Moc09g16420 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g16420
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionOrf102b protein
Locationchr9: 13300718 .. 13302076 (-)
RNA-Seq ExpressionMoc09g16420
SyntenyMoc09g16420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAAACCGCTGATTCCACAGTTCCTTCATCAGATTTGGGTGCGTTTGAAAGAGCTGCTTCCCCTGCTGATATGATAGGTGACTCAACGGATACTACTAAAAAATTTCCCATAGTTTCTCATGGAAGGAAATGGGATTTTTGAGAAAAGGGGTTGGGAACCATCGAAAGACTAGCAACCTGACAGTCCTAAGCAACCTGGAACCAACAACGTTACATATACCATACTGCTATAGAAGACATGAATACCAGTTAGACTACGGGACGCGTACACCCGCAATTGGTGAGCAACTTACTGCCCTTTAAGTCAAGAGCTAGTAGTACTATCAGCATCAGCAAAGGATATCGTAATTATGGCGAATACGTTTTTCTTGCTTGCCACATACCCGGAATACGAACTAAGCAAGAACATGTGAACTAAGCCCAGGGGATGATCGAGGATTGAAGGTCTGGAATTGTGGACACAGGGAGGGCGGAGGCATACCAGGCTTAATAACGACTAAAGTTGGACGACCGGGAAATAGCACTGAACAAGCAAGGGCTAAAAGCTTCTTTTACCCAGTCTTCTCCCATAGGCTCAGAAGAGGGTCAATACGATCCCTTTAAGATAAGAAAGAACAAAAAATTCGACTATCAGAGCCTTTTAAAGAGGTACAGGGGTGTGGGTGTACTTTAAGGGTGATTTTTACTTCGAAAGCCATGAGCCCCATTTACGAAAGCCTAAGCCTACGGAACAAACTTGCTCCTTTTGATTAACTCGTCGCTACTTCTGACCCCTCGTAGTACCCTCTCTTTCTCAATCTGACTCTTCCATGTACTCGACACGGATTCCCAAGCTTCGGGAGGAGAAGGAGGATCTTACAACTACATCATTATTTATTACAACATCTTACAACACAACATATTAAAATGAGAATGACAGAAGCCCGCTAAACAAGCACTGATTGGTAAATAAGCGCTGAAGCTGCTAAAAGCACAAAAATAGGTAAAGGAATGGAAGCACATCTTGCACCTTCTATGATCCATTCAACCTGCCTTCAAGATGAGAGATAGGCCTTTAGCAAGGGGATATCGCACGGAAAGCCGGATTAGGTCTTATCATCTTCAACTGATTTTACAGGCCTTAGTCCCTTAAGGAGATTACTTTAACACAGCCTGAGGCTTAAGAAAAGATGGCCAACGTTGTGACATCTTAGCCAGAGAAGAGCAACAGGAGCTATATTCAAGGAAGTTATGGACTGGAATCAGAGATTGGATGGACATCCGAAACGGAGAGGAAAAAGAGGAAGCAAACAAGGCTAGCTCACGAAAGAAAGCCTTGCAACTACGCTATATATTGATATTGCAACTGCGCTAA

mRNA sequence

ATGAAAGAAACCGCTGATTCCACAGTTCCTTCATCAGATTTGGGTGCGTTTGAAAGAGCTGCTTCCCCTGCTGATATGATAGCCAGAGAAGAGCAACAGGAGCTATATTCAAGGAAGTTATGGACTGGAATCAGAGATTGGATGGACATCCGAAACGGAGAGGAAAAAGAGGAAGCAAACAAGGCTAGCTCACGAAAGAAAGCCTTGCAACTACGCTATATATTGATATTGCAACTGCGCTAA

Coding sequence (CDS)

ATGAAAGAAACCGCTGATTCCACAGTTCCTTCATCAGATTTGGGTGCGTTTGAAAGAGCTGCTTCCCCTGCTGATATGATAGCCAGAGAAGAGCAACAGGAGCTATATTCAAGGAAGTTATGGACTGGAATCAGAGATTGGATGGACATCCGAAACGGAGAGGAAAAAGAGGAAGCAAACAAGGCTAGCTCACGAAAGAAAGCCTTGCAACTACGCTATATATTGATATTGCAACTGCGCTAA

Protein sequence

MKETADSTVPSSDLGAFERAASPADMIAREEQQELYSRKLWTGIRDWMDIRNGEEKEEANKASSRKKALQLRYILILQLR
Homology
[Close]
BLAST of Moc09g16420 vs. NCBI nr
Match: NP_064069.1 (orf102b gene product [Beta vulgaris subsp. vulgaris] >BAA99462.1 orf102b [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 72.8 bits (177), Expect = 1.5e-09
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0 

Query: 24 ADMIAREEQQELYSRKLWTGIRDWMDIRNGEEKEEANKASSRK 67
          +D +AREEQ+ELYSRKLWTGIRDWMDIRN   +EEANKASSRK
Sbjct: 19 SDFLAREEQEELYSRKLWTGIRDWMDIRN---REEANKASSRK 58

[Close]
BLAST of Moc09g16420 vs. NCBI nr
Match: YP_004222246.1 (hypothetical protein BevumaM_p007 [Beta vulgaris subsp. maritima] >YP_004842096.1 hypothetical protein BemaM_p049 [Beta macrocarpa] >CBJ20759.1 hypothetical protein [Beta vulgaris subsp. maritima] >CBL52003.1 hypothetical protein [Beta vulgaris subsp. maritima] >CBX24898.1 hypothetical protein [Beta macrocarpa] >CBX33223.1 hypothetical protein [Beta vulgaris subsp. maritima] >CBX33284.1 hypothetical protein [Beta vulgaris subsp. maritima])

HSP 1 Score: 72.8 bits (177), Expect = 1.5e-09
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0 

Query: 24 ADMIAREEQQELYSRKLWTGIRDWMDIRNGEEKEEANKASSRK 67
          +D +AREEQ+ELYSRKLWTGIRDWMDIRN   +EEANKASSRK
Sbjct: 19 SDFLAREEQEELYSRKLWTGIRDWMDIRN---REEANKASSRK 58

[Close]
BLAST of Moc09g16420 vs. ExPASy TrEMBL
Match: E6ZDV7 (Uncharacterized protein orf174b OS=Beta vulgaris subsp. maritima OX=350892 GN=orf174b PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.4e-10
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0 

Query: 24 ADMIAREEQQELYSRKLWTGIRDWMDIRNGEEKEEANKASSRK 67
          +D +AREEQ+ELYSRKLWTGIRDWMDIRN   +EEANKASSRK
Sbjct: 19 SDFLAREEQEELYSRKLWTGIRDWMDIRN---REEANKASSRK 58

[Close]
BLAST of Moc09g16420 vs. ExPASy TrEMBL
Match: G2XLR5 (Uncharacterized protein OS=Beta macrocarpa OX=343494 GN=orf174b PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.4e-10
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0 

Query: 24 ADMIAREEQQELYSRKLWTGIRDWMDIRNGEEKEEANKASSRK 67
          +D +AREEQ+ELYSRKLWTGIRDWMDIRN   +EEANKASSRK
Sbjct: 19 SDFLAREEQEELYSRKLWTGIRDWMDIRN---REEANKASSRK 58

[Close]
BLAST of Moc09g16420 vs. ExPASy TrEMBL
Match: Q9MF73 (Orf102b protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=orf102b PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.4e-10
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0 

Query: 24 ADMIAREEQQELYSRKLWTGIRDWMDIRNGEEKEEANKASSRK 67
          +D +AREEQ+ELYSRKLWTGIRDWMDIRN   +EEANKASSRK
Sbjct: 19 SDFLAREEQEELYSRKLWTGIRDWMDIRN---REEANKASSRK 58

The following BLAST results are available for this feature:
BLAST of Moc09g16420 vs. NCBI nr
Match NameE-valueIdentityDescription
NP_064069.11.5e-0981.40orf102b gene product [Beta vulgaris subsp. vulgaris] >BAA99462.1 orf102b [Beta v... [more]
YP_004222246.11.5e-0981.40hypothetical protein BevumaM_p007 [Beta vulgaris subsp. maritima] >YP_004842096.... [more]
BLAST of Moc09g16420 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc09g16420 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
E6ZDV77.4e-1081.40Uncharacterized protein orf174b OS=Beta vulgaris subsp. maritima OX=350892 GN=or... [more]
G2XLR57.4e-1081.40Uncharacterized protein OS=Beta macrocarpa OX=343494 GN=orf174b PE=4 SV=1[more]
Q9MF737.4e-1081.40Orf102b protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=orf102b PE=4 SV=1[more]
BLAST of Moc09g16420 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 52..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g16420.1Moc09g16420.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion