Moc09g33950 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g33950
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	CASP-like protein
Location	chr9: 25913168 .. 25914201 (-)
RNA-Seq Expression	Moc09g33950
Synteny	Moc09g33950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGATCCCCTCAGTCCCTCCGCAACGGCGGCGGCTCGCCTTCGCCGCACGCTCGAATCCCTACCCCTCACCACCACTTCCACTCCACCGTCTCCGTCCACAAGCTCAAGCGGTTCAACTCTCTCATCCTCGTCTTCCGTCTCTCTACCTTCTGCTTCTCCCTCGCCTCCGCCGTCTTCATGCTCACCAACTCTCGCGGCGCCTCTGGATCCGATTCTCCTCGCTGGTACGATTTCGACGCCTTCAGGTACGCAAACGCACGCCTCTTTCCGACTCCGTTTCCTTTTCGCCTTTCTGTTTGCTTGCCGAGAAAATCTAGGGCGCACCGATTTACAATTTTGAGGAAAAAGAGGAACACGAAACTAATCAATCACTTCGCGCCTGATAATTTCATCAAGAATTCCTGGAATCTCGAAACACATTTCGTCCTCAAACGAAACACTACTAGAATAGAATCAGCCGATTTTCTTTCCACTTTCTCGGCAGCCAAACAGGCTCCCAGCGAGAGCTAACAATGATCGAAAATCTCCGACCAGGTACGTCTTCGCCGCGAACGCAATAGTCGCCGTGTACTCTCTGTTCGAAATGGTCGCCGCCGTGTGGGAAATCTCCAGAGACGACACTCTCTTCCCGGAGATTTTACAGGTCTGGTTCGACTTCGGGCACGACCAGGTCAAAACCCTAACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGATCCAATTAGGGCTCTGATTCCATAGGCGTTCGCCTACCTTCTTCTCTCTGCGGACTCGGCAGGGACGGCTCTGGCGATAACTCTGAGAGGAACCGACACGTGTACGGCCACGAGCGCGTTCTGCATTCAATCAACCATCTCGATCGCACTGGGATTTGCCGGTTTCCTGTTCCTCGGGTTCTCGTCGCTGCTTTCGGGTTTCCGGGTCGTCTGTTTCCTAATCAACGGCTCTCGTTTTCACTTCTAG

mRNA sequence

ATGCGATCCCCTCAGTCCCTCCGCAACGGCGGCGGCTCGCCTTCGCCGCACGCTCGAATCCCTACCCCTCACCACCACTTCCACTCCACCGTCTCCGTCCACAAGCTCAAGCGGTTCAACTCTCTCATCCTCGTCTTCCGTCTCTCTACCTTCTGCTTCTCCCTCGCCTCCGCCGTCTTCATGCTCACCAACTCTCGCGGCGCCTCTGGATCCGATTCTCCTCGCTGGTACGATTTCGACGCCTTCAGGTACGTCTTCGCCGCGAACGCAATAGTCGCCGTGTACTCTCTGTTCGAAATGGTCGCCGCCGTGTGGGAAATCTCCAGAGACGACACTCTCTTCCCGGAGATTTTACAGGTCTGGTTCGACTTCGGGCACGACCAGGCGTTCGCCTACCTTCTTCTCTCTGCGGACTCGGCAGGGACGGCTCTGGCGATAACTCTGAGAGGAACCGACACGTGTACGGCCACGAGCGCGTTCTGCATTCAATCAACCATCTCGATCGCACTGGGATTTGCCGGTTTCCTGTTCCTCGGGTTCTCGTCGCTGCTTTCGGGTTTCCGGGTCGTCTGTTTCCTAATCAACGGCTCTCGTTTTCACTTCTAG

Coding sequence (CDS)

ATGCGATCCCCTCAGTCCCTCCGCAACGGCGGCGGCTCGCCTTCGCCGCACGCTCGAATCCCTACCCCTCACCACCACTTCCACTCCACCGTCTCCGTCCACAAGCTCAAGCGGTTCAACTCTCTCATCCTCGTCTTCCGTCTCTCTACCTTCTGCTTCTCCCTCGCCTCCGCCGTCTTCATGCTCACCAACTCTCGCGGCGCCTCTGGATCCGATTCTCCTCGCTGGTACGATTTCGACGCCTTCAGGTACGTCTTCGCCGCGAACGCAATAGTCGCCGTGTACTCTCTGTTCGAAATGGTCGCCGCCGTGTGGGAAATCTCCAGAGACGACACTCTCTTCCCGGAGATTTTACAGGTCTGGTTCGACTTCGGGCACGACCAGGCGTTCGCCTACCTTCTTCTCTCTGCGGACTCGGCAGGGACGGCTCTGGCGATAACTCTGAGAGGAACCGACACGTGTACGGCCACGAGCGCGTTCTGCATTCAATCAACCATCTCGATCGCACTGGGATTTGCCGGTTTCCTGTTCCTCGGGTTCTCGTCGCTGCTTTCGGGTTTCCGGGTCGTCTGTTTCCTAATCAACGGCTCTCGTTTTCACTTCTAG

Protein sequence

MRSPQSLRNGGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCFSLASAVFMLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFPEILQVWFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFAGFLFLGFSSLLSGFRVVCFLINGSRFHF

Homology

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BLAST of Moc09g33950 vs. NCBI nr
Match: XP_022138955.1 (CASP-like protein 4C1 [Momordica charantia])

HSP 1 Score: 393.7 bits (1010), Expect = 9.8e-106
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MRSPQSLRNGGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCFSLASAVF 60
           MRSPQSLRNGGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCFSLASAVF
Sbjct: 1   MRSPQSLRNGGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCFSLASAVF 60

Query: 61  MLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFPEILQV 120
           MLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFPEILQV
Sbjct: 61  MLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFPEILQV 120

Query: 121 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFAGFLFLGF 180
           WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFAGFLFLGF
Sbjct: 121 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFAGFLFLGF 180

Query: 181 SSLLSGFRVVCFLINGSRFHF 202
           SSLLSGFRVVCFLINGSRFHF
Sbjct: 181 SSLLSGFRVVCFLINGSRFHF 201

[Close]

BLAST of Moc09g33950 vs. NCBI nr
Match: XP_023524861.1 (CASP-like protein 4C1 [Cucurbita pepo subsp. pepo] >KAG6600997.1 CASP-like protein 4C2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031611.1 CASP-like protein 4C2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 363.2 bits (931), Expect = 1.4e-96
Identity = 186/200 (93.00%), Postives = 193/200 (96.50%), Query Frame = 0


Query: 1   MRSPQSLRNGGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCFSLASAVF 60
           MRSPQSLRNGGG+PSPHARIPTPHHHFHSTVSV KLKRFNSLILVFRLSTFCFSLASAVF
Sbjct: 1   MRSPQSLRNGGGTPSPHARIPTPHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAVF 60

Query: 61  MLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFPEILQV 120
           M+TNSRG SGSDSPRWYDFDAFRYVFAANAIVAVYSLFEM+A+VWEISR+ TLFPEILQV
Sbjct: 61  MITNSRG-SGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV 120

Query: 121 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFAGFLFLGF 180
           WFDFGHDQAFAYLLLSA SAGTAL ITLRGTDTC ATSAFC+QSTISIALGFAGFLFLG 
Sbjct: 121 WFDFGHDQAFAYLLLSAGSAGTALLITLRGTDTCRATSAFCVQSTISIALGFAGFLFLGL 180

Query: 181 SSLLSGFRVVCFLINGSRFH 201
           SSLLSGFRVVCF+INGSRFH
Sbjct: 181 SSLLSGFRVVCFVINGSRFH 199

[Close]

BLAST of Moc09g33950 vs. NCBI nr
Match: XP_004147690.1 (CASP-like protein 4C1 [Cucumis sativus] >KGN50549.1 hypothetical protein Csa_021394 [Cucumis sativus])

HSP 1 Score: 361.3 bits (926), Expect = 5.4e-96
Identity = 187/205 (91.22%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MRSPQSLRN----GGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCFSLA 60
           MRSPQSLRN    GGG+PSPHARIPTPHHHFHSTVSV KLKRFNSLILVFRLSTFCFSLA
Sbjct: 1   MRSPQSLRNGGVGGGGTPSPHARIPTPHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLA 60

Query: 61  SAVFMLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFPE 120
           SAVFM+TNSRG SGSDSPRWYDFDAFRYVFAANAIVAVYSLFEM+A+VWEISR+ TLFPE
Sbjct: 61  SAVFMITNSRG-SGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPE 120

Query: 121 ILQVWFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFAGFL 180
           ILQVWFDFGHDQAFAYLLLSADSAGTALAITL+GTDTC  TSAFC+QSTISIALGFAGFL
Sbjct: 121 ILQVWFDFGHDQAFAYLLLSADSAGTALAITLKGTDTCKVTSAFCVQSTISIALGFAGFL 180

Query: 181 FLGFSSLLSGFRVVCFLINGSRFHF 202
           FLG SSLLSGFRVVCF+INGSRFHF
Sbjct: 181 FLGLSSLLSGFRVVCFVINGSRFHF 204

[Close]

BLAST of Moc09g33950 vs. NCBI nr
Match: XP_038893216.1 (CASP-like protein 4C1 [Benincasa hispida])

HSP 1 Score: 360.9 bits (925), Expect = 7.0e-96
Identity = 187/206 (90.78%), Postives = 195/206 (94.66%), Query Frame = 0


Query: 1   MRSPQSLRN-----GGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCFSL 60
           MRSPQSLRN     GGG+PSPHARIPTPHHHFHSTVSV KLKRFNSLILVFRLSTFCFSL
Sbjct: 1   MRSPQSLRNGGAGGGGGTPSPHARIPTPHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSL 60

Query: 61  ASAVFMLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFP 120
           ASAVFM+TNSRG SGSDSPRWYDFDAFRYVFAANAIVAVYSLFEM+A+VWEISR+ TLFP
Sbjct: 61  ASAVFMITNSRG-SGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFP 120

Query: 121 EILQVWFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFAGF 180
           EILQVWFDFGHDQAFAYLLLSADSAGTALAITL+GTDTC  TSAFC+QSTISIALGFAGF
Sbjct: 121 EILQVWFDFGHDQAFAYLLLSADSAGTALAITLKGTDTCKVTSAFCVQSTISIALGFAGF 180

Query: 181 LFLGFSSLLSGFRVVCFLINGSRFHF 202
           LFLG SSLLSGFRVVCF+INGSRFHF
Sbjct: 181 LFLGLSSLLSGFRVVCFVINGSRFHF 205

[Close]

BLAST of Moc09g33950 vs. NCBI nr
Match: XP_022957593.1 (CASP-like protein 4C1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 360.1 bits (923), Expect = 1.2e-95
Identity = 185/200 (92.50%), Postives = 192/200 (96.00%), Query Frame = 0


Query: 1   MRSPQSLRNGGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCFSLASAVF 60
           MRSPQSLRNGGG+PSPHARIPTPHHHFHSTVSV KLKRFNSLILVFRLSTFCFSLASAVF
Sbjct: 1   MRSPQSLRNGGGTPSPHARIPTPHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAVF 60

Query: 61  MLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFPEILQV 120
           M+TNSRG SGSDSPRWYDFDAFRYVFAANAIVAVYSLFEM+A+VWEISR+ TLFPEILQV
Sbjct: 61  MITNSRG-SGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV 120

Query: 121 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFAGFLFLGF 180
           WFDFGHDQAFAYLLLSA SAGTAL ITLR TDTC ATSAFC+QSTISIALGFAGFLFLG 
Sbjct: 121 WFDFGHDQAFAYLLLSAGSAGTALLITLRRTDTCRATSAFCVQSTISIALGFAGFLFLGL 180

Query: 181 SSLLSGFRVVCFLINGSRFH 201
           SSLLSGFRVVCF+INGSRFH
Sbjct: 181 SSLLSGFRVVCFVINGSRFH 199

[Close]

BLAST of Moc09g33950 vs. ExPASy Swiss-Prot
Match: B9SR15 (CASP-like protein 4C1 OS=Ricinus communis OX=3988 GN=RCOM_0464280 PE=2 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.2e-77
Identity = 160/202 (79.21%), Postives = 171/202 (84.65%), Query Frame = 0


Query: 1   MRSPQSLRNG-GGSPSPH-ARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCFSLASA 60
           MRSPQSLRNG   SPSP   R PTP  HFHSTVS+ KLKRFN LILVFRLSTFCFSLAS+
Sbjct: 1   MRSPQSLRNGETPSPSPRPPRFPTP--HFHSTVSLQKLKRFNLLILVFRLSTFCFSLASS 60

Query: 61  VFMLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFPEIL 120
           VFMLTN         P WY FDAFRYVFAANAIVA+YSLFEM A+VWEISR +TLFPEIL
Sbjct: 61  VFMLTN---------PTWYHFDAFRYVFAANAIVAIYSLFEMAASVWEISRGNTLFPEIL 120

Query: 121 QVWFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFAGFLFL 180
           QVWFDFGHDQ FAYLLLSADSA TALA TL+G DTC A++AFC+QS I+IALGFAGFLFL
Sbjct: 121 QVWFDFGHDQVFAYLLLSADSAATALAKTLKGGDTCAASNAFCVQSYIAIALGFAGFLFL 180

Query: 181 GFSSLLSGFRVVCFLINGSRFH 201
           G SSLLSGFRVVCFLINGSRF+
Sbjct: 181 GLSSLLSGFRVVCFLINGSRFY 191

[Close]

BLAST of Moc09g33950 vs. ExPASy Swiss-Prot
Match: B9HTK2 (CASP-like protein 4C2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_822486 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 3.7e-71
Identity = 147/200 (73.50%), Postives = 161/200 (80.50%), Query Frame = 0


Query: 1   MRSPQSLRNGGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCFSLASAVF 60
           MRSPQ  R+GG +            HF STVSV KLKRFNSLILVFR + FCFSLASAVF
Sbjct: 1   MRSPQPHRSGGDT----------QQHFQSTVSVQKLKRFNSLILVFRFAAFCFSLASAVF 60

Query: 61  MLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFPEILQV 120
           MLTNSR   GSDS  WY+FDAFRYVFAANAIVA+YSLFEM A+VWEISR+ TLFPEI QV
Sbjct: 61  MLTNSR---GSDSLHWYNFDAFRYVFAANAIVAIYSLFEMAASVWEISRNATLFPEICQV 120

Query: 121 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFAGFLFLGF 180
           WFDFGHDQ FAYLLLSA++AGT LA TL+  DTCT   AFC+QS I+I LGFAGFLFLG 
Sbjct: 121 WFDFGHDQVFAYLLLSANTAGTELARTLK--DTCTDNKAFCVQSDIAIVLGFAGFLFLGI 180

Query: 181 SSLLSGFRVVCFLINGSRFH 201
           SSL SGFRVVCF+INGSRF+
Sbjct: 181 SSLFSGFRVVCFIINGSRFY 185

[Close]

BLAST of Moc09g33950 vs. ExPASy Swiss-Prot
Match: B9HMF8 (CASP-like protein 4C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820327 PE=3 SV=2)

HSP 1 Score: 265.8 bits (678), Expect = 4.0e-70
Identity = 144/200 (72.00%), Postives = 158/200 (79.00%), Query Frame = 0


Query: 1   MRSPQSLRNGGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCFSLASAVF 60
           MR PQ  RNGG +            HFHST+S+ KLKRFNSLILVFR S FCFSLASAVF
Sbjct: 1   MRFPQPHRNGGET----------QQHFHSTISLQKLKRFNSLILVFRFSAFCFSLASAVF 60

Query: 61  MLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFPEILQV 120
           MLTNSR   GSDS  WY+FDAFRYVFAANAIVAVYSLFEM AAVWEISR+ TLFPE+ QV
Sbjct: 61  MLTNSR---GSDSFHWYNFDAFRYVFAANAIVAVYSLFEMTAAVWEISRNATLFPEVCQV 120

Query: 121 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFAGFLFLGF 180
           WFDFGHDQ FAYLLLSA+S GT +A T++  D CT    FC+QS I+IALGF GFLFLG 
Sbjct: 121 WFDFGHDQVFAYLLLSANSTGTEMARTMK--DACTDNKPFCVQSDIAIALGFVGFLFLGV 180

Query: 181 SSLLSGFRVVCFLINGSRFH 201
           SSL SGFRVVCF+INGSRF+
Sbjct: 181 SSLFSGFRVVCFIINGSRFY 185

[Close]

BLAST of Moc09g33950 vs. ExPASy Swiss-Prot
Match: Q9M2U0 (CASP-like protein 4C1 OS=Arabidopsis thaliana OX=3702 GN=At3g55390 PE=2 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.2e-67
Identity = 138/200 (69.00%), Postives = 154/200 (77.00%), Query Frame = 0


Query: 1   MRSPQSLRNGGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCFSLASAVF 60
           MRSP + RNG    SP  R    H HFHSTV+  KL+RFNSLIL+ RL++F FSLASAVF
Sbjct: 1   MRSPHAFRNG---ESPTLR---DHTHFHSTVTAQKLRRFNSLILLLRLASFSFSLASAVF 60

Query: 61  MLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFPEILQV 120
           MLTNSR   GS SP WYDFDAFR+VF ANAIVA+YS+FEM   VWE SR+ TL+PE  QV
Sbjct: 61  MLTNSR---GSASPHWYDFDAFRFVFVANAIVALYSVFEMGTCVWEFSRETTLWPEAFQV 120

Query: 121 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFAGFLFLGF 180
           WFDFGHDQ F+YLLLSA SA  ALA T+RG DTCTA  AFC+QS ++I LGFA FLFL F
Sbjct: 121 WFDFGHDQVFSYLLLSAGSAAAALARTMRGGDTCTANKAFCLQSDVAIGLGFAAFLFLAF 180

Query: 181 SSLLSGFRVVCFLINGSRFH 201
           SS  SGFRV CFLI GSRFH
Sbjct: 181 SSCFSGFRVACFLITGSRFH 191

[Close]

BLAST of Moc09g33950 vs. ExPASy Swiss-Prot
Match: A9T836 (CASP-like protein 4C3 OS=Physcomitrium patens OX=3218 GN=PHYPADRAFT_192523 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-34
Identity = 81/171 (47.37%), Postives = 100/171 (58.48%), Query Frame = 0


Query: 26  HFHSTVSVHKLKRFNSLILVFRLSTFCFSLASAVFMLTNSRGASGSDSPRWYDFDAFRYV 85
           H++   +  K +R N +IL+FR  TF FSL S + M TN           WYDFD FRYV
Sbjct: 15  HYYGKSTAQKHRRSNGIILIFRALTFSFSLTSVIVMGTNRHRIDAQSRVAWYDFDPFRYV 74

Query: 86  FAANAIVAVYSLFEMVAAVWEISRDDTLFPEILQVWFDFGHDQAFAYLLLSADSAGTALA 145
            A NAI+ +YS  E+  AV+   +D    PE  QVWFD+GHDQ FAYLL SA+SAG A+A
Sbjct: 75  LAVNAIICIYSFVEIWLAVYTYLKDTLFLPETFQVWFDYGHDQGFAYLLFSANSAGIAMA 134

Query: 146 ITLR-------GTDTCTATSAFCIQSTISIALGFAGFLFLGFSSLLSGFRV 190
             L+       G   C+    FC Q+  SI LGF  FLFL  SSLL+G RV
Sbjct: 135 QLLQSGNSLIHGAYRCSDAGVFCTQARASIGLGFGAFLFLALSSLLTGLRV 185

[Close]

BLAST of Moc09g33950 vs. ExPASy TrEMBL
Match: A0A6J1CAY7 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111010005 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 4.7e-106
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MRSPQSLRNGGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCFSLASAVF 60
           MRSPQSLRNGGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCFSLASAVF
Sbjct: 1   MRSPQSLRNGGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCFSLASAVF 60

Query: 61  MLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFPEILQV 120
           MLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFPEILQV
Sbjct: 61  MLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFPEILQV 120

Query: 121 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFAGFLFLGF 180
           WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFAGFLFLGF
Sbjct: 121 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFAGFLFLGF 180

Query: 181 SSLLSGFRVVCFLINGSRFHF 202
           SSLLSGFRVVCFLINGSRFHF
Sbjct: 181 SSLLSGFRVVCFLINGSRFHF 201

[Close]

BLAST of Moc09g33950 vs. ExPASy TrEMBL
Match: A0A0A0KNW2 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G182050 PE=3 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.6e-96
Identity = 187/205 (91.22%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MRSPQSLRN----GGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCFSLA 60
           MRSPQSLRN    GGG+PSPHARIPTPHHHFHSTVSV KLKRFNSLILVFRLSTFCFSLA
Sbjct: 1   MRSPQSLRNGGVGGGGTPSPHARIPTPHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLA 60

Query: 61  SAVFMLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFPE 120
           SAVFM+TNSRG SGSDSPRWYDFDAFRYVFAANAIVAVYSLFEM+A+VWEISR+ TLFPE
Sbjct: 61  SAVFMITNSRG-SGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPE 120

Query: 121 ILQVWFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFAGFL 180
           ILQVWFDFGHDQAFAYLLLSADSAGTALAITL+GTDTC  TSAFC+QSTISIALGFAGFL
Sbjct: 121 ILQVWFDFGHDQAFAYLLLSADSAGTALAITLKGTDTCKVTSAFCVQSTISIALGFAGFL 180

Query: 181 FLGFSSLLSGFRVVCFLINGSRFHF 202
           FLG SSLLSGFRVVCF+INGSRFHF
Sbjct: 181 FLGLSSLLSGFRVVCFVINGSRFHF 204

[Close]

BLAST of Moc09g33950 vs. ExPASy TrEMBL
Match: A0A6J1H0N7 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111458937 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.8e-96
Identity = 185/200 (92.50%), Postives = 192/200 (96.00%), Query Frame = 0


Query: 1   MRSPQSLRNGGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCFSLASAVF 60
           MRSPQSLRNGGG+PSPHARIPTPHHHFHSTVSV KLKRFNSLILVFRLSTFCFSLASAVF
Sbjct: 1   MRSPQSLRNGGGTPSPHARIPTPHHHFHSTVSVQKLKRFNSLILVFRLSTFCFSLASAVF 60

Query: 61  MLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFPEILQV 120
           M+TNSRG SGSDSPRWYDFDAFRYVFAANAIVAVYSLFEM+A+VWEISR+ TLFPEILQV
Sbjct: 61  MITNSRG-SGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTLFPEILQV 120

Query: 121 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFAGFLFLGF 180
           WFDFGHDQAFAYLLLSA SAGTAL ITLR TDTC ATSAFC+QSTISIALGFAGFLFLG 
Sbjct: 121 WFDFGHDQAFAYLLLSAGSAGTALLITLRRTDTCRATSAFCVQSTISIALGFAGFLFLGL 180

Query: 181 SSLLSGFRVVCFLINGSRFH 201
           SSLLSGFRVVCF+INGSRFH
Sbjct: 181 SSLLSGFRVVCFVINGSRFH 199

[Close]

BLAST of Moc09g33950 vs. ExPASy TrEMBL
Match: A0A5D3BVM1 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00170 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.2e-95
Identity = 186/208 (89.42%), Postives = 194/208 (93.27%), Query Frame = 0


Query: 1   MRSPQSLRN-------GGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCF 60
           MRSP SLRN       GGG+PSPHARIPTPHHHFHSTVSV KLKRFNSLILVFRLSTFCF
Sbjct: 1   MRSPHSLRNGGGGGGGGGGTPSPHARIPTPHHHFHSTVSVQKLKRFNSLILVFRLSTFCF 60

Query: 61  SLASAVFMLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTL 120
           SLASAVFM+TNSRG SGSDSPRWYDFDAFRYVFAANAIVAVYSLFEM+A+VWEISR+ TL
Sbjct: 61  SLASAVFMITNSRG-SGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTL 120

Query: 121 FPEILQVWFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFA 180
           FPEILQVWFDFGHDQAFAYLLLSADSAGTALAITL+GTDTC  TSAFC+QSTISIALGFA
Sbjct: 121 FPEILQVWFDFGHDQAFAYLLLSADSAGTALAITLKGTDTCKVTSAFCVQSTISIALGFA 180

Query: 181 GFLFLGFSSLLSGFRVVCFLINGSRFHF 202
           GFLFLG SSLLSGFRVVCF+INGSRFHF
Sbjct: 181 GFLFLGLSSLLSGFRVVCFVINGSRFHF 207

[Close]

BLAST of Moc09g33950 vs. ExPASy TrEMBL
Match: A0A1S3CF55 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500218 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.2e-95
Identity = 186/208 (89.42%), Postives = 194/208 (93.27%), Query Frame = 0


Query: 1   MRSPQSLRN-------GGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCF 60
           MRSP SLRN       GGG+PSPHARIPTPHHHFHSTVSV KLKRFNSLILVFRLSTFCF
Sbjct: 1   MRSPHSLRNGGGGGGGGGGTPSPHARIPTPHHHFHSTVSVQKLKRFNSLILVFRLSTFCF 60

Query: 61  SLASAVFMLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTL 120
           SLASAVFM+TNSRG SGSDSPRWYDFDAFRYVFAANAIVAVYSLFEM+A+VWEISR+ TL
Sbjct: 61  SLASAVFMITNSRG-SGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMIASVWEISREVTL 120

Query: 121 FPEILQVWFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFA 180
           FPEILQVWFDFGHDQAFAYLLLSADSAGTALAITL+GTDTC  TSAFC+QSTISIALGFA
Sbjct: 121 FPEILQVWFDFGHDQAFAYLLLSADSAGTALAITLKGTDTCKVTSAFCVQSTISIALGFA 180

Query: 181 GFLFLGFSSLLSGFRVVCFLINGSRFHF 202
           GFLFLG SSLLSGFRVVCF+INGSRFHF
Sbjct: 181 GFLFLGLSSLLSGFRVVCFVINGSRFHF 207

[Close]

BLAST of Moc09g33950 vs. TAIR 10
Match: AT3G55390.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 256.1 bits (653), Expect = 2.3e-68
Identity = 138/200 (69.00%), Postives = 154/200 (77.00%), Query Frame = 0


Query: 1   MRSPQSLRNGGGSPSPHARIPTPHHHFHSTVSVHKLKRFNSLILVFRLSTFCFSLASAVF 60
           MRSP + RNG    SP  R    H HFHSTV+  KL+RFNSLIL+ RL++F FSLASAVF
Sbjct: 1   MRSPHAFRNG---ESPTLR---DHTHFHSTVTAQKLRRFNSLILLLRLASFSFSLASAVF 60

Query: 61  MLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFPEILQV 120
           MLTNSR   GS SP WYDFDAFR+VF ANAIVA+YS+FEM   VWE SR+ TL+PE  QV
Sbjct: 61  MLTNSR---GSASPHWYDFDAFRFVFVANAIVALYSVFEMGTCVWEFSRETTLWPEAFQV 120

Query: 121 WFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCTATSAFCIQSTISIALGFAGFLFLGF 180
           WFDFGHDQ F+YLLLSA SA  ALA T+RG DTCTA  AFC+QS ++I LGFA FLFL F
Sbjct: 121 WFDFGHDQVFSYLLLSAGSAAAALARTMRGGDTCTANKAFCLQSDVAIGLGFAAFLFLAF 180

Query: 181 SSLLSGFRVVCFLINGSRFH 201
           SS  SGFRV CFLI GSRFH
Sbjct: 181 SSCFSGFRVACFLITGSRFH 191

[Close]

BLAST of Moc09g33950 vs. TAIR 10
Match: AT1G79780.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 58.2 bits (139), Expect = 9.1e-09
Identity = 39/120 (32.50%), Postives = 58/120 (48.33%), Query Frame = 0


Query: 73  SPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDTLFPEILQVWFDFGHDQAFAY 132
           S  W    +++YV  A A   +YSL ++   V+ +     + P   Q W  F  DQ F Y
Sbjct: 61  SSNWSFSPSYQYVVGACAGTVLYSLLQLCLGVYRLVTGSPITPSRFQAWLCFTSDQLFCY 120

Query: 133 LLLSADSAGTALA----ITLRGT---DTCTATSAFCIQSTISIALGFAGFLFLGFSSLLS 186
           L++SA SAG+ +       +R T   D C   S+FC    +S+ L F  F+FL  SS  +
Sbjct: 121 LMMSAGSAGSGVTNLNKTGIRHTPLPDFCKTLSSFCNHVALSLLLVFLSFIFLASSSFFT 180

[Close]

BLAST of Moc09g33950 vs. TAIR 10
Match: AT2G36330.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 53.1 bits (126), Expect = 2.9e-07
Identity = 47/149 (31.54%), Postives = 75/149 (50.34%), Query Frame = 0


Query: 44  LVFRLSTFCFSLAS-AVFMLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVA 103
           L FRLS    +L S ++     ++G SG    R+ +   +R+  + N +  VYS F+   
Sbjct: 137 LGFRLSEVVLALISFSIMAADKTKGWSGDSFDRYKE---YRFCLSVNVVAFVYSSFQACD 196

Query: 104 AVWEISRDDTLFPEILQVWFDFGHDQAFAYLLLSADSAGTALAITLRGTDTCT--ATSAF 163
             + + ++  L    L+  F+F  DQ  AYLL+SA +A    A+T R  D  +      F
Sbjct: 197 LAYHLVKEKHLISHHLRPLFEFIIDQVLAYLLMSASTA----AVT-RVDDWVSNWGKDEF 256

Query: 164 CIQSTISIALGFAGFLFLGFSSLLSGFRV 190
              ++ SIA+ F  FL   FSSL+SG+ +
Sbjct: 257 TEMASASIAMSFLAFLAFAFSSLISGYNL 277

[Close]

BLAST of Moc09g33950 vs. TAIR 10
Match: AT1G17200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 45.4 bits (106), Expect = 6.1e-05
Identity = 45/152 (29.61%), Postives = 75/152 (49.34%), Query Frame = 0


Query: 45  VFRLSTFCFSLASAVFMLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAV 104
           + RL+     +A+ V ML +S   +   S  + +  AFRY+  AN I A YSL  + AA+
Sbjct: 36  MLRLAPVGLCVAALVVMLKDSE-TNEFGSISYSNLTAFRYLVHANGICAGYSL--LSAAI 95

Query: 105 WEISRDDTLFPEILQVWFDFGHDQAFAYLLLSADS-AGTALAITLRG------TDTCTAT 164
             + R  +  P   +VW  F  DQ   YL+L+A + +   L +   G      +D C++ 
Sbjct: 96  AAMPRSSSTMP---RVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSSY 155

Query: 165 SAFCIQSTISIALGFAGFLFLGFSSLLSGFRV 190
             FC ++T S+ + F    F    SL+S +++
Sbjct: 156 GGFCHRATASVIITFFVVCFYIVLSLISSYKL 181

[Close]

BLAST of Moc09g33950 vs. TAIR 10
Match: AT2G38480.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 44.7 bits (104), Expect = 1.0e-04
Identity = 45/138 (32.61%), Postives = 72/138 (52.17%), Query Frame = 0


Query: 53  FSLASAVFMLTNSRGASGSDSPRWYDFDAFRYVFAANAIVAVYSLFEMVAAVWEISRDDT 112
           FSL + + M++N  G   +    + D++ +RYV A + I  +Y+ ++  A     S+ + 
Sbjct: 58  FSLIAFLIMVSNKHGYGRN----FNDYEEYRYVLAISIISTLYTAWQTFA---HFSKRE- 117

Query: 113 LFPEILQVWFDFGHDQAFAYLLLSADSAGTALAITLR-GTDTCTATSAFCIQSTISIALG 172
           +F     +  DF  DQ  AYLL+SA S+   L    R G D     SA    S IS+A+ 
Sbjct: 118 IFDRRTSILVDFSGDQIVAYLLISAASSAIPLTNIFREGQDNIFTDSA---ASAISMAI- 177

Query: 173 FAGFLFLGFSSLLSGFRV 190
           FA F+ L  S+L SG+++
Sbjct: 178 FA-FIALALSALFSGYKL 182

The following BLAST results are available for this feature:

BLAST of Moc09g33950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138955.1	9.8e-106	100.00	CASP-like protein 4C1 [Momordica charantia]	[more]
XP_023524861.1	1.4e-96	93.00	CASP-like protein 4C1 [Cucurbita pepo subsp. pepo] >KAG6600997.1 CASP-like prote...	[more]
XP_004147690.1	5.4e-96	91.22	CASP-like protein 4C1 [Cucumis sativus] >KGN50549.1 hypothetical protein Csa_021...	[more]
XP_038893216.1	7.0e-96	90.78	CASP-like protein 4C1 [Benincasa hispida]	[more]
XP_022957593.1	1.2e-95	92.50	CASP-like protein 4C1 isoform X2 [Cucurbita moschata]	[more]

BLAST of Moc09g33950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9SR15	1.2e-77	79.21	CASP-like protein 4C1 OS=Ricinus communis OX=3988 GN=RCOM_0464280 PE=2 SV=1	[more]
B9HTK2	3.7e-71	73.50	CASP-like protein 4C2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_822486 PE=3 S...	[more]
B9HMF8	4.0e-70	72.00	CASP-like protein 4C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820327 PE=3 S...	[more]
Q9M2U0	3.2e-67	69.00	CASP-like protein 4C1 OS=Arabidopsis thaliana OX=3702 GN=At3g55390 PE=2 SV=1	[more]
A9T836	1.6e-34	47.37	CASP-like protein 4C3 OS=Physcomitrium patens OX=3218 GN=PHYPADRAFT_192523 PE=2 ...	[more]

BLAST of Moc09g33950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CAY7	4.7e-106	100.00	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111010005 PE=3 SV=1	[more]
A0A0A0KNW2	2.6e-96	91.22	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G182050 PE=3 SV=1	[more]
A0A6J1H0N7	5.8e-96	92.50	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111458937 PE=3 SV=1	[more]
A0A5D3BVM1	2.2e-95	89.42	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00...	[more]
A0A1S3CF55	2.2e-95	89.42	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500218 PE=3 SV=1	[more]

BLAST of Moc09g33950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55390.1	2.3e-68	69.00	Uncharacterised protein family (UPF0497)	[more]
AT1G79780.1	9.1e-09	32.50	Uncharacterised protein family (UPF0497)	[more]
AT2G36330.1	2.9e-07	31.54	Uncharacterised protein family (UPF0497)	[more]
AT1G17200.1	6.1e-05	29.61	Uncharacterised protein family (UPF0497)	[more]
AT2G38480.1	1.0e-04	32.61	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 40..177 e-value: 1.5E-29 score: 102.7
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 44..186 e-value: 2.3E-12 score: 45.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR11615:SF236	CASP-LIKE PROTEIN 4C1	coord: 1..201
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 1..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g33950.1	Moc09g33950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding