Moc09g32130 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g32130
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	40S ribosomal protein S26
Location	chr9: 24306995 .. 24308360 (+)
RNA-Seq Expression	Moc09g32130
Synteny	Moc09g32130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGTCGGCCACTCCGCCTCACGATGACGTTGCGACAGTAAAAAATGAATTATATTAATATTATGTCGACAATAATGATATTTTATTGATATTTTTCATATGTTGACATTCTTTTTCCAATACCGTGGAAACGAAATCTCGACAGAAATGTCATTTGGTGTTTAATACCCTGCTACATATTTAATTTAGAAATACTTATAAAAGTGATTTGGTTTCTTTGGAGAGTGTTAATTTTAACCATGCAATTCCGAACAGCATTCCTAAACTCACTATTAGTCTTGGATAAAGAGAAATTTGAGTGTCAATCGTGAGACAGAGGAGCTCAGTTTTATTTGAGCGAAAATTTGGGAGAGAATTAAATCTAACTTCATGAGTTTTGATTGACGGGAATAGGACAAGGCCATTAAGAGGTTTTTGGTAAGGAACATTGTGGAGCAGGCTGCTGTTAGGGATGTCCAAGAAGCCTGTGTCTATGATCGTAAGTTATTATCTCCACCCCGGCTAGTCTCGTGGTTGCTTGATTTCATGTATCAAAGATGTTTTTGTTCACTGTCTGATATAGATTTTTGTTTTCTGTATAGAATATACTCTCCCTAAGCTTTATGCTAAGATGCAGTACTGTGTTTCCTGTGCCATTCACTCACATGTTGTGAGAGTTCGTTCTCGTACGGATAGAAGAAATCGGCAACCACCACAGCGCTTCATTAGACGCAGGGTTGGCCTCTTTACATAACATCTATAGCTTTGATTCATAATGGAGTAATCGTATTTATAATGCATCATAATGTGTCTATCCTTATTTACTACTTAATTGTTTATCCACTTTTGATGAGCTCAAAATTTTAGGATGAGTTTGCTGTTAGAGTATTTGTATGATTATATACGGAGACTTGAAGGATACTTTTGCATTAAATACTTATTATATACTACGTATCAAGAAAATTATCCATCAGACATCATTTGGTTCAAATGGTTCCCCTACATTTCTTTCAGTTTGATATGTTAAAGCTCCTACTGATCTGGATTATGTACAAATTTGATTCGAATAACGATACCAACTATTTGGAGAACCATTGATGCTCATGTAGAAGATTAACATTACTTAGTGCATCTAAACTATGCTCATTATTGTTCATTGGCTCATTTATTTGTGCTTAAGCCTGTTTACTTACAAGTAGAGATATACTTGTTACATATTAATGATATTATTTTGAGTCTAAAATTTTATTCAACAGTGCTCTGGAATAGCCTATGATTCTTGTTACATTATTTCGTGTTTGTTTGTTCAGGAGGATCAGCCAAAGCCTGGCCAGCCTGGTCAAACACCTCGTCCTGTTGGAGCCGGAAATCTTGCTCGTGTATGA

mRNA sequence

ATGACGTCGGCCACTCCGCCTCACGATGACGTTGCGACAGACAAGGCCATTAAGAGGTTTTTGGTAAGGAACATTGTGGAGCAGGCTGCTGTTAGGGATGTCCAAGAAGCCTGTGTCTATGATCAATATACTCTCCCTAAGCTTTATGCTAAGATGCAGTACTGTGTTTCCTGTGCCATTCACTCACATGTTGTGAGAGTTCGTTCTCGTACGGATAGAAGAAATCGGCAACCACCACAGCGCTTCATTAGACGCAGGGAGGATCAGCCAAAGCCTGGCCAGCCTGGTCAAACACCTCGTCCTGTTGGAGCCGGAAATCTTGCTCGTGTATGA

Coding sequence (CDS)

ATGACGTCGGCCACTCCGCCTCACGATGACGTTGCGACAGACAAGGCCATTAAGAGGTTTTTGGTAAGGAACATTGTGGAGCAGGCTGCTGTTAGGGATGTCCAAGAAGCCTGTGTCTATGATCAATATACTCTCCCTAAGCTTTATGCTAAGATGCAGTACTGTGTTTCCTGTGCCATTCACTCACATGTTGTGAGAGTTCGTTCTCGTACGGATAGAAGAAATCGGCAACCACCACAGCGCTTCATTAGACGCAGGGAGGATCAGCCAAAGCCTGGCCAGCCTGGTCAAACACCTCGTCCTGTTGGAGCCGGAAATCTTGCTCGTGTATGA

Protein sequence

MTSATPPHDDVATDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV

Homology

[Close]

BLAST of Moc09g32130 vs. NCBI nr
Match: XP_022146746.1 (40S ribosomal protein S26-1 [Momordica charantia])

HSP 1 Score: 194.5 bits (493), Expect = 4.8e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 14  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 73
           DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR
Sbjct: 2   DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 61

Query: 74  RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV 111
           RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV
Sbjct: 62  RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV 98

[Close]

BLAST of Moc09g32130 vs. NCBI nr
Match: XP_004146441.1 (40S ribosomal protein S26-1 [Cucumis sativus] >XP_008456941.1 PREDICTED: 40S ribosomal protein S26-1 [Cucumis melo] >XP_038891817.1 40S ribosomal protein S26-1-like [Benincasa hispida] >KAA0067538.1 hypothetical protein E6C27_scaffold50G00610 [Cucumis melo var. makuwa] >KGN50730.1 hypothetical protein Csa_005888 [Cucumis sativus] >TYK22411.1 hypothetical protein E5676_scaffold530G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 186.8 bits (473), Expect = 1.0e-43
Identity = 94/97 (96.91%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 14  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 73
           DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR
Sbjct: 33  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 92

Query: 74  RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV 111
           RNRQPPQRFIRRREDQ KPGQPGQ PRPVGAGN ARV
Sbjct: 93  RNRQPPQRFIRRREDQAKPGQPGQAPRPVGAGNPARV 129

[Close]

BLAST of Moc09g32130 vs. NCBI nr
Match: XP_022943123.1 (40S ribosomal protein S26-1-like [Cucurbita moschata] >XP_022987349.1 40S ribosomal protein S26-1-like [Cucurbita maxima] >KAG6600881.1 40S ribosomal protein S26-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031515.1 40S ribosomal protein S26-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 183.7 bits (465), Expect = 8.4e-43
Identity = 92/97 (94.85%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 14  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 73
           DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR
Sbjct: 33  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 92

Query: 74  RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV 111
           RNRQPPQRFIRRR+DQPKPGQPGQ PRP GAG  ARV
Sbjct: 93  RNRQPPQRFIRRRDDQPKPGQPGQAPRPAGAGIPARV 129

[Close]

BLAST of Moc09g32130 vs. NCBI nr
Match: XP_023529394.1 (40S ribosomal protein S26-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.7 bits (465), Expect = 8.4e-43
Identity = 92/97 (94.85%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 14  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 73
           DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR
Sbjct: 33  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 92

Query: 74  RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV 111
           RNRQPPQRFIRRR+DQPKPGQPGQ PRP GAG  ARV
Sbjct: 93  RNRQPPQRFIRRRDDQPKPGQPGQAPRPAGAGVPARV 129

[Close]

BLAST of Moc09g32130 vs. NCBI nr
Match: XP_022941874.1 (40S ribosomal protein S26-3-like [Cucurbita moschata] >XP_023532350.1 40S ribosomal protein S26-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182.6 bits (462), Expect = 1.9e-42
Identity = 93/100 (93.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 14  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 73
           DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR
Sbjct: 33  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 92

Query: 74  RNRQPPQRFIRRREDQPK---PGQPGQTPRPVGAGNLARV 111
           RNRQPPQRF+RRR+DQPK   PGQPGQ PRPVGAGN ARV
Sbjct: 93  RNRQPPQRFLRRRDDQPKPGQPGQPGQAPRPVGAGNPARV 132

[Close]

BLAST of Moc09g32130 vs. ExPASy Swiss-Prot
Match: P49206 (40S ribosomal protein S26-1 OS=Arabidopsis thaliana OX=3702 GN=RPS26A PE=2 SV=2)

HSP 1 Score: 153.3 bits (386), Expect = 1.6e-36
Identity = 77/95 (81.05%), Postives = 82/95 (86.32%), Query Frame = 0


Query: 14  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 73
           DKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+R
Sbjct: 33  DKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNR 92

Query: 74  RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLA 109
           R R PP RF RR+ED PKPGQPGQ PRP G G  A
Sbjct: 93  RVRTPPPRFTRRKEDTPKPGQPGQAPRPAGPGAAA 127

[Close]

BLAST of Moc09g32130 vs. ExPASy Swiss-Prot
Match: Q8LPJ7 (40S ribosomal protein S26-2 OS=Arabidopsis thaliana OX=3702 GN=RPS26B PE=2 SV=2)

HSP 1 Score: 153.3 bits (386), Expect = 1.6e-36
Identity = 77/95 (81.05%), Postives = 82/95 (86.32%), Query Frame = 0


Query: 14  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 73
           DKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+R
Sbjct: 33  DKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNR 92

Query: 74  RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLA 109
           R R PP RF RR+ED PKPGQPGQ PRP G G  A
Sbjct: 93  RVRTPPPRFARRKEDTPKPGQPGQAPRPAGPGAAA 127

[Close]

BLAST of Moc09g32130 vs. ExPASy Swiss-Prot
Match: Q9LYK9 (40S ribosomal protein S26-3 OS=Arabidopsis thaliana OX=3702 GN=RPS26C PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.0e-35
Identity = 75/95 (78.95%), Postives = 80/95 (84.21%), Query Frame = 0


Query: 14  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 73
           DKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+R
Sbjct: 33  DKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNR 92

Query: 74  RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLA 109
           R R PP RF RR+ED PKP QPGQ PRP G    A
Sbjct: 93  RVRTPPPRFARRKEDTPKPAQPGQAPRPAGGAPAA 127

[Close]

BLAST of Moc09g32130 vs. ExPASy Swiss-Prot
Match: P49216 (40S ribosomal protein S26 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS26 PE=2 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 2.1e-28
Identity = 69/101 (68.32%), Postives = 83/101 (82.18%), Query Frame = 0


Query: 14  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 73
           DKAIKRF VRNIVEQAA+RDVQEACV+D Y LPKLYAK+ +CVSCAIH+H+VRVRSR +R
Sbjct: 33  DKAIKRFQVRNIVEQAAIRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAHIVRVRSRENR 92

Query: 74  RNRQPPQRFIRRREDQPKPGQP-GQTPRPVGAG----NLAR 110
           R+R+PP+RF RRRED+P+  +P G  P P GA     N+AR
Sbjct: 93  RDRRPPERF-RRREDRPQGPRPGGGAPAPGGAAAPAPNVAR 132

[Close]

BLAST of Moc09g32130 vs. ExPASy Swiss-Prot
Match: O93931 (40S ribosomal protein S26 OS=Schizophyllum commune OX=5334 GN=RPS26 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.0e-22
Identity = 51/71 (71.83%), Postives = 58/71 (81.69%), Query Frame = 0


Query: 11  VATDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSR 70
           VA DKAIKRF VRN+VE AA+RD+ +A VY +Y +PKLY K+ YCVSCAIHSHVVRVRSR
Sbjct: 30  VAKDKAIKRFTVRNMVESAAIRDISDASVYPEYAIPKLYIKIAYCVSCAIHSHVVRVRSR 89

Query: 71  TDRRNRQPPQR 82
             RRNR PP R
Sbjct: 90  EGRRNRAPPPR 100

[Close]

BLAST of Moc09g32130 vs. ExPASy TrEMBL
Match: A0A6J1D0A2 (40S ribosomal protein S26 OS=Momordica charantia OX=3673 GN=LOC111015877 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.3e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 14  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 73
           DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR
Sbjct: 2   DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 61

Query: 74  RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV 111
           RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV
Sbjct: 62  RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV 98

[Close]

BLAST of Moc09g32130 vs. ExPASy TrEMBL
Match: A0A5A7VIJ0 (40S ribosomal protein S26 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00060 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.8e-44
Identity = 94/97 (96.91%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 14  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 73
           DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR
Sbjct: 33  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 92

Query: 74  RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV 111
           RNRQPPQRFIRRREDQ KPGQPGQ PRPVGAGN ARV
Sbjct: 93  RNRQPPQRFIRRREDQAKPGQPGQAPRPVGAGNPARV 129

[Close]

BLAST of Moc09g32130 vs. ExPASy TrEMBL
Match: A0A0A0KM45 (40S ribosomal protein S26 OS=Cucumis sativus OX=3659 GN=Csa_5G220930 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.8e-44
Identity = 94/97 (96.91%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 14  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 73
           DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR
Sbjct: 33  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 92

Query: 74  RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV 111
           RNRQPPQRFIRRREDQ KPGQPGQ PRPVGAGN ARV
Sbjct: 93  RNRQPPQRFIRRREDQAKPGQPGQAPRPVGAGNPARV 129

[Close]

BLAST of Moc09g32130 vs. ExPASy TrEMBL
Match: A0A1S3C5M1 (40S ribosomal protein S26 OS=Cucumis melo OX=3656 GN=LOC103496738 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.8e-44
Identity = 94/97 (96.91%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 14  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 73
           DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR
Sbjct: 33  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 92

Query: 74  RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV 111
           RNRQPPQRFIRRREDQ KPGQPGQ PRPVGAGN ARV
Sbjct: 93  RNRQPPQRFIRRREDQAKPGQPGQAPRPVGAGNPARV 129

[Close]

BLAST of Moc09g32130 vs. ExPASy TrEMBL
Match: A0A6J1JIN0 (40S ribosomal protein S26 OS=Cucurbita maxima OX=3661 GN=LOC111484926 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.1e-43
Identity = 92/97 (94.85%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 14  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 73
           DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR
Sbjct: 33  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 92

Query: 74  RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLARV 111
           RNRQPPQRFIRRR+DQPKPGQPGQ PRP GAG  ARV
Sbjct: 93  RNRQPPQRFIRRRDDQPKPGQPGQAPRPAGAGIPARV 129

[Close]

BLAST of Moc09g32130 vs. TAIR 10
Match: AT2G40510.1 (Ribosomal protein S26e family protein )

HSP 1 Score: 153.3 bits (386), Expect = 1.1e-37
Identity = 77/95 (81.05%), Postives = 82/95 (86.32%), Query Frame = 0


Query: 14  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 73
           DKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+R
Sbjct: 33  DKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNR 92

Query: 74  RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLA 109
           R R PP RF RR+ED PKPGQPGQ PRP G G  A
Sbjct: 93  RVRTPPPRFARRKEDTPKPGQPGQAPRPAGPGAAA 127

[Close]

BLAST of Moc09g32130 vs. TAIR 10
Match: AT2G40590.1 (Ribosomal protein S26e family protein )

HSP 1 Score: 153.3 bits (386), Expect = 1.1e-37
Identity = 77/95 (81.05%), Postives = 82/95 (86.32%), Query Frame = 0


Query: 14  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 73
           DKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+R
Sbjct: 33  DKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNR 92

Query: 74  RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLA 109
           R R PP RF RR+ED PKPGQPGQ PRP G G  A
Sbjct: 93  RVRTPPPRFTRRKEDTPKPGQPGQAPRPAGPGAAA 127

[Close]

BLAST of Moc09g32130 vs. TAIR 10
Match: AT3G56340.1 (Ribosomal protein S26e family protein )

HSP 1 Score: 149.1 bits (375), Expect = 2.1e-36
Identity = 75/95 (78.95%), Postives = 80/95 (84.21%), Query Frame = 0


Query: 14  DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDR 73
           DKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+R
Sbjct: 33  DKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNR 92

Query: 74  RNRQPPQRFIRRREDQPKPGQPGQTPRPVGAGNLA 109
           R R PP RF RR+ED PKP QPGQ PRP G    A
Sbjct: 93  RVRTPPPRFARRKEDTPKPAQPGQAPRPAGGAPAA 127

The following BLAST results are available for this feature:

BLAST of Moc09g32130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146746.1	4.8e-46	100.00	40S ribosomal protein S26-1 [Momordica charantia]	[more]
XP_004146441.1	1.0e-43	96.91	40S ribosomal protein S26-1 [Cucumis sativus] >XP_008456941.1 PREDICTED: 40S rib...	[more]
XP_022943123.1	8.4e-43	94.85	40S ribosomal protein S26-1-like [Cucurbita moschata] >XP_022987349.1 40S riboso...	[more]
XP_023529394.1	8.4e-43	94.85	40S ribosomal protein S26-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022941874.1	1.9e-42	93.00	40S ribosomal protein S26-3-like [Cucurbita moschata] >XP_023532350.1 40S riboso...	[more]

BLAST of Moc09g32130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49206	1.6e-36	81.05	40S ribosomal protein S26-1 OS=Arabidopsis thaliana OX=3702 GN=RPS26A PE=2 SV=2	[more]
Q8LPJ7	1.6e-36	81.05	40S ribosomal protein S26-2 OS=Arabidopsis thaliana OX=3702 GN=RPS26B PE=2 SV=2	[more]
Q9LYK9	3.0e-35	78.95	40S ribosomal protein S26-3 OS=Arabidopsis thaliana OX=3702 GN=RPS26C PE=2 SV=1	[more]
P49216	2.1e-28	68.32	40S ribosomal protein S26 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS26 PE=2...	[more]
O93931	5.0e-22	71.83	40S ribosomal protein S26 OS=Schizophyllum commune OX=5334 GN=RPS26 PE=2 SV=1	[more]

BLAST of Moc09g32130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D0A2	2.3e-46	100.00	40S ribosomal protein S26 OS=Momordica charantia OX=3673 GN=LOC111015877 PE=3 SV...	[more]
A0A5A7VIJ0	4.8e-44	96.91	40S ribosomal protein S26 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0KM45	4.8e-44	96.91	40S ribosomal protein S26 OS=Cucumis sativus OX=3659 GN=Csa_5G220930 PE=3 SV=1	[more]
A0A1S3C5M1	4.8e-44	96.91	40S ribosomal protein S26 OS=Cucumis melo OX=3656 GN=LOC103496738 PE=3 SV=1	[more]
A0A6J1JIN0	4.1e-43	94.85	40S ribosomal protein S26 OS=Cucurbita maxima OX=3661 GN=LOC111484926 PE=3 SV=1	[more]

BLAST of Moc09g32130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40510.1	1.1e-37	81.05	Ribosomal protein S26e family protein	[more]
AT2G40590.1	1.1e-37	81.05	Ribosomal protein S26e family protein	[more]
AT3G56340.1	2.1e-36	78.95	Ribosomal protein S26e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038551	Ribosomal protein S26e superfamily	GENE3D	3.30.1740.20	Ribosomal protein S26e	coord: 5..96 e-value: 2.6E-40 score: 139.4
IPR000892	Ribosomal protein S26e	PFAM	PF01283	Ribosomal_S26e	coord: 11..87 e-value: 1.7E-36 score: 124.9
IPR000892	Ribosomal protein S26e	PANTHER	PTHR12538	40S RIBOSOMAL PROTEIN S26	coord: 12..106
IPR000892	Ribosomal protein S26e	PROSITE	PS00733	RIBOSOMAL_S26E	coord: 54..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..110
None	No IPR available	PANTHER	PTHR12538:SF16	40S RIBOSOMAL PROTEIN S26	coord: 12..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g32130.1	Moc09g32130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019430	removal of superoxide radicals
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0004784	superoxide dismutase activity