Moc09g33540 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g33540
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	17.3 kDa class I heat shock protein-like
Location	chr9: 25482926 .. 25485384 (-)
RNA-Seq Expression	Moc09g33540
Synteny	Moc09g33540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGCTGATTCCAAGCATTTTCGGTGGCCGCCGCAGCAACATCTTCGACCCCTTCTCACTGGATGTATGGGATCCGTTCGATGGGTTCCCATTTTCCAATTCCACCGCATTGGCCAACGCCCATTCCTCCGCTTCGGAAACCTCTGCTTTTGCCAACACTCGAATCGACTGGAAGGAGACCCCACAAGCCCACGTCTTCAAGGCCGATCTTCCAGGGATCAAAAAGGAGGAAGTGAAAGTGGAGGCTGAAGAAGGAAGAGTTCTGCAGATCAGTGGGGAGAGAAGGAAAGAGCAGGAGGAGAAGAACGACAAGTGGCACAGAATCGAGCGGAGCAGTGGAAAGTTCATGAGGAGATTCAGGCTGCCGGAGAATGCCAAAGTTGAGGAGGTGAAGGCCAGCATGGAGAATGGAGTTCTGACTGTGACAGTGCCCAAAATGGAAGAGAAGAAGCCTGAAATCAAGCCCATTGACATCTCTGGTTAGATAAAATCTTCTTGGTTCTCTTGTAGTTGTCCCATTTGGGTTTATCTTGAGGTGCAAATGTATTTTGTTGATGTGTGTTGCAAATGTAACTTTTGAAAGGTGAAAGAGTTTGGCTCTGTACTTGTGTGTATTGTATGATATTACTGTTGGGATGAATATAACGTTGTCAGTTTTGACTTTGGTAGAGCTGTTTGGGTTAAAAATCTCTCTCCATTTCCCATATTTTCTCTCTTTTTTTTTCTTTAAAATTTTGATAACGGGATAGGATACTTACGCAGGCATTAAATTATTTTAAATTCTAGAATTTTTAAAAATAAAAATGATATGAAATTCTTATAAATTTTAATAGATTTCAGGGTGCATCTCCAAAAACTGAGAACGGATATTTATAAGGTAAGAGCTTTTACATAGCAGTGTGACATGAATAATAGTTCTGCTGCCTTCCATCAAACCTGGCTTCCTACCTTCCATTACGAAGGAAAATGAAACAAGGTAAGGGAGAAAGAAGTTGTCCTTCTATGGTAACCTGCTCCGTCAGTTAATCGAAGTGCTGTGCTCGCTAGTGCATAGGTAGAAAACGGAGTGGGGAAGGAAGAAAAATTATTTGATTTTGGCGCATGAGATGGCAGGTTTAGCTAGAGGCAACATCGTATCCGACTCCAAATCCTCGAAACTCTCCATTGGAAATTCAAAGGCAATATTCTTGAACTTCCAAAAACCAAAACCAAAGAAATACAGATTTGGAACTCTCAGTTGGAAATTCAAAGGCAAATTTTTGAACTTCCAAAAACCTGCAAGATGTATGAGAAAGAAGGTTTTTTACGTAACGCTTCAATAGAAAGAATACACTCCATGATCGATCAAACAATCAAAAGATGTTCAAAAGAAAAAAAATCTCTATTTGATAGAATTTCTTCCTATACCTATCAATAGGTTCATTATTTCACTCATGTATCTTCCAAAAGGGGACTCACTAGGTCAGAGTTCAAAGACCCTAATTTATATAGGCTTCCTATACACTTATTTTTTTTCATATAAAAAAAGAAACTAAAGCTTGACTCCTCCTTTGGTTCTATTTAGGGAAAGAACTTTTCCTTTACTCTCTTTAACGCGATATTTTGAATCTCGTGAAATGGTAAACTGTCGAGGCATCTTGAAAGTGAATCATATTCCATGAATATGATATTCAAAAACAAAATGAAGTTTTTGATTGAGGGATTGATGTTTAAGATTTTTTGCTAGAGCTATGATTTTCAACTGGAATGGAGAAGTCAGAGTCGATAAAAGGACTCGCAAGTAAGTGAAAAGCGTGGCAATAGAGCGAGTTCCACTCAAGATATTTTTTATTTAACAATTTTCCTTCTGTTTCTCTACATTTTTCTCTCTAACTATAACAACAATTTATGGAGAAACTGTGACACTCGACTACAGACTACAGATGAGGGTACATGAATGAACCGATACCACATCTGAATGAGAGAGATCCTGAAATCATGGAATAATGATCAATAAAGGTTTAAAAAGAATTGATAGTCACTACCTATACCAACAAGGCACGCATTCTTTTTCGGTGGCTGAATCATATAAGAACTCAAATATTAAACGTGCTTGATTTGAAGCAATCTTCAACTGGTGGAACTCCTAGTCTCTTTGAGGACAAAGCAGGTGGCGCAGTCGGATCGCAGGAGAATGTTGGGACGATTAGGGCCAACAAAGCATGCTGAAAGAATTTAACTTGTTGTATATCATGGAGATACAAAAGATATTCTGTAAAACTTACAAAAACTTGAAGGTTTTCAATTTGCATACAACAATGTTGTCAATTTACATCCAACGATTAAATATCATTTAAAATTGTTTTCTTGTAGTAGTTTAACTAATTCCATTCCTTCTCGTGCGAAATTTGCCATTCTCTGCCACATTTCTTCCTCTGCTCCTGAAACAACCTTCTAGCCCCATCTTCAAATTTCTGA

mRNA sequence

ATGTCGCTGATTCCAAGCATTTTCGGTGGCCGCCGCAGCAACATCTTCGACCCCTTCTCACTGGATGTATGGGATCCGTTCGATGGGTTCCCATTTTCCAATTCCACCGCATTGGCCAACGCCCATTCCTCCGCTTCGGAAACCTCTGCTTTTGCCAACACTCGAATCGACTGGAAGGAGACCCCACAAGCCCACGTCTTCAAGGCCGATCTTCCAGGGATCAAAAAGGAGGAAGTGAAAGTGGAGGCTGAAGAAGGAAGAGTTCTGCAGATCAGTGGGGAGAGAAGGAAAGAGCAGGAGGAGAAGAACGACAAGTGGCACAGAATCGAGCGGAGCAGTGGAAAGTTCATGAGGAGATTCAGGCTGCCGGAGAATGCCAAAGTTGAGGAGGTGAAGGCCAGCATGGAGAATGGAGTTCTGACTGTGACAGTGCCCAAAATGGAAGAGAAGAAGCCTGAAATCAAGCCCATTGACATCTCTGCCCCATCTTCAAATTTCTGA

Coding sequence (CDS)

ATGTCGCTGATTCCAAGCATTTTCGGTGGCCGCCGCAGCAACATCTTCGACCCCTTCTCACTGGATGTATGGGATCCGTTCGATGGGTTCCCATTTTCCAATTCCACCGCATTGGCCAACGCCCATTCCTCCGCTTCGGAAACCTCTGCTTTTGCCAACACTCGAATCGACTGGAAGGAGACCCCACAAGCCCACGTCTTCAAGGCCGATCTTCCAGGGATCAAAAAGGAGGAAGTGAAAGTGGAGGCTGAAGAAGGAAGAGTTCTGCAGATCAGTGGGGAGAGAAGGAAAGAGCAGGAGGAGAAGAACGACAAGTGGCACAGAATCGAGCGGAGCAGTGGAAAGTTCATGAGGAGATTCAGGCTGCCGGAGAATGCCAAAGTTGAGGAGGTGAAGGCCAGCATGGAGAATGGAGTTCTGACTGTGACAGTGCCCAAAATGGAAGAGAAGAAGCCTGAAATCAAGCCCATTGACATCTCTGCCCCATCTTCAAATTTCTGA

Protein sequence

MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKETPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRFRLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDISAPSSNF

Homology

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BLAST of Moc09g33540 vs. NCBI nr
Match: XP_022138990.1 (17.8 kDa class I heat shock protein-like isoform X1 [Momordica charantia] >XP_022138991.1 17.8 kDa class I heat shock protein-like isoform X2 [Momordica charantia])

HSP 1 Score: 302.4 bits (773), Expect = 2.5e-78
Identity = 155/160 (96.88%), Postives = 156/160 (97.50%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKE 60
           MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSN TALANAHSSASETSAFANTRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNCTALANAHSSASETSAFANTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRF 120
           TPQAHVFKADLPGIKKEEVKVE EEGRVLQISGER +EQEEKNDKWHRIERSSGKFMRRF
Sbjct: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSREQEEKNDKWHRIERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIK IDIS
Sbjct: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDIS 160

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BLAST of Moc09g33540 vs. NCBI nr
Match: XP_022139109.1 (18.1 kDa class I heat shock protein-like [Momordica charantia] >XP_022159337.1 18.1 kDa class I heat shock protein-like [Momordica charantia])

HSP 1 Score: 298.9 bits (764), Expect = 2.7e-77
Identity = 154/160 (96.25%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKE 60
           MSLIPSIFGGRRSNIFDPFSLDVWDP DGFPFSNSTALANA SSASETSAFANTRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPLDGFPFSNSTALANAPSSASETSAFANTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRF 120
           TPQAH+FKADLPGIKKEEVKVE EEGRVLQISGER KEQEEKNDKWHRIERSSGKFMRRF
Sbjct: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIK IDIS
Sbjct: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDIS 160

[Close]

BLAST of Moc09g33540 vs. NCBI nr
Match: XP_022138993.1 (17.3 kDa class I heat shock protein-like [Momordica charantia])

HSP 1 Score: 297.7 bits (761), Expect = 6.0e-77
Identity = 152/160 (95.00%), Postives = 156/160 (97.50%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKE 60
           MSLIPSIFGGRRSNIFDPFSLDVWDPF+GFPF NSTALANAHSSASETSAFA+TRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AHVFKADLPGIKKEEVKVE EEGRVLQISGER +EQEEKNDKWHRIERSSGKFMRRF
Sbjct: 61  TPEAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSREQEEKNDKWHRIERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIK IDIS
Sbjct: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDIS 160

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BLAST of Moc09g33540 vs. NCBI nr
Match: XP_004150235.2 (18.1 kDa class I heat shock protein [Cucumis sativus] >KGN50620.1 hypothetical protein Csa_021481 [Cucumis sativus])

HSP 1 Score: 281.6 bits (719), Expect = 4.5e-72
Identity = 144/160 (90.00%), Postives = 151/160 (94.38%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKE 60
           M+L+PSIFGGRRSN+FDPFSLD+WDPF+GFPFSNS  LANA SSA ETSAFANTRIDWKE
Sbjct: 1   MALVPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNS--LANAPSSARETSAFANTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRF 120
           TPQAH+FKADLPGIKKEEVKVE EEGRVLQISGER KEQEEKNDKWHRIERS GKFMRRF
Sbjct: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSCGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           RLPENAKVEEVKASMENGVLTV VPKMEEKKPEIK IDI+
Sbjct: 121 RLPENAKVEEVKASMENGVLTVMVPKMEEKKPEIKSIDIA 158

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BLAST of Moc09g33540 vs. NCBI nr
Match: XP_008465538.1 (PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo] >KAA0051493.1 17.6 kDa class I heat shock protein 3-like [Cucumis melo var. makuwa] >TYK22768.1 17.6 kDa class I heat shock protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 281.2 bits (718), Expect = 5.9e-72
Identity = 144/160 (90.00%), Postives = 151/160 (94.38%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKE 60
           MSLIPSIFGGRRSN+FDPFSLD+WDPF+GFPFSNS  LAN  SSA ETSAFANTRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNS--LANVPSSAVETSAFANTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRF 120
           TPQAH+FKADLPGIKKEEVKVE EEGRVLQISGER KEQEEKNDKWHR+ERSSGKF RRF
Sbjct: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           RLPENAKVEEVKA+MENGVLTVTVPK+EEKKPEIK IDIS
Sbjct: 121 RLPENAKVEEVKANMENGVLTVTVPKVEEKKPEIKSIDIS 158

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BLAST of Moc09g33540 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 3.6e-64
Identity = 125/160 (78.12%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKE 60
           MSLIPSIFGGRRSN+FDPFS D+WDPF+GF F+ S+ALANA S+A + +AF N R+DWKE
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGF-FTPSSALANA-STARDVAAFTNARVDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AHVFKADLPG+KKEEVKVE E+  VLQISGER KE EEKNDKWHR+ER+SGKFMRRF
Sbjct: 61  TPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           RLPENAK+EEVKA+MENGVLTV VPK  EKKP++K IDIS
Sbjct: 121 RLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDIS 158

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BLAST of Moc09g33540 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 6.1e-64
Identity = 124/160 (77.50%), Postives = 138/160 (86.25%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKE 60
           MS+IPS FGGRRSN+FDPFSLDVWDPF  FP   S    +A     ET+AF NT IDWKE
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTS----SASEFGKETAAFVNTHIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRF 120
           TPQAHVFKADLPG+KKEEVKVE EEG+VLQISGER KE+EEKNDKWHR+ERSSGKF+RRF
Sbjct: 61  TPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           RLPENAKV+EVKA+M NGV+TVTVPK+E KKPE+K IDIS
Sbjct: 121 RLPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDIS 156

[Close]

BLAST of Moc09g33540 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 5.2e-63
Identity = 123/160 (76.88%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKE 60
           MSLIPS FGGRRSN+FDPFSLDVWDPF  FPF+NS   A   S   E SAF +TR+DWKE
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSA---SFPRENSAFVSTRVDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AHVFKADLPG+KKEEVKVE E+ RVLQISGER  E+E+KND+WHR+ERSSGKFMRRF
Sbjct: 61  TPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           RLPENAK+++VKA+MENGVLTVTVPK E KKPE+K IDIS
Sbjct: 121 RLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDIS 157

[Close]

BLAST of Moc09g33540 vs. ExPASy Swiss-Prot
Match: P05478 (18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.6e-62
Identity = 117/160 (73.12%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKE 60
           MSLIP+ FGGRR+N+FDPFSLDVWDPF  FPF N+ + A+    + E SAF +TR+DWKE
Sbjct: 1   MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AHVFKAD+PG+KKEEVKV+ E+ +VLQISGER  E+E+KND WHR+ERSSGKFMRRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           RLPENAKVE+VKASMENGVLTVTVPK E KKP++K I+IS
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEIS 160

[Close]

BLAST of Moc09g33540 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 234.6 bits (597), Expect = 8.2e-61
Identity = 118/160 (73.75%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKE 60
           MSLIPSIFGGRR+N+FDPFSLDV+DPF+G  F   + LANA   A + +AF N ++DW+E
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEG--FLTPSGLANA--PAMDVAAFTNAKVDWRE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AHVFKADLPG++KEEVKVE E+G +LQISGER  E EEKNDKWHR+ERSSGKF RRF
Sbjct: 61  TPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           RLPENAK+EE+KASMENGVL+VTVPK+ EKKPE+K IDIS
Sbjct: 121 RLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDIS 156

[Close]

BLAST of Moc09g33540 vs. ExPASy TrEMBL
Match: A0A6J1CB17 (17.8 kDa class I heat shock protein-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010034 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.2e-78
Identity = 155/160 (96.88%), Postives = 156/160 (97.50%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKE 60
           MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSN TALANAHSSASETSAFANTRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNCTALANAHSSASETSAFANTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRF 120
           TPQAHVFKADLPGIKKEEVKVE EEGRVLQISGER +EQEEKNDKWHRIERSSGKFMRRF
Sbjct: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSREQEEKNDKWHRIERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIK IDIS
Sbjct: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDIS 160

[Close]

BLAST of Moc09g33540 vs. ExPASy TrEMBL
Match: A0A6J1CC00 (18.1 kDa class I heat shock protein-like OS=Momordica charantia OX=3673 GN=LOC111010100 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.3e-77
Identity = 154/160 (96.25%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKE 60
           MSLIPSIFGGRRSNIFDPFSLDVWDP DGFPFSNSTALANA SSASETSAFANTRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPLDGFPFSNSTALANAPSSASETSAFANTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRF 120
           TPQAH+FKADLPGIKKEEVKVE EEGRVLQISGER KEQEEKNDKWHRIERSSGKFMRRF
Sbjct: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIK IDIS
Sbjct: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDIS 160

[Close]

BLAST of Moc09g33540 vs. ExPASy TrEMBL
Match: A0A6J1CEM2 (17.3 kDa class I heat shock protein-like OS=Momordica charantia OX=3673 GN=LOC111010035 PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.9e-77
Identity = 152/160 (95.00%), Postives = 156/160 (97.50%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKE 60
           MSLIPSIFGGRRSNIFDPFSLDVWDPF+GFPF NSTALANAHSSASETSAFA+TRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AHVFKADLPGIKKEEVKVE EEGRVLQISGER +EQEEKNDKWHRIERSSGKFMRRF
Sbjct: 61  TPEAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSREQEEKNDKWHRIERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIK IDIS
Sbjct: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDIS 160

[Close]

BLAST of Moc09g33540 vs. ExPASy TrEMBL
Match: A0A0A0KLU0 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G197620 PE=3 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.2e-72
Identity = 144/160 (90.00%), Postives = 151/160 (94.38%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKE 60
           M+L+PSIFGGRRSN+FDPFSLD+WDPF+GFPFSNS  LANA SSA ETSAFANTRIDWKE
Sbjct: 1   MALVPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNS--LANAPSSARETSAFANTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRF 120
           TPQAH+FKADLPGIKKEEVKVE EEGRVLQISGER KEQEEKNDKWHRIERS GKFMRRF
Sbjct: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSCGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           RLPENAKVEEVKASMENGVLTV VPKMEEKKPEIK IDI+
Sbjct: 121 RLPENAKVEEVKASMENGVLTVMVPKMEEKKPEIKSIDIA 158

[Close]

BLAST of Moc09g33540 vs. ExPASy TrEMBL
Match: A0A5D3DH18 (17.6 kDa class I heat shock protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75208G00010 PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.8e-72
Identity = 144/160 (90.00%), Postives = 151/160 (94.38%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKE 60
           MSLIPSIFGGRRSN+FDPFSLD+WDPF+GFPFSNS  LAN  SSA ETSAFANTRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNS--LANVPSSAVETSAFANTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRF 120
           TPQAH+FKADLPGIKKEEVKVE EEGRVLQISGER KEQEEKNDKWHR+ERSSGKF RRF
Sbjct: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           RLPENAKVEEVKA+MENGVLTVTVPK+EEKKPEIK IDIS
Sbjct: 121 RLPENAKVEEVKANMENGVLTVTVPKVEEKKPEIKSIDIS 158

[Close]

BLAST of Moc09g33540 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 245.7 bits (626), Expect = 2.5e-65
Identity = 125/160 (78.12%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKE 60
           MSLIPSIFGGRRSN+FDPFS D+WDPF+GF F+ S+ALANA S+A + +AF N R+DWKE
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGF-FTPSSALANA-STARDVAAFTNARVDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AHVFKADLPG+KKEEVKVE E+  VLQISGER KE EEKNDKWHR+ER+SGKFMRRF
Sbjct: 61  TPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           RLPENAK+EEVKA+MENGVLTV VPK  EKKP++K IDIS
Sbjct: 121 RLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDIS 158

[Close]

BLAST of Moc09g33540 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 234.6 bits (597), Expect = 5.9e-62
Identity = 118/160 (73.75%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKE 60
           MSLIPSIFGGRR+N+FDPFSLDV+DPF+G  F   + LANA   A + +AF N ++DW+E
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEG--FLTPSGLANA--PAMDVAAFTNAKVDWRE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AHVFKADLPG++KEEVKVE E+G +LQISGER  E EEKNDKWHR+ERSSGKF RRF
Sbjct: 61  TPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           RLPENAK+EE+KASMENGVL+VTVPK+ EKKPE+K IDIS
Sbjct: 121 RLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDIS 156

[Close]

BLAST of Moc09g33540 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 233.4 bits (594), Expect = 1.3e-61
Identity = 115/160 (71.88%), Postives = 137/160 (85.62%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWKE 60
           MSL+PS FGGRR+N+FDPFSLDVWDPF+GF    +  L NA   A + +AF N ++DW+E
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF---LTPGLTNA--PAKDVAAFTNAKVDWRE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AHVFKAD+PG+KKEEVKVE E+G +LQISGER  E EEK+D WHR+ERSSGKFMRRF
Sbjct: 61  TPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           RLPENAKVEEVKASMENGVL+VTVPK++E KPE+K +DIS
Sbjct: 121 RLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDIS 155

[Close]

BLAST of Moc09g33540 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 201.8 bits (512), Expect = 4.2e-52
Identity = 107/161 (66.46%), Postives = 124/161 (77.02%), Query Frame = 0


Query: 1   MSLIPSIF-GGRRSNIFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDWK 60
           MS+IPS F   RRSNIFDPFSLDVWDPF     S         S + E SA  N R+DW+
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSS---------SLSRENSAIVNARVDWR 60

Query: 61  ETPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMRR 120
           ETP+AHVFKADLPG+KKEEVKVE EE  VL+ISGER  E+E+KND WHR+ERSSG+F RR
Sbjct: 61  ETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRR 120

Query: 121 FRLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKPIDIS 161
           FRLPEN K+++VKA+MENGVLTVTVPK E KK ++K I IS
Sbjct: 121 FRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQIS 152

[Close]

BLAST of Moc09g33540 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 199.5 bits (506), Expect = 2.1e-51
Identity = 110/164 (67.07%), Postives = 128/164 (78.05%), Query Frame = 0


Query: 1   MSLIPSIFG-GRRSN-IFDPFSLDVWDPFDGFPFSNSTALANAHSSASETSAFANTRIDW 60
           MSLIPS FG  RRSN IFDPFSLDVWDPF    F +S         + ETSA  N R+DW
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSL--------SGETSAITNARVDW 60

Query: 61  KETPQAHVFKADLPGIKKEEVKVEAEEGRVLQISGERRKEQEEKNDKWHRIERSSGKFMR 120
           KET +AHVFKADLPG+KKEEVKVE E+  VL+ISGER  E+EEK D WHR+ERSSG+F R
Sbjct: 61  KETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSR 120

Query: 121 RFRLPENAKVEEVKASMENGVLTVTVPKMEE--KKPEIKPIDIS 161
           +F+LPEN K+++VKASMENGVLTVTVPK+EE  KK ++K IDIS
Sbjct: 121 KFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDIS 156

The following BLAST results are available for this feature:

BLAST of Moc09g33540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138990.1	2.5e-78	96.88	17.8 kDa class I heat shock protein-like isoform X1 [Momordica charantia] >XP_02...	[more]
XP_022139109.1	2.7e-77	96.25	18.1 kDa class I heat shock protein-like [Momordica charantia] >XP_022159337.1 1...	[more]
XP_022138993.1	6.0e-77	95.00	17.3 kDa class I heat shock protein-like [Momordica charantia]	[more]
XP_004150235.2	4.5e-72	90.00	18.1 kDa class I heat shock protein [Cucumis sativus] >KGN50620.1 hypothetical p...	[more]
XP_008465538.1	5.9e-72	90.00	PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo] >KAA0051493...	[more]

BLAST of Moc09g33540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19037	3.6e-64	78.13	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P27396	6.1e-64	77.50	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P27880	5.2e-63	76.88	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
P05478	2.6e-62	73.13	18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=...	[more]
P13853	8.2e-61	73.75	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]

BLAST of Moc09g33540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CB17	1.2e-78	96.88	17.8 kDa class I heat shock protein-like isoform X1 OS=Momordica charantia OX=36...	[more]
A0A6J1CC00	1.3e-77	96.25	18.1 kDa class I heat shock protein-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1CEM2	2.9e-77	95.00	17.3 kDa class I heat shock protein-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A0A0KLU0	2.2e-72	90.00	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G197620 PE=3 S...	[more]
A0A5D3DH18	2.8e-72	90.00	17.6 kDa class I heat shock protein 3-like OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of Moc09g33540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	2.5e-65	78.13	heat shock protein 18.2	[more]
AT1G53540.1	5.9e-62	73.75	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	1.3e-61	71.88	heat shock protein 17.4	[more]
AT2G29500.1	4.2e-52	66.46	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	2.1e-51	67.07	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 57..160 e-value: 9.6E-31 score: 106.0
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 47..162 score: 31.699987
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 9..161 e-value: 3.7E-52 score: 178.0
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 25..160
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..160
None	No IPR available	PANTHER	PTHR11527:SF325	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..160
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 55..146 e-value: 2.40309E-50 score: 154.77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g33540.1	Moc09g33540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding