Moc09g32200 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g32200
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr9: 24355412 .. 24355789 (+)
RNA-Seq Expression	Moc09g32200
Synteny	Moc09g32200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACGAGAAAGGAGTCTACGACGCTCTGATGATAACTGCTCTGCCAAGAGGAGGCTGAACTTGGACGACCCCCAGGTTGGAGGACCCGAGGATGGGACCAGCCAGTCAAACCCGGAACGTCAGGAGGGGTTGCTCGAGGCGCATGCACTAACGACCCTTGAGCCACTCCAAAAGCAGTTCGCGGTCTTGGAAGACAAGGTAGAGGGCATGCTGCAACGCATGACCCAAGTCCTTCGACAATTCAAGCGACAAGAGTTCGACGAGGTACCCCTTGTCAGAGACCTGAGAAAGGGGAGGGGCCCAGCGCAAAGCGAGACCGAGGAATCAACAAACAGTGCAGGGGTCGTCCAAGTTCAGCCTAAAACAATCAACTAA

mRNA sequence

ATGACACGAGAAAGGAGTCTACGACGCTCTGATGATAACTGCTCTGCCAAGAGGAGGCTGAACTTGGACGACCCCCAGGTTGGAGGACCCGAGGATGGGACCAGCCAGTCAAACCCGGAACGTCAGGAGGGGTTGCTCGAGGCGCATGCACTAACGACCCTTGAGCCACTCCAAAAGCAGTTCGCGGTCTTGGAAGACAAGGTAGAGGGCATGCTGCAACGCATGACCCAAGTCCTTCGACAATTCAAGCGACAAGAGTTCGACGAGGTACCCCTTGTCAGAGACCTGAGAAAGGGGAGGGGCCCAGCGCAAAGCGAGACCGAGGAATCAACAAACAGTGCAGGGGTCGTCCAAGTTCAGCCTAAAACAATCAACTAA

Coding sequence (CDS)

ATGACACGAGAAAGGAGTCTACGACGCTCTGATGATAACTGCTCTGCCAAGAGGAGGCTGAACTTGGACGACCCCCAGGTTGGAGGACCCGAGGATGGGACCAGCCAGTCAAACCCGGAACGTCAGGAGGGGTTGCTCGAGGCGCATGCACTAACGACCCTTGAGCCACTCCAAAAGCAGTTCGCGGTCTTGGAAGACAAGGTAGAGGGCATGCTGCAACGCATGACCCAAGTCCTTCGACAATTCAAGCGACAAGAGTTCGACGAGGTACCCCTTGTCAGAGACCTGAGAAAGGGGAGGGGCCCAGCGCAAAGCGAGACCGAGGAATCAACAAACAGTGCAGGGGTCGTCCAAGTTCAGCCTAAAACAATCAACTAA

Protein sequence

MTRERSLRRSDDNCSAKRRLNLDDPQVGGPEDGTSQSNPERQEGLLEAHALTTLEPLQKQFAVLEDKVEGMLQRMTQVLRQFKRQEFDEVPLVRDLRKGRGPAQSETEESTNSAGVVQVQPKTIN

Homology

[Close]

BLAST of Moc09g32200 vs. NCBI nr
Match: XP_022145129.1 (uncharacterized protein LOC111014646 [Momordica charantia])

HSP 1 Score: 195.3 bits (495), Expect = 3.2e-46
Identity = 104/115 (90.43%), Postives = 107/115 (93.04%), Query Frame = 0


Query: 1   MTRERSLRRSDDNCSAKRRLNLDDPQVGGPEDGTSQSNPERQEGLLEAHALTTLEPLQKQ 60
           MT ERS RRSDDNCSAKRRLNLDDPQVGGPEDGTSQ N ERQEGL EAHALTT EPLQKQ
Sbjct: 1   MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQ 60

Query: 61  FAVLEDKVEGMLQRMTQVLRQFKRQEFDEVPLVRDLRKGRGPAQSETEESTNSAG 116
           FAVLEDKVEGMLQRMTQVLRQ++RQE DEVPLVRD RKG+GPAQSETEESTNSAG
Sbjct: 61  FAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAG 115

[Close]

BLAST of Moc09g32200 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 137.9 bits (346), Expect = 6.0e-29
Identity = 78/115 (67.83%), Postives = 83/115 (72.17%), Query Frame = 0


Query: 1   MTRERSLRRSDDNCSAKRRLNLDDPQVGGPEDGTSQSNPERQEGLLEAHALTTLEPLQKQ 60
           MT ERS RRSDD+CSAKRRLNL DPQVGGPEDGTSQ N ERQEGL E  ALTT EP QKQ
Sbjct: 1   MTPERSPRRSDDDCSAKRRLNLGDPQVGGPEDGTSQPNQERQEGLXEXXALTTPEPFQKQ 60

Query: 61  FAVLEDKVEGMLQRMTQVLRQFKRQEFDEVPLVRDLRKGRGPAQSETEESTNSAG 116
           FAVLEDK                  E DEVPLVRD +KG+GP +S+TEESTNS G
Sbjct: 61  FAVLEDK------------------ESDEVPLVRDPKKGKGPTESDTEESTNSVG 97

[Close]

BLAST of Moc09g32200 vs. ExPASy TrEMBL
Match: A0A6J1CUA7 (uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014646 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.5e-46
Identity = 104/115 (90.43%), Postives = 107/115 (93.04%), Query Frame = 0


Query: 1   MTRERSLRRSDDNCSAKRRLNLDDPQVGGPEDGTSQSNPERQEGLLEAHALTTLEPLQKQ 60
           MT ERS RRSDDNCSAKRRLNLDDPQVGGPEDGTSQ N ERQEGL EAHALTT EPLQKQ
Sbjct: 1   MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQ 60

Query: 61  FAVLEDKVEGMLQRMTQVLRQFKRQEFDEVPLVRDLRKGRGPAQSETEESTNSAG 116
           FAVLEDKVEGMLQRMTQVLRQ++RQE DEVPLVRD RKG+GPAQSETEESTNSAG
Sbjct: 61  FAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAG 115

[Close]

BLAST of Moc09g32200 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.9e-29
Identity = 78/115 (67.83%), Postives = 83/115 (72.17%), Query Frame = 0


Query: 1   MTRERSLRRSDDNCSAKRRLNLDDPQVGGPEDGTSQSNPERQEGLLEAHALTTLEPLQKQ 60
           MT ERS RRSDD+CSAKRRLNL DPQVGGPEDGTSQ N ERQEGL E  ALTT EP QKQ
Sbjct: 1   MTPERSPRRSDDDCSAKRRLNLGDPQVGGPEDGTSQPNQERQEGLXEXXALTTPEPFQKQ 60

Query: 61  FAVLEDKVEGMLQRMTQVLRQFKRQEFDEVPLVRDLRKGRGPAQSETEESTNSAG 116
           FAVLEDK                  E DEVPLVRD +KG+GP +S+TEESTNS G
Sbjct: 61  FAVLEDK------------------ESDEVPLVRDPKKGKGPTESDTEESTNSVG 97

The following BLAST results are available for this feature:

BLAST of Moc09g32200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145129.1	3.2e-46	90.43	uncharacterized protein LOC111014646 [Momordica charantia]	[more]
XP_022158830.1	6.0e-29	67.83	uncharacterized protein LOC111025293 [Momordica charantia]	[more]

BLAST of Moc09g32200 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc09g32200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CUA7	1.5e-46	90.43	uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1DWY0	2.9e-29	67.83	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Moc09g32200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g32200.1	Moc09g32200.1	mRNA