Moc09g34400 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g34400
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein RDM16 isoform X2
Location	chr9: 26304685 .. 26307445 (+)
RNA-Seq Expression	Moc09g34400
Synteny	Moc09g34400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAAAGAATTGGCCGAGAAGTTGAAGAAAATTCCCCTGGTATGTTTGAAAGCAACGTTCCTTTGACCCATTTTAGCTATTTTCACCACCCTCTGATGTTTGTTTTACATATATATGTATTCACATATGTTTGTGAGTGTGTATTGGGTATTTCTCTGTGTATCAAGTGTGTATTTGATCTTATAGATGAAGAAAGATGGGGGTTCAAGTTCTGCAAGCAGCTCAGTTGTAAAGTTGGAGGACAAATCTAAACCAGCAGGTGGTGTGTTGGGGCCATCGCCAACTACAAATATTGGCACAACTATTTCTGCTGGGGTAGCATCAAGTTCATCGACCTTACCTGCTGCTACTAATACACATGGCGGTGGTATTAATGTTCCAGCAGGCCTTACCTCTATACCCCATTTTGAAGCTGTCAAACGTGCACAGGAGCTTGCTGCTAGGATGGGATTTCGGCAGGATCCAGAGTTTGCTCCTCTCATAAATTTGTTTCCAGGGAATATAGCAACTGATGTTGCTGTTCCGCAGAAGCCAGTCAAGGCCCCTGTCCTTCGTCTTGATGCACTTGGCAGGGAAATAGATGAACAAGGAAATGTGGTCAATATAACCAAACCAAGCAACCTTAGCACTCTAAAGGTTTGAAATGAACTTATACTCCTTTAAATTTTTATTTTATTTTATTAAATTTTAATGGATTAACCGTGTATGTATTTTTAACTTTGCAGGTTAACATTAACAAACAGAAAAAGGATGCATTTCAGATTCTTAAACCTGAACTTGAGGTGGATCCAGAATCAAACCCTCATTTTGATGAGAGGATGGGTATAAATAAAACTAAACTCTTGAGGCCGAAGAGGATGAATTTCCAATTTGTTGAGGAAGGGAAATGGTCTAAGGAGGCTGAAACCATAAAATTAAGGGTACTTATAGTTTCAATCAAACTTTCTTTTTGTAAAAGAAGGGCTGTCTAATTTATTTTAATTTTCTCATTACAGAGTAAGTTCGGAGAGGCACAAGCCAAAGAGCGAAGGGAGAAGCAGGCACAATTGGCCAAGGCAAAGGCAGCACCTGATATAAACCCGAATTTGATCGAGGTATCAGAGAGAGTTATTGTGAAAGAAAAAACGAAAGAACCAATTCCTGAAATTGAGTGGTGGTAGGTTTTATATCTTTTCTATTCTTATACTTCTGAGTACTTGTTTAGTTTGCCACTTTTGGATCGTGAAAGCAATGGTATGATTGAACGATTTGAACATATTGACTTGGTGAATGCAAAACTTATATTAGATTTTTATCTTAGAAACTTTAGGAACTCAATTAAATTTACATCTTCTCGTTAGGAGGAATACAATATCTTACCCCATCATCAAAAGCCCGAATAGCAACTACATTTGATAACATTTACCGACGACAACCTAAATTCTTTTTAGTACACCAAGAGGCCGCAGAATATTTGATGATCTCTGCTCTTTCCTCCAACTTAGATGTTTATTCTTAATAATCCTGAGACTTCTTAAGTTAAATCCTATAAAGTTTTTCTTAGTAAAAAAAAAAATCCTATAAAGTTGCTTTGACCCCATGTTCCATAATATTTTAGCACTTTGTCGTTGATCTTTTTTTAATTGGAGTGGTTTGTGTGTGTGTGGAAATTTGTTTTCAAGTACGAAGTTCGAATGTCTTTTTCTTTTATCATTTATGTGCCCGTTTGGTACTAGGTTTGCATAGTAGTGGCATGTCTGGGGTAGAATGCCTGAAATTAAGATGTTTGGGAACAAAGTATTTCTGTGCTTTGGTATTATGACGTAATGAAGTGTTGGATCTGACTGGGATCTCGTCTGAGTTCAATGCTAATATTCTATTATTTTCTTTTTAACTATTTAGGGATGTCTCTCTTTTGCATTCTGGCACGTACGATGATGTGGGAGATGGTTTTGTGGCCAATGATAAAATAAGGAAGGATAAGATTACTATATATGTGGAGCATCCTCGTCCTATTGAACCTCCTGTTGAGCCAGCTCCTCCACCTCCTCAGCCCCTAAAGCTAACAAAGAAGGAGCAGAAGAAACTCCGGACGCAGCGCCGTCTAGCAAAGGAGAAAGATAGGCAGGAGATGATTAGACAAGGCCTGATAGAACCACCCAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCGGAAGCAACACAAGATCCTACTAAACTAGAGAAAGAGATTCGTGCTGCAGCTGCCGAGAGGGAACAGGCTCACATAGATAGAAACATTGCACGTAAACTTACTCCTGCAGAGCGCCGTGAGAAGAAAGAACGAAAGCTTTTTGACGATGCAAATTCACTGGAGAACTTTGTGTCTGTTTATAAGATCTACGACTTATCGCACCCACAGGCCCGGTTTAAAGTCGATGTTAATGCTAGAGAGAACCGGTTGACTGGATGTGCTGTGATATGTGATGGCATCAGTGTTCTGGTAGTTGAAGGGGGAAGCAAGTCCATCAAGAGGTATGGAAAGCTTATGCTTAGGCGTATAAATTGGGCTGCTTCTGTGAAAGAGGAGGAAGAGGCGGATGAAAGTGACGATAAGCCCGTTAACAAATGTTCACTGGTATGGCAAGGAAGTGTTGCCAAATCTAGTTTCAATAAATTTTTTATCCAGGAGTGCATGACAGAGGCAGCTGCTAGGAAGATTTTTGCCGATGCTGGTGTCGGTCATTATTGGGATCTCGCTGTGAACTTTTCCGACGATCAAATATAA

mRNA sequence

ATGCAGAAAGAATTGGCCGAGAAGTTGAAGAAAATTCCCCTGATGAAGAAAGATGGGGGTTCAAGTTCTGCAAGCAGCTCAGTTGTAAAGTTGGAGGACAAATCTAAACCAGCAGGTGGTGTGTTGGGGCCATCGCCAACTACAAATATTGGCACAACTATTTCTGCTGGGGTAGCATCAAGTTCATCGACCTTACCTGCTGCTACTAATACACATGGCGGTGGTATTAATGTTCCAGCAGGCCTTACCTCTATACCCCATTTTGAAGCTGTCAAACGTGCACAGGAGCTTGCTGCTAGGATGGGATTTCGGCAGGATCCAGAGTTTGCTCCTCTCATAAATTTGTTTCCAGGGAATATAGCAACTGATGTTGCTGTTCCGCAGAAGCCAGTCAAGGCCCCTGTCCTTCGTCTTGATGCACTTGGCAGGGAAATAGATGAACAAGGAAATGTGGTCAATATAACCAAACCAAGCAACCTTAGCACTCTAAAGGTTAACATTAACAAACAGAAAAAGGATGCATTTCAGATTCTTAAACCTGAACTTGAGGTGGATCCAGAATCAAACCCTCATTTTGATGAGAGGATGGGTATAAATAAAACTAAACTCTTGAGGCCGAAGAGGATGAATTTCCAATTTGTTGAGGAAGGGAAATGGTCTAAGGAGGCTGAAACCATAAAATTAAGGAGTAAGTTCGGAGAGGCACAAGCCAAAGAGCGAAGGGAGAAGCAGGCACAATTGGCCAAGGCAAAGGCAGCACCTGATATAAACCCGAATTTGATCGAGGTATCAGAGAGAGTTATTGTGAAAGAAAAAACGAAAGAACCAATTCCTGAAATTGAGTGGTGGGATGTCTCTCTTTTGCATTCTGGCACGTACGATGATGTGGGAGATGGTTTTGTGGCCAATGATAAAATAAGGAAGGATAAGATTACTATATATGTGGAGCATCCTCGTCCTATTGAACCTCCTGTTGAGCCAGCTCCTCCACCTCCTCAGCCCCTAAAGCTAACAAAGAAGGAGCAGAAGAAACTCCGGACGCAGCGCCGTCTAGCAAAGGAGAAAGATAGGCAGGAGATGATTAGACAAGGCCTGATAGAACCACCCAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCGGAAGCAACACAAGATCCTACTAAACTAGAGAAAGAGATTCGTGCTGCAGCTGCCGAGAGGGAACAGGCTCACATAGATAGAAACATTGCACGTAAACTTACTCCTGCAGAGCGCCGTGAGAAGAAAGAACGAAAGCTTTTTGACGATGCAAATTCACTGGAGAACTTTGTGTCTGTTTATAAGATCTACGACTTATCGCACCCACAGGCCCGGTTTAAAGTCGATGTTAATGCTAGAGAGAACCGGTTGACTGGATGTGCTGTGATATGTGATGGCATCAGTGTTCTGGTAGTTGAAGGGGGAAGCAAGTCCATCAAGAGGTATGGAAAGCTTATGCTTAGGCGTATAAATTGGGCTGCTTCTGTGAAAGAGGAGGAAGAGGCGGATGAAAGTGACGATAAGCCCGTTAACAAATGTTCACTGGTATGGCAAGGAAGTGTTGCCAAATCTAGTTTCAATAAATTTTTTATCCAGGAGTGCATGACAGAGGCAGCTGCTAGGAAGATTTTTGCCGATGCTGGTGTCGGTCATTATTGGGATCTCGCTGTGAACTTTTCCGACGATCAAATATAA

Coding sequence (CDS)

ATGCAGAAAGAATTGGCCGAGAAGTTGAAGAAAATTCCCCTGATGAAGAAAGATGGGGGTTCAAGTTCTGCAAGCAGCTCAGTTGTAAAGTTGGAGGACAAATCTAAACCAGCAGGTGGTGTGTTGGGGCCATCGCCAACTACAAATATTGGCACAACTATTTCTGCTGGGGTAGCATCAAGTTCATCGACCTTACCTGCTGCTACTAATACACATGGCGGTGGTATTAATGTTCCAGCAGGCCTTACCTCTATACCCCATTTTGAAGCTGTCAAACGTGCACAGGAGCTTGCTGCTAGGATGGGATTTCGGCAGGATCCAGAGTTTGCTCCTCTCATAAATTTGTTTCCAGGGAATATAGCAACTGATGTTGCTGTTCCGCAGAAGCCAGTCAAGGCCCCTGTCCTTCGTCTTGATGCACTTGGCAGGGAAATAGATGAACAAGGAAATGTGGTCAATATAACCAAACCAAGCAACCTTAGCACTCTAAAGGTTAACATTAACAAACAGAAAAAGGATGCATTTCAGATTCTTAAACCTGAACTTGAGGTGGATCCAGAATCAAACCCTCATTTTGATGAGAGGATGGGTATAAATAAAACTAAACTCTTGAGGCCGAAGAGGATGAATTTCCAATTTGTTGAGGAAGGGAAATGGTCTAAGGAGGCTGAAACCATAAAATTAAGGAGTAAGTTCGGAGAGGCACAAGCCAAAGAGCGAAGGGAGAAGCAGGCACAATTGGCCAAGGCAAAGGCAGCACCTGATATAAACCCGAATTTGATCGAGGTATCAGAGAGAGTTATTGTGAAAGAAAAAACGAAAGAACCAATTCCTGAAATTGAGTGGTGGGATGTCTCTCTTTTGCATTCTGGCACGTACGATGATGTGGGAGATGGTTTTGTGGCCAATGATAAAATAAGGAAGGATAAGATTACTATATATGTGGAGCATCCTCGTCCTATTGAACCTCCTGTTGAGCCAGCTCCTCCACCTCCTCAGCCCCTAAAGCTAACAAAGAAGGAGCAGAAGAAACTCCGGACGCAGCGCCGTCTAGCAAAGGAGAAAGATAGGCAGGAGATGATTAGACAAGGCCTGATAGAACCACCCAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCGGAAGCAACACAAGATCCTACTAAACTAGAGAAAGAGATTCGTGCTGCAGCTGCCGAGAGGGAACAGGCTCACATAGATAGAAACATTGCACGTAAACTTACTCCTGCAGAGCGCCGTGAGAAGAAAGAACGAAAGCTTTTTGACGATGCAAATTCACTGGAGAACTTTGTGTCTGTTTATAAGATCTACGACTTATCGCACCCACAGGCCCGGTTTAAAGTCGATGTTAATGCTAGAGAGAACCGGTTGACTGGATGTGCTGTGATATGTGATGGCATCAGTGTTCTGGTAGTTGAAGGGGGAAGCAAGTCCATCAAGAGGTATGGAAAGCTTATGCTTAGGCGTATAAATTGGGCTGCTTCTGTGAAAGAGGAGGAAGAGGCGGATGAAAGTGACGATAAGCCCGTTAACAAATGTTCACTGGTATGGCAAGGAAGTGTTGCCAAATCTAGTTTCAATAAATTTTTTATCCAGGAGTGCATGACAGAGGCAGCTGCTAGGAAGATTTTTGCCGATGCTGGTGTCGGTCATTATTGGGATCTCGCTGTGAACTTTTCCGACGATCAAATATAA

Protein sequence

MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI

Homology

[Close]

BLAST of Moc09g34400 vs. NCBI nr
Match: XP_022139034.1 (protein RDM16 isoform X5 [Momordica charantia])

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 574/574 (100.00%), Postives = 574/574 (100.00%), Query Frame = 0


Query: 1   MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 60
           MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS
Sbjct: 1   MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 60

Query: 61  SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 120
           SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI
Sbjct: 61  SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 120

Query: 121 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 121 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180

Query: 181 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 240
           ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER
Sbjct: 181 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 240

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 300
           REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF
Sbjct: 241 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 300

Query: 301 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360
           VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 301 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360

Query: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 420
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 420

Query: 421 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480
           ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 421 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480

Query: 481 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 540
           VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF
Sbjct: 481 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 540

Query: 541 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 575
           IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 541 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 574

[Close]

BLAST of Moc09g34400 vs. NCBI nr
Match: XP_022139032.1 (protein RDM16 isoform X3 [Momordica charantia])

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 574/574 (100.00%), Postives = 574/574 (100.00%), Query Frame = 0


Query: 1   MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 60
           MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS
Sbjct: 67  MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 126

Query: 61  SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 120
           SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI
Sbjct: 127 SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 186

Query: 121 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 187 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 246

Query: 181 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 240
           ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER
Sbjct: 247 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 306

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 300
           REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF
Sbjct: 307 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 366

Query: 301 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360
           VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 367 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 426

Query: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 420
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 427 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 486

Query: 421 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480
           ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 487 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 546

Query: 481 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 540
           VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF
Sbjct: 547 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 606

Query: 541 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 575
           IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 607 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 640

[Close]

BLAST of Moc09g34400 vs. NCBI nr
Match: XP_022139031.1 (protein RDM16 isoform X2 [Momordica charantia])

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 574/574 (100.00%), Postives = 574/574 (100.00%), Query Frame = 0


Query: 1   MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 60
           MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS
Sbjct: 354 MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 413

Query: 61  SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 120
           SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI
Sbjct: 414 SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 473

Query: 121 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 474 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 533

Query: 181 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 240
           ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER
Sbjct: 534 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 593

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 300
           REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF
Sbjct: 594 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 653

Query: 301 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360
           VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 654 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 713

Query: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 420
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 714 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 773

Query: 421 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480
           ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 774 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 833

Query: 481 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 540
           VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF
Sbjct: 834 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 893

Query: 541 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 575
           IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 894 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 927

[Close]

BLAST of Moc09g34400 vs. NCBI nr
Match: XP_022139030.1 (protein RDM16 isoform X1 [Momordica charantia])

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 574/574 (100.00%), Postives = 574/574 (100.00%), Query Frame = 0


Query: 1   MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 60
           MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS
Sbjct: 360 MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 419

Query: 61  SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 120
           SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI
Sbjct: 420 SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 479

Query: 121 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 480 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 539

Query: 181 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 240
           ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER
Sbjct: 540 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 599

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 300
           REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF
Sbjct: 600 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 659

Query: 301 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360
           VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 660 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 719

Query: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 420
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 720 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 779

Query: 421 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480
           ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 780 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 839

Query: 481 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 540
           VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF
Sbjct: 840 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 899

Query: 541 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 575
           IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 900 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 933

[Close]

BLAST of Moc09g34400 vs. NCBI nr
Match: XP_022139033.1 (protein RDM16 isoform X4 [Momordica charantia])

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 574/574 (100.00%), Postives = 574/574 (100.00%), Query Frame = 0


Query: 1   MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 60
           MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS
Sbjct: 57  MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 116

Query: 61  SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 120
           SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI
Sbjct: 117 SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 176

Query: 121 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 177 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 236

Query: 181 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 240
           ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER
Sbjct: 237 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 296

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 300
           REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF
Sbjct: 297 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 356

Query: 301 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360
           VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 357 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 416

Query: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 420
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 417 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 476

Query: 421 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480
           ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 477 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 536

Query: 481 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 540
           VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF
Sbjct: 537 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 596

Query: 541 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 575
           IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 597 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 630

[Close]

BLAST of Moc09g34400 vs. ExPASy Swiss-Prot
Match: Q9C7E7 (Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1)

HSP 1 Score: 695.7 bits (1794), Expect = 4.5e-199
Identity = 375/573 (65.45%), Postives = 449/573 (78.36%), Query Frame = 0


Query: 1   MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 60
           +QK LA++LK +PL+KK    +S  S   ++            PS TT     +S G  S
Sbjct: 240 LQKGLADRLKNLPLLKKATKPTSEGSPHTRVP-----------PSTTT---PAVSTG-TS 299

Query: 61  SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 120
            +STLP     H G     AG  SI + EAVKRAQELAA MGF QD EFAP+INLFPG  
Sbjct: 300 FASTLP-----HTG----LAGFGSIANIEAVKRAQELAANMGFHQDREFAPVINLFPGQA 359

Query: 121 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
            +D+ V Q+P K PVLR+DALGREIDE GNV+++TKPSNLSTLKVNINK+KKDAFQILKP
Sbjct: 360 PSDMTVAQRPEKPPVLRVDALGREIDEHGNVISVTKPSNLSTLKVNINKKKKDAFQILKP 419

Query: 181 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 240
           +LE D + NP+FD RMGI++ K+LRPKRM+FQFVEEGKW+++AE +K +S FGEA+AKE 
Sbjct: 420 QLEADLKENPYFDTRMGIDEKKILRPKRMSFQFVEEGKWTRDAENLKFKSHFGEAKAKEL 479

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 300
           + KQAQLAKA    DINPNLIEVSERV  KEK KEPIP++EWWD ++L +G Y ++ DG 
Sbjct: 480 KVKQAQLAKAN--DDINPNLIEVSERVPRKEKPKEPIPDVEWWDANVLTNGEYGEITDGT 539

Query: 301 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360
           +    ++ +K+T Y+EHPRPIEPP E APPPPQPLKLTKKEQKKLRTQRRLAKEK++QEM
Sbjct: 540 ITESHLKIEKLTHYIEHPRPIEPPAEAAPPPPQPLKLTKKEQKKLRTQRRLAKEKEKQEM 599

Query: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 420
           IRQGL+EPPK KVKMSNLMKVLGSEATQDPTKLEKEIR AAAEREQAH DRN ARKLTPA
Sbjct: 600 IRQGLLEPPKAKVKMSNLMKVLGSEATQDPTKLEKEIRTAAAEREQAHTDRNAARKLTPA 659

Query: 421 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480
           E+REKKERKLFDD  ++E  VSVYKI  LSHP+ RFKV++NARENRLTGC+V+ D +SV+
Sbjct: 660 EKREKKERKLFDDPTTVETIVSVYKIKKLSHPKTRFKVEMNARENRLTGCSVMTDEMSVV 719

Query: 481 VVEGGSKSIKRYGKLMLRRINW-AASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKF 540
           VVEG SK+IKRYGKLM++RINW  A  KE  E +E +    NKC LVWQGS+ K SF++F
Sbjct: 720 VVEGKSKAIKRYGKLMMKRINWEEAERKEGNEDEEEEVNGGNKCWLVWQGSIGKPSFHRF 779

Query: 541 FIQECMTEAAARKIFADAGVGHYWDLAVNFSDD 573
            + EC+TE+ A+K+F DAGV HYWDLAVN+SDD
Sbjct: 780 HVHECVTESTAKKVFMDAGVVHYWDLAVNYSDD 786

[Close]

BLAST of Moc09g34400 vs. ExPASy Swiss-Prot
Match: Q5ZJ85 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Gallus gallus OX=9031 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-72
Identity = 206/555 (37.12%), Postives = 303/555 (54.59%), Query Frame = 0


Query: 30  KLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFE 89
           ++E++ K    +  P+P   I +      +S S  LP             A        E
Sbjct: 152 QIEERKKQLSFISPPTPQPKISS------SSQSERLPIGNTVQPS----QAATFMNDAIE 211

Query: 90  AVKRAQELAARM--------GFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDAL 149
             ++A EL AR+        G   +     L NL    IA      +   K   L LD  
Sbjct: 212 KARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILDEQ 271

Query: 150 GREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELEVDPESNPHFDERMGINK 209
           GR +D  G  + +T    + TLK NI   K++ F Q LK +   D ESN +FD R+ I  
Sbjct: 272 GRTVDATGKEIELT--HRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTYFDLRVSI-- 331

Query: 210 TKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNL 269
           T   R KR  F+F E+GK+ K A+  +LR+K   AQ K+ + + +Q A+ K     +  L
Sbjct: 332 TPAQRQKR-TFKFHEKGKFEKIAQ--RLRTK---AQLKKLQAEISQAAR-KTGIHTSTKL 391

Query: 270 IEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRP 329
             ++ +   KE  +  IPEIEWWD  ++ +G   D+  G  ++ K     IT  VEHP  
Sbjct: 392 ALITPK---KELKEGEIPEIEWWDSYIIPNGL--DLKGG-TSSKKDEYFGITNLVEHPAQ 451

Query: 330 IEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMK 389
           + PPV+   P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SNLM+
Sbjct: 452 LNPPVDSDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMR 511

Query: 390 VLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENF 449
           VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +KL +D  S    
Sbjct: 512 VLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKAKKIKKLKEDV-SQGVH 571

Query: 450 VSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRI 509
           ++VY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML RI
Sbjct: 572 IAVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHRI 631

Query: 510 NWAASV-----KEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFA 569
            W         ++++E+DE   K  NKCSLVW+G+    SF +   ++C TE  AR+ F 
Sbjct: 632 KWDEQTSNTKGEDDDESDEESVKKTNKCSLVWEGTAKDRSFGEMKFKQCPTENMAREHFK 678

Query: 570 DAGVGHYWDLAVNFS 571
             G  HYWDLA++ S
Sbjct: 692 KHGAEHYWDLALSES 678

[Close]

BLAST of Moc09g34400 vs. ExPASy Swiss-Prot
Match: O43395 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1 SV=2)

HSP 1 Score: 273.1 bits (697), Expect = 7.2e-72
Identity = 188/498 (37.75%), Postives = 277/498 (55.62%), Query Frame = 0


Query: 89  EAVKRAQELAARM--------GFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDA 148
           E  ++A EL AR+        G   +     L NL    IA      +   K   L LD 
Sbjct: 201 EKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILDE 260

Query: 149 LGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELEVDPESNPHFDERMGIN 208
            GR +D  G  + +T    + TLK NI   K++ F Q LK +   D ESN  FD R+ I 
Sbjct: 261 QGRTVDATGKEIELT--HRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTFFDPRVSIA 320

Query: 209 KTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPN 268
            +   + +R  F+F ++GK+ K A+ ++ +++  + QA      +   A  K     +  
Sbjct: 321 PS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EISQAARKTGIHTSTR 380

Query: 269 LIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKD--KITIYVEH 328
           L  ++ +   KE  +  IPEIEWWD  ++ +G +D         +  R+D   IT  VEH
Sbjct: 381 LALIAPK---KELKEGDIPEIEWWDSYIIPNG-FD-----LTEENPKREDYFGITNLVEH 440

Query: 329 PRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSN 388
           P  + PPV+   P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SN
Sbjct: 441 PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN 500

Query: 389 LMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSL 448
           LM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +KL +D  S 
Sbjct: 501 LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDI-SQ 560

Query: 449 ENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLML 508
              +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML
Sbjct: 561 GVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLML 620

Query: 509 RRINWAASVK-----EEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARK 568
            RI W          ++EE+DE   K  NKC LVW+G+    SF +   ++C TE  AR+
Sbjct: 621 HRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMARE 677

Query: 569 IFADAGVGHYWDLAVNFS 571
            F   G  HYWDLA++ S
Sbjct: 681 HFKKHGAEHYWDLALSES 677

[Close]

BLAST of Moc09g34400 vs. ExPASy Swiss-Prot
Match: Q5R5F1 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Pongo abelii OX=9601 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 7.2e-72
Identity = 188/498 (37.75%), Postives = 277/498 (55.62%), Query Frame = 0


Query: 89  EAVKRAQELAARM--------GFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDA 148
           E  ++A EL AR+        G   +     L NL    IA      +   K   L LD 
Sbjct: 201 EKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILDE 260

Query: 149 LGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELEVDPESNPHFDERMGIN 208
            GR +D  G  + +T    + TLK NI   K++ F Q LK +   D ESN  FD R+ I 
Sbjct: 261 QGRTVDATGKEIELT--HRMPTLKANIRAVKREQFRQQLKEKPSEDMESNTFFDPRVSIA 320

Query: 209 KTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPN 268
            +   + +R  F+F ++GK+ K A+ ++ +++  + QA      +   A  K     +  
Sbjct: 321 PS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EISQAARKTGIHTSTR 380

Query: 269 LIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKD--KITIYVEH 328
           L  ++ +   KE  +  IPEIEWWD  ++ +G +D         +  R+D   IT  VEH
Sbjct: 381 LALIAPK---KELKEGDIPEIEWWDSYIIPNG-FD-----LTEENPKREDYFGITNLVEH 440

Query: 329 PRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSN 388
           P  + PPV+   P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SN
Sbjct: 441 PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN 500

Query: 389 LMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSL 448
           LM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +KL +D  S 
Sbjct: 501 LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDI-SQ 560

Query: 449 ENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLML 508
              +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML
Sbjct: 561 GVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLML 620

Query: 509 RRINWAASVK-----EEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARK 568
            RI W          ++EE+DE   K  NKC LVW+G+    SF +   ++C TE  AR+
Sbjct: 621 HRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMARE 677

Query: 569 IFADAGVGHYWDLAVNFS 571
            F   G  HYWDLA++ S
Sbjct: 681 HFKKHGAEHYWDLALSES 677

[Close]

BLAST of Moc09g34400 vs. ExPASy Swiss-Prot
Match: Q922U1 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=1 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.4e-72
Identity = 189/498 (37.95%), Postives = 276/498 (55.42%), Query Frame = 0


Query: 89  EAVKRAQELAARM--------GFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDA 148
           E  ++A EL AR+        G   +     L NL    IA      +   K   L LD 
Sbjct: 201 EKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILDE 260

Query: 149 LGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELEVDPESNPHFDERMGIN 208
            GR +D  G  V +T    + TLK NI   K++ F Q LK +   D ESN  FD R+ I 
Sbjct: 261 QGRTVDATGKEVELT--HRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTFFDPRVSIA 320

Query: 209 KTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPN 268
            +   + +R  F+F ++GK+ K A+ ++ +++  + QA      +   A  K     +  
Sbjct: 321 PS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EISQAARKTGIHTSTR 380

Query: 269 LIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKD--KITIYVEH 328
           L  ++ +   KE  +  IPEIEWWD  ++ +G +D         +  R+D   IT  VEH
Sbjct: 381 LALIAPK---KELKEGDIPEIEWWDSYIIPNG-FD-----LTEENPKREDYFGITNLVEH 440

Query: 329 PRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSN 388
           P  + PPV+   P    + LTKKEQKKLR Q R   +K+ QE +R GL  PP+PKV++SN
Sbjct: 441 PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLTPPPEPKVRISN 500

Query: 389 LMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSL 448
           LM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +KL +D  S 
Sbjct: 501 LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDI-SQ 560

Query: 449 ENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLML 508
              +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML
Sbjct: 561 GVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLML 620

Query: 509 RRINWAASVK-----EEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARK 568
            RI W          ++EE+DE   K  NKC LVW+G+    SF +   ++C TE  AR+
Sbjct: 621 HRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMARE 677

Query: 569 IFADAGVGHYWDLAVNFS 571
            F   G  HYWDLA++ S
Sbjct: 681 HFKKHGAEHYWDLALSES 677

[Close]

BLAST of Moc09g34400 vs. ExPASy TrEMBL
Match: A0A6J1CBS3 (protein RDM16 isoform X5 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 574/574 (100.00%), Postives = 574/574 (100.00%), Query Frame = 0


Query: 1   MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 60
           MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS
Sbjct: 1   MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 60

Query: 61  SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 120
           SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI
Sbjct: 61  SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 120

Query: 121 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 121 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180

Query: 181 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 240
           ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER
Sbjct: 181 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 240

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 300
           REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF
Sbjct: 241 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 300

Query: 301 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360
           VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 301 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360

Query: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 420
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 420

Query: 421 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480
           ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 421 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480

Query: 481 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 540
           VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF
Sbjct: 481 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 540

Query: 541 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 575
           IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 541 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 574

[Close]

BLAST of Moc09g34400 vs. ExPASy TrEMBL
Match: A0A6J1CB57 (protein RDM16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 574/574 (100.00%), Postives = 574/574 (100.00%), Query Frame = 0


Query: 1   MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 60
           MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS
Sbjct: 360 MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 419

Query: 61  SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 120
           SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI
Sbjct: 420 SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 479

Query: 121 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 480 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 539

Query: 181 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 240
           ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER
Sbjct: 540 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 599

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 300
           REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF
Sbjct: 600 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 659

Query: 301 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360
           VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 660 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 719

Query: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 420
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 720 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 779

Query: 421 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480
           ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 780 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 839

Query: 481 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 540
           VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF
Sbjct: 840 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 899

Query: 541 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 575
           IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 900 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 933

[Close]

BLAST of Moc09g34400 vs. ExPASy TrEMBL
Match: A0A6J1CCW0 (protein RDM16 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 574/574 (100.00%), Postives = 574/574 (100.00%), Query Frame = 0


Query: 1   MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 60
           MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS
Sbjct: 67  MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 126

Query: 61  SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 120
           SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI
Sbjct: 127 SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 186

Query: 121 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 187 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 246

Query: 181 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 240
           ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER
Sbjct: 247 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 306

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 300
           REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF
Sbjct: 307 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 366

Query: 301 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360
           VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 367 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 426

Query: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 420
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 427 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 486

Query: 421 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480
           ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 487 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 546

Query: 481 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 540
           VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF
Sbjct: 547 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 606

Query: 541 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 575
           IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 607 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 640

[Close]

BLAST of Moc09g34400 vs. ExPASy TrEMBL
Match: A0A6J1CEQ9 (protein RDM16 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 574/574 (100.00%), Postives = 574/574 (100.00%), Query Frame = 0


Query: 1   MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 60
           MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS
Sbjct: 57  MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 116

Query: 61  SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 120
           SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI
Sbjct: 117 SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 176

Query: 121 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 177 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 236

Query: 181 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 240
           ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER
Sbjct: 237 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 296

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 300
           REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF
Sbjct: 297 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 356

Query: 301 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360
           VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 357 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 416

Query: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 420
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 417 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 476

Query: 421 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480
           ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 477 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 536

Query: 481 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 540
           VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF
Sbjct: 537 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 596

Query: 541 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 575
           IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 597 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 630

[Close]

BLAST of Moc09g34400 vs. ExPASy TrEMBL
Match: A0A6J1CBF9 (protein RDM16 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 574/574 (100.00%), Postives = 574/574 (100.00%), Query Frame = 0


Query: 1   MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 60
           MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS
Sbjct: 354 MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 413

Query: 61  SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 120
           SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI
Sbjct: 414 SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 473

Query: 121 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 474 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 533

Query: 181 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 240
           ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER
Sbjct: 534 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 593

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 300
           REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF
Sbjct: 594 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 653

Query: 301 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360
           VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 654 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 713

Query: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 420
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 714 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 773

Query: 421 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480
           ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 774 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 833

Query: 481 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 540
           VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF
Sbjct: 834 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 893

Query: 541 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 575
           IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 894 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 927

[Close]

BLAST of Moc09g34400 vs. TAIR 10
Match: AT1G28060.1 (Pre-mRNA-splicing factor 3 )

HSP 1 Score: 695.7 bits (1794), Expect = 3.2e-200
Identity = 375/573 (65.45%), Postives = 449/573 (78.36%), Query Frame = 0


Query: 1   MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 60
           +QK LA++LK +PL+KK    +S  S   ++            PS TT     +S G  S
Sbjct: 240 LQKGLADRLKNLPLLKKATKPTSEGSPHTRVP-----------PSTTT---PAVSTG-TS 299

Query: 61  SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 120
            +STLP     H G     AG  SI + EAVKRAQELAA MGF QD EFAP+INLFPG  
Sbjct: 300 FASTLP-----HTG----LAGFGSIANIEAVKRAQELAANMGFHQDREFAPVINLFPGQA 359

Query: 121 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
            +D+ V Q+P K PVLR+DALGREIDE GNV+++TKPSNLSTLKVNINK+KKDAFQILKP
Sbjct: 360 PSDMTVAQRPEKPPVLRVDALGREIDEHGNVISVTKPSNLSTLKVNINKKKKDAFQILKP 419

Query: 181 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 240
           +LE D + NP+FD RMGI++ K+LRPKRM+FQFVEEGKW+++AE +K +S FGEA+AKE 
Sbjct: 420 QLEADLKENPYFDTRMGIDEKKILRPKRMSFQFVEEGKWTRDAENLKFKSHFGEAKAKEL 479

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 300
           + KQAQLAKA    DINPNLIEVSERV  KEK KEPIP++EWWD ++L +G Y ++ DG 
Sbjct: 480 KVKQAQLAKAN--DDINPNLIEVSERVPRKEKPKEPIPDVEWWDANVLTNGEYGEITDGT 539

Query: 301 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360
           +    ++ +K+T Y+EHPRPIEPP E APPPPQPLKLTKKEQKKLRTQRRLAKEK++QEM
Sbjct: 540 ITESHLKIEKLTHYIEHPRPIEPPAEAAPPPPQPLKLTKKEQKKLRTQRRLAKEKEKQEM 599

Query: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 420
           IRQGL+EPPK KVKMSNLMKVLGSEATQDPTKLEKEIR AAAEREQAH DRN ARKLTPA
Sbjct: 600 IRQGLLEPPKAKVKMSNLMKVLGSEATQDPTKLEKEIRTAAAEREQAHTDRNAARKLTPA 659

Query: 421 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480
           E+REKKERKLFDD  ++E  VSVYKI  LSHP+ RFKV++NARENRLTGC+V+ D +SV+
Sbjct: 660 EKREKKERKLFDDPTTVETIVSVYKIKKLSHPKTRFKVEMNARENRLTGCSVMTDEMSVV 719

Query: 481 VVEGGSKSIKRYGKLMLRRINW-AASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKF 540
           VVEG SK+IKRYGKLM++RINW  A  KE  E +E +    NKC LVWQGS+ K SF++F
Sbjct: 720 VVEGKSKAIKRYGKLMMKRINWEEAERKEGNEDEEEEVNGGNKCWLVWQGSIGKPSFHRF 779

Query: 541 FIQECMTEAAARKIFADAGVGHYWDLAVNFSDD 573
            + EC+TE+ A+K+F DAGV HYWDLAVN+SDD
Sbjct: 780 HVHECVTESTAKKVFMDAGVVHYWDLAVNYSDD 786

[Close]

BLAST of Moc09g34400 vs. TAIR 10
Match: AT3G55930.1 (Pre-mRNA-splicing factor 3 )

HSP 1 Score: 332.8 bits (852), Expect = 5.5e-91
Identity = 206/450 (45.78%), Postives = 264/450 (58.67%), Query Frame = 0


Query: 129 KPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPES 188
           K  K  VLR+DALGREIDE GNV+++TKP N STL VNI                   ++
Sbjct: 91  KQTKGFVLRVDALGREIDEHGNVISVTKPINHSTLMVNIR------------------DN 150

Query: 189 NPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLA 248
            PH                                                      +L+
Sbjct: 151 VPH-----------------------------------------------------RKLS 210

Query: 249 KAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVG--DGFVANDKI 308
           K  +                            EWWD  +L   T +++      +  D I
Sbjct: 211 KILS----------------------------EWWDAKILTDDTINELSCDPNILIMDTI 270

Query: 309 RKDKITI-----YVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 368
            ++ + +     ++EHP PIEPP E A PPPQPLK+TK+E+KKLRT RR+AKE +++EMI
Sbjct: 271 TENHLNMKVFNCHIEHPFPIEPPAEAASPPPQPLKMTKEERKKLRTLRRVAKEMEKREMI 330

Query: 369 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 428
            QG +EP K KVKMSNLMKV  SEATQ+PTKLEKEIR  AAEREQAH+DRN+ARKLTPAE
Sbjct: 331 SQGRVEPQKSKVKMSNLMKVRASEATQNPTKLEKEIRTEAAEREQAHMDRNVARKLTPAE 390

Query: 429 RREKKERKLFDDANS-LENFVSVYKI-YDLSHPQARFKVDVNARENRLTGCAVICDGISV 488
           +REKKERKLF D  + +E  VSVYKI   LS P+ RFKV +NA++N LTG +V+ DG+SV
Sbjct: 391 KREKKERKLFGDPTTVVETIVSVYKINKKLSDPKTRFKVRMNAKQNILTGFSVMMDGMSV 437

Query: 489 LVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKF 548
           +VVEG  K+I RY KLML+RINW  + K+E+E +       NKC LVWQGSV K SF++F
Sbjct: 451 VVVEGKRKAINRYEKLMLKRINWEEAEKKEDEEENGG----NKCCLVWQGSVEKPSFHRF 437

Query: 549 FIQECMTEAAARKIFADAGVGHYWDLAVNF 570
            +QEC+T++ A+K+F DAGV HYWDLA+N+
Sbjct: 511 HVQECLTKSDAKKVFNDAGVAHYWDLALNY 437

[Close]

BLAST of Moc09g34400 vs. TAIR 10
Match: AT3G56790.1 (RNA splicing factor-related )

HSP 1 Score: 79.0 bits (193), Expect = 1.4e-14
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 331 PPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSE-ATQD 390
           PPQP KLTKKE+KKL+T RR+AKEK++Q+MIRQ L EP K KVK+SNLMKVL SE ATQD
Sbjct: 144 PPQPFKLTKKEEKKLQTLRRVAKEKEKQKMIRQALFEPQKSKVKLSNLMKVLASELATQD 203

HSP 2 Score: 61.6 bits (148), Expect = 2.3e-09
Identity = 46/105 (43.81%), Postives = 52/105 (49.52%), Query Frame = 0


Query: 77  NVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVL 136
           ++ +  TS    EAVKR QEL                       A D AV  K  K   L
Sbjct: 69  SIASDTTSSQILEAVKRFQEL-----------------------AIDTAVAHKQTKGFFL 128

Query: 137 RLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQ-ILKP 181
           R+D LGREIDE G+V+      NLSTL VN NK KKD FQ ILKP
Sbjct: 129 RVDVLGREIDEYGHVI------NLSTLMVNNNKHKKDVFQNILKP 144

The following BLAST results are available for this feature:

BLAST of Moc09g34400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139034.1	0.0e+00	100.00	protein RDM16 isoform X5 [Momordica charantia]	[more]
XP_022139032.1	0.0e+00	100.00	protein RDM16 isoform X3 [Momordica charantia]	[more]
XP_022139031.1	0.0e+00	100.00	protein RDM16 isoform X2 [Momordica charantia]	[more]
XP_022139030.1	0.0e+00	100.00	protein RDM16 isoform X1 [Momordica charantia]	[more]
XP_022139033.1	0.0e+00	100.00	protein RDM16 isoform X4 [Momordica charantia]	[more]

BLAST of Moc09g34400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7E7	4.5e-199	65.45	Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1	[more]
Q5ZJ85	1.5e-72	37.12	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Gallus gallus OX=9031 GN=PRPF3 PE=...	[more]
O43395	7.2e-72	37.75	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1...	[more]
Q5R5F1	7.2e-72	37.75	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Pongo abelii OX=9601 GN=PRPF3 PE=2...	[more]
Q922U1	9.4e-72	37.95	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=...	[more]

BLAST of Moc09g34400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CBS3	0.0e+00	100.00	protein RDM16 isoform X5 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CB57	0.0e+00	100.00	protein RDM16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CCW0	0.0e+00	100.00	protein RDM16 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CEQ9	0.0e+00	100.00	protein RDM16 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CBF9	0.0e+00	100.00	protein RDM16 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]

BLAST of Moc09g34400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28060.1	3.2e-200	65.45	Pre-mRNA-splicing factor 3	[more]
AT3G55930.1	5.5e-91	45.78	Pre-mRNA-splicing factor 3	[more]
AT3G56790.1	1.4e-14	75.00	RNA splicing factor-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 335..357
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR14212:SF2	SUBFAMILY NOT NAMED	coord: 3..573
IPR013881	Pre-mRNA-splicing factor 3	PFAM	PF08572	PRP3	coord: 189..418 e-value: 1.1E-62 score: 211.6
IPR010541	Domain of unknown function DUF1115	PFAM	PF06544	DUF1115	coord: 443..566 e-value: 6.8E-41 score: 139.8
IPR027104	U4/U6 small nuclear ribonucleoprotein Prp3	PANTHER	PTHR14212	U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED	coord: 3..573

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g34400.1	Moc09g34400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex