Moc09g16180 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g16180
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr9: 13221546 .. 13223597 (+)
RNA-Seq ExpressionMoc09g16180
SyntenyMoc09g16180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACATCCGGAATTGCCAAATCTCTCTTTCGCGCTCGAGAGAGAACCCGAAGATAGACTTGTTCTTATGGCTCTCGAAGCGATCTTGAATGAGAAACTCCATTCTGTTTTTCTTCCTTGTTCTTTTGCGTACCGAAAGAATAAGAATATACGAGATTTTGACGCTAAAGTCGTTGGATGGGGTCAGGTGAGCAGCCTTTTACTTTTTTCTTTTTCTGCGTCTACGATTAGGATTTCTCAATCTCGTCTATTATCAAAACTTGAAAGTAAAATTAACGATTCCTCGATTGTGCGACTTCTTTCTTCCTTTCTTCAGGTATCTATCATAGACAACAAAGGCACAAATTTGACAGGAATACCTGCACCCGTAGCTCCCATCATCACACCCATCTTATAGAATTTCTTTCTGATCGAGCATTTCGGGTGAGTTTTCCCCAATTCACACACGCTCGTTATTCTCATTTCGTCTTCGTGCCCATCTTTTTAGGACAGGACAAAGATTTTGCGCCGAGAAGGTTTTTAGAACTTTTGGCCGCGAGCTCGAGCTCAGTGGAACTCTAATGTGCATAGTGCCCGGTGGAGGACCTGTGGACTGTCTTGGAGGTATGATTTTTGTCACCGCGGAAGGGAATATCCAATTCGTGGAAAAAGAGGACTTGGATAGCAAGTCTTTTTTAAAAAGCTAGTTATACTATTATTATGGTGCCCCTTTTGATGTGATGGAATTATTGACCAGTAATTGTAATATGCCTATTCTGACGAAATGCTATTGATTTTAGGTTGTTATATTGCCGCGAACGGTGCGCTAATCCTTTGAATCCGGTACCAACGGGTATCATCCCTCCTAGAACAACGTTCTCTTTCAGACCTTTCAACCAGGAGAGCGGCTTTTGCTAAAACTCGAGCAGTTTCTTGAAAACTTGCTTCGGATATGAAAAAATGAGTATTTAGAGATGCTTTCGTTATTCCCAATAATATGGCTCGGTAACAGATCGCTTCTTCCAAAGCACCCCGTTCGTTCCGCTCGCAACAATCCAATTAGTTCTCCTGGTGAAAAAACATTAGACATTCCATCTTCTGAAACCAACACTTTTGATGTTATTTGACGTACAAGAATTTATATATGTCTATTATGGATCTCCACCCCCTGGGATCGAGAAACCTTTTGGTTCTTATTAACCAAAGAAATAAGGCTTTGCTGATCTTATTACTACTACATCCACTTGAACAATTCGAATTTGACTCGATTTTTGGTGTGGTCTTTCTTTGGCTATACATACATTTTCACAAAGAAACTGTCCAAGGCTAATTCTTGTGGGTCTTTCATCACAATAACTATGATGATAATTATGATGGAGAAAATGCCAATTCAAATTGAATGTATTCAAAACGATGTTACTGCATGGATCGGAATTAGAAATTCCCCCGTTTTCATCCAAACAATAATATTGTTTTGAAATTGTCAAGTTGAAAATATTTAGTTACCGAGATTTGATTATGAGTTATTAACTGAGAAAATGAACAAAAATTCGCAATTTGAGGAACAGCCCCTAAAGGTCCTAACGAATTCCTAATTGGAATTCGAGGATCTTTTTTAATTGATTCTTTTATCACATTCTAAGATTTTCCATCGTTGAATGGATCCATTTGAAAACAATTAGATGCTGACAAAATTCTCAAAGATTGGCGTTCTTTATTCCTATTCAACAACGAACGTACGAATAGTTCCTTGATTTTGACTAAGGGATTGTTGAACCCTTGCCTTGGAATAAATAGAATAAAATGGATTGATATTGGTGCGATCTGACTCATTATTAGAGATCAATCCTGAACCTGACGGATCGTTCCTTTTTCTGATATACGAAATATGATCGATTTAGCTAGTGTGAAGAAAAAGAAAGAAAAGCGCTTCCGGCCCAGGGATGTCCCCACACAGAGAGTTTGCCCCCCCGGGTATGTTTGCCATATATCGGGGTGGAAGATGGAATCGGGGCGGTTGGCTGCGGAGCCTGATGCAAGCCTTCCCCAGGCGGAATTCATATTTCAGTAG

mRNA sequence

ATGGAACATCCGGAATTGCCAAATCTCTCTTTCGCGCTCGAGAGAGAACCCGAAGATAGACTTGTTCTTATGGCTCTCGAAGCGATCTTGAATGAGAAACTCCATTCTGTTTTTCTTCCTTGTTCTTTTGCGTACCGAAAGAATAAGAATATACGAGATTTTGACGCTAAAGTCGTTGGATGGGGACAAAGATTTTGCGCCGAGAAGGTTTTTAGAACTTTTGGCCGCGAGCTCGAGCTCAGTGGAACTCTAATGTGCATAGTGCCCGGTGGAGGACCTGTGGACTGTCTTGGAGCTAGTGTGAAGAAAAAGAAAGAAAAGCGCTTCCGGCCCAGGGATGTCCCCACACAGAGAGTTTGCCCCCCCGGGTATGTTTGCCATATATCGGGGTGGAAGATGGAATCGGGGCGGTTGGCTGCGGAGCCTGATGCAAGCCTTCCCCAGGCGGAATTCATATTTCAGTAG

Coding sequence (CDS)

ATGGAACATCCGGAATTGCCAAATCTCTCTTTCGCGCTCGAGAGAGAACCCGAAGATAGACTTGTTCTTATGGCTCTCGAAGCGATCTTGAATGAGAAACTCCATTCTGTTTTTCTTCCTTGTTCTTTTGCGTACCGAAAGAATAAGAATATACGAGATTTTGACGCTAAAGTCGTTGGATGGGGACAAAGATTTTGCGCCGAGAAGGTTTTTAGAACTTTTGGCCGCGAGCTCGAGCTCAGTGGAACTCTAATGTGCATAGTGCCCGGTGGAGGACCTGTGGACTGTCTTGGAGCTAGTGTGAAGAAAAAGAAAGAAAAGCGCTTCCGGCCCAGGGATGTCCCCACACAGAGAGTTTGCCCCCCCGGGTATGTTTGCCATATATCGGGGTGGAAGATGGAATCGGGGCGGTTGGCTGCGGAGCCTGATGCAAGCCTTCCCCAGGCGGAATTCATATTTCAGTAG

Protein sequence

MEHPELPNLSFALEREPEDRLVLMALEAILNEKLHSVFLPCSFAYRKNKNIRDFDAKVVGWGQRFCAEKVFRTFGRELELSGTLMCIVPGGGPVDCLGASVKKKKEKRFRPRDVPTQRVCPPGYVCHISGWKMESGRLAAEPDASLPQAEFIFQ
Homology
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BLAST of Moc09g16180 vs. NCBI nr
Match: KAG7012780.1 (hypothetical protein SDJN02_25533, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 114.8 bits (286), Expect = 6.7e-22
Identity = 55/61 (90.16%), Postives = 58/61 (95.08%), Query Frame = 0 

Query: 1   MEHPELPNLSFALEREPEDRLVLMALEAILNEKLHSVFLPCSFAYRKNKNIRDFDAKVVG 60
           +EH ELPNLSFALERE +DRLVLMALEAILNEKLH V+LPCSFAYRKNKNIRDFDAKVVG
Sbjct: 597 VEHLELPNLSFALERESQDRLVLMALEAILNEKLHFVYLPCSFAYRKNKNIRDFDAKVVG 656

Query: 61  W 62
           W
Sbjct: 657 W 657

The following BLAST results are available for this feature:
BLAST of Moc09g16180 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7012780.16.7e-2290.16hypothetical protein SDJN02_25533, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Moc09g16180 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc09g16180 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc09g16180 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g16180.1Moc09g16180.1mRNA