Moc09g37840 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g37840
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionHeavy metal-associated domain containing protein
Locationchr9: 29092782 .. 29093479 (+)
RNA-Seq ExpressionMoc09g37840
SyntenyMoc09g37840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAGCGGGCAAAAAAGAAGGCGGCGGTGATCGGAGTTCGGAAGCCAAGGATTTTCCCCCATGCTTCTAGCCTTGCCTCCATCGAATCCTTATCTCTGCCTCTTGTCTCTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGCATTTATTTTGAAGTCTCGTGACTGAAATTAATTGATTTTTTGTTATGGTCCATGCTCTGATTTCCAGGTCCAGGAAATCGTCTTGACAGCCGATATTCGATGCCCTGAATGCCAAAACAAATTGGCGAATATACTCTCCAAAATTAACGGTGAGTTTCTGTTTTGGGGATTTTTTTGGTCTCTGCCTCTGGGGAATTTGATTCCATCCTTCAATTTTAATGGTAACAAATTTCCCTTCCCTGGTTCATACCACAATAAGAAAATTTTCCATTAATACTTAATAGAATTGGTTATTTTTTTTGGGTAATGCACGGAAAAGGGTAGTTTGTTAACTAAACAAGGTTATTGAAATTAAATTGATGCCAAACTTGTTCTGATTCGAGCACTTTTTGTTTGGGTACAGATACAGAGTCTGTGGTGGTGAATTTGTTGGAGAAGAAAGTGATATTAACTCGAAGATTGCAAGTTCCGTCCACGTGCAGCAATTCTTCGAGTAAAGTTGCAACAATCAAGAGATTGCTTGGTTCATCCTTCAGATAA

mRNA sequence

ATGGCGGAGCGGGCAAAAAAGAAGGCGGCGGTGATCGGAGTTCGGAAGCCAAGGATTTTCCCCCATGCTTCTAGCCTTGCCTCCATCGAATCCTTATCTCTGCCTCTTGTCCAGGAAATCGTCTTGACAGCCGATATTCGATGCCCTGAATGCCAAAACAAATTGGCGAATATACTCTCCAAAATTAACGATACAGAGTCTGTGGTGGTGAATTTGTTGGAGAAGAAAGTGATATTAACTCGAAGATTGCAAGTTCCGTCCACGTGCAGCAATTCTTCGAGTAAAGTTGCAACAATCAAGAGATTGCTTGGTTCATCCTTCAGATAA

Coding sequence (CDS)

ATGGCGGAGCGGGCAAAAAAGAAGGCGGCGGTGATCGGAGTTCGGAAGCCAAGGATTTTCCCCCATGCTTCTAGCCTTGCCTCCATCGAATCCTTATCTCTGCCTCTTGTCCAGGAAATCGTCTTGACAGCCGATATTCGATGCCCTGAATGCCAAAACAAATTGGCGAATATACTCTCCAAAATTAACGATACAGAGTCTGTGGTGGTGAATTTGTTGGAGAAGAAAGTGATATTAACTCGAAGATTGCAAGTTCCGTCCACGTGCAGCAATTCTTCGAGTAAAGTTGCAACAATCAAGAGATTGCTTGGTTCATCCTTCAGATAA

Protein sequence

MAERAKKKAAVIGVRKPRIFPHASSLASIESLSLPLVQEIVLTADIRCPECQNKLANILSKINDTESVVVNLLEKKVILTRRLQVPSTCSNSSSKVATIKRLLGSSFR
Homology
BLAST of Moc09g37840 vs. NCBI nr
Match: XP_022150612.1 (uncharacterized protein LOC111018707 [Momordica charantia])

HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0

Query: 1   MAERAKKKAAVIGVRKPRIFPHASSLASIESLSLPLVQEIVLTADIRCPECQNKLANILS 60
           MAERAKKKAAVIGVRKPRIFPHASSLASIESLSLPLVQEIVLTADIRCPECQNKLANILS
Sbjct: 1   MAERAKKKAAVIGVRKPRIFPHASSLASIESLSLPLVQEIVLTADIRCPECQNKLANILS 60

Query: 61  KINDTESVVVNLLEKKVILTRRLQVPSTCSNSSSKVATIKRLLGSSFR 109
           KINDTESVVVNLLEKKVILTRRLQVPSTCSNSSSKVATIKRLLGSSFR
Sbjct: 61  KINDTESVVVNLLEKKVILTRRLQVPSTCSNSSSKVATIKRLLGSSFR 108

BLAST of Moc09g37840 vs. NCBI nr
Match: XP_022968296.1 (uncharacterized protein LOC111467567 isoform X3 [Cucurbita maxima])

HSP 1 Score: 146.7 bits (369), Expect = 1.1e-31
Identity = 85/111 (76.58%), Postives = 93/111 (83.78%), Query Frame = 0

Query: 1   MAERAKKKAAV---IGVRKPRIFPHASSLASIESLSLPLVQEIVLTADIRCPECQNKLAN 60
           MAER  K AA    IGVRK +IFPHASSLASIESLSLPLVQEIV TADI C ECQ KLAN
Sbjct: 1   MAERPNKAAAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFTADIGCAECQKKLAN 60

Query: 61  ILSKINDTESVVVNLLEKKVILTRRLQVPSTCSNSSSKVATIKRLLGSSFR 109
           ILSK+NDTESVVVNLL+KKVILTR+LQ+P      SS+V+T+KRLLGSSFR
Sbjct: 61  ILSKMNDTESVVVNLLDKKVILTRKLQIP------SSRVSTVKRLLGSSFR 105

BLAST of Moc09g37840 vs. NCBI nr
Match: KAG7013033.1 (hypothetical protein SDJN02_25789 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 143.3 bits (360), Expect = 1.2e-30
Identity = 83/110 (75.45%), Postives = 92/110 (83.64%), Query Frame = 0

Query: 1   MAERAKKKAAV--IGVRKPRIFPHASSLASIESLSLPLVQEIVLTADIRCPECQNKLANI 60
           MAER  K AA   IGVRK +IFPHASSLASIESLSLPLVQEIV  ADI C ECQ KLANI
Sbjct: 1   MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANI 60

Query: 61  LSKINDTESVVVNLLEKKVILTRRLQVPSTCSNSSSKVATIKRLLGSSFR 109
           L+K+NDTESVVVNLL+KKVILTR+LQ+P      +S+V+TIKRLLGSSFR
Sbjct: 61  LAKMNDTESVVVNLLDKKVILTRKLQIP------TSRVSTIKRLLGSSFR 104

BLAST of Moc09g37840 vs. NCBI nr
Match: XP_023542320.1 (uncharacterized protein LOC111802252 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142.9 bits (359), Expect = 1.6e-30
Identity = 83/111 (74.77%), Postives = 92/111 (82.88%), Query Frame = 0

Query: 1   MAERAKKKAAV---IGVRKPRIFPHASSLASIESLSLPLVQEIVLTADIRCPECQNKLAN 60
           MAER  K AA    IGVRK +IFPHASSLASIESLSLPLVQEIV  ADI C ECQ KLAN
Sbjct: 1   MAERPNKAAAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLAN 60

Query: 61  ILSKINDTESVVVNLLEKKVILTRRLQVPSTCSNSSSKVATIKRLLGSSFR 109
           IL+K+NDTESVVVNLL+KKVILTR+LQ+P      +S+V+TIKRLLGSSFR
Sbjct: 61  ILAKMNDTESVVVNLLDKKVILTRKLQIP------TSRVSTIKRLLGSSFR 105

BLAST of Moc09g37840 vs. NCBI nr
Match: KAG6573976.1 (hypothetical protein SDJN03_27863, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 141.7 bits (356), Expect = 3.6e-30
Identity = 82/110 (74.55%), Postives = 91/110 (82.73%), Query Frame = 0

Query: 1   MAERAKKKAAV--IGVRKPRIFPHASSLASIESLSLPLVQEIVLTADIRCPECQNKLANI 60
           MAER  K AA   IGVRK +IFPHASSLASIESLSLPLVQEIV  ADI C ECQ KLANI
Sbjct: 1   MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANI 60

Query: 61  LSKINDTESVVVNLLEKKVILTRRLQVPSTCSNSSSKVATIKRLLGSSFR 109
           L+K+NDTESVVVNLL+KKVILTR+LQ+P      +S+ +TIKRLLGSSFR
Sbjct: 61  LAKMNDTESVVVNLLDKKVILTRKLQIP------TSRASTIKRLLGSSFR 104

BLAST of Moc09g37840 vs. ExPASy TrEMBL
Match: A0A6J1DB71 (uncharacterized protein LOC111018707 OS=Momordica charantia OX=3673 GN=LOC111018707 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.1e-48
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0

Query: 1   MAERAKKKAAVIGVRKPRIFPHASSLASIESLSLPLVQEIVLTADIRCPECQNKLANILS 60
           MAERAKKKAAVIGVRKPRIFPHASSLASIESLSLPLVQEIVLTADIRCPECQNKLANILS
Sbjct: 1   MAERAKKKAAVIGVRKPRIFPHASSLASIESLSLPLVQEIVLTADIRCPECQNKLANILS 60

Query: 61  KINDTESVVVNLLEKKVILTRRLQVPSTCSNSSSKVATIKRLLGSSFR 109
           KINDTESVVVNLLEKKVILTRRLQVPSTCSNSSSKVATIKRLLGSSFR
Sbjct: 61  KINDTESVVVNLLEKKVILTRRLQVPSTCSNSSSKVATIKRLLGSSFR 108

BLAST of Moc09g37840 vs. ExPASy TrEMBL
Match: A0A6J1HUG9 (uncharacterized protein LOC111467567 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111467567 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 5.4e-32
Identity = 85/111 (76.58%), Postives = 93/111 (83.78%), Query Frame = 0

Query: 1   MAERAKKKAAV---IGVRKPRIFPHASSLASIESLSLPLVQEIVLTADIRCPECQNKLAN 60
           MAER  K AA    IGVRK +IFPHASSLASIESLSLPLVQEIV TADI C ECQ KLAN
Sbjct: 1   MAERPNKAAAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFTADIGCAECQKKLAN 60

Query: 61  ILSKINDTESVVVNLLEKKVILTRRLQVPSTCSNSSSKVATIKRLLGSSFR 109
           ILSK+NDTESVVVNLL+KKVILTR+LQ+P      SS+V+T+KRLLGSSFR
Sbjct: 61  ILSKMNDTESVVVNLLDKKVILTRKLQIP------SSRVSTVKRLLGSSFR 105

BLAST of Moc09g37840 vs. ExPASy TrEMBL
Match: A0A6J1G188 (uncharacterized protein LOC111449743 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111449743 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.9e-29
Identity = 80/108 (74.07%), Postives = 90/108 (83.33%), Query Frame = 0

Query: 1   MAERAKKKAAV-IGVRKPRIFPHASSLASIESLSLPLVQEIVLTADIRCPECQNKLANIL 60
           MAER  K AA  IGVRK +IFPHASSLAS+ESLSLPLVQEIV  ADI C ECQ KLANIL
Sbjct: 1   MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVQEIVFAADIGCAECQKKLANIL 60

Query: 61  SKINDTESVVVNLLEKKVILTRRLQVPSTCSNSSSKVATIKRLLGSSF 108
           +K+NDTESVVVNLL+KKVILTR+LQ+       +S+V+TIKRLLGSSF
Sbjct: 61  AKMNDTESVVVNLLDKKVILTRKLQI------QTSRVSTIKRLLGSSF 102

BLAST of Moc09g37840 vs. ExPASy TrEMBL
Match: A0A0A0KT62 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608570 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.8e-27
Identity = 74/97 (76.29%), Postives = 81/97 (83.51%), Query Frame = 0

Query: 12  IGVRKPRIFPHASSLASIESLSLPLVQEIVLTADIRCPECQNKLANILSKINDTESVVVN 71
           IGVRK RIFPHASSLASIESL+LPLVQEIVLTADI C ECQ KLANILSK+NDTESVVVN
Sbjct: 8   IGVRKKRIFPHASSLASIESLTLPLVQEIVLTADIGCAECQKKLANILSKMNDTESVVVN 67

Query: 72  LLEKKVILTRRLQVPSTCSNSSSKVATIKRLLGSSFR 109
           LL+KKVILTRR Q+P       S+V+TI+RL  S  R
Sbjct: 68  LLDKKVILTRRSQIP-------SRVSTIRRLFASPCR 97

BLAST of Moc09g37840 vs. ExPASy TrEMBL
Match: A0A6J1G176 (uncharacterized protein LOC111449743 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449743 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.9e-25
Identity = 80/135 (59.26%), Postives = 90/135 (66.67%), Query Frame = 0

Query: 1   MAERAKKKAAV-IGVRKPRIFPHASSLASIESLSLPL----------------------- 60
           MAER  K AA  IGVRK +IFPHASSLAS+ESLSLPL                       
Sbjct: 1   MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWS 60

Query: 61  ----VQEIVLTADIRCPECQNKLANILSKINDTESVVVNLLEKKVILTRRLQVPSTCSNS 108
               VQEIV  ADI C ECQ KLANIL+K+NDTESVVVNLL+KKVILTR+LQ+       
Sbjct: 61  VILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQI------Q 120

BLAST of Moc09g37840 vs. TAIR 10
Match: AT1G68585.1 (unknown protein; Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 3.9e-14
Identity = 42/85 (49.41%), Postives = 62/85 (72.94%), Query Frame = 0

Query: 24  SSLASIESLSLPLVQEIVLTADIRCPECQNKLANILSKINDTESVVVNLLEKKVILTRRL 83
           +SLAS+ SLS+PL+QEIVL+ADIRC +CQ K+A+I++++ +T S++V++LEKKV LT   
Sbjct: 26  TSLASVASLSMPLIQEIVLSADIRCSDCQEKVADIMARMIETYSILVSVLEKKVTLTCTY 85

Query: 84  QVPSTCSNSSS-----KVATIKRLL 104
                 S S       K++TIKRL+
Sbjct: 86  SGDRRVSKSYGEALLCKISTIKRLI 110

BLAST of Moc09g37840 vs. TAIR 10
Match: AT2G35730.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 42.7 bits (99), Expect = 2.1e-04
Identity = 23/57 (40.35%), Postives = 37/57 (64.91%), Query Frame = 0

Query: 25 SLASIESLSLPLVQEIVLTADIRCPECQNKLANILSKINDTESVVVNLLEKKVILTR 82
          +L   E LSLP  Q I + AD+ C  CQ++++ I+SK+   E  VV+ L+KK+++ R
Sbjct: 10 TLMLCEKLSLPSFQVIEINADVGCVACQDRVSKIVSKMTGIEEYVVD-LKKKLVMAR 65

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022150612.11.5e-47100.00uncharacterized protein LOC111018707 [Momordica charantia][more]
XP_022968296.11.1e-3176.58uncharacterized protein LOC111467567 isoform X3 [Cucurbita maxima][more]
KAG7013033.11.2e-3075.45hypothetical protein SDJN02_25789 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023542320.11.6e-3074.77uncharacterized protein LOC111802252 [Cucurbita pepo subsp. pepo][more]
KAG6573976.13.6e-3074.55hypothetical protein SDJN03_27863, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DB717.1e-48100.00uncharacterized protein LOC111018707 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1HUG95.4e-3276.58uncharacterized protein LOC111467567 isoform X3 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1G1881.9e-2974.07uncharacterized protein LOC111449743 isoform X3 OS=Cucurbita moschata OX=3662 GN... [more]
A0A0A0KT621.8e-2776.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608570 PE=4 SV=1[more]
A0A6J1G1764.9e-2559.26uncharacterized protein LOC111449743 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
AT1G68585.13.9e-1449.41unknown protein; Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bact... [more]
AT2G35730.12.1e-0440.35Heavy metal transport/detoxification superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.100coord: 36..102
e-value: 4.0E-5
score: 25.8
NoneNo IPR availablePANTHERPTHR47294OS08G0431150 PROTEINcoord: 4..88
NoneNo IPR availablePANTHERPTHR47294:SF4PROTEIN, PUTATIVE-RELATEDcoord: 4..88
IPR036163Heavy metal-associated domain superfamilySUPERFAMILY55008HMA, heavy metal-associated domaincoord: 37..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g37840.1Moc09g37840.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding