Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGACAGCTTGCTAATCAGATGAAGTCGAGATCACAAGGCTCATTTTCAGGACATACTGAAGTTCCAAAAGGAGAAGGAAAAGAGCAATGCAAGGCGGTGACTTTGAGAAGTAGACTAGTGCACAAAGGACCCAAGATGCCGAAATTGATGCATAGAAACCCTCCACATCAATCCAGATTGCCCCAAGTGAATAAGAGAAAGAAGAAACCACCTCAGGTGGTGGCGCCTCTCCTCAGGTAAGTTCGTCTTTTACCCTGATTCCTTCCTTTCCACAAAGAGCCAAGAAAAACCAAGAATCTCATTTTAGAAAGTTCTTAGACATCCTTAAGCAGTTACACATAAATATTCTTTTAGTAGATGCTTTAGAGAAAATGTCAAATTACACTAAGTTTCTAAAGGATATTGTATCTAGGAAGAAGAAGATAAGAGAACATCAGATGGTAGTTATGACCAAGTGTAGTAGGAAGGTCGTGGGTAACCCTTTGCACATTAAATGTAAATATCCTGACAGTTTCATCATTCCTTGTTCAATTGGAGGAAAGAACTTAAGTAAAGCTCTATGCGACTTAAGTCCTAGCATTAACCTGATGCACTTGTCTGTTTTCAAAGAATTGAGTATAAGAAAAGCTAGACCAACAACAGTTATTCTCCAATTAGCAGAAAGATCCATTAAGAAGCCTAAGGGAAAAAAAAAAGAAGATGTTCTAGTTCAGGTAGATAAATTTAATCTTCCTTGCAGACTTCATCATCTTAGATTGTGAGGCTGACTTGGACATACCTATCATTTTAAGGAGACCTTTCTTAGCTACTGGAGACACTATGTTTAATGTTCAGAAAGGAGAAATAACAATGAAGGTTAACAATGATGAAGTTAAATTCAACGTTTTGGATGCAATGAAGCTTCTAGGAGATTTAGAAGAATTTTCAGTCATCAATGCTTCTAACTATGCTTCATTTTGTGAGTTTTATGACCTATTAGTCGCAGGAATAGAAGAAGAGTTGGAGCCTATAGAAGTTGAATGCTGA
mRNA sequence
ATGGGACAGCTTGCTAATCAGATGAAGTCGAGATCACAAGGCTCATTTTCAGGACATACTGAAGTTCCAAAAGGAGAAGGAAAAGAGCAATGCAAGGCGGTGACTTTGAGAAGTAGACTAGTGCACAAAGGACCCAAGATGCCGAAATTGATGCATAGAAACCCTCCACATCAATCCAGATTGCCCCAAGTGAATAAGAGAAAGAAGAAACCACCTCAGGTGGTGGCGCCTCTCCTCAGGAAGAAGAAGATAAGAGAACATCAGATGGTAGTTATGACCAAGTGTAGTAGGAAGGTCGTGGGTAACCCTTTGCACATTAAATGTAAATATCCTGACAGTTTCATCATTCCTTGTTCAATTGGAGGAAAGAACTTAAGTAAAGCTCTATGCGACTTAAGTCCTAGCATTAACCTGATGCACTTGTCTGTTTTCAAAGAATTGAGTATAAGAAAAGCTAGACCAACAACAGTTATTCTCCAATTAGCAGAAAGATCCATTAAGAAGCCTAAGGGAAAAAAAAAAGAAGATGTTCTAGTTCAGGTTAACAATGATGAAGTTAAATTCAACGTTTTGGATGCAATGAAGCTTCTAGGAGATTTAGAAGAATTTTCAGTCATCAATGCTTCTAACTATGCTTCATTTTGTGAGTTTTATGACCTATTAGTCGCAGGAATAGAAGAAGAGTTGGAGCCTATAGAAGTTGAATGCTGA
Coding sequence (CDS)
ATGGGACAGCTTGCTAATCAGATGAAGTCGAGATCACAAGGCTCATTTTCAGGACATACTGAAGTTCCAAAAGGAGAAGGAAAAGAGCAATGCAAGGCGGTGACTTTGAGAAGTAGACTAGTGCACAAAGGACCCAAGATGCCGAAATTGATGCATAGAAACCCTCCACATCAATCCAGATTGCCCCAAGTGAATAAGAGAAAGAAGAAACCACCTCAGGTGGTGGCGCCTCTCCTCAGGAAGAAGAAGATAAGAGAACATCAGATGGTAGTTATGACCAAGTGTAGTAGGAAGGTCGTGGGTAACCCTTTGCACATTAAATGTAAATATCCTGACAGTTTCATCATTCCTTGTTCAATTGGAGGAAAGAACTTAAGTAAAGCTCTATGCGACTTAAGTCCTAGCATTAACCTGATGCACTTGTCTGTTTTCAAAGAATTGAGTATAAGAAAAGCTAGACCAACAACAGTTATTCTCCAATTAGCAGAAAGATCCATTAAGAAGCCTAAGGGAAAAAAAAAAGAAGATGTTCTAGTTCAGGTTAACAATGATGAAGTTAAATTCAACGTTTTGGATGCAATGAAGCTTCTAGGAGATTTAGAAGAATTTTCAGTCATCAATGCTTCTAACTATGCTTCATTTTGTGAGTTTTATGACCTATTAGTCGCAGGAATAGAAGAAGAGTTGGAGCCTATAGAAGTTGAATGCTGA
Protein sequence
MGQLANQMKSRSQGSFSGHTEVPKGEGKEQCKAVTLRSRLVHKGPKMPKLMHRNPPHQSRLPQVNKRKKKPPQVVAPLLRKKKIREHQMVVMTKCSRKVVGNPLHIKCKYPDSFIIPCSIGGKNLSKALCDLSPSINLMHLSVFKELSIRKARPTTVILQLAERSIKKPKGKKKEDVLVQVNNDEVKFNVLDAMKLLGDLEEFSVINASNYASFCEFYDLLVAGIEEELEPIEVEC
Homology
BLAST of Moc09g18250 vs. NCBI nr
Match:
XP_022155996.1 (uncharacterized protein LOC111022971 [Momordica charantia])
HSP 1 Score: 197.6 bits (501), Expect = 1.2e-46
Identity = 134/314 (42.68%), Postives = 166/314 (52.87%), Query Frame = 0
Query: 1 MGQLANQMKSRSQGSFSGHTEVPKGEGKEQCKAVTLRSRLVHKGPKMPKLMHR------N 60
+GQL+N +K+R QGSF HTEVPK +GKEQCKAVTLRS L ++ PKMP + + N
Sbjct: 8 IGQLSNDLKARPQGSFPWHTEVPKRDGKEQCKAVTLRSGLSYERPKMPVEVEKPSTSIQN 67
Query: 61 PPHQSR---------------------------LPQVNKRKKKPPQ------------VV 120
P ++ PQ+ +K + Q +
Sbjct: 68 SPSEAEKEKTTSGEGEASGASSQENSSFLLIPPFPQILAKKNQETQFRKFLDILKQLHIN 127
Query: 121 APLL------------------RKKKIREHQMVVMTKCSRKVVGNPLHIKCKYPDSFIIP 180
PLL RKKK+ EH+MV MTKCS + VG+PL IKCK PDSF IP
Sbjct: 128 IPLLDALEQMPNYAKFLKDIVSRKKKLGEHEMVAMTKCSSEAVGSPLPIKCKDPDSFTIP 187
Query: 181 CSIGGKNLSKALCDLSPSINLMHLSVFKELSIRKARPTTVILQLAERSIKKPKGK----- 207
CSIGGKNL +ALCDL SINLM LSVFKEL I +ARPTTV LQLA+RSIKKP+GK
Sbjct: 188 CSIGGKNLGRALCDLGASINLMPLSVFKELGIGEARPTTVTLQLADRSIKKPEGKIKDKF 247
BLAST of Moc09g18250 vs. NCBI nr
Match:
XP_022147177.1 (uncharacterized protein LOC111016189 [Momordica charantia])
HSP 1 Score: 175.6 bits (444), Expect = 4.9e-40
Identity = 111/219 (50.68%), Postives = 133/219 (60.73%), Query Frame = 0
Query: 1 MGQLANQMKSRSQGSFSGHTEVPKGEGKEQCKAVTLRSRLVHKGPKMP------------ 60
+GQ AN +K+R QGSF HT+VPK +GKEQCKA+TLRS L ++ PKMP
Sbjct: 8 VGQHANDLKARPQGSFPRHTKVPKRDGKEQCKAITLRSGLSYEEPKMPVEVEKPSTSIQN 67
Query: 61 ----------------------------KLMHRNPPHQSRLPQVNKRKKKPPQVVAPLLR 120
K +H N P L Q++ K +V+
Sbjct: 68 ALSEVETEKTTSSKKNQETQFRKFLDILKQLHINIPLVDALEQMSNYAKFLKDIVS---I 127
Query: 121 KKKIREHQMVVMTKCSRKVVGNPLHIKCKYPDSFIIPCSIGGKNLSKALCDLSPSINLMH 180
KKK+ EH+MV MTKCS + VG+PL I+CK P SF IPC IGGKNL +ALCDL SINLM
Sbjct: 128 KKKLGEHEMVAMTKCSSEAVGSPLPIQCKDPGSFTIPCPIGGKNLGRALCDLGDSINLMP 187
BLAST of Moc09g18250 vs. NCBI nr
Match:
XP_022157836.1 (uncharacterized protein LOC111024449 [Momordica charantia])
HSP 1 Score: 162.2 bits (409), Expect = 5.6e-36
Identity = 110/290 (37.93%), Postives = 154/290 (53.10%), Query Frame = 0
Query: 1 MGQLANQMKSRSQGSFSGHTEVPKGEGKEQCKAVTLRSRLVHKGPKMPKLMHRNPPHQSR 60
MGQLA+++K+R +G+ TE PK EG+E CK +T RS L ++ PKMP+ P +
Sbjct: 295 MGQLASELKNRPRGTLPSATEEPKIEGREHCKTITTRSGLAYEEPKMPREGSSCPTKEK- 354
Query: 61 LPQVNKRKKKPPQVVAP---------LLRKKKIREHQMVVMTKCSRKVVGNPLHIKCKYP 120
+ +P ++ P + RKKK+ E++ V +T+CS V + + K K P
Sbjct: 355 --ETATEPDEPIEIEMPTYAKFLKDIITRKKKLGEYETVALTECSSNVFKSKMSPKLKDP 414
Query: 121 DSFIIPCSIGGKNLSKALCDLSPSINLMHLSVFKELSIRKARPTTVILQLAERSIKKPKG 180
SF IPCSIGGK++ +ALCDL SINLM LS+FK+L I KA PTTV LQLA+RSI KP+G
Sbjct: 415 GSFTIPCSIGGKDVGRALCDLRASINLMPLSIFKKLEIGKASPTTVTLQLADRSITKPEG 474
Query: 181 K----------------------------------------------KKEDVLVQVNNDE 236
K KK ++ + V++ +
Sbjct: 475 KIEDVLVKVDKFIFPADFIILNCEADKDVPIILGRPFLSTGETLIDVKKGELTMHVDDQK 534
BLAST of Moc09g18250 vs. NCBI nr
Match:
XP_022150857.1 (uncharacterized protein LOC111018901 [Momordica charantia])
HSP 1 Score: 147.9 bits (372), Expect = 1.1e-31
Identity = 90/194 (46.39%), Postives = 113/194 (58.25%), Query Frame = 0
Query: 80 RKKKIREHQMVVMTKCSRKVVGNPLHIKCKYPDSFIIPCSIGGKNLSKALCDLSPSINLM 139
R KK+ EH+ V +TKCS +GNPL +KCK P SF IPCSI GKNL +ALCDL SINLM
Sbjct: 14 RHKKLDEHETVALTKCSSDALGNPLPVKCKDPGSFTIPCSIVGKNLGRALCDLGASINLM 73
Query: 140 HLSVFKELSIRKARPTTVILQLAERSIKKPKGK--------------------------- 199
LSVFKEL+IR+ARP TV LQLA RSIKKP+GK
Sbjct: 74 TLSVFKELNIREARPITVTLQLANRSIKKPEGKIEDVLVKVDKFIFPADFIEVPIILGRP 133
Query: 200 -----------KKEDVLVQVNNDEVKFNVLDAMKLLGDLEEFSVINASNYASFCEFYDLL 236
+K ++ ++VN+++V FNVLDAM+L D+EE S I A E ++
Sbjct: 134 FLATGYTVFNVRKGEITMKVNDEQVTFNVLDAMRLPDDVEECSTIG----AIMEELQQMI 193
BLAST of Moc09g18250 vs. NCBI nr
Match:
XP_022156545.1 (uncharacterized protein LOC111023423 [Momordica charantia])
HSP 1 Score: 147.5 bits (371), Expect = 1.4e-31
Identity = 85/167 (50.90%), Postives = 101/167 (60.48%), Query Frame = 0
Query: 80 RKKKIREHQMVVMTKCSRKVVGNPLHIKCKYPDSFIIPCSIGGKNLSKALCDLSPSINLM 139
+KKK+ EH+MV M KC + VG+PL IKCK P SF IPCSIGGKNL +ALCDL SINL+
Sbjct: 68 KKKKLGEHEMVAMAKCISEAVGSPLPIKCKDPGSFTIPCSIGGKNLGRALCDLGASINLV 127
Query: 140 HLSVFKELSIRKARPTTVILQLAERSIKKPKGK--------------------------- 199
LSVFKEL I +ARPTTV LQLA+RSIKKP+GK
Sbjct: 128 PLSVFKELCIGEARPTTVTLQLADRSIKKPEGKIEVVPVQVDKFIFPAGFIILDCEADLD 187
Query: 200 -------------------KKEDVLVQVNNDEVKFNVLDAMKLLGDL 201
+K ++ ++VNN+EVKFNVLDAMKL GDL
Sbjct: 188 VPIILGRPFLATGDTVFNVRKREITMKVNNEEVKFNVLDAMKLSGDL 234
BLAST of Moc09g18250 vs. ExPASy TrEMBL
Match:
A0A6J1DTH7 (uncharacterized protein LOC111022971 OS=Momordica charantia OX=3673 GN=LOC111022971 PE=4 SV=1)
HSP 1 Score: 197.6 bits (501), Expect = 5.9e-47
Identity = 134/314 (42.68%), Postives = 166/314 (52.87%), Query Frame = 0
Query: 1 MGQLANQMKSRSQGSFSGHTEVPKGEGKEQCKAVTLRSRLVHKGPKMPKLMHR------N 60
+GQL+N +K+R QGSF HTEVPK +GKEQCKAVTLRS L ++ PKMP + + N
Sbjct: 8 IGQLSNDLKARPQGSFPWHTEVPKRDGKEQCKAVTLRSGLSYERPKMPVEVEKPSTSIQN 67
Query: 61 PPHQSR---------------------------LPQVNKRKKKPPQ------------VV 120
P ++ PQ+ +K + Q +
Sbjct: 68 SPSEAEKEKTTSGEGEASGASSQENSSFLLIPPFPQILAKKNQETQFRKFLDILKQLHIN 127
Query: 121 APLL------------------RKKKIREHQMVVMTKCSRKVVGNPLHIKCKYPDSFIIP 180
PLL RKKK+ EH+MV MTKCS + VG+PL IKCK PDSF IP
Sbjct: 128 IPLLDALEQMPNYAKFLKDIVSRKKKLGEHEMVAMTKCSSEAVGSPLPIKCKDPDSFTIP 187
Query: 181 CSIGGKNLSKALCDLSPSINLMHLSVFKELSIRKARPTTVILQLAERSIKKPKGK----- 207
CSIGGKNL +ALCDL SINLM LSVFKEL I +ARPTTV LQLA+RSIKKP+GK
Sbjct: 188 CSIGGKNLGRALCDLGASINLMPLSVFKELGIGEARPTTVTLQLADRSIKKPEGKIKDKF 247
BLAST of Moc09g18250 vs. ExPASy TrEMBL
Match:
A0A6J1D1N1 (uncharacterized protein LOC111016189 OS=Momordica charantia OX=3673 GN=LOC111016189 PE=4 SV=1)
HSP 1 Score: 175.6 bits (444), Expect = 2.4e-40
Identity = 111/219 (50.68%), Postives = 133/219 (60.73%), Query Frame = 0
Query: 1 MGQLANQMKSRSQGSFSGHTEVPKGEGKEQCKAVTLRSRLVHKGPKMP------------ 60
+GQ AN +K+R QGSF HT+VPK +GKEQCKA+TLRS L ++ PKMP
Sbjct: 8 VGQHANDLKARPQGSFPRHTKVPKRDGKEQCKAITLRSGLSYEEPKMPVEVEKPSTSIQN 67
Query: 61 ----------------------------KLMHRNPPHQSRLPQVNKRKKKPPQVVAPLLR 120
K +H N P L Q++ K +V+
Sbjct: 68 ALSEVETEKTTSSKKNQETQFRKFLDILKQLHINIPLVDALEQMSNYAKFLKDIVS---I 127
Query: 121 KKKIREHQMVVMTKCSRKVVGNPLHIKCKYPDSFIIPCSIGGKNLSKALCDLSPSINLMH 180
KKK+ EH+MV MTKCS + VG+PL I+CK P SF IPC IGGKNL +ALCDL SINLM
Sbjct: 128 KKKLGEHEMVAMTKCSSEAVGSPLPIQCKDPGSFTIPCPIGGKNLGRALCDLGDSINLMP 187
BLAST of Moc09g18250 vs. ExPASy TrEMBL
Match:
A0A6J1DZC3 (uncharacterized protein LOC111024449 OS=Momordica charantia OX=3673 GN=LOC111024449 PE=4 SV=1)
HSP 1 Score: 162.2 bits (409), Expect = 2.7e-36
Identity = 110/290 (37.93%), Postives = 154/290 (53.10%), Query Frame = 0
Query: 1 MGQLANQMKSRSQGSFSGHTEVPKGEGKEQCKAVTLRSRLVHKGPKMPKLMHRNPPHQSR 60
MGQLA+++K+R +G+ TE PK EG+E CK +T RS L ++ PKMP+ P +
Sbjct: 295 MGQLASELKNRPRGTLPSATEEPKIEGREHCKTITTRSGLAYEEPKMPREGSSCPTKEK- 354
Query: 61 LPQVNKRKKKPPQVVAP---------LLRKKKIREHQMVVMTKCSRKVVGNPLHIKCKYP 120
+ +P ++ P + RKKK+ E++ V +T+CS V + + K K P
Sbjct: 355 --ETATEPDEPIEIEMPTYAKFLKDIITRKKKLGEYETVALTECSSNVFKSKMSPKLKDP 414
Query: 121 DSFIIPCSIGGKNLSKALCDLSPSINLMHLSVFKELSIRKARPTTVILQLAERSIKKPKG 180
SF IPCSIGGK++ +ALCDL SINLM LS+FK+L I KA PTTV LQLA+RSI KP+G
Sbjct: 415 GSFTIPCSIGGKDVGRALCDLRASINLMPLSIFKKLEIGKASPTTVTLQLADRSITKPEG 474
Query: 181 K----------------------------------------------KKEDVLVQVNNDE 236
K KK ++ + V++ +
Sbjct: 475 KIEDVLVKVDKFIFPADFIILNCEADKDVPIILGRPFLSTGETLIDVKKGELTMHVDDQK 534
BLAST of Moc09g18250 vs. ExPASy TrEMBL
Match:
A0A6J1DBX0 (uncharacterized protein LOC111018901 OS=Momordica charantia OX=3673 GN=LOC111018901 PE=4 SV=1)
HSP 1 Score: 147.9 bits (372), Expect = 5.3e-32
Identity = 90/194 (46.39%), Postives = 113/194 (58.25%), Query Frame = 0
Query: 80 RKKKIREHQMVVMTKCSRKVVGNPLHIKCKYPDSFIIPCSIGGKNLSKALCDLSPSINLM 139
R KK+ EH+ V +TKCS +GNPL +KCK P SF IPCSI GKNL +ALCDL SINLM
Sbjct: 14 RHKKLDEHETVALTKCSSDALGNPLPVKCKDPGSFTIPCSIVGKNLGRALCDLGASINLM 73
Query: 140 HLSVFKELSIRKARPTTVILQLAERSIKKPKGK--------------------------- 199
LSVFKEL+IR+ARP TV LQLA RSIKKP+GK
Sbjct: 74 TLSVFKELNIREARPITVTLQLANRSIKKPEGKIEDVLVKVDKFIFPADFIEVPIILGRP 133
Query: 200 -----------KKEDVLVQVNNDEVKFNVLDAMKLLGDLEEFSVINASNYASFCEFYDLL 236
+K ++ ++VN+++V FNVLDAM+L D+EE S I A E ++
Sbjct: 134 FLATGYTVFNVRKGEITMKVNDEQVTFNVLDAMRLPDDVEECSTIG----AIMEELQQMI 193
BLAST of Moc09g18250 vs. ExPASy TrEMBL
Match:
A0A6J1DQL0 (uncharacterized protein LOC111023423 OS=Momordica charantia OX=3673 GN=LOC111023423 PE=4 SV=1)
HSP 1 Score: 147.5 bits (371), Expect = 7.0e-32
Identity = 85/167 (50.90%), Postives = 101/167 (60.48%), Query Frame = 0
Query: 80 RKKKIREHQMVVMTKCSRKVVGNPLHIKCKYPDSFIIPCSIGGKNLSKALCDLSPSINLM 139
+KKK+ EH+MV M KC + VG+PL IKCK P SF IPCSIGGKNL +ALCDL SINL+
Sbjct: 68 KKKKLGEHEMVAMAKCISEAVGSPLPIKCKDPGSFTIPCSIGGKNLGRALCDLGASINLV 127
Query: 140 HLSVFKELSIRKARPTTVILQLAERSIKKPKGK--------------------------- 199
LSVFKEL I +ARPTTV LQLA+RSIKKP+GK
Sbjct: 128 PLSVFKELCIGEARPTTVTLQLADRSIKKPEGKIEVVPVQVDKFIFPAGFIILDCEADLD 187
Query: 200 -------------------KKEDVLVQVNNDEVKFNVLDAMKLLGDL 201
+K ++ ++VNN+EVKFNVLDAMKL GDL
Sbjct: 188 VPIILGRPFLATGDTVFNVRKREITMKVNNEEVKFNVLDAMKLSGDL 234
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DTH7 | 5.9e-47 | 42.68 | uncharacterized protein LOC111022971 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A6J1D1N1 | 2.4e-40 | 50.68 | uncharacterized protein LOC111016189 OS=Momordica charantia OX=3673 GN=LOC111016... | [more] |
A0A6J1DZC3 | 2.7e-36 | 37.93 | uncharacterized protein LOC111024449 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A6J1DBX0 | 5.3e-32 | 46.39 | uncharacterized protein LOC111018901 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A6J1DQL0 | 7.0e-32 | 50.90 | uncharacterized protein LOC111023423 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
Match Name | E-value | Identity | Description | |