Moc09g35570 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g35570
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein LATERAL ROOT PRIMORDIUM 1
Location	chr9: 27293530 .. 27294987 (-)
RNA-Seq Expression	Moc09g35570
Synteny	Moc09g35570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAGGACAATGTTGGGTCTCCGAGATGTTCTCTTTATAGCTCCCACGCCTTCTTCTCTCCATCAACAGACAACCCAAATCATTTCCTCCGATCACCACCCATCTCTTCCTCTCCCTTCCTCCGCCGCTCTCGGCGTCAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGTCTCCCTCAGCCGCCGCCGCCGCCGCCCCCGGCCGCCGAAGTTAGCGAGCGCAGGGGTGTGGACAATCTGAAGAGAACCCAGGATTTCGGATTCGGGAAAGGGGATTCGTTGATCGCCGGCGGGAATAATGCCCTCGACGAGCCGGTGAGAGGCGACGCCGGCGATTCCTCCATGGGCGTGTGTAGGGACTGCGGAAACAGAGCCAAAAAGGAGTGCGATTATCGGAGGTGCAGGACGTGTTGTAAAGGGCGTGGGAATCATTGCTCCACGCACGTCAAGAGCACGTGGGTGTCGGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTTGTGATGGACGGCGTCGCCACCGCTAGTGGCGACGGTGGGTCTTCTGGGTCTTCTTCCGCTGGCGCTAAAAGGCCTAGAGTTCTGATTCCATCACAGAGTACTGCCGCCGCCGCCGCCGCCTCCGCCTCTCACGCCTCCACCTCCAATGCCACCACTCCCCGGAGCTTCGAAACAAGTTCTAACCATCAAGGTAAATTTCTCTCCCTCTCTCTAATTGCTCCATTTTCATTTTCTTGTAATTCTTATCAAATTCAGAATCATCAGCAGCAACAATGAAGTGTTTGCTGACTCTCTCTCTCCAAATTTGGTTGTTTGTTTCTTAGTTCCAACATGATATTATTCATGTTTCAAAAAAAAAATGATATTATTCATGTTCTAATTTGCATTTGGATTCATAGCAAAACAATATGACTCTGTGAATGGTTTTTTATTTCAGTTCTGTGTTTTAAGATATTGAAACTTTACATATTTTGCTGAAGCAGCTGAACATGTTCATGTTTCTCTCTGTTTTCTCCTCTTCTTTTGCTCCTCTCTCCAACAAACAAAGGAAAAGATCTTTTATTAGAGAGAGAGGGAGAGGGGAGTGAGGAAATGTGTTGAATTTTATTGCTTCCATGGCTAAACAAACATATGCATATATCTTGGAATTTTGCAAAGATTTGCCTGTTCTGTTACTTGATTTTCTTCTGGAATTGTGATGACACTTTGACAACAGATGCAAGCTTCAAGAAGTCGTTACCGGGGCAAGTTCGAGCACCGGCCGTGTTCAGGTGCCATAGAGTGACAGCCATTAGCAGTGGGGAAGGTGAGTTAGCTTACCAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGCTTTCTCTATGATCAAGGAATTGATGACAAAAATGGCTTCCCATCTGTTTCACACCTCCATCTGGAAAGTGGTAACCACCACCACAAGGAATAG

mRNA sequence

ATGAACAGGACAATGTTGGGTCTCCGAGATGTTCTCTTTATAGCTCCCACGCCTTCTTCTCTCCATCAACAGACAACCCAAATCATTTCCTCCGATCACCACCCATCTCTTCCTCTCCCTTCCTCCGCCGCTCTCGGCGTCAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGTCTCCCTCAGCCGCCGCCGCCGCCGCCCCCGGCCGCCGAAGTTAGCGAGCGCAGGGGTGTGGACAATCTGAAGAGAACCCAGGATTTCGGATTCGGGAAAGGGGATTCGTTGATCGCCGGCGGGAATAATGCCCTCGACGAGCCGGTGAGAGGCGACGCCGGCGATTCCTCCATGGGCGTGTGTAGGGACTGCGGAAACAGAGCCAAAAAGGAGTGCGATTATCGGAGGTGCAGGACGTGTTGTAAAGGGCGTGGGAATCATTGCTCCACGCACGTCAAGAGCACGTGGGTGTCGGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTTGTGATGGACGGCGTCGCCACCGCTAGTGGCGACGGTGGGTCTTCTGGGTCTTCTTCCGCTGGCGCTAAAAGGCCTAGAGTTCTGATTCCATCACAGAGTACTGCCGCCGCCGCCGCCGCCTCCGCCTCTCACGCCTCCACCTCCAATGCCACCACTCCCCGGAGCTTCGAAACAAGTTCTAACCATCAAGATGCAAGCTTCAAGAAGTCGTTACCGGGGCAAGTTCGAGCACCGGCCGTGTTCAGGTGCCATAGAGTGACAGCCATTAGCAGTGGGGAAGGTGAGTTAGCTTACCAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGCTTTCTCTATGATCAAGGAATTGATGACAAAAATGGCTTCCCATCTGTTTCACACCTCCATCTGGAAAGTGGTAACCACCACCACAAGGAATAG

Coding sequence (CDS)

ATGAACAGGACAATGTTGGGTCTCCGAGATGTTCTCTTTATAGCTCCCACGCCTTCTTCTCTCCATCAACAGACAACCCAAATCATTTCCTCCGATCACCACCCATCTCTTCCTCTCCCTTCCTCCGCCGCTCTCGGCGTCAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGTCTCCCTCAGCCGCCGCCGCCGCCGCCCCCGGCCGCCGAAGTTAGCGAGCGCAGGGGTGTGGACAATCTGAAGAGAACCCAGGATTTCGGATTCGGGAAAGGGGATTCGTTGATCGCCGGCGGGAATAATGCCCTCGACGAGCCGGTGAGAGGCGACGCCGGCGATTCCTCCATGGGCGTGTGTAGGGACTGCGGAAACAGAGCCAAAAAGGAGTGCGATTATCGGAGGTGCAGGACGTGTTGTAAAGGGCGTGGGAATCATTGCTCCACGCACGTCAAGAGCACGTGGGTGTCGGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTTGTGATGGACGGCGTCGCCACCGCTAGTGGCGACGGTGGGTCTTCTGGGTCTTCTTCCGCTGGCGCTAAAAGGCCTAGAGTTCTGATTCCATCACAGAGTACTGCCGCCGCCGCCGCCGCCTCCGCCTCTCACGCCTCCACCTCCAATGCCACCACTCCCCGGAGCTTCGAAACAAGTTCTAACCATCAAGATGCAAGCTTCAAGAAGTCGTTACCGGGGCAAGTTCGAGCACCGGCCGTGTTCAGGTGCCATAGAGTGACAGCCATTAGCAGTGGGGAAGGTGAGTTAGCTTACCAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGCTTTCTCTATGATCAAGGAATTGATGACAAAAATGGCTTCCCATCTGTTTCACACCTCCATCTGGAAAGTGGTAACCACCACCACAAGGAATAG

Protein sequence

MNRTMLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQPPPPPPPAAEVSERRGVDNLKRTQDFGFGKGDSLIAGGNNALDEPVRGDAGDSSMGVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLHLESGNHHHKE

Homology

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BLAST of Moc09g35570 vs. NCBI nr
Match: XP_022138928.1 (protein LATERAL ROOT PRIMORDIUM 1 [Momordica charantia])

HSP 1 Score: 607.1 bits (1564), Expect = 8.7e-170
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0


Query: 1   MNRTMLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPC 60
           MNRTMLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPC
Sbjct: 1   MNRTMLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPC 60

Query: 61  LPQPPPPPPPAAEVSERRGVDNLKRTQDFGFGKGDSLIAGGNNALDEPVRGDAGDSSMGV 120
           LPQPPPPPPPAAEVSERRGVDNLKRTQDFGFGKGDSLIAGGNNALDEPVRGDAGDSSMGV
Sbjct: 61  LPQPPPPPPPAAEVSERRGVDNLKRTQDFGFGKGDSLIAGGNNALDEPVRGDAGDSSMGV 120

Query: 121 CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGD 180
           CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGD
Sbjct: 121 CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGD 180

Query: 181 GGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSL 240
           GGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSL
Sbjct: 181 GGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSL 240

Query: 241 PGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH 300
           PGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH
Sbjct: 241 PGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH 300

Query: 301 LESGNHHHKE 311
           LESGNHHHKE
Sbjct: 301 LESGNHHHKE 310

[Close]

BLAST of Moc09g35570 vs. NCBI nr
Match: XP_038892899.1 (protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida])

HSP 1 Score: 501.5 bits (1290), Expect = 5.1e-138
Identity = 266/306 (86.93%), Postives = 279/306 (91.18%), Query Frame = 0


Query: 5   MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQP 64
           MLGLRDVLFIAPTPSSLHQQ TQIISSDHHPSLPLPSSAALGVSVGIFPLL ATPCLP P
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQ-TQIISSDHHPSLPLPSSAALGVSVGIFPLLTATPCLPPP 60

Query: 65  PP-PPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-GNNALDEPVRGDAGDSSMGVC 124
            P P   A +V++R R ++NLKRTQDFGFGKGDSL+ G GNN  DE V+GDAGD SM VC
Sbjct: 61  QPLPNQTADDVTDRSRSLENLKRTQDFGFGKGDSLMGGAGNNVSDEQVKGDAGDGSMAVC 120

Query: 125 RDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDG 184
           RDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 185 GSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLP 244
           GSSGSSSAGAKRPRVLIPSQSTAAAAA     ASTSNATTPRSFET+S+HQDASFKKSLP
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSTAAAAA-----ASTSNATTPRSFETTSSHQDASFKKSLP 240

Query: 245 GQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLHL 304
           G VRAPAVFRCHRVTAI+SGEGELAYQATVNIGGHVFKGFLYDQG DDKN FPS+SHLHL
Sbjct: 241 GHVRAPAVFRCHRVTAINSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHL 300

Query: 305 ESGNHH 308
           +SGNHH
Sbjct: 301 DSGNHH 300

[Close]

BLAST of Moc09g35570 vs. NCBI nr
Match: XP_004142483.1 (protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN52321.1 hypothetical protein Csa_008495 [Cucumis sativus])

HSP 1 Score: 500.4 bits (1287), Expect = 1.1e-137
Identity = 268/309 (86.73%), Postives = 279/309 (90.29%), Query Frame = 0


Query: 5   MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP-- 64
           MLGLRDVLFIAPTPSSLHQQ TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLP  
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQ-TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPS 60

Query: 65  QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-GNNALDEPVRGDAGDSSMGV 124
           QPPP      +V++R R  DNLKRTQDFGFGKG+SLIAG GNN  DE V+GDAGD SM V
Sbjct: 61  QPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAV 120

Query: 125 CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGD 184
           CRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGD
Sbjct: 121 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGD 180

Query: 185 GGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSL 244
           GGSSGSSSAGAKRPRVLIPSQS AAAAA     ASTSNATTPRSFET+S+HQDASFKKSL
Sbjct: 181 GGSSGSSSAGAKRPRVLIPSQSAAAAAA-----ASTSNATTPRSFETTSSHQDASFKKSL 240

Query: 245 PGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH 304
           PG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG DDKN FPS+SHLH
Sbjct: 241 PGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLH 300

Query: 305 LESGNHHHK 310
           L+SGNHH +
Sbjct: 301 LDSGNHHRE 303

[Close]

BLAST of Moc09g35570 vs. NCBI nr
Match: XP_008446964.1 (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo])

HSP 1 Score: 498.8 bits (1283), Expect = 3.3e-137
Identity = 267/309 (86.41%), Postives = 278/309 (89.97%), Query Frame = 0


Query: 5   MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP-- 64
           MLGLRDVLFIAPTPSSLHQQ TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLP  
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQ-TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPS 60

Query: 65  QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-GNNALDEPVRGDAGDSSMGV 124
           QPPP      +V++R R  DNLKRTQDFGFGKG+SLI G GNN  DE V+GDAGD SM V
Sbjct: 61  QPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAV 120

Query: 125 CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGD 184
           CRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGD
Sbjct: 121 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGD 180

Query: 185 GGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSL 244
           GGSSGSSSAGAKRPRVLIPSQS AAAAA     ASTSNATTPRSFET+S+HQDASFKKSL
Sbjct: 181 GGSSGSSSAGAKRPRVLIPSQSAAAAAA-----ASTSNATTPRSFETTSSHQDASFKKSL 240

Query: 245 PGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH 304
           PG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG DDKN FPS+SHLH
Sbjct: 241 PGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLH 300

Query: 305 LESGNHHHK 310
           L+SGNHH +
Sbjct: 301 LDSGNHHRE 303

[Close]

BLAST of Moc09g35570 vs. NCBI nr
Match: KAA0034761.1 (protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa] >TYK09315.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa])

HSP 1 Score: 488.4 bits (1256), Expect = 4.5e-134
Identity = 267/325 (82.15%), Postives = 278/325 (85.54%), Query Frame = 0


Query: 5   MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP-- 64
           MLGLRDVLFIAPTPSSLHQQ TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLP  
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQ-TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPS 60

Query: 65  QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-GNNALDEPVRGDAGDSSMGV 124
           QPPP      +V++R R  DNLKRTQDFGFGKG+SLI G GNN  DE V+GDAGD SM V
Sbjct: 61  QPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAV 120

Query: 125 CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGD 184
           CRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGD
Sbjct: 121 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGD 180

Query: 185 GGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQ-------- 244
           GGSSGSSSAGAKRPRVLIPSQS AAAAA     ASTSNATTPRSFET+S+HQ        
Sbjct: 181 GGSSGSSSAGAKRPRVLIPSQSAAAAAA-----ASTSNATTPRSFETTSSHQDQFLNPPL 240

Query: 245 --------DASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD 304
                   DASFKKSLPG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD
Sbjct: 241 GILMTLKPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD 300

Query: 305 QGIDDKNGFPSVSHLHLESGNHHHK 310
           QG DDKN FPS+SHLHL+SGNHH +
Sbjct: 301 QGADDKNAFPSISHLHLDSGNHHRE 319

[Close]

BLAST of Moc09g35570 vs. ExPASy Swiss-Prot
Match: Q94CK9 (Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 7.4e-55
Identity = 147/310 (47.42%), Postives = 183/310 (59.03%), Query Frame = 0


Query: 5   MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQP 64
           M+GLRDV  +AP   + H Q   +IS   H +    ++AALG  VG+ PLL A    PQ 
Sbjct: 3   MVGLRDVFLVAP---AYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTAG--TPQQ 62

Query: 65  PPPPPPAAEVSERR---GVDNLKRTQDFGFGKGDSLIAG--GNNALDEPVRGDAGDSSMG 124
                    +   R     +N   TQ   F   +    G   NN+        +G S   
Sbjct: 63  NVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNS-----GSGSGASGTA 122

Query: 125 VCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASG 184
            C+DCGN+AKKEC  RRCRTCCK RG  CSTHVKSTWVSAARRRERQ++        A+ 
Sbjct: 123 TCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTGANP 182

Query: 185 DGGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQD-ASFKK 244
             GSS S+S+G K+PR++   Q     A    SH STSN T P+SFETSS+ QD    ++
Sbjct: 183 TAGSSLSTSSGTKKPRIVGSQQQQQQQA---TSHTSTSN-TPPQSFETSSSRQDGGGSRE 242

Query: 245 SLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSH 304
           + PGQVRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG++ K GFPS+S 
Sbjct: 243 AWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLEPKEGFPSMSD 291

Query: 305 LHLESGNHHH 309
           LHL    ++H
Sbjct: 303 LHLGGSANNH 291

[Close]

BLAST of Moc09g35570 vs. ExPASy Swiss-Prot
Match: Q9M2U4 (Protein SHI RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=SRS6 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 9.1e-29
Identity = 74/179 (41.34%), Postives = 100/179 (55.87%), Query Frame = 0


Query: 120 VCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASG 179
           VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+ ++  R                
Sbjct: 40  VCRDCGNRAKKECLFERCRTCCKSRGYNCVTHVKSTWIPSSATR---------------- 99

Query: 180 DGGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKS 239
                 SSS   ++ ++ I  QS+   +                   T+++ Q+  F++ 
Sbjct: 100 -----SSSSPSERKKKLKIDKQSSPNVSL----------------LPTTTSRQERGFREG 159

Query: 240 LPGQVRAPAVFRCHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVS 298
           LPG++ APAVF+  RVTAIS+ E  E+ YQATV I GH+FKGFL+  G+D    FP +S
Sbjct: 160 LPGKIEAPAVFKRTRVTAISNNEQAEIGYQATVTISGHIFKGFLHYYGVDHNKAFPCLS 181

[Close]

BLAST of Moc09g35570 vs. ExPASy Swiss-Prot
Match: O65517 (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-28
Identity = 83/190 (43.68%), Postives = 109/190 (57.37%), Query Frame = 0


Query: 121 CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGD 180
           CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+  ARRRERQ  + M    + SG 
Sbjct: 94  CRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHM----STSGG 153

Query: 181 GGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSL 240
           GG SGS  AG           S+        +   TS+++   S        +ASF    
Sbjct: 154 GGGSGSGGAGG--------GGSSIPKRHRDPTLPGTSSSSRLPSHSAGLEMGEASF---- 213

Query: 241 PGQVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHL 300
           PG+V + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG       P  S++
Sbjct: 214 PGEVSSDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQG-------PESSYM 260

Query: 301 HLESGNHHHK 310
              SG   H+
Sbjct: 274 SGGSGGSDHQ 260

[Close]

BLAST of Moc09g35570 vs. ExPASy Swiss-Prot
Match: Q9FXH7 (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.9e-27
Identity = 85/208 (40.87%), Postives = 108/208 (51.92%), Query Frame = 0


Query: 107 EPVRGDAGDSSMG-----VCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAAR 166
           EPVR   G  ++       C+DCGN+AKK+C + RCRTCCK RG  C THVKSTWVSAA+
Sbjct: 100 EPVRSSTGGFTVTRQGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAK 159

Query: 167 RRERQ-MLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNAT 226
           RRERQ  L V+        +    G      K           +A A     +AS+S   
Sbjct: 160 RRERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLE 219

Query: 227 TPRSFETSSNHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKG 286
           T                  LP ++ +PAVFRC RV++I   + E AYQ  V+IGGHVFKG
Sbjct: 220 T----------------SHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKG 279

Query: 287 FLYDQGIDDKNGFPSVSHLHLESGNHHH 309
            LYDQG    +   S S L+ E+ + HH
Sbjct: 280 ILYDQGPSSDHHRYS-SSLNGETSHQHH 290

[Close]

BLAST of Moc09g35570 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 123.6 bits (309), Expect = 3.8e-27
Identity = 77/183 (42.08%), Postives = 98/183 (53.55%), Query Frame = 0


Query: 111 GDAGDSSMGV-CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLV 170
           G +G  S GV C+DCGN+AKK+C + RCRTCCK RG  CSTHV+STWV AA+RRERQ  +
Sbjct: 133 GGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQL 192

Query: 171 VMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSS 230
                 T    G S        KR R  +P+ S++       SH+               
Sbjct: 193 ATVQPQTQLPRGESV------PKRHRENLPATSSSLVCTRIPSHSGLEVG---------- 252

Query: 231 NHQDASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDD 290
                    + P +V + AVFRC RV+++  GE E AYQ  V+IGGH+FKG LYD G   
Sbjct: 253 ---------NFPAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGS 290

Query: 291 KNG 293
             G
Sbjct: 313 SGG 290

[Close]

BLAST of Moc09g35570 vs. ExPASy TrEMBL
Match: A0A6J1CEG6 (protein LATERAL ROOT PRIMORDIUM 1 OS=Momordica charantia OX=3673 GN=LOC111009988 PE=3 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 4.2e-170
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0


Query: 1   MNRTMLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPC 60
           MNRTMLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPC
Sbjct: 1   MNRTMLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPC 60

Query: 61  LPQPPPPPPPAAEVSERRGVDNLKRTQDFGFGKGDSLIAGGNNALDEPVRGDAGDSSMGV 120
           LPQPPPPPPPAAEVSERRGVDNLKRTQDFGFGKGDSLIAGGNNALDEPVRGDAGDSSMGV
Sbjct: 61  LPQPPPPPPPAAEVSERRGVDNLKRTQDFGFGKGDSLIAGGNNALDEPVRGDAGDSSMGV 120

Query: 121 CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGD 180
           CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGD
Sbjct: 121 CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGD 180

Query: 181 GGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSL 240
           GGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSL
Sbjct: 181 GGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSL 240

Query: 241 PGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH 300
           PGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH
Sbjct: 241 PGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH 300

Query: 301 LESGNHHHKE 311
           LESGNHHHKE
Sbjct: 301 LESGNHHHKE 310

[Close]

BLAST of Moc09g35570 vs. ExPASy TrEMBL
Match: A0A0A0KWX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623840 PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 5.6e-138
Identity = 268/309 (86.73%), Postives = 279/309 (90.29%), Query Frame = 0


Query: 5   MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP-- 64
           MLGLRDVLFIAPTPSSLHQQ TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLP  
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQ-TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPS 60

Query: 65  QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-GNNALDEPVRGDAGDSSMGV 124
           QPPP      +V++R R  DNLKRTQDFGFGKG+SLIAG GNN  DE V+GDAGD SM V
Sbjct: 61  QPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAV 120

Query: 125 CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGD 184
           CRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGD
Sbjct: 121 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGD 180

Query: 185 GGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSL 244
           GGSSGSSSAGAKRPRVLIPSQS AAAAA     ASTSNATTPRSFET+S+HQDASFKKSL
Sbjct: 181 GGSSGSSSAGAKRPRVLIPSQSAAAAAA-----ASTSNATTPRSFETTSSHQDASFKKSL 240

Query: 245 PGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH 304
           PG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG DDKN FPS+SHLH
Sbjct: 241 PGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLH 300

Query: 305 LESGNHHHK 310
           L+SGNHH +
Sbjct: 301 LDSGNHHRE 303

[Close]

BLAST of Moc09g35570 vs. ExPASy TrEMBL
Match: A0A1S3BFS5 (protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo OX=3656 GN=LOC103489517 PE=3 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.6e-137
Identity = 267/309 (86.41%), Postives = 278/309 (89.97%), Query Frame = 0


Query: 5   MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP-- 64
           MLGLRDVLFIAPTPSSLHQQ TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLP  
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQ-TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPS 60

Query: 65  QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-GNNALDEPVRGDAGDSSMGV 124
           QPPP      +V++R R  DNLKRTQDFGFGKG+SLI G GNN  DE V+GDAGD SM V
Sbjct: 61  QPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAV 120

Query: 125 CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGD 184
           CRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGD
Sbjct: 121 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGD 180

Query: 185 GGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSL 244
           GGSSGSSSAGAKRPRVLIPSQS AAAAA     ASTSNATTPRSFET+S+HQDASFKKSL
Sbjct: 181 GGSSGSSSAGAKRPRVLIPSQSAAAAAA-----ASTSNATTPRSFETTSSHQDASFKKSL 240

Query: 245 PGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH 304
           PG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG DDKN FPS+SHLH
Sbjct: 241 PGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLH 300

Query: 305 LESGNHHHK 310
           L+SGNHH +
Sbjct: 301 LDSGNHHRE 303

[Close]

BLAST of Moc09g35570 vs. ExPASy TrEMBL
Match: A0A5D3CCT8 (Protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G003120 PE=3 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 2.2e-134
Identity = 267/325 (82.15%), Postives = 278/325 (85.54%), Query Frame = 0


Query: 5   MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP-- 64
           MLGLRDVLFIAPTPSSLHQQ TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLP  
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQ-TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPS 60

Query: 65  QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-GNNALDEPVRGDAGDSSMGV 124
           QPPP      +V++R R  DNLKRTQDFGFGKG+SLI G GNN  DE V+GDAGD SM V
Sbjct: 61  QPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAV 120

Query: 125 CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGD 184
           CRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGD
Sbjct: 121 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGD 180

Query: 185 GGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQ-------- 244
           GGSSGSSSAGAKRPRVLIPSQS AAAAA     ASTSNATTPRSFET+S+HQ        
Sbjct: 181 GGSSGSSSAGAKRPRVLIPSQSAAAAAA-----ASTSNATTPRSFETTSSHQDQFLNPPL 240

Query: 245 --------DASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD 304
                   DASFKKSLPG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD
Sbjct: 241 GILMTLKPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD 300

Query: 305 QGIDDKNGFPSVSHLHLESGNHHHK 310
           QG DDKN FPS+SHLHL+SGNHH +
Sbjct: 301 QGADDKNAFPSISHLHLDSGNHHRE 319

[Close]

BLAST of Moc09g35570 vs. ExPASy TrEMBL
Match: A0A6J1GXY1 (protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita moschata OX=3662 GN=LOC111458506 PE=3 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 1.4e-128
Identity = 250/303 (82.51%), Postives = 266/303 (87.79%), Query Frame = 0


Query: 5   MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQP 64
           MLGLRDVLFIAPTPSSLHQ  TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCL QP
Sbjct: 1   MLGLRDVLFIAPTPSSLHQH-TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL-QP 60

Query: 65  PPPPPPAAEVSERRGVDNLKRTQDFGFGKGDSLI-AGGNNALDEPVRGDAGDSSMGVCRD 124
           PP   P       R ++NLKRTQDFGFGKGDSLI  GGN+  D+ V+GD GD S+GVCRD
Sbjct: 61  PPNQMPDELSDRSRSLENLKRTQDFGFGKGDSLIGGGGNHGYDDQVKGDGGDGSLGVCRD 120

Query: 125 CGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDGGS 184
           CGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV A+RRRERQMLVVMDGVAT+    GS
Sbjct: 121 CGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATS----GS 180

Query: 185 SGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSLPGQ 244
           SGSSSAGAKRP+VLIPSQ+TAAAAA     ASTSNATTPRSFET+S+HQDASFKKSLPGQ
Sbjct: 181 SGSSSAGAKRPKVLIPSQTTAAAAA-----ASTSNATTPRSFETTSSHQDASFKKSLPGQ 240

Query: 245 VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLHLES 304
           V+APAVF+CHRVTAISSGEGEL YQATVNIGGHVFKGFLYDQG D KN  PS+SHLHLES
Sbjct: 241 VQAPAVFKCHRVTAISSGEGELTYQATVNIGGHVFKGFLYDQGADVKNALPSISHLHLES 292

Query: 305 GNH 307
           GNH
Sbjct: 301 GNH 292

[Close]

BLAST of Moc09g35570 vs. TAIR 10
Match: AT5G12330.2 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 215.7 bits (548), Expect = 5.3e-56
Identity = 147/310 (47.42%), Postives = 183/310 (59.03%), Query Frame = 0


Query: 5   MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQP 64
           M+GLRDV  +AP   + H Q   +IS   H +    ++AALG  VG+ PLL A    PQ 
Sbjct: 3   MVGLRDVFLVAP---AYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTAG--TPQQ 62

Query: 65  PPPPPPAAEVSERR---GVDNLKRTQDFGFGKGDSLIAG--GNNALDEPVRGDAGDSSMG 124
                    +   R     +N   TQ   F   +    G   NN+        +G S   
Sbjct: 63  NVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNS-----GSGSGASGTA 122

Query: 125 VCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASG 184
            C+DCGN+AKKEC  RRCRTCCK RG  CSTHVKSTWVSAARRRERQ++        A+ 
Sbjct: 123 TCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTGANP 182

Query: 185 DGGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQD-ASFKK 244
             GSS S+S+G K+PR++   Q     A    SH STSN T P+SFETSS+ QD    ++
Sbjct: 183 TAGSSLSTSSGTKKPRIVGSQQQQQQQA---TSHTSTSN-TPPQSFETSSSRQDGGGSRE 242

Query: 245 SLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSH 304
           + PGQVRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG++ K GFPS+S 
Sbjct: 243 AWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLEPKEGFPSMSD 291

Query: 305 LHLESGNHHH 309
           LHL    ++H
Sbjct: 303 LHLGGSANNH 291

[Close]

BLAST of Moc09g35570 vs. TAIR 10
Match: AT5G12330.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 215.7 bits (548), Expect = 5.3e-56
Identity = 147/310 (47.42%), Postives = 183/310 (59.03%), Query Frame = 0


Query: 5   MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQP 64
           M+GLRDV  +AP   + H Q   +IS   H +    ++AALG  VG+ PLL A    PQ 
Sbjct: 3   MVGLRDVFLVAP---AYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTAG--TPQQ 62

Query: 65  PPPPPPAAEVSERR---GVDNLKRTQDFGFGKGDSLIAG--GNNALDEPVRGDAGDSSMG 124
                    +   R     +N   TQ   F   +    G   NN+        +G S   
Sbjct: 63  NVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNS-----GSGSGASGTA 122

Query: 125 VCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASG 184
            C+DCGN+AKKEC  RRCRTCCK RG  CSTHVKSTWVSAARRRERQ++        A+ 
Sbjct: 123 TCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTGANP 182

Query: 185 DGGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQD-ASFKK 244
             GSS S+S+G K+PR++   Q     A    SH STSN T P+SFETSS+ QD    ++
Sbjct: 183 TAGSSLSTSSGTKKPRIVGSQQQQQQQA---TSHTSTSN-TPPQSFETSSSRQDGGGSRE 242

Query: 245 SLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSH 304
           + PGQVRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG++ K GFPS+S 
Sbjct: 243 AWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLEPKEGFPSMSD 291

Query: 305 LHLESGNHHH 309
           LHL    ++H
Sbjct: 303 LHLGGSANNH 291

[Close]

BLAST of Moc09g35570 vs. TAIR 10
Match: AT5G12330.4 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 215.7 bits (548), Expect = 5.3e-56
Identity = 147/310 (47.42%), Postives = 183/310 (59.03%), Query Frame = 0


Query: 5   MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQP 64
           M+GLRDV  +AP   + H Q   +IS   H +    ++AALG  VG+ PLL A    PQ 
Sbjct: 90  MVGLRDVFLVAP---AYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTAG--TPQQ 149

Query: 65  PPPPPPAAEVSERR---GVDNLKRTQDFGFGKGDSLIAG--GNNALDEPVRGDAGDSSMG 124
                    +   R     +N   TQ   F   +    G   NN+        +G S   
Sbjct: 150 NVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNS-----GSGSGASGTA 209

Query: 125 VCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASG 184
            C+DCGN+AKKEC  RRCRTCCK RG  CSTHVKSTWVSAARRRERQ++        A+ 
Sbjct: 210 TCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTGANP 269

Query: 185 DGGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQD-ASFKK 244
             GSS S+S+G K+PR++   Q     A    SH STSN T P+SFETSS+ QD    ++
Sbjct: 270 TAGSSLSTSSGTKKPRIVGSQQQQQQQA---TSHTSTSN-TPPQSFETSSSRQDGGGSRE 329

Query: 245 SLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSH 304
           + PGQVRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG++ K GFPS+S 
Sbjct: 330 AWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLEPKEGFPSMSD 378

Query: 305 LHLESGNHHH 309
           LHL    ++H
Sbjct: 390 LHLGGSANNH 378

[Close]

BLAST of Moc09g35570 vs. TAIR 10
Match: AT4G36260.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 128.6 bits (322), Expect = 8.5e-30
Identity = 83/190 (43.68%), Postives = 109/190 (57.37%), Query Frame = 0


Query: 121 CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGD 180
           CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+  ARRRERQ  + M    + SG 
Sbjct: 94  CRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHM----STSGG 153

Query: 181 GGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSL 240
           GG SGS  AG           S+        +   TS+++   S        +ASF    
Sbjct: 154 GGGSGSGGAGG--------GGSSIPKRHRDPTLPGTSSSSRLPSHSAGLEMGEASF---- 213

Query: 241 PGQVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHL 300
           PG+V + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG       P  S++
Sbjct: 214 PGEVSSDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQG-------PESSYM 260

Query: 301 HLESGNHHHK 310
              SG   H+
Sbjct: 274 SGGSGGSDHQ 260

[Close]

BLAST of Moc09g35570 vs. TAIR 10
Match: AT5G12330.3 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 126.3 bits (316), Expect = 4.2e-29
Identity = 105/241 (43.57%), Postives = 130/241 (53.94%), Query Frame = 0


Query: 5   MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPQP 64
           M+GLRDV  +AP   + H Q   +IS   H +    ++AALG  VG+ PLL A    PQ 
Sbjct: 3   MVGLRDVFLVAP---AYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTAG--TPQQ 62

Query: 65  PPPPPPAAEVSERR---GVDNLKRTQDFGFGKGDSLIAG--GNNALDEPVRGDAGDSSMG 124
                    +   R     +N   TQ   F   +    G   NN+        +G S   
Sbjct: 63  NVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNS-----GSGSGASGTA 122

Query: 125 VCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASG 184
            C+DCGN+AKKEC  RRCRTCCK RG  CSTHVKSTWVSAARRRERQ++        A+ 
Sbjct: 123 TCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTGANP 182

Query: 185 DGGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKS 241
             GSS S+S+G K+PR++   Q     A    SH STSN T P+SFETSS+ Q  SF  S
Sbjct: 183 TAGSSLSTSSGTKKPRIVGSQQQQQQQA---TSHTSTSN-TPPQSFETSSSRQ-GSFTFS 221

The following BLAST results are available for this feature:

BLAST of Moc09g35570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138928.1	8.7e-170	100.00	protein LATERAL ROOT PRIMORDIUM 1 [Momordica charantia]	[more]
XP_038892899.1	5.1e-138	86.93	protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida]	[more]
XP_004142483.1	1.1e-137	86.73	protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN52321.1 hypothetical pro...	[more]
XP_008446964.1	3.3e-137	86.41	PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo]	[more]
KAA0034761.1	4.5e-134	82.15	protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa] >TYK09315.1 protein...	[more]

BLAST of Moc09g35570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94CK9	7.4e-55	47.42	Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 S...	[more]
Q9M2U4	9.1e-29	41.34	Protein SHI RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=SRS6 PE=1 SV=1	[more]
O65517	1.2e-28	43.68	Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1	[more]
Q9FXH7	2.9e-27	40.87	Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1	[more]
Q9SD40	3.8e-27	42.08	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]

BLAST of Moc09g35570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CEG6	4.2e-170	100.00	protein LATERAL ROOT PRIMORDIUM 1 OS=Momordica charantia OX=3673 GN=LOC111009988...	[more]
A0A0A0KWX6	5.6e-138	86.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623840 PE=3 SV=1	[more]
A0A1S3BFS5	1.6e-137	86.41	protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo OX=3656 GN=LOC103489517 PE=3 S...	[more]
A0A5D3CCT8	2.2e-134	82.15	Protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1GXY1	1.4e-128	82.51	protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of Moc09g35570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12330.2	5.3e-56	47.42	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.1	5.3e-56	47.42	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.4	5.3e-56	47.42	Lateral root primordium (LRP) protein-related	[more]
AT4G36260.1	8.5e-30	43.68	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.3	4.2e-29	43.57	Lateral root primordium (LRP) protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 120..162 e-value: 1.2E-23 score: 80.7
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 240..287 e-value: 8.0E-27 score: 90.9
None	No IPR available	PFAM	PF05142	DUF702	coord: 120..288 e-value: 6.9E-56 score: 188.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..237
None	No IPR available	PANTHER	PTHR31604:SF28	PROTEIN SHI RELATED SEQUENCE 6	coord: 5..302
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 5..302

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g35570.1	Moc09g35570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding