Moc09g38430 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g38430
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	RNase H domain-containing protein
Location	chr9: 29576468 .. 29579326 (-)
RNA-Seq Expression	Moc09g38430
Synteny	Moc09g38430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCGCCCATCCCGACGGGTTCGGGGATCCAGTCTCGTACGTTGAGATGTTTGAGGGAAATATGGATTTTTTTGGCCGCAAGCGACGCTATGAAATACCGAGCATTCCAAATAGCTCTGGAAGGCTCGACGAGATTATGGTACCGACAGCTGAAGCCCAGGTCAATCGACAGTTATCAACAGATGAGAAGGTTGTTCATCAATCAGTTCTCAGCTCGGCAGTTATTGAAGTTGCCGCCTTCCCACCTCGGAACAGTGAAGCAACAGGACAACAAGTCCCTTACGGAGTACATCGCTCGGTTCATAGACGAGGATGTCAAGGTGGTGAGTTGTACCAACGACATTGTCATGACCGAGCTCGCCAGTATATTGATGGCCTGGAGTTGTAGAAGGCCAACGGAGCCAGGCGAAGCAGCCGCGATAAAGTTCAAGACCAGAAGTCTCCCCGTTCCAAGAAGCGACGTAGTGATGATCGAAGTTTGTCTCGACGAACTGACGACGACAAGAATAGAGGTCTGCGTGAATGCCTCAATCGTGGAGACCTACACAGCAGTCGAAGACACCGACATGGAGGCGCTGTTCACAGCCTCAGAAAAGCTCAAGCTCCACCAACCCTTGGGAAAGCGGGACAAACAACTCTACTACCGATTCCATAAGGATCACGACCACGATACCTCCCGTTGCTTTCATCTGAAGGAGCAGGTCGAGGATTTGATCCGGAGAGGTTATTTGAAGAAGTATTTCGGCAGTAGAGAACAAGCTGAGCCAGAGGGATCAGCTCGGGAGGAGAAGCGAGAGAGATCACAGCCGCCCAGACGAAAGGGAGATCGCCCTGCCGTTATAAACACCATTCACGGGGTCCGAGCGGGGGACAGTCAGGGTAGAAAACAAAAGCTTTAGCCCGAGAAGCAACACATGAGGTCTGTACCTCGTACTCTAAGGAGCCCGCGATGCCGATATTATTCGACGAGCAGGACGGTGAAGGGATGCATATGCCCCATAATGACGCTTTGATAATCGCCGGCGGAAACTATTAGCACGTAAGTAAATTATTTTCAAATAAGGACAAAAGTAAGTAGCACGTAGAACATCTATTAGCCAAAAGTAAATTGTAAATTAAAACATTAAAGGATTTTTAAATGTTTATCTTAATGGTTAACTATTTTATAATTTTAAATTTATATATTTGTCTCTTCCTCATTGTAGGTGCATGGTATGGGCCGATCACCATCTTCCTCGCTTATTAGAGACCTGCGACTCATCATGCCAATAGTCCACATCGCCAGGTCATCTTCATTTGTTTCTTCTCTTCAATTCAACGGTCGACATCTCCCAGATTTTCCGTTGAATTTCACAGGTTGGTCACGAACTAATTAGAGTGAGCCGTCGAAGTGCAATCTCAAGTGACAGAGGGATCTATACAGAAAACAAACTCTCTGACACCCAAAGTAGAGTGAGCTGGATCAGTTATAGTAGATCGTTTTCGGATAGAAGTTGCGTACCTGATATGTAGAGTGGAGTGTCCCTTTTATAGGCAAGCGGGAGAGACAAGATTGTTGGAACCATTCCGATCAGCGGTTACGATTGTTTGGCCCCCAGGTCCGTAGTTGGACACGTGGAGTGGTTCCTTAGATTGGTGGTGAGTGACAATTCTTCTCAGCTCTATATAACGTCAGTTTGGCGAGTATTGATAATCCTTTTTATCCATTCCGATGACTTCGAGTTGAGTTGGAACATACACATGTTGATTCTTAATTTTACCACCAACAATGTCTTTTAGCAAGTGAAGGAGGAAAATATAGCAAAGGATGGGAGGCTAATGGGAGAGAAGAAGGGGAGAGAAGAAAAAAAATATGGGAAAAAGAAAAAAAGAAAAAAAAAAGAGTGAAAAAAAATATGCATTAGTTGTCAAATGTTTCGTAAATATAAATATTTATAGGAAAATCATGTAAAATCCCCATTAAAACGTATCCCAGTAGAAAAAAGAATCCTTTGGCTAGTTTAAAACTTTGGCAAAATGGTTTAAAGACGACATGTCGACCCTCCTCCTTCGGCCCGGGCTTGGGACCGGCTGTGTTAAAAACACAGGCGGAGTTACATTTTCATTTTAAGATCTTCAAAATTTTAATTATTGAATATTTTAAAATGATATAAAACTTCAGTTGATTTTGATTTAATCTGATATCAATTTTTCATGTTTCAAATGTTTAAAATTAAAATAAATTTGTTTAACTTTTTTTTCCTTCCAAATTAGGGTAAACAAATTTATTTTTAATTTTGGAATATCGTCAATTCGTCATTGATTTGAATCGATTCTCCGAAACCCGCATTAGTTGAAGAGCGAGAATGCGAAGGAGTTACATTTTCATTTTAAGATCTTCAAAAATTTAATTATTGAAGACCTTAAAATGATATAAACTTCAGTTTATTTTGATTTAATCTGAAATTAATTTTTCATGTTTCAAATGTTTAAAATTAAATTAAATTTGTTTACCCTTTTTTCCTTCCAAATTAAATTTTGGAGTACCCTCAATTCGTGGTTGATTGGAATCGGTTCTCCAGAACCCGCATCAGTTGAAGAGCGAGAATGAGAAGGCCGCCATTGACAGAGCAAACACCGGCCAACTTATCCAGCAAAACCTCGCCGGAAGGAAGGCGGTCGCCATTAGGAAGAAGATAATGCAGGTTAAAACCGAACCAAATTTCTCGAGTTTGTTTCCGAATCTTGGAAAGGAATTTCGAAGAGTAACGCCACAAAACGAAACTCCAAAGCTTATCACCACCATTACCTCTGCAATCTGTAGGGACAGAGAAGGTGGAATCTGTGAAGAAACGACCAATCCAATGGCGGCCTGA

mRNA sequence

ATGGACGCGCCCATCCCGACGGGTTCGGGGATCCAGTCTCGTACGTTGAGATGTTTGAGGGAAATATGGATTTTTTTGGCCGCAAGCGACGCTATGAAATACCGAGCATTCCAAATAGCTCTGGAAGGCTCGACGAGATTATGGTACCGACAGCTGAAGCCCAGGTCAATCGACAGTTATCAACAGATGAGAAGGTTGTTCATCAATCAGTTCTCAGCTCGGCAGTTATTGAAGTTGCCGCCTTCCCACCTCGGAACAGTGAAGCAACAGGACAACAAGTCCCTTACGGAGTACATCGCTCGGTTCATAGACGAGGATGTCAAGGTGGTGAGTTGTACCAACGACATTGTCATGACCGAGCTCGCCAGTATATTGATGGCCTGGAGTTGTAGAAGGCCAACGGAGCCAGGCGAAGCAGCCGCGATAAAGTTCAAGACCAGAAGTCTCCCCGTTCCAAGAAGCGACGTAGTGATGATCGAAGTTTGTCTCGACGAACTGACGACGACAAGAATAGAGGTCTGCGTGAATGCCTCAATCGTGGAGACCTACACAGCAGTCGAAGACACCGACATGGAGGCGCTGTTCACAGCCTCAGAAAAGCTCAAGCTCCACCAACCCTTGGGAAAGCGGGACAAACAACTCTACTACCGATTCCATAAGGATCACGACCACGATACCTCCCGTTGCTTTCATCTGAAGGAGCAGGTCGAGGATTTGATCCGGAGAGGTTATTTGAAGAAGTATTTCGGCAGTAGAGAACAAGCTGAGCCAGAGGGATCAGCTCGGGAGGAGAAGCGAGAGAGATCACAGCCGCCCAGACGAAAGGGAGATCGCCCTGCCGTTATAAACACCATTCACGGGGTGCATGGTATGGGCCGATCACCATCTTCCTCGCTTATTAGAGACCTGCGACTCATCATGCCAATAGTCCACATCGCCAGGTCATCTTCATTTGTTTCTTCTCTTCAATTCAACGGTCGACATCTCCCAGATTTTCCGTTGAATTTCACAGGCAAGCGGGAGAGACAAGATTGTTGGAACCATTCCGATCAGCGGTTACGATTGTTTGGCCCCCAGAACCCGCATCAGTTGAAGAGCGAGAATGAGAAGGCCGCCATTGACAGAGCAAACACCGGCCAACTTATCCAGCAAAACCTCGCCGGAAGGAAGGCGGTCGCCATTAGGAAGAAGATAATGCAGGTTAAAACCGAACCAAATTTCTCGAGTTTGTTTCCGAATCTTGGAAAGGAATTTCGAAGAGTAACGCCACAAAACGAAACTCCAAAGCTTATCACCACCATTACCTCTGCAATCTGTAGGGACAGAGAAGGTGGAATCTGTGAAGAAACGACCAATCCAATGGCGGCCTGA

Coding sequence (CDS)

ATGGACGCGCCCATCCCGACGGGTTCGGGGATCCAGTCTCGTACGTTGAGATGTTTGAGGGAAATATGGATTTTTTTGGCCGCAAGCGACGCTATGAAATACCGAGCATTCCAAATAGCTCTGGAAGGCTCGACGAGATTATGGTACCGACAGCTGAAGCCCAGGTCAATCGACAGTTATCAACAGATGAGAAGGTTGTTCATCAATCAGTTCTCAGCTCGGCAGTTATTGAAGTTGCCGCCTTCCCACCTCGGAACAGTGAAGCAACAGGACAACAAGTCCCTTACGGAGTACATCGCTCGGTTCATAGACGAGGATGTCAAGGTGGTGAGTTGTACCAACGACATTGTCATGACCGAGCTCGCCAGTATATTGATGGCCTGGAGTTGTAGAAGGCCAACGGAGCCAGGCGAAGCAGCCGCGATAAAGTTCAAGACCAGAAGTCTCCCCGTTCCAAGAAGCGACGTAGTGATGATCGAAGTTTGTCTCGACGAACTGACGACGACAAGAATAGAGGTCTGCGTGAATGCCTCAATCGTGGAGACCTACACAGCAGTCGAAGACACCGACATGGAGGCGCTGTTCACAGCCTCAGAAAAGCTCAAGCTCCACCAACCCTTGGGAAAGCGGGACAAACAACTCTACTACCGATTCCATAAGGATCACGACCACGATACCTCCCGTTGCTTTCATCTGAAGGAGCAGGTCGAGGATTTGATCCGGAGAGGTTATTTGAAGAAGTATTTCGGCAGTAGAGAACAAGCTGAGCCAGAGGGATCAGCTCGGGAGGAGAAGCGAGAGAGATCACAGCCGCCCAGACGAAAGGGAGATCGCCCTGCCGTTATAAACACCATTCACGGGGTGCATGGTATGGGCCGATCACCATCTTCCTCGCTTATTAGAGACCTGCGACTCATCATGCCAATAGTCCACATCGCCAGGTCATCTTCATTTGTTTCTTCTCTTCAATTCAACGGTCGACATCTCCCAGATTTTCCGTTGAATTTCACAGGCAAGCGGGAGAGACAAGATTGTTGGAACCATTCCGATCAGCGGTTACGATTGTTTGGCCCCCAGAACCCGCATCAGTTGAAGAGCGAGAATGAGAAGGCCGCCATTGACAGAGCAAACACCGGCCAACTTATCCAGCAAAACCTCGCCGGAAGGAAGGCGGTCGCCATTAGGAAGAAGATAATGCAGGTTAAAACCGAACCAAATTTCTCGAGTTTGTTTCCGAATCTTGGAAAGGAATTTCGAAGAGTAACGCCACAAAACGAAACTCCAAAGCTTATCACCACCATTACCTCTGCAATCTGTAGGGACAGAGAAGGTGGAATCTGTGAAGAAACGACCAATCCAATGGCGGCCTGA

Protein sequence

MDAPIPTGSGIQSRTLRCLREIWIFLAASDAMKYRAFQIALEGSTRLWYRQLKPRSIDSYQQMRRLFINQFSARQLLKLPPSHLGTVKQQDNKSLTEYIARFIDEDVKVVSCTNDIVMTELASILMAWSCRRPTEPGEAAAIKFKTRSLPVPRSDVVMIEVCLDELTTTRIEVCVNASIVETYTAVEDTDMEALFTASEKLKLHQPLGKRDKQLYYRFHKDHDHDTSRCFHLKEQVEDLIRRGYLKKYFGSREQAEPEGSAREEKRERSQPPRRKGDRPAVINTIHGVHGMGRSPSSSLIRDLRLIMPIVHIARSSSFVSSLQFNGRHLPDFPLNFTGKRERQDCWNHSDQRLRLFGPQNPHQLKSENEKAAIDRANTGQLIQQNLAGRKAVAIRKKIMQVKTEPNFSSLFPNLGKEFRRVTPQNETPKLITTITSAICRDREGGICEETTNPMAA

Homology

[Close]

BLAST of Moc09g38430 vs. NCBI nr
Match: XP_022149029.1 (uncharacterized protein LOC111017548 [Momordica charantia])

HSP 1 Score: 298.5 bits (763), Expect = 9.7e-77
Identity = 178/310 (57.42%), Postives = 208/310 (67.10%), Query Frame = 0


Query: 25  FLAASDAMKYRAFQIALEGSTRLWYRQLKPRSIDSYQQMRRLFINQFSARQLLKLPPSHL 84
           FLAASDA+K RAFQIALEGS RLWY+QLKPRSIDSYQQ+RRLFINQFSARQLLKLPPSHL
Sbjct: 3   FLAASDAIKCRAFQIALEGSVRLWYQQLKPRSIDSYQQLRRLFINQFSARQLLKLPPSHL 62

Query: 85  GTVKQQDNKSLTEYIARFIDEDVKVVSCTNDIVMTELA------SILMAWSCRRPTE--- 144
            TVKQ+DN+SLTEYIAR +DE VKVVSCT+DI M          ++ + +  R P     
Sbjct: 63  ETVKQRDNESLTEYIARLMDEHVKVVSCTDDIAMMYFTTGLNDRNLTIEFGSRPPASLNK 122

Query: 145 -----------------PGEAAAIKFKTR----SLPVPR--SDVVMIEVCLDELTTTRIE 204
                             G   + + K R    S P  R   D       +D+ +  + +
Sbjct: 123 MLARARQYIDGLELWKAKGARRSSRGKDRDQRSSPPKKRHSDDQSSSRQAVDDRSRGQCD 182

Query: 205 ---------------VCVNASIVETYTAVEDTDMEALFTASEKLKLHQPLGKRDKQLYYR 264
                            +NAS+ E Y  VE+TDM+ALFTA +  KLH+P GKRDK+LY R
Sbjct: 183 ERGSSDRWGPKFDKFTPLNASVAEIYATVENTDMKALFTAPK--KLHRPSGKRDKRLYCR 242

Query: 265 FHKDHDHDTSRCFHLKEQVEDLIRRGYLKKYFGSREQAEPEGSAREEKRERSQPPRRKGD 288
           FHKDH H++SRCFHLKEQV+DLIRRGYLKKY GSRE+A+PEGS REEKRERSQPP RK D
Sbjct: 243 FHKDHGHNSSRCFHLKEQVKDLIRRGYLKKYVGSRERAKPEGSTREEKRERSQPPGRKED 302

[Close]

BLAST of Moc09g38430 vs. NCBI nr
Match: XP_022152851.1 (uncharacterized protein LOC111020475 [Momordica charantia])

HSP 1 Score: 261.5 bits (667), Expect = 1.3e-65
Identity = 160/282 (56.74%), Postives = 184/282 (65.25%), Query Frame = 0


Query: 25  FLAASDAMKYRAFQIALEGSTRLWYRQLKPRSIDSYQQMRRLFINQFSARQLLKLPPSHL 84
           FLA SDAMK  AFQI LEGSTRLWYRQLK RSIDSYQQ+RRLFINQFS RQ LKLP SHL
Sbjct: 23  FLAVSDAMKCGAFQITLEGSTRLWYRQLKLRSIDSYQQLRRLFINQFSTRQFLKLPLSHL 82

Query: 85  GTVKQQDNKSLTEYIARFIDEDVKVVSCTNDIVMTELA------SILMAWSCRRPT---- 144
           GTVKQ+DN+S T YIARF+DE VKVVSCT+DI M          ++ + +   +P     
Sbjct: 83  GTVKQRDNESFTVYIARFMDEHVKVVSCTDDIAMMYFTTGLNDRNLTIEFGSYQPAYLNE 142

Query: 145 ------------------EPGEAAAIKFKTRSLPVPRSDVVMIEVCLDELTTTRIEVCVN 204
                                E AA++  T SL  PRS  VMIE+ L EL TTRI+V + 
Sbjct: 143 MFARARQYIDGLELWNADGADEVAAVETGTTSLHPPRSGAVMIEIHLGELMTTRIKVGMR 202

Query: 205 ASIVETYTAVEDTDMEALFTASEKLKLHQPLGKRDKQLYYRFHKDHDHDTSRCFHLKEQV 264
                ++  V    +E         KL +P GKRDK+LY RFHKD  HDTSRCFHLKEQV
Sbjct: 203 KG---SFQIVAGQTLE---------KLRRPSGKRDKRLYCRFHKDPGHDTSRCFHLKEQV 262

Query: 265 EDLIRRGYLKKYFGSREQAEPEGSAREEKRERSQPPRRKGDR 279
           EDLIRRGYLKKY G+ E+A PE SA EEKRERSQ P+R+ DR
Sbjct: 263 EDLIRRGYLKKYVGNIERALPEESAWEEKRERSQSPKRREDR 292

[Close]

BLAST of Moc09g38430 vs. NCBI nr
Match: XP_022158844.1 (uncharacterized protein LOC111025310 [Momordica charantia])

HSP 1 Score: 171.4 bits (433), Expect = 1.8e-38
Identity = 90/113 (79.65%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 175 VNASIVETYTAVEDTDMEALFTASEKLKLHQPLGKRDKQLYYRFHKDHDHDTSRCFHLKE 234
           +NASI E Y  VEDTDME LF + EKL+  +P GKR+K+LY RFHKDH HDTSRCFHLKE
Sbjct: 120 LNASIAEIYAVVEDTDMEVLFASPEKLR--RPSGKRNKRLYCRFHKDHGHDTSRCFHLKE 179

Query: 235 QVEDLIRRGYLKKYFGSREQAEPEGSAREEKRERSQPPRRKGDRPAVINTIHG 288
           QVEDLIR GYLKKY GSREQAE EGSAREEKRERSQPPR K DRPAVINTIHG
Sbjct: 180 QVEDLIRIGYLKKYVGSREQAELEGSAREEKRERSQPPRPKEDRPAVINTIHG 230

[Close]

BLAST of Moc09g38430 vs. NCBI nr
Match: XP_022158414.1 (uncharacterized protein LOC111024904 [Momordica charantia])

HSP 1 Score: 159.5 bits (402), Expect = 7.1e-35
Identity = 121/354 (34.18%), Postives = 174/354 (49.15%), Query Frame = 0


Query: 25  FLAASDAMKYRAFQIALEGSTRLWYRQLKPRSIDSYQQMRRLFINQFSARQLLKLPPSHL 84
           F AA+DA+K RAFQIAL GS RLWYR+L  RSI +Y Q+R+ FI+QFS+    +   +HL
Sbjct: 3   FQAATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSWHYDRKTATHL 62

Query: 85  GTVKQQDNKSLTEYIARFIDEDVKVVSCTNDIVM----TELA------------------ 144
            T++Q++ ++L EY+ RF +E +KV  C++D  M    T LA                  
Sbjct: 63  ATIRQKERETLREYVTRFQEEQLKVAHCSDDSAMCYFLTSLADETLTVKLGEEAPTTFVE 122

Query: 145 -----------SILMAWSCRRPTEPGEAAAIKFKTR-----------SLPVPRSDVVMIE 204
                        L+     RP +  +   +  + R           S    R++   +E
Sbjct: 123 VLQKAKKVIDGQELLRTKTGRPEKQIDQKKLSQEKRKADSKSRDKGSSSSASRTEYRRLE 182

Query: 205 VCLDELTTTRIEVCVNASIVETYTAVEDTDMEALFTASEKLKLHQPLGKRDKQLYYRFHK 264
                             I E  T +E++ ME L    EKL+    L KR+K+ Y RFH+
Sbjct: 183 SGPSRSRPYERYTSSTIPISEILTNIEESGMEKLLKRPEKLR--GDLEKRNKEKYCRFHR 242

Query: 265 DHDHDTSRCFHLKEQVEDLIRRGYLKKYFGSREQAEPEGSAREEKRERSQPPRRKGDRPA 324
           DH H+T+ C+ LK Q+EDLI+ GY KK+ G       E   ++E+R+RS+ P R+ DRPA
Sbjct: 243 DHGHNTTSCWELKRQIEDLIQDGYFKKFVGKPRSNSVE---KKEERKRSRTPPRREDRPA 302

Query: 325 VINTIHGVHGMGRSPS--SSLIRDLRLIMPIV--HIARSSSFVSSLQFNGRHLP 331
           VINTI G    G+S +    L R+ R  + I+  H    S         G HLP
Sbjct: 303 VINTIFGGPNGGQSGNKRKELAREARREVCIIREHKPTCSITFGDADLEGVHLP 351

[Close]

BLAST of Moc09g38430 vs. NCBI nr
Match: XP_022150613.1 (uncharacterized protein LOC111018708, partial [Momordica charantia])

HSP 1 Score: 154.5 bits (389), Expect = 2.3e-33
Identity = 115/313 (36.74%), Postives = 159/313 (50.80%), Query Frame = 0


Query: 25  FLAASDAMKYRAFQIALEGSTRLWYRQLKPRSIDSYQQMRRLFINQFSARQLLKLPPSHL 84
           F AASDA+K RAFQIAL GS RLWYR+L  RSI +Y Q+RR F+ QFS+RQ  K   +HL
Sbjct: 98  FHAASDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRQYGKKTETHL 157

Query: 85  GTVKQQDNKSLTEYIARFIDEDVKVVSCTNDIVM---------------------TELAS 144
            T++Q++  +L EY+ RF +E +KV  C++D  M                     T  A 
Sbjct: 158 ATIRQKEGGTLREYVTRFQEEQLKVAHCSDDSAMCYFLTGLADEALTVKLGEKAPTTFAE 217

Query: 145 I------------LMAWSCRRPT---------EPGEAAAIKFKTR-SLPVPRSDVVMIEV 204
           +            L+     RP          +  E A  K K + S    R++    E 
Sbjct: 218 VLQKAKKVIDGQELLRTKTGRPDRKIGRGRSGKDVERADPKSKDKGSFSSGRAEYRRAES 277

Query: 205 CLDELTTTRIEVCVNASIVETYTAVEDTDMEALFTASEKLKLHQPLGKRDKQLYYRFHKD 264
              +             I E  T +E++ ME L    EKL+      +R K  Y RFH++
Sbjct: 278 GPTKSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLR--GAPERRSKDKYCRFHRE 337

Query: 265 HDHDTSRCFHLKEQVEDLIRRGYLKKYFGSREQAEPEGSAREEKRERSQPPRRKGDRPAV 295
           H H+TS C+ LK Q+EDLI+ GY KK+ G    +  E   ++E+R+RS+ P R+ DRPAV
Sbjct: 338 HGHNTSDCWELKRQIEDLIQDGYFKKFVGKPRTSSAE---KKEERKRSRTPPRRTDRPAV 397

[Close]

BLAST of Moc09g38430 vs. ExPASy TrEMBL
Match: A0A6J1D5T3 (uncharacterized protein LOC111017548 OS=Momordica charantia OX=3673 GN=LOC111017548 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 4.7e-77
Identity = 178/310 (57.42%), Postives = 208/310 (67.10%), Query Frame = 0


Query: 25  FLAASDAMKYRAFQIALEGSTRLWYRQLKPRSIDSYQQMRRLFINQFSARQLLKLPPSHL 84
           FLAASDA+K RAFQIALEGS RLWY+QLKPRSIDSYQQ+RRLFINQFSARQLLKLPPSHL
Sbjct: 3   FLAASDAIKCRAFQIALEGSVRLWYQQLKPRSIDSYQQLRRLFINQFSARQLLKLPPSHL 62

Query: 85  GTVKQQDNKSLTEYIARFIDEDVKVVSCTNDIVMTELA------SILMAWSCRRPTE--- 144
            TVKQ+DN+SLTEYIAR +DE VKVVSCT+DI M          ++ + +  R P     
Sbjct: 63  ETVKQRDNESLTEYIARLMDEHVKVVSCTDDIAMMYFTTGLNDRNLTIEFGSRPPASLNK 122

Query: 145 -----------------PGEAAAIKFKTR----SLPVPR--SDVVMIEVCLDELTTTRIE 204
                             G   + + K R    S P  R   D       +D+ +  + +
Sbjct: 123 MLARARQYIDGLELWKAKGARRSSRGKDRDQRSSPPKKRHSDDQSSSRQAVDDRSRGQCD 182

Query: 205 ---------------VCVNASIVETYTAVEDTDMEALFTASEKLKLHQPLGKRDKQLYYR 264
                            +NAS+ E Y  VE+TDM+ALFTA +  KLH+P GKRDK+LY R
Sbjct: 183 ERGSSDRWGPKFDKFTPLNASVAEIYATVENTDMKALFTAPK--KLHRPSGKRDKRLYCR 242

Query: 265 FHKDHDHDTSRCFHLKEQVEDLIRRGYLKKYFGSREQAEPEGSAREEKRERSQPPRRKGD 288
           FHKDH H++SRCFHLKEQV+DLIRRGYLKKY GSRE+A+PEGS REEKRERSQPP RK D
Sbjct: 243 FHKDHGHNSSRCFHLKEQVKDLIRRGYLKKYVGSRERAKPEGSTREEKRERSQPPGRKED 302

[Close]

BLAST of Moc09g38430 vs. ExPASy TrEMBL
Match: A0A6J1DIZ8 (uncharacterized protein LOC111020475 OS=Momordica charantia OX=3673 GN=LOC111020475 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 6.4e-66
Identity = 160/282 (56.74%), Postives = 184/282 (65.25%), Query Frame = 0


Query: 25  FLAASDAMKYRAFQIALEGSTRLWYRQLKPRSIDSYQQMRRLFINQFSARQLLKLPPSHL 84
           FLA SDAMK  AFQI LEGSTRLWYRQLK RSIDSYQQ+RRLFINQFS RQ LKLP SHL
Sbjct: 23  FLAVSDAMKCGAFQITLEGSTRLWYRQLKLRSIDSYQQLRRLFINQFSTRQFLKLPLSHL 82

Query: 85  GTVKQQDNKSLTEYIARFIDEDVKVVSCTNDIVMTELA------SILMAWSCRRPT---- 144
           GTVKQ+DN+S T YIARF+DE VKVVSCT+DI M          ++ + +   +P     
Sbjct: 83  GTVKQRDNESFTVYIARFMDEHVKVVSCTDDIAMMYFTTGLNDRNLTIEFGSYQPAYLNE 142

Query: 145 ------------------EPGEAAAIKFKTRSLPVPRSDVVMIEVCLDELTTTRIEVCVN 204
                                E AA++  T SL  PRS  VMIE+ L EL TTRI+V + 
Sbjct: 143 MFARARQYIDGLELWNADGADEVAAVETGTTSLHPPRSGAVMIEIHLGELMTTRIKVGMR 202

Query: 205 ASIVETYTAVEDTDMEALFTASEKLKLHQPLGKRDKQLYYRFHKDHDHDTSRCFHLKEQV 264
                ++  V    +E         KL +P GKRDK+LY RFHKD  HDTSRCFHLKEQV
Sbjct: 203 KG---SFQIVAGQTLE---------KLRRPSGKRDKRLYCRFHKDPGHDTSRCFHLKEQV 262

Query: 265 EDLIRRGYLKKYFGSREQAEPEGSAREEKRERSQPPRRKGDR 279
           EDLIRRGYLKKY G+ E+A PE SA EEKRERSQ P+R+ DR
Sbjct: 263 EDLIRRGYLKKYVGNIERALPEESAWEEKRERSQSPKRREDR 292

[Close]

BLAST of Moc09g38430 vs. ExPASy TrEMBL
Match: A0A6J1E0L8 (uncharacterized protein LOC111025310 OS=Momordica charantia OX=3673 GN=LOC111025310 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 8.7e-39
Identity = 90/113 (79.65%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 175 VNASIVETYTAVEDTDMEALFTASEKLKLHQPLGKRDKQLYYRFHKDHDHDTSRCFHLKE 234
           +NASI E Y  VEDTDME LF + EKL+  +P GKR+K+LY RFHKDH HDTSRCFHLKE
Sbjct: 120 LNASIAEIYAVVEDTDMEVLFASPEKLR--RPSGKRNKRLYCRFHKDHGHDTSRCFHLKE 179

Query: 235 QVEDLIRRGYLKKYFGSREQAEPEGSAREEKRERSQPPRRKGDRPAVINTIHG 288
           QVEDLIR GYLKKY GSREQAE EGSAREEKRERSQPPR K DRPAVINTIHG
Sbjct: 180 QVEDLIRIGYLKKYVGSREQAELEGSAREEKRERSQPPRPKEDRPAVINTIHG 230

[Close]

BLAST of Moc09g38430 vs. ExPASy TrEMBL
Match: A0A6J1D9W7 (uncharacterized protein LOC111018708 OS=Momordica charantia OX=3673 GN=LOC111018708 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-33
Identity = 115/313 (36.74%), Postives = 159/313 (50.80%), Query Frame = 0


Query: 25  FLAASDAMKYRAFQIALEGSTRLWYRQLKPRSIDSYQQMRRLFINQFSARQLLKLPPSHL 84
           F AASDA+K RAFQIAL GS RLWYR+L  RSI +Y Q+RR F+ QFS+RQ  K   +HL
Sbjct: 98  FHAASDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRQYGKKTETHL 157

Query: 85  GTVKQQDNKSLTEYIARFIDEDVKVVSCTNDIVM---------------------TELAS 144
            T++Q++  +L EY+ RF +E +KV  C++D  M                     T  A 
Sbjct: 158 ATIRQKEGGTLREYVTRFQEEQLKVAHCSDDSAMCYFLTGLADEALTVKLGEKAPTTFAE 217

Query: 145 I------------LMAWSCRRPT---------EPGEAAAIKFKTR-SLPVPRSDVVMIEV 204
           +            L+     RP          +  E A  K K + S    R++    E 
Sbjct: 218 VLQKAKKVIDGQELLRTKTGRPDRKIGRGRSGKDVERADPKSKDKGSFSSGRAEYRRAES 277

Query: 205 CLDELTTTRIEVCVNASIVETYTAVEDTDMEALFTASEKLKLHQPLGKRDKQLYYRFHKD 264
              +             I E  T +E++ ME L    EKL+      +R K  Y RFH++
Sbjct: 278 GPTKSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLR--GAPERRSKDKYCRFHRE 337

Query: 265 HDHDTSRCFHLKEQVEDLIRRGYLKKYFGSREQAEPEGSAREEKRERSQPPRRKGDRPAV 295
           H H+TS C+ LK Q+EDLI+ GY KK+ G    +  E   ++E+R+RS+ P R+ DRPAV
Sbjct: 338 HGHNTSDCWELKRQIEDLIQDGYFKKFVGKPRTSSAE---KKEERKRSRTPPRRTDRPAV 397

[Close]

BLAST of Moc09g38430 vs. ExPASy TrEMBL
Match: A0A6J1D7S8 (uncharacterized protein LOC111017807 OS=Momordica charantia OX=3673 GN=LOC111017807 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-33
Identity = 119/355 (33.52%), Postives = 178/355 (50.14%), Query Frame = 0


Query: 25  FLAASDAMKYRAFQIALEGSTRLWYRQLKPRSIDSYQQMRRLFINQFSARQLLKLPPSHL 84
           F AA+DA+K RAFQIAL G  RLWYR+L  RSI +Y Q+R+ FI+QF +R   +   +HL
Sbjct: 49  FQAATDAIKCRAFQIALTGXARLWYRRLPARSISTYSQLRKEFISQFXSRHYDRKTATHL 108

Query: 85  GTVKQQDNKSLTEYIARFIDEDVKVVSCTNDIVM----TELASILMAWSCRRPTEPGEAA 144
            T++Q++ ++L EY+ RF +E +KVV C++D  M    T LA   +         P   A
Sbjct: 109 ATIRQKEXETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTVKLGEEA-PATFA 168

Query: 145 AIKFKTRSL-----------PVPRSDVVMIEVCLDELTT------------------TRI 204
            +  K + +             P   +   ++  ++  T                   R+
Sbjct: 169 EVLQKAKKVIDGQELLRTKTGRPEKQIDQKKLIQEKRKTDSKSRDKGSSSSASRAEHRRL 228

Query: 205 EVCVNAS------------IVETYTAVEDTDMEALFTASEKLKLHQPLGKRDKQLYYRFH 264
           E   + S            I E  T +E++ ME L  + EKL+      KR K    RFH
Sbjct: 229 ESGPSRSRPYERYTPTTILISEILTNIEESGMEKLLKSPEKLRGDPE--KRSKDKNCRFH 288

Query: 265 KDHDHDTSRCFHLKEQVEDLIRRGYLKKYFGSREQAEPEGSAREEKRERSQPPRRKGDRP 324
           +DHDH+T+ C+ LK Q+EDLI+ GY KK+ G       E   ++E+R+RS+ P R+ DRP
Sbjct: 289 RDHDHNTTSCWELKRQIEDLIQDGYFKKFVGKPRSNSVE---KKEERKRSRTPPRRDDRP 348

Query: 325 AVINTIHGVHGMGRSPS--SSLIRDLRLIMPIVHIARSSSFVS--SLQFNGRHLP 331
           AVINTI G    G+S +    L R+ R  + I+   + +  ++       G HLP
Sbjct: 349 AVINTIFGGPSGGQSGNKRKELAREARREVCIIREQKPTCSITFDDADLEGVHLP 397

The following BLAST results are available for this feature:

BLAST of Moc09g38430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149029.1	9.7e-77	57.42	uncharacterized protein LOC111017548 [Momordica charantia]	[more]
XP_022152851.1	1.3e-65	56.74	uncharacterized protein LOC111020475 [Momordica charantia]	[more]
XP_022158844.1	1.8e-38	79.65	uncharacterized protein LOC111025310 [Momordica charantia]	[more]
XP_022158414.1	7.1e-35	34.18	uncharacterized protein LOC111024904 [Momordica charantia]	[more]
XP_022150613.1	2.3e-33	36.74	uncharacterized protein LOC111018708, partial [Momordica charantia]	[more]

BLAST of Moc09g38430 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc09g38430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5T3	4.7e-77	57.42	uncharacterized protein LOC111017548 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DIZ8	6.4e-66	56.74	uncharacterized protein LOC111020475 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1E0L8	8.7e-39	79.65	uncharacterized protein LOC111025310 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1D9W7	1.1e-33	36.74	uncharacterized protein LOC111018708 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1D7S8	1.4e-33	33.52	uncharacterized protein LOC111017807 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]

BLAST of Moc09g38430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 37..102 e-value: 3.5E-9 score: 36.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..275
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..293

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g38430.1	Moc09g38430.1	mRNA