEEAGLHLYSNRDVDMLLDGVQEDT-EEIVTTPTNKSQRLH 123

Query: 122 KERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDED 181
            + FDS   + +  +S+GK   HVTPFG R EKFVV+F++  V  +      ++ EN ED
Sbjct: 124 PDPFDSISRSRDYGYSTGKSVGHVTPFGSRIEKFVVKFNVGNVAAHAENGNNNDVENSED 183

Query: 182 AIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSASGQYEE 241
            IIK+VQ  Q CSL V  +GSG E   RFM+D+ EDR +AL+ RI+++A A +ASG YEE
Sbjct: 184 DIIKRVQTSQRCSLKV--NGSGPEPGCRFMYDRTEDRFSALEYRIVRHADAFAASGLYEE 243

Query: 242 AVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPG 301
            VDP  ASQ+S+FAVGMICCDGEGHLNDKS LLQ S E + GQRV ++L+ L+QFSIFPG
Sbjct: 244 QVDPAVASQRSIFAVGMICCDGEGHLNDKSILLQSSAERTSGQRVPVDLKRLDQFSIFPG 303

Query: 302 QVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDI-QPMDQSSTQSKLS 361
           QVVGIEG NPSGH L ASKL+D  PL+ TVD  LPPAK++ L+ ++  P ++S  +S++S
Sbjct: 304 QVVGIEGQNPSGHYLTASKLLDSVPLTLTVDVDLPPAKRQILDQEVLVPAEESCQKSEVS 363

Query: 362 MIIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEEL 421
            IIASGP+TT+DNLLFEPL ELLAYA+RK PQLL+LLGPFVDSEH +IK+G V+ +  E+
Sbjct: 364 FIIASGPFTTSDNLLFEPLNELLAYAKRKPPQLLVLLGPFVDSEHPEIKKGAVDATFNEI 423

Query: 422 FNFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIP-SELKLQISCLPNPG 481
           F  E+LR++QDY E MG + RV+L+PS+RDANH  +FPQP FDI   +L+ Q++ L NPG
Sbjct: 424 FQVEVLRKLQDYVEFMGSEVRVVLVPSIRDANHDFIFPQPPFDIHIPDLEHQMTSLSNPG 483

Query: 482 ILEANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRSFYPLYPPAEG 541
             EANQVK++CCT D+L+ LSGEE+S+N   G   DR+S LASH+LRQRSFYPLYPP E 
Sbjct: 484 TFEANQVKVSCCTVDVLKQLSGEEMSKN-PSGVPTDRMSRLASHLLRQRSFYPLYPPPES 543

Query: 542 VPLDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGE 601
           +P D SLA +AL IS IPDIL+LPSDM++FVK++SLGE   EE+ A CVCVNPGRLAKGE
Sbjct: 544 LPYDSSLAPKALQISSIPDILLLPSDMRYFVKILSLGE---EEDAAKCVCVNPGRLAKGE 603

Query: 602 GGGTFVELSYFGAPDQINAAVVSI 623
           G GTFVEL+Y G P+ ++A+++SI
Sbjct: 604 GAGTFVELTYKGGPESMHASIISI 620

The following BLAST results are available for this feature:

BLAST of Moc09g41340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151967.1	0.0e+00	100.00	DNA polymerase alpha subunit B isoform X1 [Momordica charantia]	[more]
XP_022151968.1	0.0e+00	99.36	DNA polymerase alpha subunit B isoform X2 [Momordica charantia]	[more]
XP_023541613.1	0.0e+00	87.14	DNA polymerase alpha subunit B [Cucurbita pepo subsp. pepo]	[more]
XP_022944938.1	0.0e+00	86.98	DNA polymerase alpha subunit B [Cucurbita moschata]	[more]
KAG6573664.1	0.0e+00	86.66	DNA polymerase alpha subunit B, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Moc09g41340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q14181	2.0e-67	29.43	DNA polymerase alpha subunit B OS=Homo sapiens OX=9606 GN=POLA2 PE=1 SV=2	[more]
P33611	4.3e-62	27.78	DNA polymerase alpha subunit B OS=Mus musculus OX=10090 GN=Pola2 PE=1 SV=2	[more]
O89043	4.3e-62	27.97	DNA polymerase alpha subunit B OS=Rattus norvegicus OX=10116 GN=Pola2 PE=1 SV=2	[more]
Q58D13	2.9e-58	27.41	DNA polymerase alpha subunit B OS=Bos taurus OX=9913 GN=POLA2 PE=2 SV=1	[more]
O74946	3.5e-48	33.25	DNA polymerase alpha subunit B OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]

BLAST of Moc09g41340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DEX3	0.0e+00	100.00	DNA polymerase alpha subunit B OS=Momordica charantia OX=3673 GN=LOC111019803 PE...	[more]
A0A6J1DDL1	0.0e+00	99.36	DNA polymerase alpha subunit B OS=Momordica charantia OX=3673 GN=LOC111019803 PE...	[more]
A0A6J1FZE8	0.0e+00	86.98	DNA polymerase alpha subunit B OS=Cucurbita moschata OX=3662 GN=LOC111449321 PE=...	[more]
A0A6J1HSI8	0.0e+00	86.66	DNA polymerase alpha subunit B OS=Cucurbita maxima OX=3661 GN=LOC111466380 PE=3 ...	[more]
A0A0A0LQA4	0.0e+00	87.30	DNA polymerase alpha subunit B OS=Cucumis sativus OX=3659 GN=Csa_1G039840 PE=3 S...	[more]

BLAST of Moc09g41340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67630.1	8.8e-212	59.94	DNA polymerase alpha 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.60.21.60		coord: 340..512 e-value: 1.2E-41 score: 144.2 coord: 513..618 e-value: 2.5E-19 score: 71.1
IPR016722	DNA polymerase alpha, subunit B	PIRSF	PIRSF018300	DNA_pol_alpha_2	coord: 1..614 e-value: 3.5E-175 score: 581.9
IPR016722	DNA polymerase alpha, subunit B	PANTHER	PTHR23061	DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT	coord: 1..622
IPR013627	DNA polymerase alpha, subunit B, N-terminal	PFAM	PF08418	Pol_alpha_B_N	coord: 21..240 e-value: 2.8E-8 score: 34.1
IPR043034	DNA polymerase alpha, subunit B, N-terminal domain superfamily	GENE3D	1.10.8.530		coord: 1..77 e-value: 3.9E-7 score: 31.6
IPR007185	DNA polymerase alpha/delta/epsilon, subunit B	PFAM	PF04042	DNA_pol_E_B	coord: 361..570 e-value: 1.2E-38 score: 132.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g41340.1	Moc09g41340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding