Moc09g39850 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g39850
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr9: 30490342 .. 30491053 (-)
RNA-Seq ExpressionMoc09g39850
SyntenyMoc09g39850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAGATTTGGTGCTGTGTTTCTGTGCTGCGCCAGTCGCCAAATAACTGGGAGAGGTAAACTTTTTTCGAGCCTCCGTGCTTCATCTTCTCGAGGGAACTGTTCGAATTCGACGACTAAGTTCCATGTATGCTCGTTCTCCATCTCCGATACGTCAATACCATGCTCGAAAAGAAGCAAAAAAGAAGAGTTGGAGGGGACAATAAACAGTTCAGTTCAGTTCGGTCCGAAGAAGGATTCATGTACTCTTACGAGGTTCGTATTCGTTCATCGCCCCATTTTCATTCCTACAGTTTGTTTTACTTAAACTATCCATTTACTTGAAGGGAGAGTTTATAGGATATGGTCAAAATTTGTCTCTAGGAAAGTGGATTATCATAATTTATCTAAAATCATGGCGCAGAAACATACACATTCCCCGGAAGCTGTGGCTGGTTAAATTAATAATGATGCATATGACCGGAAGGCGAGTTTCGGAAACAGGGCAAGCAAAGGGTAGAACGATTAATTTTATTTTGAAGGTAAAGTGAGTGGAGGAAATCGAAATCACATGGATAGCTTAAATCAAATGTGTCTTGTCAATCGAGCCATCACTGATATCTTTACATATCTACTTTTGCAGTTCATGGATAAAGTGGAAAATCATGAGCCTAATAAAATGCAATGTCATTTGGTTTACGAATCCCACGGCAGTTACAATTACGGCGTAA

mRNA sequence

ATGACAAGATTTGGTGCTGTGTTTCTGTGCTGCGCCAGTCGCCAAATAACTGGGAGAGGTAAACTTTTTTCGAGCCTCCGTGCTTCATCTTCTCGAGGGAACTGTTCGAATTCGACGACTAAGTTCCATGTATGCTCGTTCTCCATCTCCGATACGTCAATACCATGCTCGAAAAGAAGCAAAAAAGAAGAGTTGGAGGGGACAATAAACAGTTCAGTTCAGTTCGGTCCGAAGAAGGATTCATGTACTCTTACGAGTTCATGGATAAAGTGGAAAATCATGAGCCTAATAAAATGCAATGTCATTTGGTTTACGAATCCCACGGCAGTTACAATTACGGCGTAA

Coding sequence (CDS)

ATGACAAGATTTGGTGCTGTGTTTCTGTGCTGCGCCAGTCGCCAAATAACTGGGAGAGGTAAACTTTTTTCGAGCCTCCGTGCTTCATCTTCTCGAGGGAACTGTTCGAATTCGACGACTAAGTTCCATGTATGCTCGTTCTCCATCTCCGATACGTCAATACCATGCTCGAAAAGAAGCAAAAAAGAAGAGTTGGAGGGGACAATAAACAGTTCAGTTCAGTTCGGTCCGAAGAAGGATTCATGTACTCTTACGAGTTCATGGATAAAGTGGAAAATCATGAGCCTAATAAAATGCAATGTCATTTGGTTTACGAATCCCACGGCAGTTACAATTACGGCGTAA

Protein sequence

MTRFGAVFLCCASRQITGRGKLFSSLRASSSRGNCSNSTTKFHVCSFSISDTSIPCSKRSKKEELEGTINSSVQFGPKKDSCTLTSSWIKWKIMSLIKCNVIWFTNPTAVTITA
Homology
[Close]
BLAST of Moc09g39850 vs. NCBI nr
Match: XP_022151263.1 (uncharacterized protein LOC111019226 [Momordica charantia])

HSP 1 Score: 169.1 bits (427), Expect = 2.2e-38
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 1  MTRFGAVFLCCASRQITGRGKLFSSLRASSSRGNCSNSTTKFHVCSFSISDTSIPCSKRS 60
          MTRFGAVFLCCASRQITGRGKLFSSLRASSSRGNCSNSTTKFHVCSFSISDTSIPCSKRS
Sbjct: 1  MTRFGAVFLCCASRQITGRGKLFSSLRASSSRGNCSNSTTKFHVCSFSISDTSIPCSKRS 60

Query: 61 KKEELEGTINSSVQFGPKKDSCTLT 86
          KKEELEGTINSSVQFGPKKDSCTLT
Sbjct: 61 KKEELEGTINSSVQFGPKKDSCTLT 85

[Close]
BLAST of Moc09g39850 vs. ExPASy TrEMBL
Match: A0A6J1DBQ2 (uncharacterized protein LOC111019226 OS=Momordica charantia OX=3673 GN=LOC111019226 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.1e-38
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 1  MTRFGAVFLCCASRQITGRGKLFSSLRASSSRGNCSNSTTKFHVCSFSISDTSIPCSKRS 60
          MTRFGAVFLCCASRQITGRGKLFSSLRASSSRGNCSNSTTKFHVCSFSISDTSIPCSKRS
Sbjct: 1  MTRFGAVFLCCASRQITGRGKLFSSLRASSSRGNCSNSTTKFHVCSFSISDTSIPCSKRS 60

Query: 61 KKEELEGTINSSVQFGPKKDSCTLT 86
          KKEELEGTINSSVQFGPKKDSCTLT
Sbjct: 61 KKEELEGTINSSVQFGPKKDSCTLT 85

The following BLAST results are available for this feature:
BLAST of Moc09g39850 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022151263.12.2e-38100.00uncharacterized protein LOC111019226 [Momordica charantia][more]
BLAST of Moc09g39850 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc09g39850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DBQ21.1e-38100.00uncharacterized protein LOC111019226 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
BLAST of Moc09g39850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g39850.1Moc09g39850.1mRNA