Moc09g34610 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g34610
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	RNA-binding (RRM/RBD/RNP motifs) family protein
Location	chr9: 26489566 .. 26491955 (+)
RNA-Seq Expression	Moc09g34610
Synteny	Moc09g34610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAACAATAGTAACAATGCAGGTTTAATGTTCGGCGACACCACGCTCACGAAGGTGTTCGTCGGCGGATTGGCGTGGGAGACTCCCAAGGAAGCTATGCGAGATCACTTCGAGAAGTTCGGCGAGATCTTGGAGGCTGTAATCATCTCCGATAAGCTCACCGGCAGATCCAAGGGCTACGGATTCGTAAGTCGTCTCTCGAGATTAGATTATTAATTCCTCCATCGCCGCCGCCGGATTGGATTCCGATGGTGATTGATTTTTGTTTTTTTGTTTTTACTTGAATTAGGTCACGTTTAAGGACGCGGAATCGGCGAAGAAGGCTTGCGAGGACGCCGCGCCGATCATCAACGGCCGCCGAGCCAACTGTAATCTGGCGTCGCTCGGAGCTCGCCGCGGCTCTCGCTCCGCATCGGCTGCTACTCCTCCCCAAGCTCCTCCGCTACCAGGTAACTGCTCAATTCAATTCACTCCACAATGGCATTTTCGTAATTTCAGTTTCATAGAGTGATCTACGAGTAATTTTTGTTTAAGGATTTGAAGTGTGATTTAGTAATGGGAAACTTTGGGACGGTGGAGATCTAAAGTTGTTGTTGTGATGTAAAATTTGAAGGATCCAACGGCGGTGGGGGGGCGAGGTCCACGTCAGCAGCATCGCCCAACCACGTGCAGTGGTACTACCCGGCCGGGACTCCTCCGACGCCGTTTCATCATCAGCCTCATCAGCCCGTCCCGTTCTACGGGTATGCCTTCTCATTACATACTTTTATTTTATTTTATTATTATTTTTTGAGTGCTTGTAATGTAAATAAACGTAAATTTCGTTTTCTTCTAGTTACTCCCCAAGCCCCACCTACATCGCCACGGATATCAGTTACAACCATGTAAGAATTAAATTGATCTTTTTTGAAAATTCTTATTTAAATTTAAATTACTGGATTTATTGTAAAAATAAAGTTGTTGGTGGGCTAAATGGCGACGTTTTTGTTGACAGAAGCTGAGCTATATGAACGGCGGGGGGCATTACTCGCAGGTGTATCCGGGGCAGGCTATGGTGGGAGCGAACACATTGATGCCGATGTACCCGCTGTATCACTACCATCAATCACACGCCATGGGGATGCCGGCCCACATATTCCCGCCAAGCCCGACGGCGGCCGGCCCATTCGCCGCCGTCCCACCCACATCCATCATGTCCAAACCGGCCTCGGTTGGTCCAAATCCAGGTCCGTTCATTTTTTTGAGAAAATACTTGATTTCTTATTAATATTTGACGATACAAAAAATAAATTTTTTTGTTTTTTATTTCTTTTTCTTAGATGTAAGATATTTAATGATTATAACGAGTGAGTTGCTCCTTACTGATATAGAATCGAGTATTTTTTCGATAGAGAAACGAATGAGGTAAAGAGTCAAACGTTGTAAACTAGGGAAAAAGAATAGGCAATGCAACAAACAGATCGTGAGAGAGAGAGAGAGAGAGGAGCTTCACGTGAAATGGTGATTTGGTAAAGGCCACCCTGTGTCCCACGTGGCCATCTGGTCCGCCCATTCTGCCATGGTCAATTGGTGTCGCTTTCCCAATTATTAATATTCCGCTAATCTTAAGCACTGTTTTGCAAAAAACAACTTATTCTACTTCATTTCTAGATCTTGTATTGTCATGTGTATAAAAAACTTAACAGCAACTTATTCTGTTTTAGTTTTTCTCTTTGAAAATTAAGCTTAGGGACTCTACTTCGACCCATGAACTATAAAAAATAGAGCTTCCAAAGTGACGAATCATTTGTCGTTGAAAGATAAACTGCATCGTTAAAATTGATTAGTGACGAAAGATCTTTCGTCGAATCCAACATTACTTAAAGCTTGTTGTTAAAGTTCTCCAACTATGAAACACGACTTTCGTTGCATATATTGCGATGCAAATAGCATGCTTCGCATTCGCTAATTTTGCCGCATATCATATGGTGAAAGTTTTTATCTTGTTATCAAGTTTAAGTCAGATTTTAGGAACTAACCGAAGTAGCTATCCAAAACTTGCTTTTGTCTTTAAATTTTGGCTAAGAATTCAAGTATATTTCGAACAAAGATGCAAAACATATTAAAGAAGTAGTGGGAAAACTAACATAATTGTTAAAAACATAAAACAAAATATATTTAGAAACGATTTAATTCAACCCGAGTAGGAAATGAGATATTTATCTTGCAATGTCATTAATATCATTGTCTTTCTCACTGAACATTGACAGTTGCTTGTTGGGTAGGTGTGTTATGAACTTAAATTCCAGCTGATTTATATTTGTGATGATAATTAAACTGATATTACAAAGAACAGTTTGCTTGGTTGTGGAATAATAGGTACAGTTGGAGGAGGATGCAGAGGATGA

mRNA sequence

ATGAGCAACAATAGTAACAATGCAGGTTTAATGTTCGGCGACACCACGCTCACGAAGGTGTTCGTCGGCGGATTGGCGTGGGAGACTCCCAAGGAAGCTATGCGAGATCACTTCGAGAAGTTCGGCGAGATCTTGGAGGCTGTAATCATCTCCGATAAGCTCACCGGCAGATCCAAGGGCTACGGATTCGTCACGTTTAAGGACGCGGAATCGGCGAAGAAGGCTTGCGAGGACGCCGCGCCGATCATCAACGGCCGCCGAGCCAACTGTAATCTGGCGTCGCTCGGAGCTCGCCGCGGCTCTCGCTCCGCATCGGCTGCTACTCCTCCCCAAGCTCCTCCGCTACCAGGATCCAACGGCGGTGGGGGGGCGAGGTCCACGTCAGCAGCATCGCCCAACCACGTGCAGTGGTACTACCCGGCCGGGACTCCTCCGACGCCGTTTCATCATCAGCCTCATCAGCCCGTCCCGTTCTACGGTTACTCCCCAAGCCCCACCTACATCGCCACGGATATCAGTTACAACCATAAGCTGAGCTATATGAACGGCGGGGGGCATTACTCGCAGGTGTATCCGGGGCAGGCTATGGTGGGAGCGAACACATTGATGCCGATGTACCCGCTGTATCACTACCATCAATCACACGCCATGGGGATGCCGGCCCACATATTCCCGCCAAGCCCGACGGCGGCCGGCCCATTCGCCGCCGTCCCACCCACATCCATCATGTCCAAACCGGCCTCGGTTGGTCCAAATCCAGGTACAGTTGGAGGAGGATGCAGAGGATGA

Coding sequence (CDS)

ATGAGCAACAATAGTAACAATGCAGGTTTAATGTTCGGCGACACCACGCTCACGAAGGTGTTCGTCGGCGGATTGGCGTGGGAGACTCCCAAGGAAGCTATGCGAGATCACTTCGAGAAGTTCGGCGAGATCTTGGAGGCTGTAATCATCTCCGATAAGCTCACCGGCAGATCCAAGGGCTACGGATTCGTCACGTTTAAGGACGCGGAATCGGCGAAGAAGGCTTGCGAGGACGCCGCGCCGATCATCAACGGCCGCCGAGCCAACTGTAATCTGGCGTCGCTCGGAGCTCGCCGCGGCTCTCGCTCCGCATCGGCTGCTACTCCTCCCCAAGCTCCTCCGCTACCAGGATCCAACGGCGGTGGGGGGGCGAGGTCCACGTCAGCAGCATCGCCCAACCACGTGCAGTGGTACTACCCGGCCGGGACTCCTCCGACGCCGTTTCATCATCAGCCTCATCAGCCCGTCCCGTTCTACGGTTACTCCCCAAGCCCCACCTACATCGCCACGGATATCAGTTACAACCATAAGCTGAGCTATATGAACGGCGGGGGGCATTACTCGCAGGTGTATCCGGGGCAGGCTATGGTGGGAGCGAACACATTGATGCCGATGTACCCGCTGTATCACTACCATCAATCACACGCCATGGGGATGCCGGCCCACATATTCCCGCCAAGCCCGACGGCGGCCGGCCCATTCGCCGCCGTCCCACCCACATCCATCATGTCCAAACCGGCCTCGGTTGGTCCAAATCCAGGTACAGTTGGAGGAGGATGCAGAGGATGA

Protein sequence

MSNNSNNAGLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNGGGGARSTSAASPNHVQWYYPAGTPPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLSYMNGGGHYSQVYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPGTVGGGCRG

Homology

[Close]

BLAST of Moc09g34610 vs. NCBI nr
Match: XP_022139299.1 (probable RNA-binding protein ARP1 [Momordica charantia])

HSP 1 Score: 514.2 bits (1323), Expect = 6.5e-142
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MSNNSNNAGLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKG 60
           MSNNSNNAGLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKG
Sbjct: 1   MSNNSNNAGLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKG 60

Query: 61  YGFVTFKDAESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNG 120
           YGFVTFKDAESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNG
Sbjct: 61  YGFVTFKDAESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNG 120

Query: 121 GGGARSTSAASPNHVQWYYPAGTPPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLSY 180
           GGGARSTSAASPNHVQWYYPAGTPPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLSY
Sbjct: 121 GGGARSTSAASPNHVQWYYPAGTPPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLSY 180

Query: 181 MNGGGHYSQVYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTAAGPFAAVPPT 240
           MNGGGHYSQVYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTAAGPFAAVPPT
Sbjct: 181 MNGGGHYSQVYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTAAGPFAAVPPT 240

Query: 241 SIMSKPASVGPNP 254
           SIMSKPASVGPNP
Sbjct: 241 SIMSKPASVGPNP 253

[Close]

BLAST of Moc09g34610 vs. NCBI nr
Match: XP_038891949.1 (probable RNA-binding protein ARP1 isoform X1 [Benincasa hispida])

HSP 1 Score: 461.8 bits (1187), Expect = 3.8e-126
Identity = 232/262 (88.55%), Postives = 246/262 (93.89%), Query Frame = 0


Query: 2   SNNSNNAGLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGY 61
           ++N+NNAGL FGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGY
Sbjct: 9   NSNNNNAGL-FGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGY 68

Query: 62  GFVTFKDAESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNGG 121
           GFVTFKDAESAKKACED+APIINGRRANCNLASLGARRG   +++ATPPQAP  PGSNGG
Sbjct: 69  GFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQ-PGSNGG 128

Query: 122 GGARSTSAASP-NHVQWYYPAGTPPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLSY 181
           G   +++ A+P NHVQWYYPAGT PTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKL Y
Sbjct: 129 GPRTTSATATPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY 188

Query: 182 MNGGGHYSQVYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTAAGPFAAVPPT 241
           MN  GHY+Q+YPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT AGPFAAVPP+
Sbjct: 189 MN--GHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPS 248

Query: 242 SIMSKPASVGPNPGTVGGGCRG 263
           SIMSKPASVGPNPGTVGGGCRG
Sbjct: 249 SIMSKPASVGPNPGTVGGGCRG 266

[Close]

BLAST of Moc09g34610 vs. NCBI nr
Match: XP_004143608.1 (probable RNA-binding protein ARP1 isoform X1 [Cucumis sativus])

HSP 1 Score: 446.0 bits (1146), Expect = 2.2e-121
Identity = 225/258 (87.21%), Postives = 238/258 (92.25%), Query Frame = 0


Query: 2   SNNSNNAGLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGY 61
           +N+S NAGL FGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGY
Sbjct: 11  NNSSTNAGL-FGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGY 70

Query: 62  GFVTFKDAESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNGG 121
           GFVTFKDAESAKKACED+APIINGRRANCNLASLGARRG   +++ATPPQAP  PGSN G
Sbjct: 71  GFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQ-PGSNAG 130

Query: 122 GGARSTSAASP-NHVQWYYPAGTPPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLSY 181
           G   +++A +P NHVQWYYPAGT PTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKL Y
Sbjct: 131 GPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY 190

Query: 182 MNGGGHYSQVYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTAAGPFAAVPPT 241
           MN  GHY+Q+YPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT AGPFAAVPPT
Sbjct: 191 MN--GHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPT 250

Query: 242 SIMSKPASVGPNPGTVGG 259
           SIMSKP +VGPNPGTVGG
Sbjct: 251 SIMSKPTTVGPNPGTVGG 264

[Close]

BLAST of Moc09g34610 vs. NCBI nr
Match: XP_038891950.1 (probable RNA-binding protein ARP1 isoform X2 [Benincasa hispida])

HSP 1 Score: 443.4 bits (1139), Expect = 1.4e-120
Identity = 223/253 (88.14%), Postives = 237/253 (93.68%), Query Frame = 0


Query: 2   SNNSNNAGLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGY 61
           ++N+NNAGL FGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGY
Sbjct: 9   NSNNNNAGL-FGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGY 68

Query: 62  GFVTFKDAESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNGG 121
           GFVTFKDAESAKKACED+APIINGRRANCNLASLGARRG   +++ATPPQAP  PGSNGG
Sbjct: 69  GFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQ-PGSNGG 128

Query: 122 GGARSTSAASP-NHVQWYYPAGTPPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLSY 181
           G   +++ A+P NHVQWYYPAGT PTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKL Y
Sbjct: 129 GPRTTSATATPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY 188

Query: 182 MNGGGHYSQVYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTAAGPFAAVPPT 241
           MN  GHY+Q+YPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT AGPFAAVPP+
Sbjct: 189 MN--GHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPS 248

Query: 242 SIMSKPASVGPNP 254
           SIMSKPASVGPNP
Sbjct: 249 SIMSKPASVGPNP 257

[Close]

BLAST of Moc09g34610 vs. NCBI nr
Match: XP_008445852.2 (PREDICTED: probable RNA-binding protein ARP1 isoform X1 [Cucumis melo])

HSP 1 Score: 443.4 bits (1139), Expect = 1.4e-120
Identity = 225/259 (86.87%), Postives = 240/259 (92.66%), Query Frame = 0


Query: 2   SNNSNNAGLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGY 61
           +N++ NAGL FGDTTLTKVFVGGLAWETPKEAMRDHF+KFGEILEAVIISDKLTGRSKGY
Sbjct: 8   TNSNTNAGL-FGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDKLTGRSKGY 67

Query: 62  GFVTFKDAESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNGG 121
           GFVTFKDAESAKKACED+APIINGRRANCNLASLGARRG   +++ATPPQAP  PGSNGG
Sbjct: 68  GFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQ-PGSNGG 127

Query: 122 GGARSTSAASP-NHVQWYYPAGTPPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLSY 181
           G   +T+A +P NHVQWYYPAGT PTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKL Y
Sbjct: 128 GPRTTTAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY 187

Query: 182 MNGGGHYSQVYPGQ-AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTAAGPFAAVPP 241
           +N  GHY+Q+YPGQ AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT AGPFAAVPP
Sbjct: 188 VN--GHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPP 247

Query: 242 TSIMSKPASVGPNPGTVGG 259
           TSIMSKP +VGPNPGTVGG
Sbjct: 248 TSIMSKPTTVGPNPGTVGG 262

[Close]

BLAST of Moc09g34610 vs. ExPASy Swiss-Prot
Match: Q9M1S3 (Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.7e-55
Identity = 138/278 (49.64%), Postives = 165/278 (59.35%), Query Frame = 0


Query: 5   SNNAGLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFV 64
           SNN    FGDT LTKVFVGGLAW+T KEAM DHF K+G+ILEAVIISDKLT RSKGYGFV
Sbjct: 4   SNNVNGCFGDTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGYGFV 63

Query: 65  TFKDAESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNGGGGA 124
           TFKDA++A +ACED+ PIINGRRANCNLASLG R   R +   T PQ  P  G+      
Sbjct: 64  TFKDAKAATRACEDSTPIINGRRANCNLASLGGR--LRKSPTMTSPQQGPKNGN------ 123

Query: 125 RSTSAASPNHVQWYYPAGTPPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLSYMNG- 184
           R+T     NH QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N K+ Y+ G 
Sbjct: 124 RATPPHVGNHSQWYYPSGFTNQQHQQQNHQAVPFYGY-PS-AYVAPNMTFNQKVGYVGGT 183

Query: 185 --GGHYSQVYP------------------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAH 244
              G+Y+Q+ P                  G+ MVG A+ ++P Y +Y YHQS A+G P  
Sbjct: 184 YMNGYYAQMQPQPQSQPQPQYYHHHMYGGGRVMVGAASPMVPFYTVYPYHQSQAIGFPQP 243

Query: 245 IFPPSPTAAGPFAAVPPTSIMSKPASVGPNP--GTVGG 259
            F                   SKP S    P  GTVGG
Sbjct: 244 SF-------------------SKPLSFSTPPISGTVGG 252

[Close]

BLAST of Moc09g34610 vs. ExPASy Swiss-Prot
Match: Q76LC6 (RNA-binding protein 24 OS=Danio rerio OX=7955 GN=rbm24 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.4e-22
Identity = 50/85 (58.82%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 14 DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAK 73
          DTT TK+FVGGL + T   ++R +FE FGEI EAV+I+D+ TG+S+GYGFVT  D  +A 
Sbjct: 7  DTTYTKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAAD 66

Query: 74 KACEDAAPIINGRRANCNLASLGAR 99
          +AC+D  PII+GR+AN NLA LGA+
Sbjct: 67 RACKDPNPIIDGRKANVNLAYLGAK 91

[Close]

BLAST of Moc09g34610 vs. ExPASy Swiss-Prot
Match: Q9BX46 (RNA-binding protein 24 OS=Homo sapiens OX=9606 GN=RBM24 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.4e-22
Identity = 50/85 (58.82%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 14 DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAK 73
          DTT TK+FVGGL + T   ++R +FE FGEI EAV+I+D+ TG+S+GYGFVT  D  +A+
Sbjct: 7  DTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 74 KACEDAAPIINGRRANCNLASLGAR 99
          +AC+D  PII+GR+AN NLA LGA+
Sbjct: 67 RACKDPNPIIDGRKANVNLAYLGAK 91

[Close]

BLAST of Moc09g34610 vs. ExPASy Swiss-Prot
Match: Q5ZJX4 (RNA-binding protein 38 OS=Gallus gallus OX=9031 GN=RBM38 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.1e-22
Identity = 49/85 (57.65%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 14 DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAK 73
          DTT TK+FVGGL + T   ++R +FE FG+I EAV+I+D+ TG+S+GYGFVT  D  +A+
Sbjct: 7  DTTFTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 74 KACEDAAPIINGRRANCNLASLGAR 99
          +AC+D  PII+GR+AN NLA LGA+
Sbjct: 67 RACKDPNPIIDGRKANVNLAYLGAK 91

[Close]

BLAST of Moc09g34610 vs. ExPASy Swiss-Prot
Match: Q6GQD3 (RNA-binding protein 24-A OS=Xenopus laevis OX=8355 GN=rbm24-a PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.1e-22
Identity = 49/85 (57.65%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 14 DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAK 73
          DTT TK+FVGGL + T   ++R +FE FG+I EAV+I+D+ TG+S+GYGFVT  D  +A+
Sbjct: 7  DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 74 KACEDAAPIINGRRANCNLASLGAR 99
          +AC+D  PII+GR+AN NLA LGA+
Sbjct: 67 RACKDPNPIIDGRKANVNLAYLGAK 91

[Close]

BLAST of Moc09g34610 vs. ExPASy TrEMBL
Match: A0A6J1CCJ5 (probable RNA-binding protein ARP1 OS=Momordica charantia OX=3673 GN=LOC111010248 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 3.1e-142
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MSNNSNNAGLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKG 60
           MSNNSNNAGLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKG
Sbjct: 1   MSNNSNNAGLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKG 60

Query: 61  YGFVTFKDAESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNG 120
           YGFVTFKDAESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNG
Sbjct: 61  YGFVTFKDAESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNG 120

Query: 121 GGGARSTSAASPNHVQWYYPAGTPPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLSY 180
           GGGARSTSAASPNHVQWYYPAGTPPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLSY
Sbjct: 121 GGGARSTSAASPNHVQWYYPAGTPPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLSY 180

Query: 181 MNGGGHYSQVYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTAAGPFAAVPPT 240
           MNGGGHYSQVYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTAAGPFAAVPPT
Sbjct: 181 MNGGGHYSQVYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTAAGPFAAVPPT 240

Query: 241 SIMSKPASVGPNP 254
           SIMSKPASVGPNP
Sbjct: 241 SIMSKPASVGPNP 253

[Close]

BLAST of Moc09g34610 vs. ExPASy TrEMBL
Match: A0A0A0KNL6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175910 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 1.1e-121
Identity = 225/258 (87.21%), Postives = 238/258 (92.25%), Query Frame = 0


Query: 2   SNNSNNAGLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGY 61
           +N+S NAGL FGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGY
Sbjct: 11  NNSSTNAGL-FGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGY 70

Query: 62  GFVTFKDAESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNGG 121
           GFVTFKDAESAKKACED+APIINGRRANCNLASLGARRG   +++ATPPQAP  PGSN G
Sbjct: 71  GFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQ-PGSNAG 130

Query: 122 GGARSTSAASP-NHVQWYYPAGTPPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLSY 181
           G   +++A +P NHVQWYYPAGT PTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKL Y
Sbjct: 131 GPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY 190

Query: 182 MNGGGHYSQVYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTAAGPFAAVPPT 241
           MN  GHY+Q+YPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT AGPFAAVPPT
Sbjct: 191 MN--GHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPT 250

Query: 242 SIMSKPASVGPNPGTVGG 259
           SIMSKP +VGPNPGTVGG
Sbjct: 251 SIMSKPTTVGPNPGTVGG 264

[Close]

BLAST of Moc09g34610 vs. ExPASy TrEMBL
Match: A0A1S3BEI0 (probable RNA-binding protein ARP1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488745 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.8e-121
Identity = 225/259 (86.87%), Postives = 240/259 (92.66%), Query Frame = 0


Query: 2   SNNSNNAGLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGY 61
           +N++ NAGL FGDTTLTKVFVGGLAWETPKEAMRDHF+KFGEILEAVIISDKLTGRSKGY
Sbjct: 8   TNSNTNAGL-FGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDKLTGRSKGY 67

Query: 62  GFVTFKDAESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNGG 121
           GFVTFKDAESAKKACED+APIINGRRANCNLASLGARRG   +++ATPPQAP  PGSNGG
Sbjct: 68  GFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQ-PGSNGG 127

Query: 122 GGARSTSAASP-NHVQWYYPAGTPPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLSY 181
           G   +T+A +P NHVQWYYPAGT PTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKL Y
Sbjct: 128 GPRTTTAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY 187

Query: 182 MNGGGHYSQVYPGQ-AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTAAGPFAAVPP 241
           +N  GHY+Q+YPGQ AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT AGPFAAVPP
Sbjct: 188 VN--GHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPP 247

Query: 242 TSIMSKPASVGPNPGTVGG 259
           TSIMSKP +VGPNPGTVGG
Sbjct: 248 TSIMSKPTTVGPNPGTVGG 262

[Close]

BLAST of Moc09g34610 vs. ExPASy TrEMBL
Match: A0A5A7SY01 (Putative RNA-binding protein ARP1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00350 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 3.2e-118
Identity = 220/255 (86.27%), Postives = 235/255 (92.16%), Query Frame = 0


Query: 2   SNNSNNAGLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGY 61
           +N++ NAGL FGDTTLTKVFVGGLAWETPKEAMRDHF+KFGEILEAVIISDKLTGRSKGY
Sbjct: 8   TNSNTNAGL-FGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDKLTGRSKGY 67

Query: 62  GFVTFKDAESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNGG 121
           GFVTFKDAESAKKACED+APIINGRRANCNLASLGARRG   +++ATPPQAP  PGSNGG
Sbjct: 68  GFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQ-PGSNGG 127

Query: 122 GGARSTSAASP-NHVQWYYPAGTPPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLSY 181
           G   +T+A +P NHVQWYYPAGT PTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKL Y
Sbjct: 128 GPRTTTAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY 187

Query: 182 MNGGGHYSQVYPGQ-AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTAAGPFAAVPP 241
           +N  GHY+Q+YPGQ AMVG NTLMPMYPLYHYHQSHAMGMPAHIFPPSPT AGPFAAVPP
Sbjct: 188 VN--GHYTQMYPGQAAMVGVNTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPP 247

Query: 242 TSIMSKPASVGPNPG 255
           TSIMSKP +VGPNPG
Sbjct: 248 TSIMSKPTTVGPNPG 258

[Close]

BLAST of Moc09g34610 vs. ExPASy TrEMBL
Match: A0A1S3BD62 (probable RNA-binding protein ARP1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488745 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 4.1e-118
Identity = 220/254 (86.61%), Postives = 235/254 (92.52%), Query Frame = 0


Query: 2   SNNSNNAGLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGY 61
           +N++ NAGL FGDTTLTKVFVGGLAWETPKEAMRDHF+KFGEILEAVIISDKLTGRSKGY
Sbjct: 8   TNSNTNAGL-FGDTTLTKVFVGGLAWETPKEAMRDHFQKFGEILEAVIISDKLTGRSKGY 67

Query: 62  GFVTFKDAESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNGG 121
           GFVTFKDAESAKKACED+APIINGRRANCNLASLGARRG   +++ATPPQAP  PGSNGG
Sbjct: 68  GFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQ-PGSNGG 127

Query: 122 GGARSTSAASP-NHVQWYYPAGTPPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLSY 181
           G   +T+A +P NHVQWYYPAGT PTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKL Y
Sbjct: 128 GPRTTTAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY 187

Query: 182 MNGGGHYSQVYPGQ-AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTAAGPFAAVPP 241
           +N  GHY+Q+YPGQ AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT AGPFAAVPP
Sbjct: 188 VN--GHYTQMYPGQAAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPP 247

Query: 242 TSIMSKPASVGPNP 254
           TSIMSKP +VGPNP
Sbjct: 248 TSIMSKPTTVGPNP 257

[Close]

BLAST of Moc09g34610 vs. TAIR 10
Match: AT3G54770.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 216.5 bits (550), Expect = 2.6e-56
Identity = 138/278 (49.64%), Postives = 165/278 (59.35%), Query Frame = 0


Query: 5   SNNAGLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFV 64
           SNN    FGDT LTKVFVGGLAW+T KEAM DHF K+G+ILEAVIISDKLT RSKGYGFV
Sbjct: 4   SNNVNGCFGDTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGYGFV 63

Query: 65  TFKDAESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNGGGGA 124
           TFKDA++A +ACED+ PIINGRRANCNLASLG R   R +   T PQ  P  G+      
Sbjct: 64  TFKDAKAATRACEDSTPIINGRRANCNLASLGGR--LRKSPTMTSPQQGPKNGN------ 123

Query: 125 RSTSAASPNHVQWYYPAGTPPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLSYMNG- 184
           R+T     NH QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N K+ Y+ G 
Sbjct: 124 RATPPHVGNHSQWYYPSGFTNQQHQQQNHQAVPFYGY-PS-AYVAPNMTFNQKVGYVGGT 183

Query: 185 --GGHYSQVYP------------------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAH 244
              G+Y+Q+ P                  G+ MVG A+ ++P Y +Y YHQS A+G P  
Sbjct: 184 YMNGYYAQMQPQPQSQPQPQYYHHHMYGGGRVMVGAASPMVPFYTVYPYHQSQAIGFPQP 243

Query: 245 IFPPSPTAAGPFAAVPPTSIMSKPASVGPNP--GTVGG 259
            F                   SKP S    P  GTVGG
Sbjct: 244 SF-------------------SKPLSFSTPPISGTVGG 252

[Close]

BLAST of Moc09g34610 vs. TAIR 10
Match: AT3G54770.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-42
Identity = 112/249 (44.98%), Postives = 138/249 (55.42%), Query Frame = 0


Query: 34  MRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDAAPIINGRRANCNLA 93
           M DHF K+G+ILEAVIISDKLT RSKGYGFVTFKDA++A +ACED+ PIINGRRANCNLA
Sbjct: 1   MYDHFIKYGDILEAVIISDKLTRRSKGYGFVTFKDAKAATRACEDSTPIINGRRANCNLA 60

Query: 94  SLGARRGSRSASAATPPQAPPLPGSNGGGGARSTSAASPNHVQWYYPAGTPPTPFHHQPH 153
           SLG R   ++ + ATPP                      NH QWYYP+G        Q H
Sbjct: 61  SLGGRLRPKNGNRATPPHV-------------------GNHSQWYYPSGFTNQQHQQQNH 120

Query: 154 QPVPFYGYSPSPTYIATDISYNHKLSYMNG---GGHYSQVYP------------------ 213
           Q VPFYGY PS  Y+A ++++N K+ Y+ G    G+Y+Q+ P                  
Sbjct: 121 QAVPFYGY-PS-AYVAPNMTFNQKVGYVGGTYMNGYYAQMQPQPQSQPQPQYYHHHMYGG 180

Query: 214 GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGP 259
           G+ MVG A+ ++P Y +Y YHQS A+G P   F                   SKP S   
Sbjct: 181 GRVMVGAASPMVPFYTVYPYHQSQAIGFPQPSF-------------------SKPLSFST 209

[Close]

BLAST of Moc09g34610 vs. TAIR 10
Match: AT1G22910.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 159.5 bits (402), Expect = 3.8e-39
Identity = 110/246 (44.72%), Postives = 137/246 (55.69%), Query Frame = 0


Query: 9   GLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKD 68
           G+  GDTT TKVFVGGLAWET KE M+ HFE+FGEILEAV+I+DK +GRSKGYGFVTF++
Sbjct: 4   GIGLGDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFRE 63

Query: 69  AESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNGGGGARSTS 128
           AE+A+ AC DA P+I+GRRANCNLASLG +R        + P  P    ++GGGG  +  
Sbjct: 64  AEAARSACVDATPVIDGRRANCNLASLGLQR--------SKPSTP----NHGGGGRINNM 123

Query: 129 AASPNHVQWYYPAGTPPTP--FHHQPHQPVPFYGYSP-SPTYIATDISYNHKLSYMNG-- 188
               + +Q  +    PP P  F H PH P+  +GYSP SP Y     S+   L  M G  
Sbjct: 124 RVMMSTMQTGFGPPPPPQPPTFTHYPHLPLNLFGYSPYSPDY----SSFPTNLYGMYGCT 183

Query: 189 -GGHYSQVY------PGQAMVGANTLMPMY---------------PLYHYHQSHAMGMPA 228
            GG Y  VY       G     A +  P Y               P YH+  S+    P 
Sbjct: 184 SGGQYG-VYGNRNSGGGGLTAAAASATPFYPCGGGHGGVQFSQPQPFYHHLSSY---NPH 229

[Close]

BLAST of Moc09g34610 vs. TAIR 10
Match: AT1G22910.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 159.5 bits (402), Expect = 3.8e-39
Identity = 110/246 (44.72%), Postives = 137/246 (55.69%), Query Frame = 0


Query: 9   GLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKD 68
           G+  GDTT TKVFVGGLAWET KE M+ HFE+FGEILEAV+I+DK +GRSKGYGFVTF++
Sbjct: 4   GIGLGDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFRE 63

Query: 69  AESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNGGGGARSTS 128
           AE+A+ AC DA P+I+GRRANCNLASLG +R        + P  P    ++GGGG  +  
Sbjct: 64  AEAARSACVDATPVIDGRRANCNLASLGLQR--------SKPSTP----NHGGGGRINNM 123

Query: 129 AASPNHVQWYYPAGTPPTP--FHHQPHQPVPFYGYSP-SPTYIATDISYNHKLSYMNG-- 188
               + +Q  +    PP P  F H PH P+  +GYSP SP Y     S+   L  M G  
Sbjct: 124 RVMMSTMQTGFGPPPPPQPPTFTHYPHLPLNLFGYSPYSPDY----SSFPTNLYGMYGCT 183

Query: 189 -GGHYSQVY------PGQAMVGANTLMPMY---------------PLYHYHQSHAMGMPA 228
            GG Y  VY       G     A +  P Y               P YH+  S+    P 
Sbjct: 184 SGGQYG-VYGNRNSGGGGLTAAAASATPFYPCGGGHGGVQFSQPQPFYHHLSSY---NPH 229

[Close]

BLAST of Moc09g34610 vs. TAIR 10
Match: AT1G22910.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 157.1 bits (396), Expect = 1.9e-38
Identity = 113/255 (44.31%), Postives = 140/255 (54.90%), Query Frame = 0


Query: 9   GLMFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKD 68
           G+  GDTT TKVFVGGLAWET KE M+ HFE+FGEILEAV+I+DK +GRSKGYGFVTF++
Sbjct: 4   GIGLGDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFRE 63

Query: 69  AESAKKACEDAAPIINGRRANCNLASLGARRGSRSASAATPPQAPPLPGSNGGGGARSTS 128
           AE+A+ AC DA P+I+GRRANCNLASLG +R        + P  P    ++GGGG  +  
Sbjct: 64  AEAARSACVDATPVIDGRRANCNLASLGLQR--------SKPSTP----NHGGGGRINNM 123

Query: 129 AASPNHVQWYYPAGTPPTP--FHHQPHQPVPFYGYSP-SPTYIATDISYNHKLSYMNG-- 188
               + +Q  +    PP P  F H PH P+  +GYSP SP Y     S+   L  M G  
Sbjct: 124 RVMMSTMQTGFGPPPPPQPPTFTHYPHLPLNLFGYSPYSPDY----SSFPTNLYGMYGCT 183

Query: 189 -GGHYSQVY------PGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTAAGPFAA 248
            GG Y  VY       G     A +  P YP    H       P   F    ++  P   
Sbjct: 184 SGGQYG-VYGNRNSGGGGLTAAAASATPFYPCGGGHGGVQFSQP-QPFYHHLSSYNPHHY 240

Query: 249 VPPTSIMSKPASVGP 252
            PPT  M +   V P
Sbjct: 244 SPPTFSMQQVCFVVP 240

The following BLAST results are available for this feature:

BLAST of Moc09g34610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139299.1	6.5e-142	100.00	probable RNA-binding protein ARP1 [Momordica charantia]	[more]
XP_038891949.1	3.8e-126	88.55	probable RNA-binding protein ARP1 isoform X1 [Benincasa hispida]	[more]
XP_004143608.1	2.2e-121	87.21	probable RNA-binding protein ARP1 isoform X1 [Cucumis sativus]	[more]
XP_038891950.1	1.4e-120	88.14	probable RNA-binding protein ARP1 isoform X2 [Benincasa hispida]	[more]
XP_008445852.2	1.4e-120	86.87	PREDICTED: probable RNA-binding protein ARP1 isoform X1 [Cucumis melo]	[more]

BLAST of Moc09g34610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1S3	3.7e-55	49.64	Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 S...	[more]
Q76LC6	2.4e-22	58.82	RNA-binding protein 24 OS=Danio rerio OX=7955 GN=rbm24 PE=2 SV=1	[more]
Q9BX46	2.4e-22	58.82	RNA-binding protein 24 OS=Homo sapiens OX=9606 GN=RBM24 PE=1 SV=1	[more]
Q5ZJX4	3.1e-22	57.65	RNA-binding protein 38 OS=Gallus gallus OX=9031 GN=RBM38 PE=2 SV=1	[more]
Q6GQD3	4.1e-22	57.65	RNA-binding protein 24-A OS=Xenopus laevis OX=8355 GN=rbm24-a PE=2 SV=1	[more]

BLAST of Moc09g34610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CCJ5	3.1e-142	100.00	probable RNA-binding protein ARP1 OS=Momordica charantia OX=3673 GN=LOC111010248...	[more]
A0A0A0KNL6	1.1e-121	87.21	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175910 PE=4 SV...	[more]
A0A1S3BEI0	6.8e-121	86.87	probable RNA-binding protein ARP1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A5A7SY01	3.2e-118	86.27	Putative RNA-binding protein ARP1 isoform X1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3BD62	4.1e-118	86.61	probable RNA-binding protein ARP1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]

BLAST of Moc09g34610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54770.1	2.6e-56	49.64	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G54770.2	1.3e-42	44.98	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22910.1	3.8e-39	44.72	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22910.3	3.8e-39	44.72	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22910.2	1.9e-38	44.31	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 19..91 e-value: 1.1E-23 score: 94.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 20..77 e-value: 6.6E-18 score: 64.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 18..95 score: 17.233515
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 13..99 e-value: 1.9E-24 score: 87.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..130
None	No IPR available	PANTHER	PTHR48024:SF23	RNA-BINDING PROTEIN ARP1-RELATED	coord: 6..253
None	No IPR available	PANTHER	PTHR48024	GEO13361P1-RELATED	coord: 6..253
None	No IPR available	CDD	cd12384	RRM_RBM24_RBM38_like	coord: 18..93 e-value: 2.63501E-42 score: 137.361
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 16..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g34610.1	Moc09g34610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding