Moc09g31840 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g31840
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNA-dependent RNA polymerase
Locationchr9: 24036089 .. 24040674 (-)
RNA-Seq ExpressionMoc09g31840
SyntenyMoc09g31840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAAAACAGTTCATATTAGTGGATTTCCTGCAGGCGTCACGGCAGATGCCGTTAGGAGTTATTTGGAGGGTCGTACGGGTGTTGGAACTGTCTATGCTCTTAAGATTAGAGAACCCAAAAAGGGGGGAAGTAGATTATATGCTTTTGTTCAATTCACTGGCTCTAGAGAAGCTGAGTTGATCATTTCATTGGCTAATCAACGGATTCAACGCCTGTGGTATGGAACTTCGTATCTCAAGGCTCGAGAAGCGGATGTTGATATTATACCGAAGCCTAGGACGTACATGCATACCTTGGAAGATTTGACATTGTGCTTTGGTTGTCAGGTCTCAAGTGAAAAGTTTTGTGTCCTGTGGGAAGGAAGGGATGTTTTGGTGACTTTTGGATTTGGAATGCGAAAAATGAACTTTCGTTTGTCTCATAACTTTGTAGAGTACAGGTTCGAGCTTTCGTACGAGAACATTTGGCGGATAGAACTCCATCATTCGCGGCATCAGTCCATGAAGTATCTTGTGATCCAGGTTCTGGGGTCAAATTCCTTTCCAAAGTTGTCTCATGCTATGCTAATGTTGAAAAGTATTATTATCCTCTCTTAAAGTTGAAAAATGTTGCTACTTCTGTTTAAGCATTGTTTCAACTATTACATTAGCAATTTGAACATCATAACGTTTTATCCTCGTTGAAAAAGTGTTGCTATCCCTCTTAATTGTTGGAATAAGAGTACTTTATTGAATGATATTTAGGTTGATGGAACGACCAGGCAGCGCATCTAGATTTATTCACTTGCATATTATTTGCCATCTTCCAAGATATTACTGTATGACTCTAGATTTCCCCACTTGCATTCTAATTGTCATTGTTCATTTACATTCTTGAATGTTGAATTCTCTTGGTTATTCATGAACTAATGTGGAAGGTTTGTATCAATATATATGAAAACCAAACTGTTTGTTCACAATGACATTTGATGGCCTTTTGATGAATGACATGTATGCTGAAAATTTTGTTTCATTGCTTGAATTTGATGTCTGCAGTTCATCAAATAATTGTTATGTGTTTTTTTTTCTCAGTTATATGGAGCTCCTTGGATATATAAAAAAGTTGAATCTTCTAGTGGGAGTAGACAGGTTTTTGACGATCCTCTTTTGAACTACTTCAAAGAAGTACCTGATGATCAATGGGTTAGAAGTACTGATTTTACTCCATCATCCTGTATAGGACAATCTTCTTCGTTATGTTTGAAGCTACATAACTGTCGTGAACTTCCAAATTTTGGACAGAATTTTGCTTATTACAAAGAAACTGAAGATGAATTTCGGTTGGTTGATGGAGGCAACGGTTTTTCGTGCTCTGCAGATCTTGTTCCCATGGTTGATTCTCGTCCTGATATTTTTCTGCCATATAAGATTATCTTTAAAATAAACGCATTGGTTCAACATGGTTGCATTTCAGGGCCAGCACTTGATACTAGTTTCTATCATTTGGTCGATCCGCGTAGAATAAAGATTGAATTTGTAGAACATGCCTTGGATAGACTATTCCATTTAAAGGAATGCGAGTATAAGCCATATAGTTGGCTTACTGAGCAGTACAAGAAGTATTTAAGGCGTCCTCCAAATTCTCCTGCCATATCTTTGGATGCTGGATTGGTATATGTTCGCAGGGTCCAAATAACACCTTGTAAGGTGTACTTTTGTGGTCCTGAAGTCAATGTCTCGAATCGGGTGTTGCGCCACTTTTCTCGAGATATCGATAATTTTCTTCGGGTATCTTTTGTCGATGAGGAGTGGGATAAAATGCGTTCGATAGATTTGTTGCCACGAACATCTTCTACGATTAAGGATCGTAAAACTGAAATCTACAAGAGAATTCTCTCTGTTCTTAAAAATGGCATAGTCATTGGTGGTAAAATGTTTAAGTTTCTTGCATTCTCATCAAGTCAGTTAAGAGATAATTCTTTGTGGATGTTTGCTACCAGACCTGGCCTCGACGCAGAAGATATTCGAGCGTGGATGGGAGATTTTAGACAGATCAAGAATCCAGCAAAGTATGCTGCTAGATTGGGCCAATCATTTGGCTCATCGACCGAGACACTTTCGGTTGCTAGACATGAAAGGGAAATTATTCCTGACATAGAGGTTCAACATGGGGAAGTAAAGTATGTGTTTTCTGATGGAATTGGAAAGATATCAAGCGATTTTGCCAAAAAAGTATCTGCAAAATGTGGTTTGAAAGCATTCACCCCATCTGCTTTTCAGATTCGTTATGGCGGTTATAAGGGTGTTGTTGCTGTTGATCCATACTCATCAAAAAAATTATCTTTGAGGAAGAGCATGTGCAAATTTGAATCAGACAACACGAAACTTGACGTTTTAGGATATAGCAAATATCAACCGTGCTTCCTTAATCGTCAATTGATTACTCTTTTGTCTACTCTAGGTGTTAGAGATGAAGTTTTTGAGAAAAAGCAACGCGAAGCTGTTGAACAATTGGACGCGATATTAACTGATCCTTTGAAGGCACAAGAAGCTTTAGAGTTGATGGCTCCGGGAGAGAATACTAATGTCCTTAAGGAAATGCTCAAATGTGGCTATAAGCCTAATGTTGAGCCTTATCTATCAATGATGTTACAGGCTTTTCGGGCATCAAAGTTGCTAGATTTACGCACCAAATCAAGAATGTTTATTCCAAATGGGAGAGCGATGATGGGATGTCTTGACGAGACTGGGAGCTTGGAATATGGACAAGTATTTGTGCAAGTCTCAGGCGCTAAGCAAAGCATTTTATCCGTCACGACCTCCGCATTCAATATAAGTAGTTCGGAACAGCGTGTCGCCATCGAGGGAAATGTAGTTGTTGCAAAAAATCCGTGCCTGCACCCTGGGGACGTTCGTGTATTAAAGGCTGTGAATGTGCCTCGGTTGTATCATATGGTTGATTGTGTAGTTTTTCCACAAAAAGGATCAAGGTTAGCATATTCATCTATACTAGTTCTTTTTTTATTTGAAAAATAACATCTGTTTTCAACTTTAAATGCAAGAAAAACTAATTTTTTGGCATAGTTTTGTTACAAAGATTTTCCTTGCCAATATACATTACTAACCAGATGTTGCATTGTTAATCTAGACCTCATCCGAATGAATGCTCGGGTAGTGATTTGGATGGGGATATATACTTTGTCTGTTGGGACACTGAGCTGATCCCGCCTCGACAAATTCCACCGATGGATTATACTCCTGCACCACCTACTCAGTTGGATCGCGACGTCACAATCGAGGTATTTCCTCTCAAACCAATGGCATGTTTCGATAACTTGAAAACCCATTCGGATTTCCTTTTCTTTTTTCAGTGTTTTACCTCAATGCCTACTGTAAAGAATATATTCACTTTGTAAACCATTATGATTTTGGTCCAGTAGTCAATAAGAGCAAATGTTTATAGTAAAGTCTTAGTAGAGGGAATGAGTTCAAATCATGGTAGCCACCTACATCGGATTAAATATCTCACTAGTTACTTTGGCAACCAAATGTAGTAGTTCAGGCAGTTGTCCCGTGAGAATAGTCGAGATGTATGCATCGAGATGTATGCAAACTGTCCCAGACACTCACGGATATAAAAAAAAGAAAGAATATATTCACTTTGTACGTTATGTCTGACTAGAAGAGAAACCACTCATGTTTGTATGTTGTTTGTCCTAATTTGAAACTCTGCTCCTCTTTAACACCAGGATGTGCAAGAATATTTTGTGAACTACATGGTTAACGACAGTCTTGGCATCATTGCCAATGCCCACACTGCCTTTGCTGATAAAGAGCTCTTTAAAGCAAGAAGTTCTCCTTGTATAAACCTTGCAAAGCTCTTTTCCATTGCTGTGGACTTCCCAAAAACTGGAGTACCAGCTATAATACCTCCCGAGTTATATGTCAAAGAGTTTCCCGACTTCATGGAGAAGCCCGACAAACCCTCCTACGAATCGAAGAATGTGATCGGAAAGCTTTTTCGGGCAGTGAAAGACATTGCACCAACAACAAGCCATATCAGTTTGTTTACTCGAGAGGTAGCAAGGCAGTGTTACGATTCTGATATGGAAATTGAAGGCTATGAAGATTACGTCGATGATGCCATCTATCATAAAAACAATTATGATTATAAGTTGGGGAATTTGCTCGATTATTACGGGATCAAGTCTGAGGCTGAGATCCTTAGTGGAAATATAATGACTATGTCCAAGTCTTTCACCAAAAAAAGAGATGCAGAAGCCATCAACTTGGCTATCAGGTCTCTGAGAAAGGAGGCTAGGACTTGGTTCAATGAGAGAGAAAGCGGTCCCGATTCAGATTCAGTTTCGGGCTTGGATGATTTATTTGCCAAAGCTTCAGCCTGGTACCATGTCACTTATCATCCGAGTTATTGGGGAAGCTATAATGAGGATATGAACCGTGATCATTATCTGAGCTTTCCATGGTGTGTTTATGACAAGCTGATGCAGATTAAGGAGAATAATGTGAGGAGAAAACAGAGAGCTTCGAGACTAGCAGCTCTTGACAGCAGATTCAGGAATGCATTGAATCTTGGACATTGA

mRNA sequence

ATGGGAAAAACAGTTCATATTAGTGGATTTCCTGCAGGCGTCACGGCAGATGCCGTTAGGAGTTATTTGGAGGGTCGTACGGGTGTTGGAACTGTCTATGCTCTTAAGATTAGAGAACCCAAAAAGGGGGGAAGTAGATTATATGCTTTTGTTCAATTCACTGGCTCTAGAGAAGCTGAGTTGATCATTTCATTGGCTAATCAACGGATTCAACGCCTGTGGTATGGAACTTCGTATCTCAAGGCTCGAGAAGCGGATGTTGATATTATACCGAAGCCTAGGACGTACATGCATACCTTGGAAGATTTGACATTGTGCTTTGGTTGTCAGGTCTCAAGTGAAAAGTTTTGTGTCCTGTGGGAAGGAAGGGATGTTTTGGTGACTTTTGGATTTGGAATGCGAAAAATGAACTTTCGTTTGTCTCATAACTTTGTAGAGTACAGGTTCGAGCTTTCGTACGAGAACATTTGGCGGATAGAACTCCATCATTCGCGGCATCAGTCCATGAAGTATCTTGTGATCCAGTTATATGGAGCTCCTTGGATATATAAAAAAGTTGAATCTTCTAGTGGGAGTAGACAGGTTTTTGACGATCCTCTTTTGAACTACTTCAAAGAAGTACCTGATGATCAATGGGTTAGAAGTACTGATTTTACTCCATCATCCTGTATAGGACAATCTTCTTCGTTATGTTTGAAGCTACATAACTGTCGTGAACTTCCAAATTTTGGACAGAATTTTGCTTATTACAAAGAAACTGAAGATGAATTTCGGTTGGTTGATGGAGGCAACGGTTTTTCGTGCTCTGCAGATCTTGTTCCCATGGTTGATTCTCGTCCTGATATTTTTCTGCCATATAAGATTATCTTTAAAATAAACGCATTGGTTCAACATGGTTGCATTTCAGGGCCAGCACTTGATACTAGTTTCTATCATTTGGTCGATCCGCGTAGAATAAAGATTGAATTTGTAGAACATGCCTTGGATAGACTATTCCATTTAAAGGAATGCGAGTATAAGCCATATAGTTGGCTTACTGAGCAGTACAAGAAGTATTTAAGGCGTCCTCCAAATTCTCCTGCCATATCTTTGGATGCTGGATTGGTATATGTTCGCAGGGTCCAAATAACACCTTGTAAGGTGTACTTTTGTGGTCCTGAAGTCAATGTCTCGAATCGGGTGTTGCGCCACTTTTCTCGAGATATCGATAATTTTCTTCGGGTATCTTTTGTCGATGAGGAGTGGGATAAAATGCGTTCGATAGATTTGTTGCCACGAACATCTTCTACGATTAAGGATCGTAAAACTGAAATCTACAAGAGAATTCTCTCTGTTCTTAAAAATGGCATAGTCATTGGTGGTAAAATGTTTAAGTTTCTTGCATTCTCATCAAGTCAGTTAAGAGATAATTCTTTGTGGATGTTTGCTACCAGACCTGGCCTCGACGCAGAAGATATTCGAGCGTGGATGGGAGATTTTAGACAGATCAAGAATCCAGCAAAGTATGCTGCTAGATTGGGCCAATCATTTGGCTCATCGACCGAGACACTTTCGGTTGCTAGACATGAAAGGGAAATTATTCCTGACATAGAGGTTCAACATGGGGAAGTAAAGTATGTGTTTTCTGATGGAATTGGAAAGATATCAAGCGATTTTGCCAAAAAAGTATCTGCAAAATGTGGTTTGAAAGCATTCACCCCATCTGCTTTTCAGATTCGTTATGGCGGTTATAAGGGTGTTGTTGCTGTTGATCCATACTCATCAAAAAAATTATCTTTGAGGAAGAGCATGTGCAAATTTGAATCAGACAACACGAAACTTGACGTTTTAGGATATAGCAAATATCAACCGTGCTTCCTTAATCGTCAATTGATTACTCTTTTGTCTACTCTAGGTGTTAGAGATGAAGTTTTTGAGAAAAAGCAACGCGAAGCTGTTGAACAATTGGACGCGATATTAACTGATCCTTTGAAGGCACAAGAAGCTTTAGAGTTGATGGCTCCGGGAGAGAATACTAATGTCCTTAAGGAAATGCTCAAATGTGGCTATAAGCCTAATGTTGAGCCTTATCTATCAATGATGTTACAGGCTTTTCGGGCATCAAAGTTGCTAGATTTACGCACCAAATCAAGAATGTTTATTCCAAATGGGAGAGCGATGATGGGATGTCTTGACGAGACTGGGAGCTTGGAATATGGACAAGTATTTGTGCAAGTCTCAGGCGCTAAGCAAAGCATTTTATCCGTCACGACCTCCGCATTCAATATAAGTAGTTCGGAACAGCGTGTCGCCATCGAGGGAAATGTAGTTGTTGCAAAAAATCCGTGCCTGCACCCTGGGGACGTTCGTGTATTAAAGGCTGTGAATGTGCCTCGGTTGTATCATATGGTTGATTGTGTAGTTTTTCCACAAAAAGGATCAAGACCTCATCCGAATGAATGCTCGGGTAGTGATTTGGATGGGGATATATACTTTGTCTGTTGGGACACTGAGCTGATCCCGCCTCGACAAATTCCACCGATGGATTATACTCCTGCACCACCTACTCAGTTGGATCGCGACGTCACAATCGAGGATGTGCAAGAATATTTTGTGAACTACATGGTTAACGACAGTCTTGGCATCATTGCCAATGCCCACACTGCCTTTGCTGATAAAGAGCTCTTTAAAGCAAGAAGTTCTCCTTGTATAAACCTTGCAAAGCTCTTTTCCATTGCTGTGGACTTCCCAAAAACTGGAGTACCAGCTATAATACCTCCCGAGTTATATGTCAAAGAGTTTCCCGACTTCATGGAGAAGCCCGACAAACCCTCCTACGAATCGAAGAATGTGATCGGAAAGCTTTTTCGGGCAGTGAAAGACATTGCACCAACAACAAGCCATATCAGTTTGTTTACTCGAGAGGTAGCAAGGCAGTGTTACGATTCTGATATGGAAATTGAAGGCTATGAAGATTACGTCGATGATGCCATCTATCATAAAAACAATTATGATTATAAGTTGGGGAATTTGCTCGATTATTACGGGATCAAGTCTGAGGCTGAGATCCTTAGTGGAAATATAATGACTATGTCCAAGTCTTTCACCAAAAAAAGAGATGCAGAAGCCATCAACTTGGCTATCAGGTCTCTGAGAAAGGAGGCTAGGACTTGGTTCAATGAGAGAGAAAGCGGTCCCGATTCAGATTCAGTTTCGGGCTTGGATGATTTATTTGCCAAAGCTTCAGCCTGGTACCATGTCACTTATCATCCGAGTTATTGGGGAAGCTATAATGAGGATATGAACCGTGATCATTATCTGAGCTTTCCATGGTGTGTTTATGACAAGCTGATGCAGATTAAGGAGAATAATGTGAGGAGAAAACAGAGAGCTTCGAGACTAGCAGCTCTTGACAGCAGATTCAGGAATGCATTGAATCTTGGACATTGA

Coding sequence (CDS)

ATGGGAAAAACAGTTCATATTAGTGGATTTCCTGCAGGCGTCACGGCAGATGCCGTTAGGAGTTATTTGGAGGGTCGTACGGGTGTTGGAACTGTCTATGCTCTTAAGATTAGAGAACCCAAAAAGGGGGGAAGTAGATTATATGCTTTTGTTCAATTCACTGGCTCTAGAGAAGCTGAGTTGATCATTTCATTGGCTAATCAACGGATTCAACGCCTGTGGTATGGAACTTCGTATCTCAAGGCTCGAGAAGCGGATGTTGATATTATACCGAAGCCTAGGACGTACATGCATACCTTGGAAGATTTGACATTGTGCTTTGGTTGTCAGGTCTCAAGTGAAAAGTTTTGTGTCCTGTGGGAAGGAAGGGATGTTTTGGTGACTTTTGGATTTGGAATGCGAAAAATGAACTTTCGTTTGTCTCATAACTTTGTAGAGTACAGGTTCGAGCTTTCGTACGAGAACATTTGGCGGATAGAACTCCATCATTCGCGGCATCAGTCCATGAAGTATCTTGTGATCCAGTTATATGGAGCTCCTTGGATATATAAAAAAGTTGAATCTTCTAGTGGGAGTAGACAGGTTTTTGACGATCCTCTTTTGAACTACTTCAAAGAAGTACCTGATGATCAATGGGTTAGAAGTACTGATTTTACTCCATCATCCTGTATAGGACAATCTTCTTCGTTATGTTTGAAGCTACATAACTGTCGTGAACTTCCAAATTTTGGACAGAATTTTGCTTATTACAAAGAAACTGAAGATGAATTTCGGTTGGTTGATGGAGGCAACGGTTTTTCGTGCTCTGCAGATCTTGTTCCCATGGTTGATTCTCGTCCTGATATTTTTCTGCCATATAAGATTATCTTTAAAATAAACGCATTGGTTCAACATGGTTGCATTTCAGGGCCAGCACTTGATACTAGTTTCTATCATTTGGTCGATCCGCGTAGAATAAAGATTGAATTTGTAGAACATGCCTTGGATAGACTATTCCATTTAAAGGAATGCGAGTATAAGCCATATAGTTGGCTTACTGAGCAGTACAAGAAGTATTTAAGGCGTCCTCCAAATTCTCCTGCCATATCTTTGGATGCTGGATTGGTATATGTTCGCAGGGTCCAAATAACACCTTGTAAGGTGTACTTTTGTGGTCCTGAAGTCAATGTCTCGAATCGGGTGTTGCGCCACTTTTCTCGAGATATCGATAATTTTCTTCGGGTATCTTTTGTCGATGAGGAGTGGGATAAAATGCGTTCGATAGATTTGTTGCCACGAACATCTTCTACGATTAAGGATCGTAAAACTGAAATCTACAAGAGAATTCTCTCTGTTCTTAAAAATGGCATAGTCATTGGTGGTAAAATGTTTAAGTTTCTTGCATTCTCATCAAGTCAGTTAAGAGATAATTCTTTGTGGATGTTTGCTACCAGACCTGGCCTCGACGCAGAAGATATTCGAGCGTGGATGGGAGATTTTAGACAGATCAAGAATCCAGCAAAGTATGCTGCTAGATTGGGCCAATCATTTGGCTCATCGACCGAGACACTTTCGGTTGCTAGACATGAAAGGGAAATTATTCCTGACATAGAGGTTCAACATGGGGAAGTAAAGTATGTGTTTTCTGATGGAATTGGAAAGATATCAAGCGATTTTGCCAAAAAAGTATCTGCAAAATGTGGTTTGAAAGCATTCACCCCATCTGCTTTTCAGATTCGTTATGGCGGTTATAAGGGTGTTGTTGCTGTTGATCCATACTCATCAAAAAAATTATCTTTGAGGAAGAGCATGTGCAAATTTGAATCAGACAACACGAAACTTGACGTTTTAGGATATAGCAAATATCAACCGTGCTTCCTTAATCGTCAATTGATTACTCTTTTGTCTACTCTAGGTGTTAGAGATGAAGTTTTTGAGAAAAAGCAACGCGAAGCTGTTGAACAATTGGACGCGATATTAACTGATCCTTTGAAGGCACAAGAAGCTTTAGAGTTGATGGCTCCGGGAGAGAATACTAATGTCCTTAAGGAAATGCTCAAATGTGGCTATAAGCCTAATGTTGAGCCTTATCTATCAATGATGTTACAGGCTTTTCGGGCATCAAAGTTGCTAGATTTACGCACCAAATCAAGAATGTTTATTCCAAATGGGAGAGCGATGATGGGATGTCTTGACGAGACTGGGAGCTTGGAATATGGACAAGTATTTGTGCAAGTCTCAGGCGCTAAGCAAAGCATTTTATCCGTCACGACCTCCGCATTCAATATAAGTAGTTCGGAACAGCGTGTCGCCATCGAGGGAAATGTAGTTGTTGCAAAAAATCCGTGCCTGCACCCTGGGGACGTTCGTGTATTAAAGGCTGTGAATGTGCCTCGGTTGTATCATATGGTTGATTGTGTAGTTTTTCCACAAAAAGGATCAAGACCTCATCCGAATGAATGCTCGGGTAGTGATTTGGATGGGGATATATACTTTGTCTGTTGGGACACTGAGCTGATCCCGCCTCGACAAATTCCACCGATGGATTATACTCCTGCACCACCTACTCAGTTGGATCGCGACGTCACAATCGAGGATGTGCAAGAATATTTTGTGAACTACATGGTTAACGACAGTCTTGGCATCATTGCCAATGCCCACACTGCCTTTGCTGATAAAGAGCTCTTTAAAGCAAGAAGTTCTCCTTGTATAAACCTTGCAAAGCTCTTTTCCATTGCTGTGGACTTCCCAAAAACTGGAGTACCAGCTATAATACCTCCCGAGTTATATGTCAAAGAGTTTCCCGACTTCATGGAGAAGCCCGACAAACCCTCCTACGAATCGAAGAATGTGATCGGAAAGCTTTTTCGGGCAGTGAAAGACATTGCACCAACAACAAGCCATATCAGTTTGTTTACTCGAGAGGTAGCAAGGCAGTGTTACGATTCTGATATGGAAATTGAAGGCTATGAAGATTACGTCGATGATGCCATCTATCATAAAAACAATTATGATTATAAGTTGGGGAATTTGCTCGATTATTACGGGATCAAGTCTGAGGCTGAGATCCTTAGTGGAAATATAATGACTATGTCCAAGTCTTTCACCAAAAAAAGAGATGCAGAAGCCATCAACTTGGCTATCAGGTCTCTGAGAAAGGAGGCTAGGACTTGGTTCAATGAGAGAGAAAGCGGTCCCGATTCAGATTCAGTTTCGGGCTTGGATGATTTATTTGCCAAAGCTTCAGCCTGGTACCATGTCACTTATCATCCGAGTTATTGGGGAAGCTATAATGAGGATATGAACCGTGATCATTATCTGAGCTTTCCATGGTGTGTTTATGACAAGCTGATGCAGATTAAGGAGAATAATGTGAGGAGAAAACAGAGAGCTTCGAGACTAGCAGCTCTTGACAGCAGATTCAGGAATGCATTGAATCTTGGACATTGA

Protein sequence

MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAELIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLWEGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAPWIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLKLHNCRELPNFGQNFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGCISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSPAISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRSIDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPGLDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQEALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAMMGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPGDVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLAKLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTSHISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGNIMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHVTYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNLGH
Homology
[Close]
BLAST of Moc09g31840 vs. NCBI nr
Match: XP_022146805.1 (probable RNA-dependent RNA polymerase 1 isoform X1 [Momordica charantia])

HSP 1 Score: 2327.0 bits (6029), Expect = 0.0e+00
Identity = 1142/1142 (100.00%), Postives = 1142/1142 (100.00%), Query Frame = 0 

Query: 1    MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE 60
            MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE
Sbjct: 1    MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE 60

Query: 61   LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW 120
            LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW
Sbjct: 61   LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW 120

Query: 121  EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP 180
            EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP
Sbjct: 121  EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP 180

Query: 181  WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLKLHNCREL 240
            WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLKLHNCREL
Sbjct: 181  WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLKLHNCREL 240

Query: 241  PNFGQNFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGC 300
            PNFGQNFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGC
Sbjct: 241  PNFGQNFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGC 300

Query: 301  ISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSP 360
            ISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSP
Sbjct: 301  ISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSP 360

Query: 361  AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRS 420
            AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRS
Sbjct: 361  AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRS 420

Query: 421  IDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPG 480
            IDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPG
Sbjct: 421  IDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPG 480

Query: 481  LDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 540
            LDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV
Sbjct: 481  LDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 540

Query: 541  FSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKF 600
            FSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKF
Sbjct: 541  FSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKF 600

Query: 601  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ 660
            ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ
Sbjct: 601  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ 660

Query: 661  EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM 720
            EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM
Sbjct: 661  EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM 720

Query: 721  MGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPG 780
            MGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPG
Sbjct: 721  MGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPG 780

Query: 781  DVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 840
            DVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP
Sbjct: 781  DVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 840

Query: 841  MDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLA 900
            MDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLA
Sbjct: 841  MDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLA 900

Query: 901  KLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTS 960
            KLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTS
Sbjct: 901  KLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTS 960

Query: 961  HISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGN 1020
            HISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGN
Sbjct: 961  HISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGN 1020

Query: 1021 IMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHV 1080
            IMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHV
Sbjct: 1021 IMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHV 1080

Query: 1081 TYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNL 1140
            TYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNL
Sbjct: 1081 TYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNL 1140

Query: 1141 GH 1143
            GH
Sbjct: 1141 GH 1142

[Close]
BLAST of Moc09g31840 vs. NCBI nr
Match: XP_022146806.1 (probable RNA-dependent RNA polymerase 1 isoform X2 [Momordica charantia])

HSP 1 Score: 2239.9 bits (5803), Expect = 0.0e+00
Identity = 1109/1142 (97.11%), Postives = 1109/1142 (97.11%), Query Frame = 0 

Query: 1    MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE 60
            MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE
Sbjct: 1    MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE 60

Query: 61   LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW 120
            LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW
Sbjct: 61   LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW 120

Query: 121  EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP 180
            EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP
Sbjct: 121  EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP 180

Query: 181  WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLKLHNCREL 240
            WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQW                            
Sbjct: 181  WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQW---------------------------- 240

Query: 241  PNFGQNFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGC 300
                 NFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGC
Sbjct: 241  -----NFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGC 300

Query: 301  ISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSP 360
            ISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSP
Sbjct: 301  ISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSP 360

Query: 361  AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRS 420
            AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRS
Sbjct: 361  AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRS 420

Query: 421  IDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPG 480
            IDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPG
Sbjct: 421  IDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPG 480

Query: 481  LDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 540
            LDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV
Sbjct: 481  LDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 540

Query: 541  FSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKF 600
            FSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKF
Sbjct: 541  FSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKF 600

Query: 601  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ 660
            ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ
Sbjct: 601  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ 660

Query: 661  EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM 720
            EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM
Sbjct: 661  EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM 720

Query: 721  MGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPG 780
            MGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPG
Sbjct: 721  MGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPG 780

Query: 781  DVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 840
            DVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP
Sbjct: 781  DVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 840

Query: 841  MDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLA 900
            MDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLA
Sbjct: 841  MDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLA 900

Query: 901  KLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTS 960
            KLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTS
Sbjct: 901  KLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTS 960

Query: 961  HISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGN 1020
            HISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGN
Sbjct: 961  HISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGN 1020

Query: 1021 IMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHV 1080
            IMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHV
Sbjct: 1021 IMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHV 1080

Query: 1081 TYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNL 1140
            TYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNL
Sbjct: 1081 TYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNL 1109

Query: 1141 GH 1143
            GH
Sbjct: 1141 GH 1109

[Close]
BLAST of Moc09g31840 vs. NCBI nr
Match: XP_038891504.1 (RNA-dependent RNA polymerase 1 isoform X1 [Benincasa hispida] >XP_038891505.1 RNA-dependent RNA polymerase 1 isoform X2 [Benincasa hispida])

HSP 1 Score: 1917.9 bits (4967), Expect = 0.0e+00
Identity = 942/1141 (82.56%), Postives = 1027/1141 (90.01%), Query Frame = 0 

Query: 1    MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE 60
            MGKTVHISGFP+ VTADAV+S+LEGRTGVGTVYA+K+R PK+GG+R+YA VQFT + +AE
Sbjct: 1    MGKTVHISGFPSNVTADAVKSFLEGRTGVGTVYAIKVRAPKRGGARVYAIVQFTSATQAE 60

Query: 61   LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW 120
            LIISLAN   Q LWYG+SYLKAR A+VDI+PKPRTYM+TLEDL LCFGCQVSSEKF VLW
Sbjct: 61   LIISLAN---QSLWYGSSYLKARAAEVDIVPKPRTYMYTLEDLPLCFGCQVSSEKFRVLW 120

Query: 121  EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP 180
            EG   LVTFG GMRKMNF L HN V+YR ELSYENIW+I+LHH +H+SMKYL+IQLYGAP
Sbjct: 121  EGDIDLVTFGIGMRKMNFHLKHNSVKYRLELSYENIWQIQLHHPQHRSMKYLIIQLYGAP 180

Query: 181  WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLKLHNCREL 240
             IYK V  +  S Q+FDDPL N+F EVPDDQW+R+ DFTPS  IGQSSSLCLKL N  +L
Sbjct: 181  RIYKNV--APCSVQIFDDPLFNFFMEVPDDQWIRTADFTPSCSIGQSSSLCLKLPNRCQL 240

Query: 241  PNFGQNFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGC 300
            PNF QNFAYY+E E+EF+LVDG   FS   DL P+VDSRP + LPY+I+FKINALVQHGC
Sbjct: 241  PNFRQNFAYYEEFENEFQLVDGDASFSFCRDLAPIVDSRPHV-LPYEIMFKINALVQHGC 300

Query: 301  ISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSP 360
            I  P +DTSFY LVDPRRI+IEFVEHAL++LFHLKEC Y+P S++TEQY+KY R PPNSP
Sbjct: 301  IPWPLIDTSFYRLVDPRRIRIEFVEHALEKLFHLKECSYEPSSFITEQYRKYSRHPPNSP 360

Query: 361  AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRS 420
            AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHF +D DNFLRVSFVDEEWDKMRS
Sbjct: 361  AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDKMRS 420

Query: 421  IDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPG 480
             DLLPR S T +D KT+IYKRILSVL+NGIVIG K F+FLAFSSSQLRDNSLWMFA+RPG
Sbjct: 421  TDLLPRMSPTSEDSKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNSLWMFASRPG 480

Query: 481  LDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 540
            LDA DIRAWMGDFR IKNPAKYAARLGQSFGSSTETLSVAR EREIIPDIE+QHGEVKYV
Sbjct: 481  LDAADIRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREIIPDIELQHGEVKYV 540

Query: 541  FSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKF 600
            FSDGIGKIS+DFAKKV+AKCG +  TPSAFQIRYGGYKGVVAVDP+SS KLSLRKSMCKF
Sbjct: 541  FSDGIGKISNDFAKKVAAKCGFQGSTPSAFQIRYGGYKGVVAVDPHSSIKLSLRKSMCKF 600

Query: 601  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ 660
            ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDE+FE KQREAVEQLDAILTDPLKA+
Sbjct: 601  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVEQLDAILTDPLKAR 660

Query: 661  EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM 720
            EALELMAPGENTN+LKEMLKCGYKP+VEPYLSMMLQ FRASKLL+LRTKSR+FIPNGRAM
Sbjct: 661  EALELMAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAM 720

Query: 721  MGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPG 780
            MGCLDET +LEYGQVFVQ+S A++  LS  + AFN+S  E R+ IEGNV VAKNPCLHPG
Sbjct: 721  MGCLDETRTLEYGQVFVQISSARRRNLS-DSFAFNMSGPEHRLVIEGNVTVAKNPCLHPG 780

Query: 781  DVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 840
            DVRVLKAVN+P LYH+VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP
Sbjct: 781  DVRVLKAVNIPWLYHLVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 840

Query: 841  MDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLA 900
            MDYTPAPP QLDRDVT ED+QEYFVNYMVNDSLGIIANAHTAFADKE FKAR SPC+ LA
Sbjct: 841  MDYTPAPPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARGSPCVELA 900

Query: 901  KLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTS 960
            KLFSIAVDFPKTGVPAIIPP LYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPT S
Sbjct: 901  KLFSIAVDFPKTGVPAIIPPHLYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTLS 960

Query: 961  HISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGN 1020
            +I  FTR+VA QCYDSDME+EG+EDYV DA YHK+NYDYKLGNLLDYYGIKSEAEILSG+
Sbjct: 961  YIRSFTRDVAMQCYDSDMEVEGFEDYVGDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGS 1020

Query: 1021 IMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHV 1080
            IM MSKSFT++RDAEAINLA+RSLRKEARTWFN RE G +SDS    DDLFAKASAWYHV
Sbjct: 1021 IMRMSKSFTRRRDAEAINLAVRSLRKEARTWFNAREGGSNSDS----DDLFAKASAWYHV 1080

Query: 1081 TYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNL 1140
            TYH SYWG YNE+M RDHYLSFPWCVYDKLMQIKE N+R+++RA RLA LD RF +ALNL
Sbjct: 1081 TYHHSYWGCYNEEMKRDHYLSFPWCVYDKLMQIKEKNLRKRERALRLATLD-RFGHALNL 1129

Query: 1141 G 1142
            G
Sbjct: 1141 G 1129

[Close]
BLAST of Moc09g31840 vs. NCBI nr
Match: XP_022943173.1 (RNA-dependent RNA polymerase 1-like isoform X2 [Cucurbita moschata] >XP_022943174.1 RNA-dependent RNA polymerase 1-like isoform X2 [Cucurbita moschata] >XP_022943175.1 RNA-dependent RNA polymerase 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1908.3 bits (4942), Expect = 0.0e+00
Identity = 938/1140 (82.28%), Postives = 1028/1140 (90.18%), Query Frame = 0 

Query: 1    MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE 60
            MGKTVHISGFP+  TAD+V+S+LE RTG+GTVYA+K+R PK+GGSR+YA VQF G+ +AE
Sbjct: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFIGAAQAE 60

Query: 61   LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW 120
            LIISLAN   QRLWYG+SYLKAR ADVDI+PKPRTY+HTLEDLTLCFGCQVSSEKF VLW
Sbjct: 61   LIISLAN---QRLWYGSSYLKARAADVDIVPKPRTYVHTLEDLTLCFGCQVSSEKFHVLW 120

Query: 121  EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP 180
            EG   LVTFG  MRKMNF L HNFVEYRF+LSYENIW+I+LH  +HQSMK L+IQLYGAP
Sbjct: 121  EGDVELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAP 180

Query: 181  WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLKLHNCREL 240
             IYKKV  SSG  Q+FDDPL N+FKEVPDDQWVR+ DFTPS+ +GQSSSLCLKL N R+L
Sbjct: 181  RIYKKVAPSSG--QIFDDPLFNFFKEVPDDQWVRTADFTPSNSVGQSSSLCLKLPNGRQL 240

Query: 241  PNFGQNFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGC 300
            PNF ++FAYY+E EDEF+LVDGGN FSCS DLVP+VDSRP++ LPY+IIFK+N LVQ+GC
Sbjct: 241  PNFRRHFAYYEEFEDEFKLVDGGNSFSCSDDLVPVVDSRPNVLLPYEIIFKVNVLVQNGC 300

Query: 301  ISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSP 360
            I+GP+LDT FY LVDP RI++E+VE+AL++LFHLKEC Y+P S+LTEQYKKY + P NSP
Sbjct: 301  IAGPSLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSP 360

Query: 361  AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRS 420
            AI+LD GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRD+DNFLRVSFVDEEWDKMRS
Sbjct: 361  AIALDDGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRS 420

Query: 421  IDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPG 480
             DLLPR +S+I++ KT+IY+RILSVLKNGI IG K FKFLAFSSSQLR+NSLWMFA+RPG
Sbjct: 421  TDLLPRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPG 480

Query: 481  LDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 540
            LDA  IR WMGDFR IKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV
Sbjct: 481  LDAAVIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 540

Query: 541  FSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKF 600
            FSDGIGKISSDFAK+V++KC L AFTPSAFQIRYGGYKGVVAVDP SS KLSLRKSMCKF
Sbjct: 541  FSDGIGKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKF 600

Query: 601  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ 660
            ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGV+DEVFEKKQ EA+EQLDAILTDPLKAQ
Sbjct: 601  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQ 660

Query: 661  EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM 720
            EALELM+PGENTN+LKEMLKCGYKP+VEPYLSMMLQ FR SKLL+LRTKSR+FIPNGRAM
Sbjct: 661  EALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAM 720

Query: 721  MGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPG 780
            MGCLDETG+LEYGQVFVQ+S  +   +S  TSAF++S SE  + I GNV VAKNPCLHPG
Sbjct: 721  MGCLDETGTLEYGQVFVQISSVRHRHIS-DTSAFDMSGSEDHLVIVGNVTVAKNPCLHPG 780

Query: 781  DVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 840
            DVRVL AVNVP LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP
Sbjct: 781  DVRVLNAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 840

Query: 841  MDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLA 900
            MDYTPAPP QLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKE FKARS+PCI LA
Sbjct: 841  MDYTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELA 900

Query: 901  KLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTS 960
            KLFSIAVDFPKTGVPAIIP  L VKEFPDFMEKPD+PSYESKNVIGKLFRAVK IAP  S
Sbjct: 901  KLFSIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKGIAPNIS 960

Query: 961  HISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGN 1020
            +I  FTR+VA +CYDSDME EG+EDYV+DAIYHK  YDYKLGNLLDYYGIKSE+EI SGN
Sbjct: 961  YIRSFTRDVAMRCYDSDMETEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGN 1020

Query: 1021 IMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHV 1080
            IM MSKSFT++RDAEAINLA RSLRKEARTWFN +ESGPD    SG DDLFAKASAWYHV
Sbjct: 1021 IMRMSKSFTRRRDAEAINLAARSLRKEARTWFNTKESGPD----SGSDDLFAKASAWYHV 1080

Query: 1081 TYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNL 1140
            TYH SYWGSYN+ M RDHYLSFPWCVY KLMQ+KENN+RR+++ASRLA LD RF   LNL
Sbjct: 1081 TYHHSYWGSYNDGMKRDHYLSFPWCVYHKLMQVKENNLRRREKASRLATLD-RFSRVLNL 1128

[Close]
BLAST of Moc09g31840 vs. NCBI nr
Match: XP_022943172.1 (RNA-dependent RNA polymerase 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1908.3 bits (4942), Expect = 0.0e+00
Identity = 938/1140 (82.28%), Postives = 1028/1140 (90.18%), Query Frame = 0 

Query: 1    MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE 60
            MGKTVHISGFP+  TAD+V+S+LE RTG+GTVYA+K+R PK+GGSR+YA VQF G+ +AE
Sbjct: 15   MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFIGAAQAE 74

Query: 61   LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW 120
            LIISLAN   QRLWYG+SYLKAR ADVDI+PKPRTY+HTLEDLTLCFGCQVSSEKF VLW
Sbjct: 75   LIISLAN---QRLWYGSSYLKARAADVDIVPKPRTYVHTLEDLTLCFGCQVSSEKFHVLW 134

Query: 121  EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP 180
            EG   LVTFG  MRKMNF L HNFVEYRF+LSYENIW+I+LH  +HQSMK L+IQLYGAP
Sbjct: 135  EGDVELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAP 194

Query: 181  WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLKLHNCREL 240
             IYKKV  SSG  Q+FDDPL N+FKEVPDDQWVR+ DFTPS+ +GQSSSLCLKL N R+L
Sbjct: 195  RIYKKVAPSSG--QIFDDPLFNFFKEVPDDQWVRTADFTPSNSVGQSSSLCLKLPNGRQL 254

Query: 241  PNFGQNFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGC 300
            PNF ++FAYY+E EDEF+LVDGGN FSCS DLVP+VDSRP++ LPY+IIFK+N LVQ+GC
Sbjct: 255  PNFRRHFAYYEEFEDEFKLVDGGNSFSCSDDLVPVVDSRPNVLLPYEIIFKVNVLVQNGC 314

Query: 301  ISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSP 360
            I+GP+LDT FY LVDP RI++E+VE+AL++LFHLKEC Y+P S+LTEQYKKY + P NSP
Sbjct: 315  IAGPSLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSP 374

Query: 361  AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRS 420
            AI+LD GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRD+DNFLRVSFVDEEWDKMRS
Sbjct: 375  AIALDDGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRS 434

Query: 421  IDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPG 480
             DLLPR +S+I++ KT+IY+RILSVLKNGI IG K FKFLAFSSSQLR+NSLWMFA+RPG
Sbjct: 435  TDLLPRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPG 494

Query: 481  LDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 540
            LDA  IR WMGDFR IKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV
Sbjct: 495  LDAAVIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 554

Query: 541  FSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKF 600
            FSDGIGKISSDFAK+V++KC L AFTPSAFQIRYGGYKGVVAVDP SS KLSLRKSMCKF
Sbjct: 555  FSDGIGKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKF 614

Query: 601  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ 660
            ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGV+DEVFEKKQ EA+EQLDAILTDPLKAQ
Sbjct: 615  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQ 674

Query: 661  EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM 720
            EALELM+PGENTN+LKEMLKCGYKP+VEPYLSMMLQ FR SKLL+LRTKSR+FIPNGRAM
Sbjct: 675  EALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAM 734

Query: 721  MGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPG 780
            MGCLDETG+LEYGQVFVQ+S  +   +S  TSAF++S SE  + I GNV VAKNPCLHPG
Sbjct: 735  MGCLDETGTLEYGQVFVQISSVRHRHIS-DTSAFDMSGSEDHLVIVGNVTVAKNPCLHPG 794

Query: 781  DVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 840
            DVRVL AVNVP LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP
Sbjct: 795  DVRVLNAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 854

Query: 841  MDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLA 900
            MDYTPAPP QLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKE FKARS+PCI LA
Sbjct: 855  MDYTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELA 914

Query: 901  KLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTS 960
            KLFSIAVDFPKTGVPAIIP  L VKEFPDFMEKPD+PSYESKNVIGKLFRAVK IAP  S
Sbjct: 915  KLFSIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKGIAPNIS 974

Query: 961  HISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGN 1020
            +I  FTR+VA +CYDSDME EG+EDYV+DAIYHK  YDYKLGNLLDYYGIKSE+EI SGN
Sbjct: 975  YIRSFTRDVAMRCYDSDMETEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGN 1034

Query: 1021 IMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHV 1080
            IM MSKSFT++RDAEAINLA RSLRKEARTWFN +ESGPD    SG DDLFAKASAWYHV
Sbjct: 1035 IMRMSKSFTRRRDAEAINLAARSLRKEARTWFNTKESGPD----SGSDDLFAKASAWYHV 1094

Query: 1081 TYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNL 1140
            TYH SYWGSYN+ M RDHYLSFPWCVY KLMQ+KENN+RR+++ASRLA LD RF   LNL
Sbjct: 1095 TYHHSYWGSYNDGMKRDHYLSFPWCVYHKLMQVKENNLRRREKASRLATLD-RFSRVLNL 1142

[Close]
BLAST of Moc09g31840 vs. ExPASy Swiss-Prot
Match: Q9LQV2 (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1)

HSP 1 Score: 1422.1 bits (3680), Expect = 0.0e+00
Identity = 712/1138 (62.57%), Postives = 871/1138 (76.54%), Query Frame = 0 

Query: 1    MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE 60
            MGKT+ + GFP GV+A+ V+ +LE  TG GTVYA+K+R+PKKGG R+YA VQFT  R   
Sbjct: 1    MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTR 60

Query: 61   LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW 120
            LII+ A    +RL+YG SYLKA E + DI+PKPR  +HT+  L + FGCQVS++KF  LW
Sbjct: 61   LIITAA---AERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLW 120

Query: 121  EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP 180
              +DV V+FG GMRK++F  S    +YR ELSYENIW+I+LH  + +S K+LVIQ+ GAP
Sbjct: 121  SAQDVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAP 180

Query: 181  WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLKLHNCREL 240
             I++K +       +F   +++++ +  D+QW+R+TDFT SSCIGQS++ CL+L     +
Sbjct: 181  KIFEKEDQP--INLLFG--IMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNV 240

Query: 241  PNFGQNFAYYKETEDEFRLVDGGNGFSCSAD-LVPMVDSRPDIFLPYKIIFKINALVQHG 300
            P+F +NFA Y E      L++ G+ +S +A+ LVP+VD  P   LP++I+FK+N LVQ+ 
Sbjct: 241  PDFRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNA 300

Query: 301  CISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRP--P 360
            C+SGPALD  FY L++ ++     ++H L++LFHL EC Y+P  WL ++YKK++ +   P
Sbjct: 301  CLSGPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLP 360

Query: 361  NSPAISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDK 420
             SP ISLD GLVY+ RVQ+TP +VYF GPEVNVSNRVLRH+S+ I+NFLRVSFVDE+ +K
Sbjct: 361  LSPTISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEK 420

Query: 421  MRSIDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFAT 480
            +RS+DL PR+S+    R+T++Y RI SVL++GIVIG K F+FLAFSSSQLR+NS WMFA 
Sbjct: 421  VRSMDLSPRSST---QRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAP 480

Query: 481  RPGLDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEV 540
               + A  IRAWMGDF  I+N AKYAARLGQSF SS ETL+V   E E+IPD+E+     
Sbjct: 481  IDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGT 540

Query: 541  KYVFSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSM 600
            +YVFSDGIGKIS++FA+KV+ KCGL  F+PSAFQIRYGGYKGVVAVDP SSKKLSLRKSM
Sbjct: 541  RYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSM 600

Query: 601  CKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPL 660
             KFES+NTKLDVL +SKYQPC++NRQLITLLSTLGV D VFEKKQRE V++LDAILT PL
Sbjct: 601  SKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPL 660

Query: 661  KAQEALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNG 720
            +A EAL LMAPGENTN+LK ++ CGYKP+ EP+LSMMLQ FRASKLL+LRTK+R+FI  G
Sbjct: 661  EAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGG 720

Query: 721  RAMMGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCL 780
            R+MMGCLDET +LEYGQV VQ S   +                +R  I G VVVAKNPCL
Sbjct: 721  RSMMGCLDETRTLEYGQVVVQYSDPMR--------------PGRRFIITGPVVVAKNPCL 780

Query: 781  HPGDVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQ 840
            HPGDVRVL+AVNVP L HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD EL+PPR 
Sbjct: 781  HPGDVRVLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRT 840

Query: 841  IPPMDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCI 900
              PMDYTP P   LD DVTIE+V+EYF NY+VNDSLGIIANAHTAFADKE  KA S PCI
Sbjct: 841  SEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCI 900

Query: 901  NLAKLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAP 960
             LAK FS AVDFPKTGV A+IP  LYVKE+PDFMEKPDKP+YESKNVIGKLFR VK+ AP
Sbjct: 901  ELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAP 960

Query: 961  TTSHISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEIL 1020
                I  FT +VA + YD DME++G+E+YVD+A Y K NYD+KLGNL+DYYGIK+EAEIL
Sbjct: 961  PLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEIL 1020

Query: 1021 SGNIMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAW 1080
            SG IM MSKSFTK+RDAE+I  A+R+LRKE  + FN  E   +           AKASAW
Sbjct: 1021 SGGIMRMSKSFTKRRDAESIGRAVRALRKETLSLFNASEEEENES---------AKASAW 1080

Query: 1081 YHVTYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFR 1136
            YHVTYH SYWG YNE +NRDH+LSF WCVYDKL++IK+ N+ R+QR   L  LD   R
Sbjct: 1081 YHVTYHSSYWGLYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRRQRQETLERLDHVLR 1105

[Close]
BLAST of Moc09g31840 vs. ExPASy Swiss-Prot
Match: Q0DXS3 (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2)

HSP 1 Score: 983.8 bits (2542), Expect = 1.7e-285
Identity = 496/744 (66.67%), Postives = 589/744 (79.17%), Query Frame = 0 

Query: 381  VYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRSIDLLPRTSSTIKDRKTEIYK 440
            VYF GPE+NVSNRV+R+FS DI+NFLR+SFVDE+ +K+R+ DL PR++S     +T +YK
Sbjct: 9    VYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASGHDANRTALYK 68

Query: 441  RILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPGLDAEDIRAWMGDFRQIKNPA 500
            R+LSVL +GI IGGK F+FLAFSSSQLRDNS WMFA+R GL A DIR WMGDFR I+N A
Sbjct: 69   RVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNIRNVA 128

Query: 501  KYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGIGKISSDFAKKVSAKC 560
            KYAARLGQSF SSTETL V ++E E I DI+      ++VFSDGIGKISS FA +V+ KC
Sbjct: 129  KYAARLGQSFSSSTETLKVQKYEVEEISDIK---NGTQHVFSDGIGKISSAFANEVAMKC 188

Query: 561  GLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKFESDNTKLDVLGYSKYQPCFL 620
             LK F PSAFQIRYGGYKGVVAVDP S  KLSLRKSM KF+SDN  +DVL YSKYQP FL
Sbjct: 189  NLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQPGFL 248

Query: 621  NRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQEALELMAPGENTNVLKEMLK 680
            NRQLITLLSTLGVRD VFE+KQ EAV QL+ ++TDP  A EA+ELM  GE TN +KE+L 
Sbjct: 249  NRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVKELLL 308

Query: 681  CGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAMMGCLDETGSLEYGQVFVQVS 740
            CGY+P+ EPYLSM+LQ FRASKLL+L+TKSR+ IP GRAMMGCLDET +L+YGQVF++  
Sbjct: 309  CGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVFIR-- 368

Query: 741  GAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPGDVRVLKAVNVPRLYHMVDCV 800
                      TS  N      R  + G VV+AKNPCLHPGD+R+L AV+VP L+HM +CV
Sbjct: 369  ---------ATSGVN---DNDRFTVTGKVVIAKNPCLHPGDIRILHAVDVPVLHHMFNCV 428

Query: 801  VFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPAPPTQLDRDVTIEDV 860
            VFPQ+G RPHPNECSGSDLDGDIYFV WD  LIPPR + PMDYTPAP   LD DVTIE+V
Sbjct: 429  VFPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDVTIEEV 488

Query: 861  QEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLAKLFSIAVDFPKTGVPAIIPP 920
            +EYF NY+VN+SLG+IANAH  FADKE  KA SSPCI LAKLFSIAVDFPKTGVPA+IPP
Sbjct: 489  EEYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPP 548

Query: 921  ELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTSHISLFTREVARQCYDSDMEI 980
            EL+VKE+PDFMEK DK +YESK VIGKL+R +K   P   HI  FTREVAR+ YD+DM +
Sbjct: 549  ELHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTP---HIKHFTREVARRSYDTDMIV 608

Query: 981  EGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGNIMTMSKSFTKKRDAEAINLA 1040
            +GYEDY+ +A+  K+ YD+KLGNL+D+YGIKSEAEI+SG I+ M+K+FTKK DA+AI LA
Sbjct: 609  DGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRLA 668

Query: 1041 IRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHVTYHPSYWGSYNEDMNRDHYL 1100
            +RSLRKEAR+ F+E       D+  G D   AKASAWYHVTYHP +WG YNE   R H++
Sbjct: 669  VRSLRKEARSRFSEMSL---DDNGHGHDASEAKASAWYHVTYHPEFWGCYNEGYERPHFI 728

Query: 1101 SFPWCVYDKLMQIKENN--VRRKQ 1123
            SFPWC+Y+KL++IK+    VR+ Q
Sbjct: 729  SFPWCIYEKLLRIKQRRKFVRKMQ 729

[Close]
BLAST of Moc09g31840 vs. ExPASy Swiss-Prot
Match: O82504 (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1)

HSP 1 Score: 764.2 bits (1972), Expect = 2.1e-219
Identity = 464/1156 (40.14%), Postives = 675/1156 (58.39%), Query Frame = 0 

Query: 4    TVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGS-RLYAFVQFTGSREAELI 63
            TV IS  P  + AD +  +LE   G  TV+AL+I   +     R +A VQFT        
Sbjct: 11   TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKSRA 70

Query: 64   ISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEK-FCVL-- 123
              L++Q   +L + T  L+  EA  DIIP+P      L+D+ L  G   S EK FC L  
Sbjct: 71   QLLSSQ--SKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEK 130

Query: 124  WEG-RDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIE-----LHHSRHQSMKYLV 183
            W+G R  ++T     R++ F +  +   Y+ E+ +E+I  IE     ++    +   +L+
Sbjct: 131  WDGVRCWILT---EKRRVEFWVWESGDCYKIEVRFEDI--IETLSCCVNGDASEIDAFLL 190

Query: 184  IQLYGAPWIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLK 243
               YG P ++K+V     ++  F      + KE  D  W+R+TDF+ S  IG S+  CL+
Sbjct: 191  KLKYG-PKVFKRVTVHIATK--FKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLE 250

Query: 244  LHNCRELPNFGQNFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSR-PDIFLPYKIIFKI 303
            +HN   + +      YY+E       VD G  F+ +A +VP++++    +  PY+I+F++
Sbjct: 251  VHNGSTMLDIFSGLPYYREDTLSLTYVD-GKTFASAAQIVPLLNAAILGLEFPYEILFQL 310

Query: 304  NALVQHGCIS-GPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKK 363
            NALV    IS   A D     ++  R + +E     L +L       Y P  ++  Q + 
Sbjct: 311  NALVHAQKISLFAASDMELIKIL--RGMSLETALVILKKLHQQSSICYDPVFFVKTQMQS 370

Query: 364  YLRRPPNSPAIS----LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLR 423
             +++  +SPA +     +  ++  +R  +TP K+Y  GPE+  +N V+++F+  + +F+R
Sbjct: 371  VVKKMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMR 430

Query: 424  VSFVDEEWDKM--RSIDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSS 483
            V+FV+E+W K+   ++ +  +    +K  +T IY R+LS+L  GI +G K F+FLAFS+S
Sbjct: 431  VTFVEEDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSAS 490

Query: 484  QLRDNSLWMFATRPGLDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHERE 543
            QLR NS+WMFA+   + AEDIR WMG FR+I++ +K AAR+GQ F +S +TL V   + E
Sbjct: 491  QLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVE 550

Query: 544  IIPDIEVQHGEVKYVFSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDP 603
             IPDIEV      Y FSDGIGKIS  FAK+V+ KCGL +  PSAFQIRYGGYKGV+AVD 
Sbjct: 551  QIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGVIAVDR 610

Query: 604  YSSKKLSLRKSMCKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREA 663
             S +KLSLR SM KF+S+N  L+V  +++  PCFLNR++I LLSTLG+ D +FE  Q   
Sbjct: 611  SSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVH 670

Query: 664  VEQLDAILTDPLKAQEALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLD 723
            +  L  +L D   A   L+ ++   + N+L +ML  GY P+ EPYLSMML+    S+L +
Sbjct: 671  LSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSE 730

Query: 724  LRTKSRMFIPNGRAMMGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAI 783
            L+++ R+ +P GR ++GC+DE G LEYGQV+V+V+  K  + S   S F     E  V I
Sbjct: 731  LKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVI 790

Query: 784  EGNVVVAKNPCLHPGDVRVLKAVNVPRLYH--MVDCVVFPQKGSRPHPNECSGSDLDGDI 843
             G VVV KNPCLHPGD+RVL A+          +DC++FPQKG RPHPNECSG DLDGD 
Sbjct: 791  -GKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQ 850

Query: 844  YFVCWDTELIPPRQIPPMDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAF 903
            +FV WD ++IP    PPMDY  + P  +D DVT+E++ ++FV+YM++D+LG+I+ AH   
Sbjct: 851  FFVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVH 910

Query: 904  ADKELFKARSSPCINLAKLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKN 963
            AD++  KARS  C+ LA L S AVDF KTG PA +P  L  +EFPDF+E+ +KP+Y S++
Sbjct: 911  ADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISES 970

Query: 964  VIGKLFRAVKDIAPTTSHISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGN 1023
            V GKL+RAVK         +     VA   YD  +E  G+E +++ A  H++ Y  KL +
Sbjct: 971  VFGKLYRAVKSSLAQRKPEAESEDTVA---YDVTLEEAGFESFIETAKAHRDMYGEKLTS 1030

Query: 1024 LLDYYGIKSEAEILSGNIMTMSKSFTKKRD-------AEAINLAIRSLRKEARTWFNERE 1083
            L+ YYG  +E EIL+G + T  K     RD        + I L+++ L KEA  WF   +
Sbjct: 1031 LMIYYGAANEEEILTGILKT--KEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWF--EK 1090

Query: 1084 SGPDSDSVSGLDDLFAKASAWYHVTYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKEN 1133
            S  D      L      ASAWY+VTY+P      N    +  +LSFPW V D L+ IK  
Sbjct: 1091 SCEDEQQKKKL------ASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIKAE 1132

[Close]
BLAST of Moc09g31840 vs. ExPASy Swiss-Prot
Match: Q7XM31 (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1)

HSP 1 Score: 721.5 bits (1861), Expect = 1.5e-206
Identity = 427/1143 (37.36%), Postives = 649/1143 (56.78%), Query Frame = 0 

Query: 4    TVHISGFPAGVTADAVRSYLEGRTGV-GTVYALKIREPKKGG-SRLYAFVQFTGSREAEL 63
            ++ +S  P    A  + ++ +    V G  +A +I    +G  SR +  VQF  +  A  
Sbjct: 11   SLRVSNIPPSAVAAELLAFFDSAVAVAGGAFACEIAAAHRGWLSRGHGTVQFGSAAAAAA 70

Query: 64   IISLANQ-RIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKF--CV 123
               LA+  R+ R  +  + L    + VD++P+            L  G +V+   F    
Sbjct: 71   AAGLASSGRLPR--FLGALLSVSPSPVDLLPRASDLSLRAAGAGLVVGDRVAERVFEAAD 130

Query: 124  LWEGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYG 183
             W+G  V      G R+++  L H+   Y+ E+ +E++   +        M  +++QL  
Sbjct: 131  AWDG--VRAEVIPGKRRVDLYLEHDSQRYKLEVLFEDM--KDCLGCTLDGMGAILLQLNY 190

Query: 184  APWIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLKLHNCR 243
            AP I+  +   + + +  DD   +  KE     WVR+ DFTP+   G+ S+L LKL    
Sbjct: 191  APRIHTAISGPAVNSRFMDD-RFHACKEDAKFSWVRALDFTPNYSFGRCSTLVLKLGKSA 250

Query: 244  ELPNFGQNFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQH 303
             + +  ++  +     +    ++  +G   S+++VP+V    D  +PY+++F++N+L+  
Sbjct: 251  LVSDILKSLPFSGNLGE--LTMNSMDGVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHM 310

Query: 304  GCISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPN 363
            G I    ++   +  +  + + ++      +++  L+   Y P  ++  Q + Y  +  +
Sbjct: 311  GKIVAKHVNADLFKAL--QELPVDVSRRIFEKMHKLESTCYGPLQFI--QQEAYSMKRSH 370

Query: 364  SPAISLDA------GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVD 423
            +  +S +        L+   RV ITP K++  GPE  V+N V++H S    +F+RV+FVD
Sbjct: 371  NVLLSNEGEGEGERKLMKCYRVNITPSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVD 430

Query: 424  EEWDKMRSIDLLPRTSSTI--KDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDN 483
            E+W K+ S  +  R       K  KT +Y RILS+LK G  IG K F+FLAFS+SQLR N
Sbjct: 431  EDWSKLSSNAISARIEQGFFSKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGN 490

Query: 484  SLWMFATRPGLDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDI 543
            S+WMFA+   L+A  IR WMG F  I++ +K AAR+GQ F SS +T  V R + E+IPDI
Sbjct: 491  SVWMFASNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEVIPDI 550

Query: 544  EVQHGEVKYVFSDGIGKISSDFAKKVSAKCGLKAFT-PSAFQIRYGGYKGVVAVDPYSSK 603
            E+     KY+FSDGIGKIS  FAK+V+   GL     PSAFQIRYGGYKGV+A+DP SS 
Sbjct: 551  EITTDGSKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSSI 610

Query: 604  KLSLRKSMCKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQL 663
             LSLR SM KFES++  L++  +SK QPC++NR++I+LLSTLG+RDE+F   Q++ + + 
Sbjct: 611  DLSLRPSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRET 670

Query: 664  DAILTDPLKAQEALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTK 723
            + +LT+   A   L  +  G  T    +ML  GY+P+ EPYLSM+L+A + ++L D+RT+
Sbjct: 671  EEMLTNKEVALSVLGKLG-GSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTR 730

Query: 724  SRMFIPNGRAMMGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNV 783
             ++ +P GR ++GCLDETG LEYGQV+++++   +       S F  +   +   + G V
Sbjct: 731  CKIHVPKGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYF-YNDDGKTATVVGKV 790

Query: 784  VVAKNPCLHPGDVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWD 843
             + KNPCLHPGD+RVL+A+  P L  MVDC+VFPQ+G RPHPNECSG DLDGD+YF+ WD
Sbjct: 791  AITKNPCLHPGDIRVLEAIYDPDLVGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWD 850

Query: 844  TELIPPRQIPPMDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELF 903
             +LIP +   PMDYT   P  +D  VT+E++Q++FV+YM+NDSLG I+ AH   AD+   
Sbjct: 851  DKLIPEKVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPL 910

Query: 904  KARSSPCINLAKLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLF 963
            KARS  C+ LA L S+AVDF KTG PA +P  L  +E+PDFME+ +KP Y S  V+GKL+
Sbjct: 911  KARSPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLY 970

Query: 964  RAVKDIAPTTSHISLFTREVAR--QCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDY 1023
            R+       +      +   A+    YD D+E+ G ++++  A  +   Y+ KL  L++Y
Sbjct: 971  RSAMGHMEKSGDSGALSSSSAQPSPTYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNY 1030

Query: 1024 YGIKSEAEILSGNIMTMSKSFTKKRD-------AEAINLAIRSLRKEARTWFNERESGPD 1083
            Y  + E EIL+GNI   +K    KRD        + I  A+ +L +EAR W        D
Sbjct: 1031 YRAELEDEILTGNI--RNKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWLLSSRKEED 1090

Query: 1084 SDSVSGLDDLFAKASAWYHVTYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRR 1124
            +  +         ASAWY VTYHP       +      + SFPW   D L+ IK ++  R
Sbjct: 1091 ASRM---------ASAWYRVTYHP-------DRRRGKRFWSFPWIACDNLLAIKASSQLR 1120

[Close]
BLAST of Moc09g31840 vs. ExPASy Swiss-Prot
Match: Q9SG02 (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 1.1e-169
Identity = 427/1188 (35.94%), Postives = 610/1188 (51.35%), Query Frame = 0 

Query: 5    VHISGFPAGVTADAVRSYLEGRTGVGTVYALK----------------------IREPKK 64
            V I GF    TA  +  YLE   G+     LK                      I E KK
Sbjct: 15   VSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTSWTPPGSYPNFEIADTSNIPSIDEYKK 74

Query: 65   GGSRLYAFVQFTGSREAELIISLANQRIQRLWYGTSYLKAREADVDIIPK---------P 124
                 +AFV F     A   +  A Q           L  +   V + PK          
Sbjct: 75   --VEPHAFVHFAVFESAGRAMDAAGQ-------CNLILDGQPLKVSLGPKNPYSLNQRRR 134

Query: 125  RTYMHTLEDLTLCFGCQVSSEKFCVLW--EGRDVLVTFGFGMRKMNFRLSHNF------- 184
             T  + L  +TL  G  VS + F V W  EG D LV       K  FR S  F       
Sbjct: 135  TTVPYKLAGITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVM 194

Query: 185  -----VEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAPWIYKKVESSSGSRQVFDDP 244
                  +Y+ EL   +I  +  + + H  +  L++QL  +P ++ +         V  D 
Sbjct: 195  HAVINCDYKLELLVRDIQTVRQYKTLHGFV--LILQLASSPRVWYRTADDDIYDTVPGDL 254

Query: 245  LLNYFKEVPDDQWVRSTDFTPSSCIGQSSS--LCLKLHNCRELPNFGQNFAYYKETEDEF 304
            L +      DD W+R+TDFT    IG+  S  + +      +L      F   +  E+  
Sbjct: 255  LDD------DDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERV 314

Query: 305  RLVDGGNGFSCSADLVPMVDSRPDIF----LPYKIIFKINALVQHGCISGPALDTSFYHL 364
            R         C  +  P+ D    I     + ++I+F +N+++  G  +   L   F+ L
Sbjct: 315  RWPPRIRNEPCFGE--PVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDL 374

Query: 365  V--DPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSPAISLDAGLVYV 424
            +   P+ + I  ++H    L   K   +  Y  L    +   + P    +      +  +
Sbjct: 375  LRNQPKDVNIASLKH----LCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEI 434

Query: 425  RRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRSIDLLPRTSSTI 484
            RR+ ITP + Y   PEV +SNRVLR +    + FLRV+F+DE    + S  L    +  +
Sbjct: 435  RRLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIV 494

Query: 485  KD-------RKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPGLDAE 544
            KD       +KT ++KR+ S+L +G  + G+ + FLAFS++QLRD S W FA        
Sbjct: 495  KDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVS 554

Query: 545  DIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREI-IPDIEVQHGEVKYVFSD 604
            DI+ WMG F+  KN AK AAR+G  F S+  T+ V  HE +  +PDIE ++G   YVFSD
Sbjct: 555  DIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIE-RNG---YVFSD 614

Query: 605  GIGKISSDFAKKVSAKCGLKA-FTPSAFQIRYGGYKGVVAVDPYSSK--KLSLRKSMCKF 664
            GIG I+ D A +V  K  L   ++P A+QIRY G+KGVVA  P  S   +L+LR SM KF
Sbjct: 615  GIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKF 674

Query: 665  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ 724
             S +T L++  ++++QP FLNRQ+ITLLS LGV DE+F   Q   + +L+ IL D   A 
Sbjct: 675  FSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAF 734

Query: 725  EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM 784
            E L      E  N    ML  G+KP  EP+L  ML + R ++L  LR KSR+F+ +GR +
Sbjct: 735  EVLTASC-AEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWL 794

Query: 785  MGCLDETGSLEYGQVFVQVSGAK-QSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHP 844
            MGCLDE G LE+GQ F+QVS    ++  S   S F  + ++  V ++G V +AKNPCLHP
Sbjct: 795  MGCLDEAGILEHGQCFIQVSKPSIENCFSKHGSRFKETKTDLEV-VKGYVAIAKNPCLHP 854

Query: 845  GDVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPP--RQ 904
            GDVR+L+AV+VP+L+HM DC++FPQKG RPH NE SGSDLDGD+YFV WD +LIPP  + 
Sbjct: 855  GDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKS 914

Query: 905  IPPMDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCI 964
             P M Y  A    L R V  +D+ ++F   + N+ LG I NAH   AD+  + A    C+
Sbjct: 915  YPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECL 974

Query: 965  NLAKLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAP 1024
             LA+L + AVDFPKTG    +P  L  K +PDFM K D  +Y+S  ++G+L+R VK++  
Sbjct: 975  LLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYD 1034

Query: 1025 TTSHISL-FTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEI 1084
              +  S   + + +   YD+ +EI G+ED + +A  HK  YD +L  LL  Y ++ E EI
Sbjct: 1035 EDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEI 1094

Query: 1085 LSGNIMTMSKSFTKKRD--AEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLF--- 1115
            ++G+I +M K  +KK+    E +  +  SL+KE R  F   E+ PD +++S  +      
Sbjct: 1095 VTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVF--EETIPDHENLSEEEKNILYE 1154

[Close]
BLAST of Moc09g31840 vs. ExPASy TrEMBL
Match: A0A6J1CYE0 (RNA-dependent RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111015923 PE=3 SV=1)

HSP 1 Score: 2327.0 bits (6029), Expect = 0.0e+00
Identity = 1142/1142 (100.00%), Postives = 1142/1142 (100.00%), Query Frame = 0 

Query: 1    MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE 60
            MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE
Sbjct: 1    MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE 60

Query: 61   LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW 120
            LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW
Sbjct: 61   LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW 120

Query: 121  EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP 180
            EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP
Sbjct: 121  EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP 180

Query: 181  WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLKLHNCREL 240
            WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLKLHNCREL
Sbjct: 181  WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLKLHNCREL 240

Query: 241  PNFGQNFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGC 300
            PNFGQNFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGC
Sbjct: 241  PNFGQNFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGC 300

Query: 301  ISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSP 360
            ISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSP
Sbjct: 301  ISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSP 360

Query: 361  AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRS 420
            AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRS
Sbjct: 361  AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRS 420

Query: 421  IDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPG 480
            IDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPG
Sbjct: 421  IDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPG 480

Query: 481  LDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 540
            LDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV
Sbjct: 481  LDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 540

Query: 541  FSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKF 600
            FSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKF
Sbjct: 541  FSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKF 600

Query: 601  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ 660
            ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ
Sbjct: 601  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ 660

Query: 661  EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM 720
            EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM
Sbjct: 661  EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM 720

Query: 721  MGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPG 780
            MGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPG
Sbjct: 721  MGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPG 780

Query: 781  DVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 840
            DVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP
Sbjct: 781  DVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 840

Query: 841  MDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLA 900
            MDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLA
Sbjct: 841  MDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLA 900

Query: 901  KLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTS 960
            KLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTS
Sbjct: 901  KLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTS 960

Query: 961  HISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGN 1020
            HISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGN
Sbjct: 961  HISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGN 1020

Query: 1021 IMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHV 1080
            IMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHV
Sbjct: 1021 IMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHV 1080

Query: 1081 TYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNL 1140
            TYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNL
Sbjct: 1081 TYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNL 1140

Query: 1141 GH 1143
            GH
Sbjct: 1141 GH 1142

[Close]
BLAST of Moc09g31840 vs. ExPASy TrEMBL
Match: A0A6J1D0H1 (RNA-dependent RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111015923 PE=3 SV=1)

HSP 1 Score: 2239.9 bits (5803), Expect = 0.0e+00
Identity = 1109/1142 (97.11%), Postives = 1109/1142 (97.11%), Query Frame = 0 

Query: 1    MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE 60
            MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE
Sbjct: 1    MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE 60

Query: 61   LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW 120
            LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW
Sbjct: 61   LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW 120

Query: 121  EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP 180
            EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP
Sbjct: 121  EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP 180

Query: 181  WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLKLHNCREL 240
            WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQW                            
Sbjct: 181  WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQW---------------------------- 240

Query: 241  PNFGQNFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGC 300
                 NFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGC
Sbjct: 241  -----NFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGC 300

Query: 301  ISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSP 360
            ISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSP
Sbjct: 301  ISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSP 360

Query: 361  AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRS 420
            AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRS
Sbjct: 361  AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRS 420

Query: 421  IDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPG 480
            IDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPG
Sbjct: 421  IDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPG 480

Query: 481  LDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 540
            LDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV
Sbjct: 481  LDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 540

Query: 541  FSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKF 600
            FSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKF
Sbjct: 541  FSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKF 600

Query: 601  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ 660
            ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ
Sbjct: 601  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ 660

Query: 661  EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM 720
            EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM
Sbjct: 661  EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM 720

Query: 721  MGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPG 780
            MGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPG
Sbjct: 721  MGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPG 780

Query: 781  DVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 840
            DVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP
Sbjct: 781  DVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 840

Query: 841  MDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLA 900
            MDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLA
Sbjct: 841  MDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLA 900

Query: 901  KLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTS 960
            KLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTS
Sbjct: 901  KLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTS 960

Query: 961  HISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGN 1020
            HISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGN
Sbjct: 961  HISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGN 1020

Query: 1021 IMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHV 1080
            IMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHV
Sbjct: 1021 IMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHV 1080

Query: 1081 TYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNL 1140
            TYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNL
Sbjct: 1081 TYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNL 1109

Query: 1141 GH 1143
            GH
Sbjct: 1141 GH 1109

[Close]
BLAST of Moc09g31840 vs. ExPASy TrEMBL
Match: A0A6J1FXH5 (RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447985 PE=3 SV=1)

HSP 1 Score: 1908.3 bits (4942), Expect = 0.0e+00
Identity = 938/1140 (82.28%), Postives = 1028/1140 (90.18%), Query Frame = 0 

Query: 1    MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE 60
            MGKTVHISGFP+  TAD+V+S+LE RTG+GTVYA+K+R PK+GGSR+YA VQF G+ +AE
Sbjct: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFIGAAQAE 60

Query: 61   LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW 120
            LIISLAN   QRLWYG+SYLKAR ADVDI+PKPRTY+HTLEDLTLCFGCQVSSEKF VLW
Sbjct: 61   LIISLAN---QRLWYGSSYLKARAADVDIVPKPRTYVHTLEDLTLCFGCQVSSEKFHVLW 120

Query: 121  EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP 180
            EG   LVTFG  MRKMNF L HNFVEYRF+LSYENIW+I+LH  +HQSMK L+IQLYGAP
Sbjct: 121  EGDVELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAP 180

Query: 181  WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLKLHNCREL 240
             IYKKV  SSG  Q+FDDPL N+FKEVPDDQWVR+ DFTPS+ +GQSSSLCLKL N R+L
Sbjct: 181  RIYKKVAPSSG--QIFDDPLFNFFKEVPDDQWVRTADFTPSNSVGQSSSLCLKLPNGRQL 240

Query: 241  PNFGQNFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGC 300
            PNF ++FAYY+E EDEF+LVDGGN FSCS DLVP+VDSRP++ LPY+IIFK+N LVQ+GC
Sbjct: 241  PNFRRHFAYYEEFEDEFKLVDGGNSFSCSDDLVPVVDSRPNVLLPYEIIFKVNVLVQNGC 300

Query: 301  ISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSP 360
            I+GP+LDT FY LVDP RI++E+VE+AL++LFHLKEC Y+P S+LTEQYKKY + P NSP
Sbjct: 301  IAGPSLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSP 360

Query: 361  AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRS 420
            AI+LD GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRD+DNFLRVSFVDEEWDKMRS
Sbjct: 361  AIALDDGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRS 420

Query: 421  IDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPG 480
             DLLPR +S+I++ KT+IY+RILSVLKNGI IG K FKFLAFSSSQLR+NSLWMFA+RPG
Sbjct: 421  TDLLPRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPG 480

Query: 481  LDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 540
            LDA  IR WMGDFR IKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV
Sbjct: 481  LDAAVIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 540

Query: 541  FSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKF 600
            FSDGIGKISSDFAK+V++KC L AFTPSAFQIRYGGYKGVVAVDP SS KLSLRKSMCKF
Sbjct: 541  FSDGIGKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKF 600

Query: 601  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ 660
            ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGV+DEVFEKKQ EA+EQLDAILTDPLKAQ
Sbjct: 601  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQ 660

Query: 661  EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM 720
            EALELM+PGENTN+LKEMLKCGYKP+VEPYLSMMLQ FR SKLL+LRTKSR+FIPNGRAM
Sbjct: 661  EALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAM 720

Query: 721  MGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPG 780
            MGCLDETG+LEYGQVFVQ+S  +   +S  TSAF++S SE  + I GNV VAKNPCLHPG
Sbjct: 721  MGCLDETGTLEYGQVFVQISSVRHRHIS-DTSAFDMSGSEDHLVIVGNVTVAKNPCLHPG 780

Query: 781  DVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 840
            DVRVL AVNVP LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP
Sbjct: 781  DVRVLNAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 840

Query: 841  MDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLA 900
            MDYTPAPP QLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKE FKARS+PCI LA
Sbjct: 841  MDYTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELA 900

Query: 901  KLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTS 960
            KLFSIAVDFPKTGVPAIIP  L VKEFPDFMEKPD+PSYESKNVIGKLFRAVK IAP  S
Sbjct: 901  KLFSIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKGIAPNIS 960

Query: 961  HISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGN 1020
            +I  FTR+VA +CYDSDME EG+EDYV+DAIYHK  YDYKLGNLLDYYGIKSE+EI SGN
Sbjct: 961  YIRSFTRDVAMRCYDSDMETEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGN 1020

Query: 1021 IMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHV 1080
            IM MSKSFT++RDAEAINLA RSLRKEARTWFN +ESGPD    SG DDLFAKASAWYHV
Sbjct: 1021 IMRMSKSFTRRRDAEAINLAARSLRKEARTWFNTKESGPD----SGSDDLFAKASAWYHV 1080

Query: 1081 TYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNL 1140
            TYH SYWGSYN+ M RDHYLSFPWCVY KLMQ+KENN+RR+++ASRLA LD RF   LNL
Sbjct: 1081 TYHHSYWGSYNDGMKRDHYLSFPWCVYHKLMQVKENNLRRREKASRLATLD-RFSRVLNL 1128

[Close]
BLAST of Moc09g31840 vs. ExPASy TrEMBL
Match: A0A6J1FSA2 (RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447985 PE=3 SV=1)

HSP 1 Score: 1908.3 bits (4942), Expect = 0.0e+00
Identity = 938/1140 (82.28%), Postives = 1028/1140 (90.18%), Query Frame = 0 

Query: 1    MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE 60
            MGKTVHISGFP+  TAD+V+S+LE RTG+GTVYA+K+R PK+GGSR+YA VQF G+ +AE
Sbjct: 15   MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFIGAAQAE 74

Query: 61   LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW 120
            LIISLAN   QRLWYG+SYLKAR ADVDI+PKPRTY+HTLEDLTLCFGCQVSSEKF VLW
Sbjct: 75   LIISLAN---QRLWYGSSYLKARAADVDIVPKPRTYVHTLEDLTLCFGCQVSSEKFHVLW 134

Query: 121  EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP 180
            EG   LVTFG  MRKMNF L HNFVEYRF+LSYENIW+I+LH  +HQSMK L+IQLYGAP
Sbjct: 135  EGDVELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAP 194

Query: 181  WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLKLHNCREL 240
             IYKKV  SSG  Q+FDDPL N+FKEVPDDQWVR+ DFTPS+ +GQSSSLCLKL N R+L
Sbjct: 195  RIYKKVAPSSG--QIFDDPLFNFFKEVPDDQWVRTADFTPSNSVGQSSSLCLKLPNGRQL 254

Query: 241  PNFGQNFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGC 300
            PNF ++FAYY+E EDEF+LVDGGN FSCS DLVP+VDSRP++ LPY+IIFK+N LVQ+GC
Sbjct: 255  PNFRRHFAYYEEFEDEFKLVDGGNSFSCSDDLVPVVDSRPNVLLPYEIIFKVNVLVQNGC 314

Query: 301  ISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSP 360
            I+GP+LDT FY LVDP RI++E+VE+AL++LFHLKEC Y+P S+LTEQYKKY + P NSP
Sbjct: 315  IAGPSLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSP 374

Query: 361  AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRS 420
            AI+LD GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRD+DNFLRVSFVDEEWDKMRS
Sbjct: 375  AIALDDGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRS 434

Query: 421  IDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPG 480
             DLLPR +S+I++ KT+IY+RILSVLKNGI IG K FKFLAFSSSQLR+NSLWMFA+RPG
Sbjct: 435  TDLLPRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPG 494

Query: 481  LDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 540
            LDA  IR WMGDFR IKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV
Sbjct: 495  LDAAVIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 554

Query: 541  FSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKF 600
            FSDGIGKISSDFAK+V++KC L AFTPSAFQIRYGGYKGVVAVDP SS KLSLRKSMCKF
Sbjct: 555  FSDGIGKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKF 614

Query: 601  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ 660
            ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGV+DEVFEKKQ EA+EQLDAILTDPLKAQ
Sbjct: 615  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQ 674

Query: 661  EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM 720
            EALELM+PGENTN+LKEMLKCGYKP+VEPYLSMMLQ FR SKLL+LRTKSR+FIPNGRAM
Sbjct: 675  EALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAM 734

Query: 721  MGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPG 780
            MGCLDETG+LEYGQVFVQ+S  +   +S  TSAF++S SE  + I GNV VAKNPCLHPG
Sbjct: 735  MGCLDETGTLEYGQVFVQISSVRHRHIS-DTSAFDMSGSEDHLVIVGNVTVAKNPCLHPG 794

Query: 781  DVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 840
            DVRVL AVNVP LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP
Sbjct: 795  DVRVLNAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 854

Query: 841  MDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLA 900
            MDYTPAPP QLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKE FKARS+PCI LA
Sbjct: 855  MDYTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELA 914

Query: 901  KLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTS 960
            KLFSIAVDFPKTGVPAIIP  L VKEFPDFMEKPD+PSYESKNVIGKLFRAVK IAP  S
Sbjct: 915  KLFSIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKGIAPNIS 974

Query: 961  HISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGN 1020
            +I  FTR+VA +CYDSDME EG+EDYV+DAIYHK  YDYKLGNLLDYYGIKSE+EI SGN
Sbjct: 975  YIRSFTRDVAMRCYDSDMETEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGN 1034

Query: 1021 IMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHV 1080
            IM MSKSFT++RDAEAINLA RSLRKEARTWFN +ESGPD    SG DDLFAKASAWYHV
Sbjct: 1035 IMRMSKSFTRRRDAEAINLAARSLRKEARTWFNTKESGPD----SGSDDLFAKASAWYHV 1094

Query: 1081 TYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNL 1140
            TYH SYWGSYN+ M RDHYLSFPWCVY KLMQ+KENN+RR+++ASRLA LD RF   LNL
Sbjct: 1095 TYHHSYWGSYNDGMKRDHYLSFPWCVYHKLMQVKENNLRRREKASRLATLD-RFSRVLNL 1142

[Close]
BLAST of Moc09g31840 vs. ExPASy TrEMBL
Match: A0A6J1K2P9 (RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111490498 PE=3 SV=1)

HSP 1 Score: 1897.5 bits (4914), Expect = 0.0e+00
Identity = 937/1140 (82.19%), Postives = 1026/1140 (90.00%), Query Frame = 0 

Query: 1    MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE 60
            MGKTVHISGFP+  TAD+V+S+LE RTG+GTVYA+K+R PK+GGSR+YA VQFTG+ +AE
Sbjct: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFTGAAQAE 60

Query: 61   LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW 120
            LIISLAN   QRLWYG+SYLKAR ADVDI+PKPRTY+HTLE+LTLCFGCQVSSEKF VLW
Sbjct: 61   LIISLAN---QRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLW 120

Query: 121  EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP 180
            EG   LVTFG  MRKMNF L HNFVEYRF+LSYENIW+I+LH  +HQSMK L+IQLYGAP
Sbjct: 121  EGDVELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAP 180

Query: 181  WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLKLHNCREL 240
             IYKKV  SSG  Q+FDDPL N+FKEVPDDQ VR+ DFTPS  IGQSSSLCLKL N R+L
Sbjct: 181  RIYKKVAPSSG--QIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQL 240

Query: 241  PNFGQNFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSRPDIFLPYKIIFKINALVQHGC 300
            PNF ++FAYY+E EDEF+LVDGGNGFSCS DLVP+VDS P++ LPY+IIFK+N LVQ+GC
Sbjct: 241  PNFRRHFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGC 300

Query: 301  ISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSP 360
            I GP+LDT FY LVDP RI++E+VE+AL++LFHLKEC Y+P S+LTEQYKKY + P NSP
Sbjct: 301  IPGPSLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSP 360

Query: 361  AISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRS 420
            AI+LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRD+DNFLRVSFVDEEWDKMRS
Sbjct: 361  AIALDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRS 420

Query: 421  IDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPG 480
             DLLPR +S+I++ KT+IY+RILSVLKNGI IG K FKFLAFSSSQLR+NSLWMFA+RPG
Sbjct: 421  TDLLPRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPG 480

Query: 481  LDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 540
            LDA  IR WMGDF+ IKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV
Sbjct: 481  LDAAVIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYV 540

Query: 541  FSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSMCKF 600
            FSDGIGKISSDFAK+V++KC L AFTPSAFQIRYGGYKGVVAVDP SS KLSLRKSMCKF
Sbjct: 541  FSDGIGKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKF 600

Query: 601  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ 660
            ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGV+DEVFEKKQ EA+EQLDAILTDPLKAQ
Sbjct: 601  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQ 660

Query: 661  EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM 720
            EALELM+PGENTN+LKEMLKCGYKP+VEPYLSMMLQ FR SKLL+LRTKSR+FIPNGRAM
Sbjct: 661  EALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAM 720

Query: 721  MGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPG 780
            MGCLDETG+LEYGQVFVQ+S A+   +S  TSAF++S SE  + I GNV VAKNPCLHPG
Sbjct: 721  MGCLDETGTLEYGQVFVQISNARHRHIS-DTSAFDMSGSEDHLVIVGNVTVAKNPCLHPG 780

Query: 781  DVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 840
            DVRVL AVNVP LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP
Sbjct: 781  DVRVLNAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPP 840

Query: 841  MDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCINLA 900
            MDYTPAPP QLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKE FKARS+PCI LA
Sbjct: 841  MDYTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELA 900

Query: 901  KLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTTS 960
            KLFSIAVDFPKTGVPAIIP  L VKEFPDFMEKPD+ SYESKNVIGKLFRAVK IAP  S
Sbjct: 901  KLFSIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNIS 960

Query: 961  HISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEILSGN 1020
            +I  FTR+VA +CYDSDME EG+EDYV+DAIYHK  YDYKLGNLLDYYGIKSE+EI SGN
Sbjct: 961  YIRSFTRDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGN 1020

Query: 1021 IMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAWYHV 1080
            IM MSKSFT++RDAEAINLA RSLRKEARTWFN +ESG D    SG DDLFAKASAWYHV
Sbjct: 1021 IMRMSKSFTRRRDAEAINLAARSLRKEARTWFNTKESGLD----SGSDDLFAKASAWYHV 1080

Query: 1081 TYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFRNALNL 1140
            TYH SYWGSYN+ M RDHYLSFPWCVY KLMQ+KENN+R+++RASRLA LD RF   LNL
Sbjct: 1081 TYHHSYWGSYNDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLD-RFSRVLNL 1128

[Close]
BLAST of Moc09g31840 vs. TAIR 10
Match: AT1G14790.1 (RNA-dependent RNA polymerase 1 )

HSP 1 Score: 1422.1 bits (3680), Expect = 0.0e+00
Identity = 712/1138 (62.57%), Postives = 871/1138 (76.54%), Query Frame = 0 

Query: 1    MGKTVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGSRLYAFVQFTGSREAE 60
            MGKT+ + GFP GV+A+ V+ +LE  TG GTVYA+K+R+PKKGG R+YA VQFT  R   
Sbjct: 1    MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTR 60

Query: 61   LIISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEKFCVLW 120
            LII+ A    +RL+YG SYLKA E + DI+PKPR  +HT+  L + FGCQVS++KF  LW
Sbjct: 61   LIITAA---AERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLW 120

Query: 121  EGRDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAP 180
              +DV V+FG GMRK++F  S    +YR ELSYENIW+I+LH  + +S K+LVIQ+ GAP
Sbjct: 121  SAQDVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAP 180

Query: 181  WIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLKLHNCREL 240
             I++K +       +F   +++++ +  D+QW+R+TDFT SSCIGQS++ CL+L     +
Sbjct: 181  KIFEKEDQP--INLLFG--IMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNV 240

Query: 241  PNFGQNFAYYKETEDEFRLVDGGNGFSCSAD-LVPMVDSRPDIFLPYKIIFKINALVQHG 300
            P+F +NFA Y E      L++ G+ +S +A+ LVP+VD  P   LP++I+FK+N LVQ+ 
Sbjct: 241  PDFRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNA 300

Query: 301  CISGPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRP--P 360
            C+SGPALD  FY L++ ++     ++H L++LFHL EC Y+P  WL ++YKK++ +   P
Sbjct: 301  CLSGPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLP 360

Query: 361  NSPAISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDK 420
             SP ISLD GLVY+ RVQ+TP +VYF GPEVNVSNRVLRH+S+ I+NFLRVSFVDE+ +K
Sbjct: 361  LSPTISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEK 420

Query: 421  MRSIDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFAT 480
            +RS+DL PR+S+    R+T++Y RI SVL++GIVIG K F+FLAFSSSQLR+NS WMFA 
Sbjct: 421  VRSMDLSPRSST---QRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAP 480

Query: 481  RPGLDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEV 540
               + A  IRAWMGDF  I+N AKYAARLGQSF SS ETL+V   E E+IPD+E+     
Sbjct: 481  IDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGT 540

Query: 541  KYVFSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDPYSSKKLSLRKSM 600
            +YVFSDGIGKIS++FA+KV+ KCGL  F+PSAFQIRYGGYKGVVAVDP SSKKLSLRKSM
Sbjct: 541  RYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSM 600

Query: 601  CKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPL 660
             KFES+NTKLDVL +SKYQPC++NRQLITLLSTLGV D VFEKKQRE V++LDAILT PL
Sbjct: 601  SKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPL 660

Query: 661  KAQEALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNG 720
            +A EAL LMAPGENTN+LK ++ CGYKP+ EP+LSMMLQ FRASKLL+LRTK+R+FI  G
Sbjct: 661  EAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGG 720

Query: 721  RAMMGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCL 780
            R+MMGCLDET +LEYGQV VQ S   +                +R  I G VVVAKNPCL
Sbjct: 721  RSMMGCLDETRTLEYGQVVVQYSDPMR--------------PGRRFIITGPVVVAKNPCL 780

Query: 781  HPGDVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQ 840
            HPGDVRVL+AVNVP L HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD EL+PPR 
Sbjct: 781  HPGDVRVLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRT 840

Query: 841  IPPMDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCI 900
              PMDYTP P   LD DVTIE+V+EYF NY+VNDSLGIIANAHTAFADKE  KA S PCI
Sbjct: 841  SEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCI 900

Query: 901  NLAKLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAP 960
             LAK FS AVDFPKTGV A+IP  LYVKE+PDFMEKPDKP+YESKNVIGKLFR VK+ AP
Sbjct: 901  ELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAP 960

Query: 961  TTSHISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEIL 1020
                I  FT +VA + YD DME++G+E+YVD+A Y K NYD+KLGNL+DYYGIK+EAEIL
Sbjct: 961  PLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEIL 1020

Query: 1021 SGNIMTMSKSFTKKRDAEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLFAKASAW 1080
            SG IM MSKSFTK+RDAE+I  A+R+LRKE  + FN  E   +           AKASAW
Sbjct: 1021 SGGIMRMSKSFTKRRDAESIGRAVRALRKETLSLFNASEEEENES---------AKASAW 1080

Query: 1081 YHVTYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKENNVRRKQRASRLAALDSRFR 1136
            YHVTYH SYWG YNE +NRDH+LSF WCVYDKL++IK+ N+ R+QR   L  LD   R
Sbjct: 1081 YHVTYHSSYWGLYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRRQRQETLERLDHVLR 1105

[Close]
BLAST of Moc09g31840 vs. TAIR 10
Match: AT4G11130.1 (RNA-dependent RNA polymerase 2 )

HSP 1 Score: 764.2 bits (1972), Expect = 1.5e-220
Identity = 464/1156 (40.14%), Postives = 675/1156 (58.39%), Query Frame = 0 

Query: 4    TVHISGFPAGVTADAVRSYLEGRTGVGTVYALKIREPKKGGS-RLYAFVQFTGSREAELI 63
            TV IS  P  + AD +  +LE   G  TV+AL+I   +     R +A VQFT        
Sbjct: 11   TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKSRA 70

Query: 64   ISLANQRIQRLWYGTSYLKAREADVDIIPKPRTYMHTLEDLTLCFGCQVSSEK-FCVL-- 123
              L++Q   +L + T  L+  EA  DIIP+P      L+D+ L  G   S EK FC L  
Sbjct: 71   QLLSSQ--SKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEK 130

Query: 124  WEG-RDVLVTFGFGMRKMNFRLSHNFVEYRFELSYENIWRIE-----LHHSRHQSMKYLV 183
            W+G R  ++T     R++ F +  +   Y+ E+ +E+I  IE     ++    +   +L+
Sbjct: 131  WDGVRCWILT---EKRRVEFWVWESGDCYKIEVRFEDI--IETLSCCVNGDASEIDAFLL 190

Query: 184  IQLYGAPWIYKKVESSSGSRQVFDDPLLNYFKEVPDDQWVRSTDFTPSSCIGQSSSLCLK 243
               YG P ++K+V     ++  F      + KE  D  W+R+TDF+ S  IG S+  CL+
Sbjct: 191  KLKYG-PKVFKRVTVHIATK--FKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLE 250

Query: 244  LHNCRELPNFGQNFAYYKETEDEFRLVDGGNGFSCSADLVPMVDSR-PDIFLPYKIIFKI 303
            +HN   + +      YY+E       VD G  F+ +A +VP++++    +  PY+I+F++
Sbjct: 251  VHNGSTMLDIFSGLPYYREDTLSLTYVD-GKTFASAAQIVPLLNAAILGLEFPYEILFQL 310

Query: 304  NALVQHGCIS-GPALDTSFYHLVDPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKK 363
            NALV    IS   A D     ++  R + +E     L +L       Y P  ++  Q + 
Sbjct: 311  NALVHAQKISLFAASDMELIKIL--RGMSLETALVILKKLHQQSSICYDPVFFVKTQMQS 370

Query: 364  YLRRPPNSPAIS----LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLR 423
             +++  +SPA +     +  ++  +R  +TP K+Y  GPE+  +N V+++F+  + +F+R
Sbjct: 371  VVKKMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMR 430

Query: 424  VSFVDEEWDKM--RSIDLLPRTSSTIKDRKTEIYKRILSVLKNGIVIGGKMFKFLAFSSS 483
            V+FV+E+W K+   ++ +  +    +K  +T IY R+LS+L  GI +G K F+FLAFS+S
Sbjct: 431  VTFVEEDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSAS 490

Query: 484  QLRDNSLWMFATRPGLDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHERE 543
            QLR NS+WMFA+   + AEDIR WMG FR+I++ +K AAR+GQ F +S +TL V   + E
Sbjct: 491  QLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVE 550

Query: 544  IIPDIEVQHGEVKYVFSDGIGKISSDFAKKVSAKCGLKAFTPSAFQIRYGGYKGVVAVDP 603
             IPDIEV      Y FSDGIGKIS  FAK+V+ KCGL +  PSAFQIRYGGYKGV+AVD 
Sbjct: 551  QIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGVIAVDR 610

Query: 604  YSSKKLSLRKSMCKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREA 663
             S +KLSLR SM KF+S+N  L+V  +++  PCFLNR++I LLSTLG+ D +FE  Q   
Sbjct: 611  SSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVH 670

Query: 664  VEQLDAILTDPLKAQEALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLD 723
            +  L  +L D   A   L+ ++   + N+L +ML  GY P+ EPYLSMML+    S+L +
Sbjct: 671  LSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSE 730

Query: 724  LRTKSRMFIPNGRAMMGCLDETGSLEYGQVFVQVSGAKQSILSVTTSAFNISSSEQRVAI 783
            L+++ R+ +P GR ++GC+DE G LEYGQV+V+V+  K  + S   S F     E  V I
Sbjct: 731  LKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVI 790

Query: 784  EGNVVVAKNPCLHPGDVRVLKAVNVPRLYH--MVDCVVFPQKGSRPHPNECSGSDLDGDI 843
             G VVV KNPCLHPGD+RVL A+          +DC++FPQKG RPHPNECSG DLDGD 
Sbjct: 791  -GKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQ 850

Query: 844  YFVCWDTELIPPRQIPPMDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAF 903
            +FV WD ++IP    PPMDY  + P  +D DVT+E++ ++FV+YM++D+LG+I+ AH   
Sbjct: 851  FFVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVH 910

Query: 904  ADKELFKARSSPCINLAKLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKN 963
            AD++  KARS  C+ LA L S AVDF KTG PA +P  L  +EFPDF+E+ +KP+Y S++
Sbjct: 911  ADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISES 970

Query: 964  VIGKLFRAVKDIAPTTSHISLFTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGN 1023
            V GKL+RAVK         +     VA   YD  +E  G+E +++ A  H++ Y  KL +
Sbjct: 971  VFGKLYRAVKSSLAQRKPEAESEDTVA---YDVTLEEAGFESFIETAKAHRDMYGEKLTS 1030

Query: 1024 LLDYYGIKSEAEILSGNIMTMSKSFTKKRD-------AEAINLAIRSLRKEARTWFNERE 1083
            L+ YYG  +E EIL+G + T  K     RD        + I L+++ L KEA  WF   +
Sbjct: 1031 LMIYYGAANEEEILTGILKT--KEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWF--EK 1090

Query: 1084 SGPDSDSVSGLDDLFAKASAWYHVTYHPSYWGSYNEDMNRDHYLSFPWCVYDKLMQIKEN 1133
            S  D      L      ASAWY+VTY+P      N    +  +LSFPW V D L+ IK  
Sbjct: 1091 SCEDEQQKKKL------ASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIKAE 1132

[Close]
BLAST of Moc09g31840 vs. TAIR 10
Match: AT3G49500.1 (RNA-dependent RNA polymerase 6 )

HSP 1 Score: 599.0 bits (1543), Expect = 8.1e-171
Identity = 427/1188 (35.94%), Postives = 610/1188 (51.35%), Query Frame = 0 

Query: 5    VHISGFPAGVTADAVRSYLEGRTGVGTVYALK----------------------IREPKK 64
            V I GF    TA  +  YLE   G+     LK                      I E KK
Sbjct: 15   VSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTSWTPPGSYPNFEIADTSNIPSIDEYKK 74

Query: 65   GGSRLYAFVQFTGSREAELIISLANQRIQRLWYGTSYLKAREADVDIIPK---------P 124
                 +AFV F     A   +  A Q           L  +   V + PK          
Sbjct: 75   --VEPHAFVHFAVFESAGRAMDAAGQ-------CNLILDGQPLKVSLGPKNPYSLNQRRR 134

Query: 125  RTYMHTLEDLTLCFGCQVSSEKFCVLW--EGRDVLVTFGFGMRKMNFRLSHNF------- 184
             T  + L  +TL  G  VS + F V W  EG D LV       K  FR S  F       
Sbjct: 135  TTVPYKLAGITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVM 194

Query: 185  -----VEYRFELSYENIWRIELHHSRHQSMKYLVIQLYGAPWIYKKVESSSGSRQVFDDP 244
                  +Y+ EL   +I  +  + + H  +  L++QL  +P ++ +         V  D 
Sbjct: 195  HAVINCDYKLELLVRDIQTVRQYKTLHGFV--LILQLASSPRVWYRTADDDIYDTVPGDL 254

Query: 245  LLNYFKEVPDDQWVRSTDFTPSSCIGQSSS--LCLKLHNCRELPNFGQNFAYYKETEDEF 304
            L +      DD W+R+TDFT    IG+  S  + +      +L      F   +  E+  
Sbjct: 255  LDD------DDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERV 314

Query: 305  RLVDGGNGFSCSADLVPMVDSRPDIF----LPYKIIFKINALVQHGCISGPALDTSFYHL 364
            R         C  +  P+ D    I     + ++I+F +N+++  G  +   L   F+ L
Sbjct: 315  RWPPRIRNEPCFGE--PVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDL 374

Query: 365  V--DPRRIKIEFVEHALDRLFHLKECEYKPYSWLTEQYKKYLRRPPNSPAISLDAGLVYV 424
            +   P+ + I  ++H    L   K   +  Y  L    +   + P    +      +  +
Sbjct: 375  LRNQPKDVNIASLKH----LCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEI 434

Query: 425  RRVQITPCKVYFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRSIDLLPRTSSTI 484
            RR+ ITP + Y   PEV +SNRVLR +    + FLRV+F+DE    + S  L    +  +
Sbjct: 435  RRLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIV 494

Query: 485  KD-------RKTEIYKRILSVLKNGIVIGGKMFKFLAFSSSQLRDNSLWMFATRPGLDAE 544
            KD       +KT ++KR+ S+L +G  + G+ + FLAFS++QLRD S W FA        
Sbjct: 495  KDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVS 554

Query: 545  DIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREI-IPDIEVQHGEVKYVFSD 604
            DI+ WMG F+  KN AK AAR+G  F S+  T+ V  HE +  +PDIE ++G   YVFSD
Sbjct: 555  DIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIE-RNG---YVFSD 614

Query: 605  GIGKISSDFAKKVSAKCGLKA-FTPSAFQIRYGGYKGVVAVDPYSSK--KLSLRKSMCKF 664
            GIG I+ D A +V  K  L   ++P A+QIRY G+KGVVA  P  S   +L+LR SM KF
Sbjct: 615  GIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKF 674

Query: 665  ESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQ 724
             S +T L++  ++++QP FLNRQ+ITLLS LGV DE+F   Q   + +L+ IL D   A 
Sbjct: 675  FSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAF 734

Query: 725  EALELMAPGENTNVLKEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAM 784
            E L      E  N    ML  G+KP  EP+L  ML + R ++L  LR KSR+F+ +GR +
Sbjct: 735  EVLTASC-AEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWL 794

Query: 785  MGCLDETGSLEYGQVFVQVSGAK-QSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHP 844
            MGCLDE G LE+GQ F+QVS    ++  S   S F  + ++  V ++G V +AKNPCLHP
Sbjct: 795  MGCLDEAGILEHGQCFIQVSKPSIENCFSKHGSRFKETKTDLEV-VKGYVAIAKNPCLHP 854

Query: 845  GDVRVLKAVNVPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPP--RQ 904
            GDVR+L+AV+VP+L+HM DC++FPQKG RPH NE SGSDLDGD+YFV WD +LIPP  + 
Sbjct: 855  GDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKS 914

Query: 905  IPPMDYTPAPPTQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCI 964
             P M Y  A    L R V  +D+ ++F   + N+ LG I NAH   AD+  + A    C+
Sbjct: 915  YPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECL 974

Query: 965  NLAKLFSIAVDFPKTGVPAIIPPELYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAP 1024
             LA+L + AVDFPKTG    +P  L  K +PDFM K D  +Y+S  ++G+L+R VK++  
Sbjct: 975  LLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYD 1034

Query: 1025 TTSHISL-FTREVARQCYDSDMEIEGYEDYVDDAIYHKNNYDYKLGNLLDYYGIKSEAEI 1084
              +  S   + + +   YD+ +EI G+ED + +A  HK  YD +L  LL  Y ++ E EI
Sbjct: 1035 EDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEI 1094

Query: 1085 LSGNIMTMSKSFTKKRD--AEAINLAIRSLRKEARTWFNERESGPDSDSVSGLDDLF--- 1115
            ++G+I +M K  +KK+    E +  +  SL+KE R  F   E+ PD +++S  +      
Sbjct: 1095 VTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVF--EETIPDHENLSEEEKNILYE 1154

[Close]
BLAST of Moc09g31840 vs. TAIR 10
Match: AT2G19910.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 117.9 bits (294), Expect = 5.5e-26
Identity = 122/474 (25.74%), Postives = 195/474 (41.14%), Query Frame = 0 

Query: 540 VFSDGIGKISSDFAK---------------KVSAK---------CGLKAFTPSAFQIRYG 599
           + SDG G IS D A+                + +K         CG +      F+I Y 
Sbjct: 401 IHSDGTGYISEDLARMCPVNIFKGKSMRSNNIQSKNLNFEGQGPCGQEPPLLIQFRIFYN 460

Query: 600 GY--KGVVAVD-PYSSKKLSLRKSMCKFESDNTKLDVLGYSKYQ---------PCFLNRQ 659
           GY  KG    +     + + +R SM K   D T  ++  ++  +            L+R 
Sbjct: 461 GYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTTSNPPRKARLSRN 520

Query: 660 LITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQEALELMAPGENTNVLKEMLKCGY 719
           L+ LLS  GV ++ F    R  +E+   I      A +A       + T    +M+  G 
Sbjct: 521 LVALLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYGDDQYT---ADMILVGI 580

Query: 720 KPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAMMGCLDETGSLEYGQVFVQVSGAK 779
            P  EPYL   L     ++   L+   R  I     +MG +D TG L+  ++ V +   +
Sbjct: 581 -PLDEPYLKDRLSYLLKTERNALKA-GRFPIDESYYIMGTVDPTGELKENEICVILHSGQ 640

Query: 780 QSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPGDVRVLKAVNVPRLYHMVD----C 839
                                I G+V+V +NP LH GD+ VLKA  V  L   V      
Sbjct: 641 ---------------------ISGDVLVYRNPGLHFGDIHVLKATYVKALEDYVGNAKFA 700

Query: 840 VVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIP---------PRQIPPMDYTPAPPTQ 899
           V FPQKG R   +E +G D DGD+YF+  + +L+              P   Y    P++
Sbjct: 701 VFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVSSSKPSKIYCGRKPSE 760

Query: 900 LDRDVTIEDVQEYFV--NYMVNDSLGIIANAHTAFAD----------KELFKARSSPCIN 953
           L  +   E++ + F+   +   D +G+ A+      D          KE ++ R    + 
Sbjct: 761 LSEEELEEELFKMFLKARFCKRDVIGMAADCWLGIMDPFLTLGDESAKEKYE-RKKNILK 820

[Close]
BLAST of Moc09g31840 vs. TAIR 10
Match: AT2G19920.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 108.2 bits (269), Expect = 4.4e-23
Identity = 165/661 (24.96%), Postives = 266/661 (40.24%), Query Frame = 0 

Query: 382 YFCGPEVNVSNRVLRHFSRDIDNFLRVSFVDEEWDKMRSIDLLPRTSSTIKDRKTEIYKR 441
           Y C    + S R+  +F  +    L     D+    +R  D LP+  ST  D     YK 
Sbjct: 216 YQCHVAPDGSYRLKGYFLENTGTHLHKVLGDDNVLTVR-FDQLPK-ESTYCDNPYSKYKE 275

Query: 442 ILSVLKNGIVIGGKMFKFLAF------------SSSQLRDNSLWMFATR----------P 501
           I    KNGI++G + ++F  F            S+ Q++   +   +T            
Sbjct: 276 I---AKNGIMVGLRRYQFFVFKDGGKAEKKKRNSTKQVKCYFIRTGSTASSDMENPYILS 335

Query: 502 GLDAEDIRAWMGDFRQIKNPAKYAARLGQSFGSSTETLSVARHEREIIP----------- 561
           G+   + R        + +PA Y AR      S T+ L V   E  ++            
Sbjct: 336 GMSIHEARMHFMHVHTLPSPANYMARFSLIL-SKTKKLEVDMTEITVMQIDDIHCHDQSN 395

Query: 562 -DIEVQHGEVKYVFSDGIGKISSDFAKKVSAKCGLKAF-----------------TPSAF 621
            D+  ++G+ + + SDG G IS D A+     C L  F                  P   
Sbjct: 396 NDVLDKNGKPR-IHSDGTGYISEDLAR----MCPLNIFKGKSMRSNNIQGTCVQEPPLLI 455

Query: 622 QIRY----GGYKGV-----------VAVDPYSSKKLSLRKSMCKFESDNTKLDVLGYSKY 681
           QIR        KG+           V V P S  K+   K++  F + N+   V   +  
Sbjct: 456 QIRMFNDGSAVKGIFLLNKNLPPQTVQVRP-SMIKVYKDKNLSNFSTFNSLEVVTTSNPP 515

Query: 682 QPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLKAQEALELMAPGENTNVL 741
           +   L++ L+ LLS  GV ++ F       +E+   I      A +A       ++ N L
Sbjct: 516 KRAKLSKNLVALLSYGGVPNDFFLDILLNTLEKKKTIFFKVRAAGKAALHYGNMDDKNAL 575

Query: 742 KEMLKCGYKPNVEPYLSMMLQAFRASKLLDLRTKSRMFIPNGRAMMGCLDETGSLEYGQV 801
            +M+  G  P  EPYL   L      +  DL+   ++ I     +MG +D TG L+    
Sbjct: 576 -QMIMAGI-PLDEPYLKHYLSKLLKLEKDDLKA-GKLPIDESYYLMGTVDPTGELKED-- 635

Query: 802 FVQVSGAKQSILSVTTSAFNISSSEQRVAIEGNVVVAKNPCLHPGDVRVLKAVNVPRLYH 861
             +VSG  +S                      +V+V +NP LH GD+ +LKA  V  L  
Sbjct: 636 --EVSGLAKS---------------------QDVLVYRNPGLHFGDIHILKATYVKSLEQ 695

Query: 862 MVD----CVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELI-------PPRQIPPMD-- 921
            V      V FPQKG R   +E +G D DGD+YF+  + +L+       P     P    
Sbjct: 696 YVGNSKYGVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHYKPSEPWVSSSPRSKI 755

Query: 922 YTPAPPTQLDRDVTIEDVQEYFV--NYMVNDSLGIIANAHTAFADK------ELFKARSS 953
           YT   P++L  +   E++ + F+   +  +  +G  A++  A  D+      E  K ++ 
Sbjct: 756 YTGRQPSELSPEQLEEELFKIFLKTGFSPSSVIGQAADSWLAIMDRFLTLGDENVKEKAE 815

The following BLAST results are available for this feature:
BLAST of Moc09g31840 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022146805.10.0e+00100.00probable RNA-dependent RNA polymerase 1 isoform X1 [Momordica charantia][more]
XP_022146806.10.0e+0097.11probable RNA-dependent RNA polymerase 1 isoform X2 [Momordica charantia][more]
XP_038891504.10.0e+0082.56RNA-dependent RNA polymerase 1 isoform X1 [Benincasa hispida] >XP_038891505.1 RN... [more]
XP_022943173.10.0e+0082.28RNA-dependent RNA polymerase 1-like isoform X2 [Cucurbita moschata] >XP_02294317... [more]
XP_022943172.10.0e+0082.28RNA-dependent RNA polymerase 1-like isoform X1 [Cucurbita moschata][more]
BLAST of Moc09g31840 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LQV20.0e+0062.57RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1[more]
Q0DXS31.7e-28566.67Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947... [more]
O825042.1e-21940.14RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1[more]
Q7XM311.5e-20637.36Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947... [more]
Q9SG021.1e-16935.94RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1[more]
BLAST of Moc09g31840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CYE00.0e+00100.00RNA-dependent RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111015923 PE=3... [more]
A0A6J1D0H10.0e+0097.11RNA-dependent RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111015923 PE=3... [more]
A0A6J1FXH50.0e+0082.28RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447985 PE=3 ... [more]
A0A6J1FSA20.0e+0082.28RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447985 PE=3 ... [more]
A0A6J1K2P90.0e+0082.19RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111490498 PE=3 SV... [more]
BLAST of Moc09g31840 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G14790.10.0e+0062.57RNA-dependent RNA polymerase 1 [more]
AT4G11130.11.5e-22040.14RNA-dependent RNA polymerase 2 [more]
AT3G49500.18.1e-17135.94RNA-dependent RNA polymerase 6 [more]
AT2G19910.15.5e-2625.74RNA-dependent RNA polymerase family protein [more]
AT2G19920.14.4e-2324.96RNA-dependent RNA polymerase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..88
e-value: 2.1E-5
score: 26.5
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePFAMPF05183RdRPcoord: 376..952
e-value: 3.4E-188
score: 626.9
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePANTHERPTHR23079RNA-DEPENDENT RNA POLYMERASEcoord: 2..1138
NoneNo IPR availablePANTHERPTHR23079:SF44RNA-DEPENDENT RNA POLYMERASEcoord: 2..1138
NoneNo IPR availableCDDcd00590RRM_SFcoord: 5..69
e-value: 6.34739E-7
score: 46.1441
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 3..92
score: 10.138468
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 2..69

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g31840.1Moc09g31840.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0001172 transcription, RNA-templated
molecular_function GO:0003723 RNA binding
molecular_function GO:0003968 RNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0003676 nucleic acid binding