Moc09g37090 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g37090
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DNA repair REX1-B protein
Location	chr9: 28564859 .. 28567267 (+)
RNA-Seq Expression	Moc09g37090
Synteny	Moc09g37090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATTTTGACAATAAGCTCTCTCTGGCTGAACCCATGGAGATGGAGGAAGATCAAGAATTCGGGGCCACCGATCCCTCCAACACTCTTGGTTTGCTCCGCAAGTTTCTTGAAATCCAGCAGCGTAGAGCGGAAGCTTATGCCAAGCTTAAGAGGTAACATTCATTTGATTTTCGTTTCAATTCTTTTTCAATGTTCTCGAAAATCAATGAAGAATTCCATAGCTTGAGTGATAAGTATGGCGTATTTCTGTCGTAGTTCTTTCATACCGCAAGATTTTGTCCTAAAGCATGTTTAAGATACATTTTCTTTCATAGTTATTCCATGAAGTTTCGAGAATTTGTGTTAGACCTAAATGAATTCAGCGGCAAAACTTCTAGGTATGGAATTCTTGGAAGTCTTTACCATTCTTTTTGATTCGCAGGGGTTTCGATGAGTATATGACTTCAGGAAGGGAAGTATCTTACCAACAACTTTGCAGTGAGATCACGACGGAGTTCAATTATTGCTCTAAACAAGTTTGTTTTACAATTTCATACCATTTCGTTGGGTCCTAGTCTTCGTTGAGCCTGTTTCCTTATGAGTTTTTCCCTTTCTGGACTCTCTTTTGTTGTAGGTCATTGACATTGAGTCAGATTTCCGGAATCCTGATCACAGCAGGCTCGAGTTAGCTGACCTGCTTAGATCTGTTCAATTACAGGAGAAGCAGAAATTGCACCTGGTATGCTACGTCCAGAAAGTCTTTAAAATGTCTTGAAATTTGTTTTTAAGCATCCTATCCTCTGCAAAGAATAAGCTTGACGAGTAAGATTCTTTTAAACTATAAACAAATGACGTGATTTCTCAGAATCCTAATTGGTCAGTTAAACTTGTGATTATAAAATTTGGTAGCATTGGTCCGTATATGCTCTGGAAAATCGTTTTGAAACCTTATTTAGTACGGATAATTTAAGTAAGATGACCATTTGGTTTACATTATGATTCAAGGACTGTTGCTGGCTACTTTTTTATAGCCAGTGGATTTTAGATTTTGTTCCAAGAATTATTTCGGTTCTGGTAGGCTGATAGAAAAGGGTTTTTTTTCCCCTCCTCCTGCAGTGATAAAGTATGTTTTTTAGTGATGATGAGCCTTCCATGGTTATTACATGTAAAATCATAAGAGTCCTATAGATTTGATCTAGACTCCTTTACTGTTTCTTATTTCTTTTAAAAATTTTGTTTTGGACTCTCTTAAATGTTTATGTACCATCGTAGTTGTTTTCATACTGCTGATTCCTTTAGCTGTGGTCCACTTTGTCTTAACAAGAACTAGATTTGTCATTTGACAGGTCATTATTTAAGATCTTTTAATTACATACCAGTTTTCCTTTAACTCTATCTTATTAGACAAACATGTTTAGGGCATAAGCAAAAACAATCTTCTATTATCCTGTTTGTCATAAGAAGAATTCAAGCCAAAATAATGTAAGTTGTAGGAGTCTTTTTGTATTTTATGAAAGCTTGATACATTTTTCAAAAAAAAAAAAAAAAGAAGGAGAAAAAAAAGAGAAAAAAAAAGGGCAATGATGGTGAATTTTGACAATCTGAACTGCATACATGATACAACTGACTTCGTTTTATTTTGATGAATTGCACTTCTAAAAGTTAGCCCAAGAAAGGAAAATGATTCAACTACAATGTTGTCTATTACTCATCCGATGGTTATTCAGTTTATAAGAAAATACGAGAAGGAATATCATAGCTGGGGTAGCACATACATTTTCCCCTTTTTTTCTCTCCCCCTTTTTGCCTCTAAACTACTGAACTCGATGTCCTATGTTTTCAGTTACCTACACAAGGTCTTCATTAGTGATATGTAGCTTATCCTTCAATGCATGCACAGTAGTCTAATTGTAATTTTAAATGCAAAAACTCAGTACTGGAAGTCTTCTGGTCATCTTTGATTTATTTGAAGGTTGAAACTTGAGAATGCATATGAATAAGCAGACGAGGAGATAAGGCACATTACCCAGTATTTGTGTTGTGGGTGGGTTTTCTTGGACACGAATGTACTTTTCCCGGTCCGAGACCTCATTATATAAAGTTCAATAGTCGAGATCTTATCATTATCTTTCCCTAACAAGTATTCCTTTAAAGACAGCTCAAATTCAGTTACTGAAGAAGGCTGGCCGTCCATCAGAGCGTTTGGTGAGCCACGAGAATTGCAGATTCAAGACGCCTCGAGAGCACGAGTGCGTGCATGTCCATGAGATAACCGAAGCTTCTGGTACTGAGGAAGCAGAAGCAGATGCCGAATACGACAATTCTCTCAAGGAAGCAATCAAAGGCGTCCAAGATGCTGTGACCACCATAAACGAGCACATGGAGGAAGTGAGATATGAGATTGCAGCTCTTGAAGATGAGTAA

mRNA sequence

ATGGAAGATTTTGACAATAAGCTCTCTCTGGCTGAACCCATGGAGATGGAGGAAGATCAAGAATTCGGGGCCACCGATCCCTCCAACACTCTTGGTTTGCTCCGCAAGTTTCTTGAAATCCAGCAGCGTAGAGCGGAAGCTTATGCCAAGCTTAAGAGGGGTTTCGATGAGTATATGACTTCAGGAAGGGAAGTATCTTACCAACAACTTTGCAGTGAGATCACGACGGAGTTCAATTATTGCTCTAAACAAGTCATTGACATTGAGTCAGATTTCCGGAATCCTGATCACAGCAGGCTCGAGTTAGCTGACCTGCTTAGATCTGTTCAATTACAGGAGAAGCAGAAATTGCACCTGACAGCTCAAATTCAGTTACTGAAGAAGGCTGGCCGTCCATCAGAGCGTTTGGTGAGCCACGAGAATTGCAGATTCAAGACGCCTCGAGAGCACGAGTGCGTGCATGTCCATGAGATAACCGAAGCTTCTGGTACTGAGGAAGCAGAAGCAGATGCCGAATACGACAATTCTCTCAAGGAAGCAATCAAAGGCGTCCAAGATGCTGTGACCACCATAAACGAGCACATGGAGGAAGTGAGATATGAGATTGCAGCTCTTGAAGATGAGTAA

Coding sequence (CDS)

ATGGAAGATTTTGACAATAAGCTCTCTCTGGCTGAACCCATGGAGATGGAGGAAGATCAAGAATTCGGGGCCACCGATCCCTCCAACACTCTTGGTTTGCTCCGCAAGTTTCTTGAAATCCAGCAGCGTAGAGCGGAAGCTTATGCCAAGCTTAAGAGGGGTTTCGATGAGTATATGACTTCAGGAAGGGAAGTATCTTACCAACAACTTTGCAGTGAGATCACGACGGAGTTCAATTATTGCTCTAAACAAGTCATTGACATTGAGTCAGATTTCCGGAATCCTGATCACAGCAGGCTCGAGTTAGCTGACCTGCTTAGATCTGTTCAATTACAGGAGAAGCAGAAATTGCACCTGACAGCTCAAATTCAGTTACTGAAGAAGGCTGGCCGTCCATCAGAGCGTTTGGTGAGCCACGAGAATTGCAGATTCAAGACGCCTCGAGAGCACGAGTGCGTGCATGTCCATGAGATAACCGAAGCTTCTGGTACTGAGGAAGCAGAAGCAGATGCCGAATACGACAATTCTCTCAAGGAAGCAATCAAAGGCGTCCAAGATGCTGTGACCACCATAAACGAGCACATGGAGGAAGTGAGATATGAGATTGCAGCTCTTGAAGATGAGTAA

Protein sequence

MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMTSGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLTAQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEAIKGVQDAVTTINEHMEEVRYEIAALEDE

Homology

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BLAST of Moc09g37090 vs. NCBI nr
Match: XP_022150684.1 (uncharacterized protein LOC111018757 [Momordica charantia])

HSP 1 Score: 404.4 bits (1038), Expect = 5.7e-109
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60
           MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT
Sbjct: 1   MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60

Query: 61  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 120
           SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT
Sbjct: 61  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 180
           AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIAALEDE 209
           IKGVQDAVTTINEHMEEVRYEIAALEDE
Sbjct: 181 IKGVQDAVTTINEHMEEVRYEIAALEDE 208

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BLAST of Moc09g37090 vs. NCBI nr
Match: XP_023541138.1 (uncharacterized protein C19orf60 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 339.0 bits (868), Expect = 3.0e-89
Identity = 177/208 (85.10%), Postives = 189/208 (90.87%), Query Frame = 0


Query: 1   MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60
           MEDFD KLSLAE ME +      ++  SNTL LLRKFLEIQQRRAEAYA+LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 61  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 120
           SGRE+SYQQLC EIT EF+ CSKQVIDIES+F +PDH R+ELA LLRSVQ QEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 180
           AQIQLLKKAGRPSERLVSHENCRFKTPREHEC+HVHEITEASGTEEAEADAEYDN+LKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECLHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIAALEDE 209
           IKGVQDAVTTINEHMEEVRYEIAALED+
Sbjct: 181 IKGVQDAVTTINEHMEEVRYEIAALEDK 208

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BLAST of Moc09g37090 vs. NCBI nr
Match: XP_022945518.1 (uncharacterized protein C19orf60 homolog [Cucurbita moschata] >XP_022968603.1 uncharacterized protein C19orf60 homolog [Cucurbita maxima] >KAG6573912.1 Required for excision 1-B domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 338.6 bits (867), Expect = 3.9e-89
Identity = 177/208 (85.10%), Postives = 189/208 (90.87%), Query Frame = 0


Query: 1   MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60
           MEDFD KLSLAE ME +      ++  SNTL LLRKFLEIQQRRAEAYA+LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 61  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 120
           SGRE+SYQQLC EIT EF+ CSKQVIDIES+F +PDH R+ELA LLRSVQ QEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 180
           AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDN+LKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIAALEDE 209
           IKGVQ+AVTTINEHMEEVRYEIAALED+
Sbjct: 181 IKGVQEAVTTINEHMEEVRYEIAALEDK 208

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BLAST of Moc09g37090 vs. NCBI nr
Match: KAG7012978.1 (hypothetical protein SDJN02_25732 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 337.0 bits (863), Expect = 1.1e-88
Identity = 176/208 (84.62%), Postives = 189/208 (90.87%), Query Frame = 0


Query: 1   MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60
           MEDFD KLSLAE ME +      ++  SNTL LLRKFLEIQQRRAEAYA+LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 61  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 120
           SGRE+SYQQLC EIT EF+ CSKQVIDIES+F +PDH R+ELA LLRSVQ QEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 180
           AQIQLLKKAGRPSERLVSHENCRFKTP+EHECVHVHEITEASGTEEAEADAEYDN+LKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPQEHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIAALEDE 209
           IKGVQ+AVTTINEHMEEVRYEIAALED+
Sbjct: 181 IKGVQEAVTTINEHMEEVRYEIAALEDK 208

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BLAST of Moc09g37090 vs. NCBI nr
Match: XP_008446706.1 (PREDICTED: uncharacterized protein LOC103489347 [Cucumis melo] >KAA0034618.1 uncharacterized protein E6C27_scaffold65G006350 [Cucumis melo var. makuwa] >TYK09169.1 uncharacterized protein E5676_scaffold475G001610 [Cucumis melo var. makuwa])

HSP 1 Score: 335.9 bits (860), Expect = 2.5e-88
Identity = 178/208 (85.58%), Postives = 191/208 (91.83%), Query Frame = 0


Query: 1   MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60
           MEDF+ KLSL E  +MEED+    TD SNTL LLR+FLEIQQRRAEAY+KLKRGFDEYMT
Sbjct: 1   MEDFEKKLSLDE--QMEEDR---GTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMT 60

Query: 61  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 120
           SGRE+SYQQLCSEITTEF+ CSKQVIDIES+FRN DH+RLELA+LLRSVQ QEKQKLHLT
Sbjct: 61  SGREISYQQLCSEITTEFSNCSKQVIDIESNFRNSDHNRLELANLLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 180
           AQIQLLKKAGRPSERLVSHENCR   PREHECVHVHEITEASGTEEAEADAEYDN+LKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRINAPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIAALEDE 209
           IKGVQDAVTTIN+HMEEVRYEI ALED+
Sbjct: 181 IKGVQDAVTTINDHMEEVRYEIEALEDK 203

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BLAST of Moc09g37090 vs. ExPASy Swiss-Prot
Match: Q17Q97 (Required for excision 1-B domain-containing protein OS=Bos taurus OX=9913 GN=REX1BD PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 5.2e-04
Identity = 29/97 (29.90%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 33  LLRKFLEIQQRRAEAYAKLKRGFDEYMTSGREVS---YQQLCSEITTEFNYCSKQVIDIE 92
           L+++  ++Q  RA+A+ +L+ G  +Y++SG       Y+    E+T  F   S++V+ +E
Sbjct: 42  LVQRIHQLQAERAQAFRRLEEGHRQYLSSGPPYDFPRYRSTVHEVTQVFAAASREVLAVE 101

Query: 93  SDFRNPDHSRLELADLLRSVQLQEKQKLHLTAQIQLL 127
           ++   P    L LA  +RS+Q  E+ +L   A +QL+
Sbjct: 102 AELAGPRAQPL-LASHVRSLQQLEETRLTTVALLQLM 137

[Close]

BLAST of Moc09g37090 vs. ExPASy TrEMBL
Match: A0A6J1DAT6 (uncharacterized protein LOC111018757 OS=Momordica charantia OX=3673 GN=LOC111018757 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.8e-109
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60
           MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT
Sbjct: 1   MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60

Query: 61  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 120
           SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT
Sbjct: 61  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 180
           AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIAALEDE 209
           IKGVQDAVTTINEHMEEVRYEIAALEDE
Sbjct: 181 IKGVQDAVTTINEHMEEVRYEIAALEDE 208

[Close]

BLAST of Moc09g37090 vs. ExPASy TrEMBL
Match: A0A6J1HYI6 (uncharacterized protein C19orf60 homolog OS=Cucurbita maxima OX=3661 GN=LOC111467775 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.9e-89
Identity = 177/208 (85.10%), Postives = 189/208 (90.87%), Query Frame = 0


Query: 1   MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60
           MEDFD KLSLAE ME +      ++  SNTL LLRKFLEIQQRRAEAYA+LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 61  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 120
           SGRE+SYQQLC EIT EF+ CSKQVIDIES+F +PDH R+ELA LLRSVQ QEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 180
           AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDN+LKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIAALEDE 209
           IKGVQ+AVTTINEHMEEVRYEIAALED+
Sbjct: 181 IKGVQEAVTTINEHMEEVRYEIAALEDK 208

[Close]

BLAST of Moc09g37090 vs. ExPASy TrEMBL
Match: A0A6J1G147 (uncharacterized protein C19orf60 homolog OS=Cucurbita moschata OX=3662 GN=LOC111449729 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.9e-89
Identity = 177/208 (85.10%), Postives = 189/208 (90.87%), Query Frame = 0


Query: 1   MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60
           MEDFD KLSLAE ME +      ++  SNTL LLRKFLEIQQRRAEAYA+LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 61  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 120
           SGRE+SYQQLC EIT EF+ CSKQVIDIES+F +PDH R+ELA LLRSVQ QEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 180
           AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDN+LKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIAALEDE 209
           IKGVQ+AVTTINEHMEEVRYEIAALED+
Sbjct: 181 IKGVQEAVTTINEHMEEVRYEIAALEDK 208

[Close]

BLAST of Moc09g37090 vs. ExPASy TrEMBL
Match: A0A5D3CFT2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001610 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.2e-88
Identity = 178/208 (85.58%), Postives = 191/208 (91.83%), Query Frame = 0


Query: 1   MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60
           MEDF+ KLSL E  +MEED+    TD SNTL LLR+FLEIQQRRAEAY+KLKRGFDEYMT
Sbjct: 1   MEDFEKKLSLDE--QMEEDR---GTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMT 60

Query: 61  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 120
           SGRE+SYQQLCSEITTEF+ CSKQVIDIES+FRN DH+RLELA+LLRSVQ QEKQKLHLT
Sbjct: 61  SGREISYQQLCSEITTEFSNCSKQVIDIESNFRNSDHNRLELANLLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 180
           AQIQLLKKAGRPSERLVSHENCR   PREHECVHVHEITEASGTEEAEADAEYDN+LKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRINAPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIAALEDE 209
           IKGVQDAVTTIN+HMEEVRYEI ALED+
Sbjct: 181 IKGVQDAVTTINDHMEEVRYEIEALEDK 203

[Close]

BLAST of Moc09g37090 vs. ExPASy TrEMBL
Match: A0A1S3BGI9 (uncharacterized protein LOC103489347 OS=Cucumis melo OX=3656 GN=LOC103489347 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.2e-88
Identity = 178/208 (85.58%), Postives = 191/208 (91.83%), Query Frame = 0


Query: 1   MEDFDNKLSLAEPMEMEEDQEFGATDPSNTLGLLRKFLEIQQRRAEAYAKLKRGFDEYMT 60
           MEDF+ KLSL E  +MEED+    TD SNTL LLR+FLEIQQRRAEAY+KLKRGFDEYMT
Sbjct: 1   MEDFEKKLSLDE--QMEEDR---GTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMT 60

Query: 61  SGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSVQLQEKQKLHLT 120
           SGRE+SYQQLCSEITTEF+ CSKQVIDIES+FRN DH+RLELA+LLRSVQ QEKQKLHLT
Sbjct: 61  SGREISYQQLCSEITTEFSNCSKQVIDIESNFRNSDHNRLELANLLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNSLKEA 180
           AQIQLLKKAGRPSERLVSHENCR   PREHECVHVHEITEASGTEEAEADAEYDN+LKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRINAPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIAALEDE 209
           IKGVQDAVTTIN+HMEEVRYEI ALED+
Sbjct: 181 IKGVQDAVTTINDHMEEVRYEIEALEDK 203

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BLAST of Moc09g37090 vs. TAIR 10
Match: AT5G04910.1 (unknown protein; Has 71 Blast hits to 71 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). )

HSP 1 Score: 256.5 bits (654), Expect = 1.8e-68
Identity = 135/217 (62.21%), Postives = 166/217 (76.50%), Query Frame = 0


Query: 2   EDFDNKLSLAEPMEMEEDQEFGATD------------PSNTLGLLRKFLEIQQRRAEAYA 61
           EDF  K+SL + +  + + E G +              S TL LLR  LEIQQRRA+AYA
Sbjct: 4   EDFQKKVSLRDSLSGDIENECGGSGVGSTSSTVGSGVASQTLVLLRSLLEIQQRRAQAYA 63

Query: 62  KLKRGFDEYMTSGREVSYQQLCSEITTEFNYCSKQVIDIESDFRNPDHSRLELADLLRSV 121
            LK GF EY+ SG E  YQ+LCSEITTEF+ CSKQV ++ES F NP+  R +LA LL  +
Sbjct: 64  NLKSGFSEYVESGAEALYQKLCSEITTEFSECSKQVREMESLFLNPEVGRADLAKLLSDI 123

Query: 122 QLQEKQKLHLTAQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEA 181
           Q QEKQKLHLT  IQ+LKKAGRPSER+++HENC+FK P +HECVH+HEITEA+GTEEAEA
Sbjct: 124 QTQEKQKLHLTVTIQVLKKAGRPSERMLTHENCKFKKPMQHECVHLHEITEAAGTEEAEA 183

Query: 182 DAEYDNSLKEAIKGVQDAVTTINEHMEEVRYEIAALE 207
           DAE+DN+LKEAI+GVQDAVT+INE++E++RYEI ALE
Sbjct: 184 DAEFDNALKEAIRGVQDAVTSINEYLEDIRYEIEALE 220

The following BLAST results are available for this feature:

BLAST of Moc09g37090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150684.1	5.7e-109	100.00	uncharacterized protein LOC111018757 [Momordica charantia]	[more]
XP_023541138.1	3.0e-89	85.10	uncharacterized protein C19orf60 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022945518.1	3.9e-89	85.10	uncharacterized protein C19orf60 homolog [Cucurbita moschata] >XP_022968603.1 un...	[more]
KAG7012978.1	1.1e-88	84.62	hypothetical protein SDJN02_25732 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008446706.1	2.5e-88	85.58	PREDICTED: uncharacterized protein LOC103489347 [Cucumis melo] >KAA0034618.1 unc...	[more]

BLAST of Moc09g37090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q17Q97	5.2e-04	29.90	Required for excision 1-B domain-containing protein OS=Bos taurus OX=9913 GN=REX...	[more]

BLAST of Moc09g37090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAT6	2.8e-109	100.00	uncharacterized protein LOC111018757 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1HYI6	1.9e-89	85.10	uncharacterized protein C19orf60 homolog OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]
A0A6J1G147	1.9e-89	85.10	uncharacterized protein C19orf60 homolog OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A5D3CFT2	1.2e-88	85.58	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BGI9	1.2e-88	85.58	uncharacterized protein LOC103489347 OS=Cucumis melo OX=3656 GN=LOC103489347 PE=...	[more]

BLAST of Moc09g37090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04910.1	1.8e-68	62.21	unknown protein; Has 71 Blast hits to 71 proteins in 36 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 188..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
IPR039491	Required for excision 1-B domain-containing protein	PFAM	PF14966	DNA_repr_REX1B	coord: 33..127 e-value: 3.8E-33 score: 114.0
IPR039491	Required for excision 1-B domain-containing protein	PANTHER	PTHR28309	REQUIRED FOR EXCISION 1-B DOMAIN-CONTAINING PROTEIN	coord: 27..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g37090.1	Moc09g37090.1	mRNA