Moc09g16470 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g16470
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Protein TIC 214
Location	chr9: 13308758 .. 13311267 (+)
RNA-Seq Expression	Moc09g16470
Synteny	Moc09g16470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGGCAGAGGCCTTTGGTGTCCCCTCCAGTCAAGAATTGGGGCCTCACAATCGCTAGCCAATATGCTTTTCTCTCATGCCTTTCTTCGTTCATGGTTCGATATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTGCGGAAAAATAGCTCGACGCCAGGATGATAAAAAGCTTAACACCTCTAATTCTTATTACTTTTCAATATTCAATATGGAAAAAAAAATGAAAAATGAAAAGGTCGTCTTATTCAAAACCCCAATTATGAAACCCCTTCTCTCCCACTTTTCTCTCTCACTTCACACCTTGGAACGCACCGTTCTTATAGAGAGAGAGGCGCTTTCACATCTTCTTAACCCGAAATGGCAAATGGCTGGGGAGAGGAAAGGTTCCTTTTTTTAGGGTACCCCCGGGAACAGATCCAGTGGAGACGGGGTGGGGCCTGTAGCTCAGAGGATTAGAGCACGTGGCTACGAACCACGGTGTCGGGGGTTCGAATCCCTCCTCGCCCACAACCGGCCAAAAAGGGAAGGACTTTTCCCTCTGGGGGTAGGAAAATCATGATCGGGATAGCGGACCCAAAGCTATGGAACTTGGGTGTGGGTCTTTTGTCGAAATGGAATGGCCTTATCTTTTTCTTTTTTCTTTTTCGTTAATGGGTTAAGGGCGGGGGTTCCGTTATAAATTAAATATAGTATACCCACAGCATATTTTTTTGTTTTACGCCCCGTAATTCTTCCTCAGCCAGGCTTGGGCAGAATAGCAGAGCAAGTACAAGTATTAGTAGAATAGCAAAAATGTGTTCCTCGTCATTAATATGTTTGCTCGCGGTAATTGTGACCTCTCGGGAGAATCGATGACTGCATCTTTGATGCACTTGCTAGTACTAGTACATCTGATAATTCTTAATTGGCTAGTTGTAAATAGACCCAGACTGTGGAACAAAGGATTATCCCGGACCTACACCGAGGTATTGACGGTGATTCTCAAATATCGCAGAACAGAATTTGATACGATGAGATAGAATGCAATAGAAACAAAGACACAGGGAACGGGTTACCTACTCTTAACGGTCAAAGCGAACCCTTGAATTCCGAATTCTTTAATTCGGAATGAATCAAATCTCCCCAAGTAGGATTCGAACCTACGACCAGTCGGTTAACAGCCGACCGCTCTACCACTGAGCTACTGAGGAACAACGGGAAATTAGGTCTCATAGAATTCAATTCCCGTTCTCAACCCATGACCAATATGAGCTCGAGGTTTCCTTCGTAACTCCCGGAACTTCTTCGTAGTGGCTCCGTTCCATGCCTCATTTCATAGAGAACCTCAAAGTGGCTCTATTTCATTATATTCCATCCATATCCCAATTCCATTCATTTAATATCCCTGTGGTGTCATTGAGATAAGAGATGTCGTTTCTAGTCTATCTGTTTCTATTTCTATATATATGGAAAGTTCAAAAATCATCATATAATAATCCAGAAATTGCAATAGAAAAGAAAAAGGGAGGTTTGTGATGATTTTCAAATCTTTTCTACTAGGTAATCTAGTATCCTTATGCATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTATCTTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACTACCAGAAACTCAATGCGTAATCTTAGCATTCAATGTGTATTCCTGAATAATCTCATTTTTAAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGTCAGATTAGTCAACATTTCTATGTTTCGATGCAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGGTTGGTTAATTGGTCACATTTTATTCATGAAATGGGTTGGATTGATATTAGTCTGGATACAGCAAAATAATTCTATTAGATCTAATGTACTTATTAGATCTAATAAGTACCTTGTGTCAGAATTGATAAATTCTATGGCTCGAATCTTTAGTATTCTCTTATTTATTACCTGTGTCTACTATTTAGGTAGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGGGGAAAGCGAGGAAGAAACAGATGTAGAAATAGAAACCACTTCCGAAACGAAGGGACTAAACAGGAACAAGAGGGATCCACCGAAGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCGGACAAAATCGATGAAACGGAAGAGATCCGAGTGA

mRNA sequence

ATGGAAGGGCAGAGGCCTTTGGTGTCCCCTCCAGTCAAGAATTGGGGCCTCACAATCGCTAGCCAATATGCTTTTCTCTCATGCCTTTCTTCGTTCATGGTTCGATATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGGGTACCCCCGGGAACAGATCCAGTGGAGACGGGGTGGGGCCTGTAGCTCAGAGGATTAGAGCACGTGGCTACGAACCACGGTGTCGGGGGTTCGAATCCCTCCTCGCCCACAACCGGCCAAAAAGGGAAGGACTTTTCCCTCTGGGGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTAGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGGGGAAAGCGAGGAAGAAACAGATGTAGAAATAGAAACCACTTCCGAAACGAAGGGACTAAACAGGAACAAGAGGGATCCACCGAAGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCGGACAAAATCGATGAAACGGAAGAGATCCGAGTGA

Coding sequence (CDS)

ATGGAAGGGCAGAGGCCTTTGGTGTCCCCTCCAGTCAAGAATTGGGGCCTCACAATCGCTAGCCAATATGCTTTTCTCTCATGCCTTTCTTCGTTCATGGTTCGATATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGGGTACCCCCGGGAACAGATCCAGTGGAGACGGGGTGGGGCCTGTAGCTCAGAGGATTAGAGCACGTGGCTACGAACCACGGTGTCGGGGGTTCGAATCCCTCCTCGCCCACAACCGGCCAAAAAGGGAAGGACTTTTCCCTCTGGGGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTAGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGGGGAAAGCGAGGAAGAAACAGATGTAGAAATAGAAACCACTTCCGAAACGAAGGGACTAAACAGGAACAAGAGGGATCCACCGAAGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCGGACAAAATCGATGAAACGGAAGAGATCCGAGTGA

Protein sequence

MEGQRPLVSPPVKNWGLTIASQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLLAHNRPKREGLFPLGIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGLNRNKRDPPKKILLLPFFRKKRRIRTKSMKRKRSE

Homology

[Close]

BLAST of Moc09g16470 vs. NCBI nr
Match: CAA7014164.1 (unnamed protein product [Microthlaspi erraticum] >CAA7015545.1 unnamed protein product [Microthlaspi erraticum] >CAA7021836.1 unnamed protein product [Microthlaspi erraticum] >CAA7022817.1 unnamed protein product [Microthlaspi erraticum] >CAA7035220.1 unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 218.0 bits (554), Expect = 8.6e-53
Identity = 104/114 (91.23%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 1   MEGQRPLVSPPVKNWGLTIASQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGD 60
           MEG+RPLVS PVKNW LTI SQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGD
Sbjct: 1   MEGRRPLVSTPVKNWSLTITSQYAFLACLSSFMVRYSGVLGVEEQHQSIPNLVVKLYCGD 60

Query: 61  DTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLLAHNRPKREGLFPLG 115
           DTVGEGTPGN SSGDGVG VAQRIRARGYEPRCRGFESLLAHNRPKREG FP G
Sbjct: 61  DTVGEGTPGNTSSGDGVGLVAQRIRARGYEPRCRGFESLLAHNRPKREGPFPPG 114

[Close]

BLAST of Moc09g16470 vs. NCBI nr
Match: CAA7012819.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 214.5 bits (545), Expect = 9.5e-52
Identity = 103/114 (90.35%), Postives = 105/114 (92.11%), Query Frame = 0


Query: 1   MEGQRPLVSPPVKNWGLTIASQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGD 60
           MEG+R LVS PVKNW LTI SQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGD
Sbjct: 1   MEGRRHLVSTPVKNWSLTITSQYAFLACLSSFMVRYSGVLGVEEQHQSIPNLVVKLYCGD 60

Query: 61  DTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLLAHNRPKREGLFPLG 115
           DTVGEGTPGN SSGDGVG VAQRIRARGYEPRCRGFESLLAHNRPKREG FP G
Sbjct: 61  DTVGEGTPGNTSSGDGVGLVAQRIRARGYEPRCRGFESLLAHNRPKREGPFPPG 114

[Close]

BLAST of Moc09g16470 vs. NCBI nr
Match: PPS02855.1 (hypothetical protein GOBAR_AA17807 [Gossypium barbadense])

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-51
Identity = 105/116 (90.52%), Postives = 107/116 (92.24%), Query Frame = 0


Query: 1   MEGQRPLVSPPVKNWGLTIASQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYC 60
           MEG+RPLVSPPVKNWGL I SQYA  FL+ LSSFMVRYSGVLGVEE HQSIPNLVVKLYC
Sbjct: 1   MEGRRPLVSPPVKNWGLIITSQYAFPFLARLSSFMVRYSGVLGVEEQHQSIPNLVVKLYC 60

Query: 61  GDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLLAHNRPKREGLFPLG 115
            DDTVGEGTPGNRSSGD VGPVAQRIRARGYEPRCRGFESLLAHNRPKREG FPLG
Sbjct: 61  VDDTVGEGTPGNRSSGDEVGPVAQRIRARGYEPRCRGFESLLAHNRPKREGPFPLG 116

[Close]

BLAST of Moc09g16470 vs. NCBI nr
Match: RZC75017.1 (hypothetical protein C5167_050499 [Papaver somniferum])

HSP 1 Score: 188.3 bits (477), Expect = 7.3e-44
Identity = 133/270 (49.26%), Postives = 147/270 (54.44%), Query Frame = 0


Query: 1   MEGQRPLVSPPVKNWGLTIASQ---YAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLY 60
           MEGQRPLVSPPVKNWGLTI SQ   YAF+SCL SFMVRYSGVLGVEEPHQSIPNLVVKLY
Sbjct: 1   MEGQRPLVSPPVKNWGLTITSQYNKYAFISCLYSFMVRYSGVLGVEEPHQSIPNLVVKLY 60

Query: 61  CGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLLAHNRPKREGLFPLGIIN 120
           CGDDTVGE           +G +   I           F++LL         L  L +IN
Sbjct: 61  CGDDTVGE----------PLGRIDDCI-----------FDALLV--------LVHLRMIN 120

Query: 121 SVVV---VGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTG-------------- 180
            +VV     +    +     GPSYLFLLRARVMEEGTEK+VSATTG              
Sbjct: 121 WLVVNSPRAMEQRIIPDLHRGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYY 180

Query: 181 ---------------------------------------------RIPSPIVTKKLK-ET 205
                                                        R+PSPIVTKKLK ET
Sbjct: 181 APLHLALGRPHTITVLVLPYLLFHFFWNNHKNVFDYGSTTRNSMRRMPSPIVTKKLKEET 240

[Close]

BLAST of Moc09g16470 vs. NCBI nr
Match: MBA0613618.1 (hypothetical protein [Gossypium davidsonii])

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-43
Identity = 93/117 (79.49%), Postives = 100/117 (85.47%), Query Frame = 0


Query: 1   MEGQRPLVSPPVKNWGLTIASQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYC 60
           MEG+RPLVSP VKNWG+ I SQYA  F + LSSFMV+YSGVLGVEE H SI NLVVKLYC
Sbjct: 1   MEGRRPLVSPLVKNWGIIITSQYAFPFPARLSSFMVQYSGVLGVEEQHLSILNLVVKLYC 60

Query: 61  GDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLLAHNRPKREGLFPLGI 116
           GDDTVGEGT GNRS+GD VGP+AQRIRA GYEPRC GFE LL HNRPKREG FPLG+
Sbjct: 61  GDDTVGEGTLGNRSNGDEVGPIAQRIRACGYEPRCCGFEFLLVHNRPKREGPFPLGV 117

[Close]

BLAST of Moc09g16470 vs. ExPASy Swiss-Prot
Match: A6MM95 (Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-17
Identity = 47/53 (88.68%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 115 IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGRIPSPIV 168
           IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTG I   ++
Sbjct: 18  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLM 70

HSP 2 Score: 67.0 bits (162), Expect = 3.2e-10
Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 0


Query: 160 GRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGLNRNK 205
           GR+P+PIVTKKLKETS+TEERGESEEE DVEIETTSETKG  + +
Sbjct: 235 GRMPAPIVTKKLKETSKTEERGESEEERDVEIETTSETKGTKQEQ 279

[Close]

BLAST of Moc09g16470 vs. ExPASy Swiss-Prot
Match: A0A393 (Protein TIC 214 OS=Coffea arabica OX=13443 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-17
Identity = 47/53 (88.68%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 115 IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGRIPSPIV 168
           IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTG I   ++
Sbjct: 18  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLM 70

HSP 2 Score: 59.3 bits (142), Expect = 6.7e-08
Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 0


Query: 160 GRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGLNRNK 205
           GRIPSPI+TKKLKETS+TEE  ESEEE DVEIETTSE KG  + +
Sbjct: 235 GRIPSPILTKKLKETSKTEEGVESEEEGDVEIETTSEMKGTKQEQ 279

[Close]

BLAST of Moc09g16470 vs. ExPASy Swiss-Prot
Match: Q7YJS6 (Protein TIC 214 OS=Calycanthus floridus var. glaucus OX=212734 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.5e-17
Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 115 IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGRIPSPIV 168
           IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEK+VSATTG I   ++
Sbjct: 18  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLM 70

HSP 2 Score: 52.4 bits (124), Expect = 8.2e-06
Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 160 GRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGLNRNKR 206
           GRIPSPI+TKKLKETSETEE  E+E+ET+VEIE  SE K   + ++
Sbjct: 235 GRIPSPILTKKLKETSETEEGEENEDETNVEIEKFSEAKETKQEQK 280

[Close]

BLAST of Moc09g16470 vs. ExPASy Swiss-Prot
Match: A6MMQ5 (Protein TIC 214 OS=Dioscorea elephantipes OX=145284 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.5e-17
Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 115 IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGRIPSPIV 168
           IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEK+VSATTG I   ++
Sbjct: 18  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLM 70

HSP 2 Score: 49.7 bits (117), Expect = 5.3e-05
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0


Query: 160 GRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETK 199
           GR+PSPIVTKKLKE SETEE GESEEE++V  ETT ET+
Sbjct: 233 GRMPSPIVTKKLKEISETEEGGESEEESNV--ETTFETR 269

[Close]

BLAST of Moc09g16470 vs. ExPASy Swiss-Prot
Match: Q09FY8 (Protein TIC 214 OS=Platanus occidentalis OX=4403 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.5e-17
Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 115 IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGRIPSPIV 168
           IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEK+VSATTG I   ++
Sbjct: 18  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLM 70

HSP 2 Score: 55.1 bits (131), Expect = 1.3e-06
Identity = 29/39 (74.36%), Postives = 36/39 (92.31%), Query Frame = 0


Query: 160 GRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETK 199
           GR+PS +VTKK+KETS+ ++ G+SEEETDVEIETTSETK
Sbjct: 244 GRMPSTLVTKKMKETSKMKQMGQSEEETDVEIETTSETK 282

[Close]

BLAST of Moc09g16470 vs. ExPASy TrEMBL
Match: A0A6N2NAY5 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS480550 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.5e-55
Identity = 107/115 (93.04%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MEGQRPLVSPPVKNWGLTIASQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGD 60
           MEGQRPLVSP VKNWGLTI SQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCG+
Sbjct: 489 MEGQRPLVSPTVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGE 548

Query: 61  DTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLLAHNRPKREGLFPLGI 116
           DTVGEG PGNRSSGD VGPVAQRIRARGYEPRCRGFESLLAHNRPKREG FPL +
Sbjct: 549 DTVGEGIPGNRSSGDEVGPVAQRIRARGYEPRCRGFESLLAHNRPKREGPFPLEV 603

[Close]

BLAST of Moc09g16470 vs. ExPASy TrEMBL
Match: A0A6D2K9K4 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS10052 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 4.2e-53
Identity = 104/114 (91.23%), Postives = 106/114 (92.98%), Query Frame = 0


Query: 1   MEGQRPLVSPPVKNWGLTIASQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGD 60
           MEG+RPLVS PVKNW LTI SQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGD
Sbjct: 1   MEGRRPLVSTPVKNWSLTITSQYAFLACLSSFMVRYSGVLGVEEQHQSIPNLVVKLYCGD 60

Query: 61  DTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLLAHNRPKREGLFPLG 115
           DTVGEGTPGN SSGDGVG VAQRIRARGYEPRCRGFESLLAHNRPKREG FP G
Sbjct: 61  DTVGEGTPGNTSSGDGVGLVAQRIRARGYEPRCRGFESLLAHNRPKREGPFPPG 114

[Close]

BLAST of Moc09g16470 vs. ExPASy TrEMBL
Match: A0A6D2HAQ3 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS53 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 4.6e-52
Identity = 103/114 (90.35%), Postives = 105/114 (92.11%), Query Frame = 0


Query: 1   MEGQRPLVSPPVKNWGLTIASQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGD 60
           MEG+R LVS PVKNW LTI SQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGD
Sbjct: 1   MEGRRHLVSTPVKNWSLTITSQYAFLACLSSFMVRYSGVLGVEEQHQSIPNLVVKLYCGD 60

Query: 61  DTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLLAHNRPKREGLFPLG 115
           DTVGEGTPGN SSGDGVG VAQRIRARGYEPRCRGFESLLAHNRPKREG FP G
Sbjct: 61  DTVGEGTPGNTSSGDGVGLVAQRIRARGYEPRCRGFESLLAHNRPKREGPFPPG 114

[Close]

BLAST of Moc09g16470 vs. ExPASy TrEMBL
Match: A0A2P5XHN3 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA17807 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 7.8e-52
Identity = 105/116 (90.52%), Postives = 107/116 (92.24%), Query Frame = 0


Query: 1   MEGQRPLVSPPVKNWGLTIASQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYC 60
           MEG+RPLVSPPVKNWGL I SQYA  FL+ LSSFMVRYSGVLGVEE HQSIPNLVVKLYC
Sbjct: 1   MEGRRPLVSPPVKNWGLIITSQYAFPFLARLSSFMVRYSGVLGVEEQHQSIPNLVVKLYC 60

Query: 61  GDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLLAHNRPKREGLFPLG 115
            DDTVGEGTPGNRSSGD VGPVAQRIRARGYEPRCRGFESLLAHNRPKREG FPLG
Sbjct: 61  VDDTVGEGTPGNRSSGDEVGPVAQRIRARGYEPRCRGFESLLAHNRPKREGPFPLG 116

[Close]

BLAST of Moc09g16470 vs. ExPASy TrEMBL
Match: A0A4Y7KQA8 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_050499 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 3.5e-44
Identity = 133/270 (49.26%), Postives = 147/270 (54.44%), Query Frame = 0


Query: 1   MEGQRPLVSPPVKNWGLTIASQ---YAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLY 60
           MEGQRPLVSPPVKNWGLTI SQ   YAF+SCL SFMVRYSGVLGVEEPHQSIPNLVVKLY
Sbjct: 1   MEGQRPLVSPPVKNWGLTITSQYNKYAFISCLYSFMVRYSGVLGVEEPHQSIPNLVVKLY 60

Query: 61  CGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLLAHNRPKREGLFPLGIIN 120
           CGDDTVGE           +G +   I           F++LL         L  L +IN
Sbjct: 61  CGDDTVGE----------PLGRIDDCI-----------FDALLV--------LVHLRMIN 120

Query: 121 SVVV---VGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTG-------------- 180
            +VV     +    +     GPSYLFLLRARVMEEGTEK+VSATTG              
Sbjct: 121 WLVVNSPRAMEQRIIPDLHRGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYY 180

Query: 181 ---------------------------------------------RIPSPIVTKKLK-ET 205
                                                        R+PSPIVTKKLK ET
Sbjct: 181 APLHLALGRPHTITVLVLPYLLFHFFWNNHKNVFDYGSTTRNSMRRMPSPIVTKKLKEET 240

[Close]

BLAST of Moc09g16470 vs. TAIR 10
Match: ATCG01130.1 (Ycf1 protein )

HSP 1 Score: 86.3 bits (212), Expect = 3.6e-17
Identity = 47/56 (83.93%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 115 IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGRIPSPIV 168
           IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM   EEGTEKKVSATTG I   ++
Sbjct: 19  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEKKVSATTGFIAGQLM 74

[Close]

BLAST of Moc09g16470 vs. TAIR 10
Match: ATCG01000.1 (Ycf1 protein )

HSP 1 Score: 86.3 bits (212), Expect = 3.6e-17
Identity = 47/56 (83.93%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 115 IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGRIPSPIV 168
           IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM   EEGTEKKVSATTG I   ++
Sbjct: 19  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEKKVSATTGFIAGQLM 74

[Close]

BLAST of Moc09g16470 vs. TAIR 10
Match: ATMG00370.1 (Ycf1 protein )

HSP 1 Score: 86.3 bits (212), Expect = 3.6e-17
Identity = 47/56 (83.93%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 115 IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGRIPSPIV 168
           IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM   EEGTEKKVSATTG I   ++
Sbjct: 18  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMDEGEEGTEKKVSATTGFIAGQLM 73

[Close]

BLAST of Moc09g16470 vs. TAIR 10
Match: AT2G07739.1 (Ycf1 protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.8e-16
Identity = 46/56 (82.14%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 115 IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGRIPSPIV 168
           IINSVVVVGLYYGFLTTFSIGP YLFLLRARVM   EEGTEKKVSATTG I   ++
Sbjct: 18  IINSVVVVGLYYGFLTTFSIGPFYLFLLRARVMDEGEEGTEKKVSATTGFIAGQLM 73

The following BLAST results are available for this feature:

BLAST of Moc09g16470 vs. NCBI nr


Match Name	E-value	Identity	Description
CAA7014164.1	8.6e-53	91.23	unnamed protein product [Microthlaspi erraticum] >CAA7015545.1 unnamed protein p...	[more]
CAA7012819.1	9.5e-52	90.35	unnamed protein product [Microthlaspi erraticum]	[more]
PPS02855.1	1.6e-51	90.52	hypothetical protein GOBAR_AA17807 [Gossypium barbadense]	[more]
RZC75017.1	7.3e-44	49.26	hypothetical protein C5167_050499 [Papaver somniferum]	[more]
MBA0613618.1	1.2e-43	79.49	hypothetical protein [Gossypium davidsonii]	[more]

BLAST of Moc09g16470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A6MM95	1.2e-17	88.68	Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1	[more]
A0A393	1.2e-17	88.68	Protein TIC 214 OS=Coffea arabica OX=13443 GN=TIC214 PE=3 SV=1	[more]
Q7YJS6	3.5e-17	86.79	Protein TIC 214 OS=Calycanthus floridus var. glaucus OX=212734 GN=TIC214 PE=3 SV...	[more]
A6MMQ5	3.5e-17	86.79	Protein TIC 214 OS=Dioscorea elephantipes OX=145284 GN=TIC214 PE=3 SV=1	[more]
Q09FY8	3.5e-17	86.79	Protein TIC 214 OS=Platanus occidentalis OX=4403 GN=TIC214 PE=3 SV=1	[more]

BLAST of Moc09g16470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6N2NAY5	1.5e-55	93.04	Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS480550 PE=4 SV=...	[more]
A0A6D2K9K4	4.2e-53	91.23	Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS10052 ...	[more]
A0A6D2HAQ3	4.6e-52	90.35	Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS53 PE=...	[more]
A0A2P5XHN3	7.8e-52	90.52	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA17807 PE=4 SV...	[more]
A0A4Y7KQA8	3.5e-44	49.26	Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_050499 PE=4 SV=1	[more]

BLAST of Moc09g16470 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01130.1	3.6e-17	83.93	Ycf1 protein	[more]
ATCG01000.1	3.6e-17	83.93	Ycf1 protein	[more]
ATMG00370.1	3.6e-17	83.93	Ycf1 protein	[more]
AT2G07739.1	1.8e-16	82.14	Ycf1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008896	Protein TIC214	PFAM	PF05758	Ycf1	coord: 118..162 e-value: 2.2E-22 score: 78.8 coord: 160..205 e-value: 1.2E-12 score: 46.6
IPR008896	Protein TIC214	PANTHER	PTHR33163	PROTEIN TIC 214-RELATED	coord: 115..162 coord: 160..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..207
None	No IPR available	PANTHER	PTHR33163:SF13	PROTEIN TIC 214-RELATED	coord: 160..205
None	No IPR available	PANTHER	PTHR33163:SF13	PROTEIN TIC 214-RELATED	coord: 115..162
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..28 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g16470.1	Moc09g16470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane