Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptide exon CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGAGATGACCGATCAGATGGCCAAGTTCGAGGCCACTATGAAGGAG GTCACTTCGCGAATTCATGATTACGAAGATCTAGAAGCCAAGACTCTTACTCTTTAGGAGGACCTGGACGCTGTGCGAGCTGAAAAGGAAGCCTTGGAAAAAGAGCTCATCACCCTGAAAACCAATCTGAAGGATGACAAGTTCTTTGAGGATATATTCAAAATTACTTCAACCTATGCGAGTTTTGCCAAAAACATCATAGATAGTGGGTTGAAATTTGCTGATGAGCTCCCATCCTCAGCTGGATTTCTCCCAACTAAAGAGAGCCTACATGGAGGAATGGACTACGATGCCTGA mRNA sequence
ATGGTTGAGATGACCGATCAGATGGCCAAGTTCGAGGCCACTATGAAGGAGGAGGACCTGGACGCTGTGCGAGCTGAAAAGGAAGCCTTGGAAAAAGAGCTCATCACCCTGAAAACCAATCTGAAGGATGACAAGTTCTTTGAGGATATATTCAAAATTACTTCAACCTATGCGAGTTTTGCCAAAAACATCATAGATAGTGGGTTGAAATTTGCTGATGAGCTCCCATCCTCAGCTGGATTTCTCCCAACTAAAGAGAGCCTACATGGAGGAATGGACTACGATGCCTGA Coding sequence (CDS)
ATGGTTGAGATGACCGATCAGATGGCCAAGTTCGAGGCCACTATGAAGGAGGAGGACCTGGACGCTGTGCGAGCTGAAAAGGAAGCCTTGGAAAAAGAGCTCATCACCCTGAAAACCAATCTGAAGGATGACAAGTTCTTTGAGGATATATTCAAAATTACTTCAACCTATGCGAGTTTTGCCAAAAACATCATAGATAGTGGGTTGAAATTTGCTGATGAGCTCCCATCCTCAGCTGGATTTCTCCCAACTAAAGAGAGCCTACATGGAGGAATGGACTACGATGCCTGA Protein sequence
MVEMTDQMAKFEATMKEEDLDAVRAEKEALEKELITLKTNLKDDKFFEDIFKITSTYASFAKNIIDSGLKFADELPSSAGFLPTKESLHGGMDYDA
Homology
BLAST of Moc09g17510 vs. NCBI nr
Match:
XP_022155848.1 (uncharacterized protein LOC111022872 [Momordica charantia] >XP_022155849.1 uncharacterized protein LOC111022872 [Momordica charantia])
HSP 1 Score: 61.6 bits (148), Expect = 4.2e-06
Identity = 39/91 (42.86%), Postives = 51/91 (56.04%), Query Frame = 0
Query: 1 MVEMTDQMAKFEATMKE-------------------EDLDAVRAEKEALEKELITLKTNL 60 M EM DQMAK +ATMKE +DLD+ RAEKE +EKE + L Sbjct: 30 MTEMNDQMAKCKATMKEVTERIHNFEALEAKTISLKQDLDSARAEKEVVEKEFRDICAKL 89 Query: 61 KDDKFFEDIFKITSTYASFAKNIIDSGLKFA 73 D K+ +++ K T +Y FAK+ + SGLKFA Sbjct: 90 SDGKYAKEMVKKTPSYTPFAKDFMGSGLKFA 120
BLAST of Moc09g17510 vs. ExPASy TrEMBL
Match:
A0A6J1DRG7 (uncharacterized protein LOC111022872 OS=Momordica charantia OX=3673 GN=LOC111022872 PE=4 SV=1)
HSP 1 Score: 61.6 bits (148), Expect = 2.0e-06
Identity = 39/91 (42.86%), Postives = 51/91 (56.04%), Query Frame = 0
Query: 1 MVEMTDQMAKFEATMKE-------------------EDLDAVRAEKEALEKELITLKTNL 60 M EM DQMAK +ATMKE +DLD+ RAEKE +EKE + L Sbjct: 30 MTEMNDQMAKCKATMKEVTERIHNFEALEAKTISLKQDLDSARAEKEVVEKEFRDICAKL 89 Query: 61 KDDKFFEDIFKITSTYASFAKNIIDSGLKFA 73 D K+ +++ K T +Y FAK+ + SGLKFA Sbjct: 90 SDGKYAKEMVKKTPSYTPFAKDFMGSGLKFA 120
The following BLAST results are available for this feature:
Match Name E-value Identity Description
XP_022155848.1 4.2e-06 42.86 uncharacterized protein LOC111022872 [Momordica charantia] >XP_022155849.1 uncha... [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A6J1DRG7 2.0e-06 42.86 uncharacterized protein LOC111022872 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
A T G G T T G A G A T G A C C G A T C A G A T G G C C A A G T T C G A G G C C A C T A T G A A G G A G G A G G A C C T G G A C G C T G T G C G A G C T G A A A A G G A A G C C T T G G A A A A A G A G C T C A T C A C C C T G A A A A C C A A T C T G A A G G A T G A C A A G T T C T T T G A G G A T A T A T T C A A A A T T A C T T C A A C C T A T G C G A G T T T T G C C A A A A A C A T C A T A G A T A G T G G G T T G A A A T T T G C T G A T G A G C T C C C A T C C T C A G C T G G A T T T C T C C C A A C T A A A G A G A G C C T A C A T G G A G G A A T G G A C T A C G A T G C C T G A 50 100 150 200 250 Score = Sequence Coil
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 8..40
Relationships
The following mRNA feature(s) are a part of this gene: