Moc09g15860 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g15860
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Locationchr9: 13127866 .. 13136621 (-)
RNA-Seq ExpressionMoc09g15860
SyntenyMoc09g15860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAACGGATTTCATAACCACCATCCATCACCAATCACATTCCACATCCCACTTCAAACTTTTCGATTCCTCGGGGGGACTCCTCTATTCTATTTCGAGAAAGGCATTCCAGCTTCAAAGGCAGGTGAGCCGGGTCAGGAAGGAGTTTGACTGCTGGGATGGGATCGGATCCATCCTACTCGAAGCACTCCACCACGAATAAGAGTATTCGGGTTGGATAGGCAGTCGAGATAGGAACTCCTATCTGTAGGGCGGGCTTTCAAGACAGAGATGCACTACTCCATCTGGAAAGAGCTTTCCCTCGTGGAGAAAGAGAAGAACACCTTATTTAAAGGTAAGGCCAGAAGGGAGTCAAAAATCCATAGAAAAAATCCCTTCCCGGCCGACGGGACTCTACGTCTGGGTCTTATTCCATCTCAAACTCGGATTAGGAAGAGTGCCCTTGAACTACAGATCAATCATAATACACAATACAAAAAAATCAATCGATTCTCCTGCCGGCGAGAAAGAAAAAAAAGGGGGGGGGAAGAGGAGATTCAGGATAGTCACTCCACTCCATATCTCGTGAACACAGATTCTTGTTTCATTTTCAATTCCTTTCGTGCGTGTTTTTTTGATGATATCGTTTTCTAAGATAGGACAGGTCAGGGGCAGGGAGAAGGGCTTCTTCTGCTTTACAACCGGAATAAGGAACCTTAGAATGAACCCTACCTGTCGATCAAAAAATGGGATTGGAGAGGACCACCTGCGGGAGGATCAGAAAGATTTTTATGGAATGTCCTACTCCTGCCCGAGCTTTCCGATCAACCAATCCCCTAATTTCAGGGGCATCTCTTTCTTAGGTAGGGCCAGGGATCCCTAATTAGTCGAATGAGCCTATCCCTCTGGCCTATCATTGTTGGGTCGATCCGGCTGGCGGCTCCTGCATCTCCTGCGTCTCCATGGGGGCCCTTCATACAAGTTTGTTGCTAGGAGTCCCTCTAGTCGAATCTCTCATCAATAGAAGTTTACTGACTGACCTGGCTCTTCAATCGACGATCTACTGCTCCCTCTTAGTTGCAGATGCCCATGCTTTGATTCGAAAGCCCTAGCCTGAATCCCCAGTAAGATCGGAGTATGGAATTCCTCCTCCCTTCAGTCCTGTTTGAACCCGTCCCAGCAACGAAAACCCTCCTACTGCAAGGTGAGGCTCTGCCCGCCCTTCCCTTCTCCGTCAATCCACTCCGGGTCGGGTCGGAGGAGCTGCTAGTCCAACTTCTTGAGCAGCCGAGATATTGAACAACGAACATTTGATGGAATTCCTTGCCTCACCCTGAGATGAGAGGGAAGGTCGATTTGACTCGAATCCTGGACCTGATCTTTAATCCTACACCGGTTAATGATGCGATGGGAGAAGTTTCTCTTTTGTCATTTTTTCATCAATGCTGGCCCAGTCGAGGCTCGTCCATGCCCAATCCCAATGGACAAACCTTCGATCCGATCTGCCCCTAGCTCTATAATCCACCCGTCTTCCCTAGTCCCTGAAAGCCCTCCTCTCCTGGGCCTAGCCCTCTTTCTCAACTCGAGTCTGAAGTTCAGCGGCTTTCATCGTTGACGAACACCTGCGCTAATAAGACAAAGAAGTGGGGGTCTATGCCTTCCTTGAATGAATCAGTAACAACTCATTAGTGGAATGAGGGATCAAGAGACAGATAGGGTGGGAATGGCCTATCAATCATTGGTGGACCTTCCCTTTCACCGGTCACGGAGCTCTCAACTGAGTTGTTTAGGTTCTGGAATTCCATCTCTAGTTGGGGGTTTCGGTTCGAAGGTTAGAAAATGTATGTGGTGCGGGTTCATCTCTCTCGACCAGTTCAGGTGAAAGGGAAGGGTGATCGAGGGGACCCAGACGTCGAGATCTCTTCTCTATGGCGGGAGGTTTATTTCGTCTCGACGAGTGTGTTGGGGGGGCCAGAGAGGGAGTACCTATGCCTCTGAATCGATAGGATGACCATTCGTTGCAGTCGTAGGCGAAGGAGACAAGGGCGAGGCACCGAACATGTTCTATCCTCAACCTCCATCCGTCATGTGGAATCTCAATCCGCTTTTCCTATTCACTAGTACACTGCGCGCTAAAACAAAACGGGAAGCCCCTTTCTTATTATTAGGTTGATTGGTTTGGAACCCTATACAAGGGGCTGCTTGCAGCTCGCCCCTATTTCTAAGGGGGCTTATGCACTCTACTCGTTACCACTAAACGACGAAGCCAAGAAAGAGCGGAAGGAGGGACTTGAACCCTCAACCTCAGCCTTGGCAAGGCTATGCTCTACCATTAAGCTATTTCCGCCAGCTACGGTAGTGGCGAAGCACTACTGAGCAATTCACGTATCACGTCGAGACGGACGACTTATGTTTTTCCGCCGGACCACACTCGTCGACCTCCGATCGAGCTACGAGCACGAGTAGGTAGGCGGCTAGGGGGGAGGGGCGGCTGGGCTGCCTTTTCAATCAATCTCCGGCCGCCCCCTAATTACTAGACCAACCTGGTGCGAGTTGTAAGGAGTCTTGGTCTCGAGTCGAGCTGGGGCGTCATTTCATTCTCGTAACGGGAGTGAGTGCACCGCAAGACCAGACAAGTGACTCCCTCGCCTCCCAGCGGCGGTCTTTAAAGTTAAGTCATTTCCTAAGCTAAGAAAGAAAAATCCTCTTATTCTACGATAATCCAAGCAGCAGCTCCATGAGTCCGCTCGGAACCAGTCGATTCCTGAGCCATTCGTTCTCCCCTCTCGGTTGGCGTTTGCCAGCCACTAGAGCAAGTAAGAGAACAATCAGTGAATGAACAACAAGAACCCCAGATTTTGACCGGATTGTACACCTTTGTGTCTGGCTATGTATATGGATGTGCATAAAGAAGGGACGGGACATCTCTCTCCTTTTTTTTGGGGGGGGGAATCGAGAGGGAATAAGCTGCAGCGGCGCACCTCACGAACTTCTTACTGAGGCAGTACCATCCTATAGGCAGGCATTAGCGAGTGTTTGGATGCACGTGTTTTGTTCATATTCCTGCGCAGTTAAGAGAAAAATTGTCCCCAAGGCCACCGCTTGTTTCTTTCTTGGATATGCTCAGTCCGGGTATAGATGCTATGACGTGAAATCCAAGAGATGAAGATTATCCTTGAATGTTCTCTTTAATGAGGTCGCCTCATATTTTCTTTAACCTAATTAATCAGCCCCGGGGGAGAATGGTGATGGAGATGTATTGCGGCCTTCTCCTGTTCATCAACTCGAACCTCATTCTTCTGCAGTTGATGTTACGGATCAGCCCCACTCTTCAGGCCAGCAGCTTTGCTCAGCATCTTCTGCCGATTGTCAGCCTGTTCAGTTGACCTCAGAGGATTCCAGTCACCCGGCACAGCATCTTTCTTCTCGGCGGCGAAACCATTATGTTGCCCAGGCTAGGACTACTCCAGAAGATCAGCAGTCGGGACCAGTTGCTTCCCTTCCAGTCGCTTCCTCAGATTCTGGATCCCTCTCTCAGGTTCGTCGATCCTCTCGACGTTTCTTATCCCGTTGCAGAATTTTTTTCTTATTTTAGAAAGAGTTTTTCCCAAAACATCGAGCTTACCTCATGTCAGTTCAATCTTCTCATGAACCTTAATCATTTGCTTCAGCCTGAAATCATTCTTGCTGGAGAGATGCTATGCAGGAAGAAGGAAAAAAAGAATAAATAAGACTTAGTCTCATTGCCTGCAGGGAAACAAGCCATTGGCTGCAAGTAGATTTACAAGATCAAGCATAAAGCATATGGCTCGCTAGAGAGATACAAAGCTAGCTAAAGGATTCCTTCCAAAATCTTGAGTCGACCCCCTTGATAGGGGAAACATTTGCCCGCTAAAATGACCACCATTCGTGGCATTCTTGCCTTGGCTGCAATCAAAAAGTTGCCCTTATTTCAATCAACTTGACGTGAAGAATGCCTTTCAACAACATAAGGGAAGCGGGGATCCGCAAGAATCTGTTTCTATTCAGCCTCCTCCAACTCCAGGCTGATCTTCTCCTAGGAATCCTAACTTGGTATGCAAGCTCAAGAAAGCGATTTACGGATCTATATGCTTCGATTGGCTAAAGCAGGCACCAAGAGCTAAGAAGGGGGCCTGCTTGAAGAAATTTAGCTCGTTTCTCACTGCTTTATTTTGGATAAAGGGTTCCGGCTACAGTGGAACCGTGCGGATTCTGACATTTTGTTTGTCGACGTCATGGTCGTTGCCTCATCCTTCTTTTATACGTTGACGACAACATTCTCACCGGGAATGAATGAATGATTCTTCTCTTTTATTCGATTTCATCAAGGAGCTTGACAACCAATTTGTCTCTTTCATCCGCTGTATTACTTTCTCGGCATGGAGGTATCTCGCTCCACCTCTGAACTTCGCCTAACCCAAACAAAGTATACTCAAAAATGGAATTCTTATCTCGTCGAGACTGCCCTGCGCTACGCCTATATCTCCAGGTGCCAAGCTATCCGCCCCTACTCAACTAAAAAAAAGGCAGGCTGCCCTGACGACCGACACTCTACCTCGGGCTTTTGTTCTTGGTCGGAATCTCATTTCCTGGAGCGCTAAGAAGCTGCCCCTTACTCACCTCTTCAACATCTATAAAAAAGCCTTTCCCCTTTGAATAATAATAAGGTCAAGTCAAGCTTTTTGAAGCAAGCTGCTAGAAGTAGCGCTCCCGCGCTTTACTAATAACATAGAAAGTAAAGGCTCTTCTCATCGAGAGTAGGTTCTTTTCAGATACAAAAAGAAAATATCAACATTTGATACCTCTTCTGACTTTCCGTTTTCCAACAGCAATTACACATTCCCTCGGCCTCTGATTACAGTCGAAGTGCCATTGCCCATATATGAAGAACCTAGTTCTTCAATCATATCTGTACCAAATTCTTCCTTTCGGAAGAAAATATGATGCGAGGACCCGATCCACCAACTATCTGAAATGTTGGCAAACAGGGCCAACGTAGTGACCAACACTACCTTTTTCTGATCATCATGGCTTTTTTTTTTCCCTTTGCCCTTCTTTTATGGGCACTCAAAACTCAAGTGACCTTTCTTCTTGCAGGACCAACACTCTATGTTTTTCAGGTCCTTCTGCACTCACTTTGTGCTTATTCTTTTTTTTAAACATATTCTTTTGCGCAGCATTAGTCTTTTCAGACTGCTGTTCAAATCTCTTTTCAGCTTCTGCCTAAAGAAAATGGTCAGATCAATCATAGAACAAGGAGGAGTTTCACAGGAGAGAGTGGTTGTCAAAGACTCAAACGACTGAAGCGGACTTCCCGGTCACTGATCACTCTTTTGTATAGGGCATTTTGACTCTCACAGCTCAAAATTCTTTGAGAATCTTCTTCATCTTGTCTAAGTGCTGAGACACGCTCGTCCCCTCAAGCATCTTGCTTGGAAAAAACCGTTGCCGAAGAAACTTCATGTTTACCATTGTCACTGACTCATACATTCCCCTAAAGAGGTACAGGGGAGTCTCCCATCTTTCTCATGCAGACTCAATGTCTCCCACTGAAACTAGTACCTTATCCTTGACCACCATTAGCACAGCTTCGAAGAACTTTTTTTTTATTGTCTACAACTATCGATGCTGTTCATATGCTTTCTTTTGTTGTTTGGCTACAACAACATCACTTGATTGAAGAAGCCATTAGCGCCAGATCTGCGGGCTTCTCTTTTCTCAAGAATGAAAAAAAAAGATCCTGTTCTTTGAGAAGCAACTGCATTCTCATCTTCCAAACATCTACATTTAGAGGTTCCATTTTGCGATCCTTGACAATCGTATGCGTTAATGCAGTAATCATATCAGCAACTATAGATCCAGAAGATTGTATCGCTACCATATCTGCATAACCTGGACTCTCATACCAGATGATAACAATCTTTAGCTGAAAGAAAGAACAAATTTCTAGGAATGTGCAGAGCTGAGACCTGCTGTTGTTGAGTGGCAGCAAATGAGAAATATCGTTTGATTTGATTCGAAAAACGATATATAATATATATTTCTCTCAATATCAAAGTCGACGTTTGAAATATGAAAATCGAAAACTCTTTGAGATCACTCCACTCTCTCTAGACAACGGATTTCTTCGACGTGTGTATCCTACTCTCATCTCAAAACCCAACCTCAGAAAAACAGCATGCTTTCCCTTCATTTGTTTGTGCCCTGCAGATGGAGTCCTTTTAAAAGACCCAACAGATCCCCCAAGCAAGGGGCGTGTCTAACTACCTCATAGATAGCATCCACAAGACACTGAATTAGCCTAGAAATGGATGCATCCTTTTGCTATCTCTCACGACCCCCGTCACTAGAAAATTGGAAGGTCACAAACCGCCCTCTACTGTTTCAAATGTGAAACGGTGCTAAAGCAGGACCCGTGACTACGAAAAATGACTGCTCAATCAAGACTTGAGTCACCTTGGAGTAAGTCAAGCCACATACTCAACAACGTCTCTGTCTGAACTGTGGAATCGAAACACACTAGAATAACTTCAAACACTGGATCTGCAGATCTACGTGTATTCAAAAATGCAGGTCTTCTTCAATCAGGTTCTCAAACCAATCAGGGAACTTCAAAAGACCAAACGATTGAATCCCAAACTATTTCTGGCGGAACCTTCCGAGTTTTTAGAGAAAAACCACGCTGCATTTTTGCGAGATTTTGAAACTTATTGTTTCAAAGCGGCGAAAACTCTCGCGAAATTCCCACGGCGAAACCTCGAGATACTTTTCACTTGTCTTCTGCGAGTCTGAGACCTTACTTCTGCGACTACTCGACTTTTGCAAGTCCTTATCTCGACAAAATCTCCTTAAAGTCTCCTCGAGATCAGAGTCTATTCTAAAATAAAAAAAAATCCACCCAACGCCCTCTCATGGATTGAGTTACATAGTGCCACCCAGGTTTGGAACCCACTTTTTATAAGTTCATGTGCACGCATGCATGTGTCATCACCTCATTGGTCGGAGGTCCAAGGGGTCCATAGAATCCAAATATTATTCTTTTTCTTTTTCGTTTTTTTTTTAGAAGAGAGAAAGAGTCGAAACAAAGGGTACGCTCTCTAGAAGATTTGCTCGGGGCTGTTCACTTTCATTTGGTCGCCTGGTATCTTGAATGAAACCTCTTTGCTTGCGGGGGCAGGAGTGGAAACGTCTGAGAGAGCGCTTCGCGAAAGAATCGTGTGGCGCGGTGAAAGGTTTCCCGTTGGGGTTTCCGGCCCCCCTCCCCTGGTCTTCACCTAATTGTGGAAGAGGGGAGGTGAGTTGAGTATCAACTCTCTCTCTCGTGCCTTTCTTCAGCTTGTTCCTGTTCGTCTATTCGGGACGGGGCAGGCAGCCCACATACATGAAGAGAAGAAGAGAGGGGGGTTCCTTGATATTAAGGCGTCAAGGCGGTCGAAGAAGGCCACAAGTGGAAGCAACCGATGCTTTGGTCATTCAGTTGACTCCTTGCTGCCAGTCTGTGCTTGCTGTCATGCTGGCAAAAGCAGGGGTTTCGGCCGGTTTTACCTACTATTGGATTTGAACCAATGACTCTCGCCGTATGAAAGCGATACTCTAACCGCTGAGTCAAGTAGGTCAAGCTGAGTCAAGTCAGAGAAAATAGACCCCTATAAGATAAGAGAAAGCCGCGCAACCAGAGTTCCCCTTACTATACAAGGGGGGGCGGAGCGCTAAGAAAGAGAAAGCGTTATCACTATACGAAATGAAGCTGCGGCTAGCACGCTAAGATCAACCACTTGGAGAACGTGGAGCCTTTCTTTCTCGGTCGTCTGTCTTTCTCGTTGTGGATTCCGATTCATGCGGTCGTTCTCTGCTGCATTGGTGTTTTCACTCCCCACTCTCCACCATAACAAAATGTTTCCACTATATCTCAGGAGTCGTCAAAGGAAGTACGGCGGGTCCAAGTAGGAAAAAATTCACTAAGAAGTAGGGCATACAACAATGGATCAATTCATTCAACAAGATCCGTTCGGATCGGACCAGGATGAATTGGATTGGTCTGACCTCTCGCTCGGATGTCAGACTCCCGCCGCCGACAGATGTCCCATGCCACGTTTCGTGAACTGCTATGCCCGAAAATGAATGAATTGTGATATAGCGCCGAATAAGCCACAGCTCTATTCCCGACTCGAAATCTATCAAGGACTTGTTGGGAGAGAAAATAGGGAGCCCTATACCATACATCCTGCTGCCTCGGGACGACTGCACGTTACATCATAGCAGCACGACAAAATGAAGGCGGAAACCCGGTTGGGCGTTCCTGCGCACCTGGCATCCTGCAAGAAAAGGCCCCTTACTCTCGAACAAAGCAAGGGATTGAGCTGCGCGAAAGCCGTCGACTCTAATACGCCCTTATTAATTAGAGTATTATCGTCGACGGCGTAAAGGCGTTAGCGCTTTAGAAAGATTGCAGGGCGTTGAGGCTTGACTAAGAATCTCGAAAGGGCTTTTTCAGCTTACTCTGCTACAGCGGACCGTTAGGTTCGCAGGGTGCCGCGGTTTGTGGGCTTGAAGGACTTAGCGCCATGACAAGTGGTATCAGAGCCAAAGGTTCGGCCAAGCCATGGCTAGTGGGAAAAAAAAACCGTAGGCTAGTGTCGTCGAAGAGGCTCGACGGGAGCAGACTCGTAATCGTGTGGACGCCTTGTTACACAACTGAAGGGACAGATTTCGAGCGAGCGGGTTGCTTCTCCGGAGAAAGATGGGCTGGTTAG

mRNA sequence

ATGCAGAACGGATTTCATAACCACCATCCATCACCAATCACATTCCACATCCCACTTCAAACTTTTCGATTCCTCGGGGGGACTCCTCTATTCTATTTCGAGAAAGGCATTCCAGCTTCAAAGGCAGGTGAGCCGGGGCGGGCTTTCAAGACAGAGATGCACTACTCCATCTGGAAAGAGCTTTCCCTCGTGGAGAAAGAGAAGAACACCTTATTTAAAGGACAGGTCAGGGGCAGGGAGAAGGGCTTCTTCTGCTTTACAACCGGAATAAGGAACCTTAGAATGAACCCTACCTGTCGATCAAAAAATGGGATTGGAGAGGACCACCTGCGGGAGGATCAGAAAGATTTTTATGGAATGTCCTACTCCTGCCCGAGCTTTCCGATCAACCAATCCCCTAATTTCAGGGGCATCTCTTTCTTAGGTTCTGGAATTCCATCTCTAGTTGGGGGTTTCGGTTCGAAGGTTAGAAAATGTATGTGGTGCGGGTTCATCTCTCTCGACCAGTTCAGGGGCTGCTTGCAGCTCGCCCCTATTTCTAAGGGGGCTTATGCACTCTACTCGTTACCACTAAACGACGAAGCCAAGAAAGAGCGGAAGGAGGGACTTGAACCCTCAACCTCAGCCTTGGCAAGGCTATGCTCTACCATTAAGCTATTTCCGCCAGCTACGTTAAGAGAAAAATTGTCCCCAAGGCCACCGCTTGTTTCTTTCTTGGATATGCTCAGTCCGGCCCCGGGGGAGAATGGTGATGGAGATGTATTGCGGCCTTCTCCTGTTCATCAACTCGAACCTCATTCTTCTGCAGTTGATGTTACGGATCAGCCCCACTCTTCAGGCCAGCAGCTTTGCTCAGCATCTTCTGCCGATTGTCAGCCTGTTCAGTTGACCTCAGAGGATTCCAGTCACCCGGCACAGCATCTTTCTTCTCGGCGGCGAAACCATTATGTTGCCCAGGCTAGGACTACTCCAGAAGATCAGCAGTCGGGACCAGTTGCTTCCCTTCCAGTCGCTTCCTCAGATTCTGGATCCCTCTCTCAGGAGTGGAAACGTCTGAGAGAGCGCTTCGCGAAAGAATCGTGTGGCGCGGTGAAAGGTTTCCCGTTGGGGTTTCCGGCCCCCCTCCCCTGGTCTTCACCTAATTGTGGAAGAGGGGAGGCAGCCCACATACATGAAGAGAAGAAGAGAGGGGGGTTCCTTGATATTAAGGCGTCAAGGCGGTCGAAGAAGGCCACAAGTGGAAGCAACCGATGCTTTGGTCATTCAGTTGACTCCTTGCTGCCAGTCTGTGCTTGCTGTCATGCTGGCAAAAGCAGGGGTTTCGGCCGCTTACTCTGCTACAGCGGACCGTTAGGTTCGCAGGGTGCCGCGGTTTGTGGGCTTGAAGGACTTAGCGCCATGACAAGTGGTATCAGAGCCAAAGGTTCGGCCAAGCCATGGCTAGTGGGAAAAAAAAACCGTAGGCTAGTGTCGTCGAAGAGGCTCGACGGGAGCAGACTCGTAATCGTGTGGACGCCTTGTTACACAACTGAAGGGACAGATTTCGAGCGAGCGGGTTGCTTCTCCGGAGAAAGATGGGCTGGTTAG

Coding sequence (CDS)

ATGCAGAACGGATTTCATAACCACCATCCATCACCAATCACATTCCACATCCCACTTCAAACTTTTCGATTCCTCGGGGGGACTCCTCTATTCTATTTCGAGAAAGGCATTCCAGCTTCAAAGGCAGGTGAGCCGGGGCGGGCTTTCAAGACAGAGATGCACTACTCCATCTGGAAAGAGCTTTCCCTCGTGGAGAAAGAGAAGAACACCTTATTTAAAGGACAGGTCAGGGGCAGGGAGAAGGGCTTCTTCTGCTTTACAACCGGAATAAGGAACCTTAGAATGAACCCTACCTGTCGATCAAAAAATGGGATTGGAGAGGACCACCTGCGGGAGGATCAGAAAGATTTTTATGGAATGTCCTACTCCTGCCCGAGCTTTCCGATCAACCAATCCCCTAATTTCAGGGGCATCTCTTTCTTAGGTTCTGGAATTCCATCTCTAGTTGGGGGTTTCGGTTCGAAGGTTAGAAAATGTATGTGGTGCGGGTTCATCTCTCTCGACCAGTTCAGGGGCTGCTTGCAGCTCGCCCCTATTTCTAAGGGGGCTTATGCACTCTACTCGTTACCACTAAACGACGAAGCCAAGAAAGAGCGGAAGGAGGGACTTGAACCCTCAACCTCAGCCTTGGCAAGGCTATGCTCTACCATTAAGCTATTTCCGCCAGCTACGTTAAGAGAAAAATTGTCCCCAAGGCCACCGCTTGTTTCTTTCTTGGATATGCTCAGTCCGGCCCCGGGGGAGAATGGTGATGGAGATGTATTGCGGCCTTCTCCTGTTCATCAACTCGAACCTCATTCTTCTGCAGTTGATGTTACGGATCAGCCCCACTCTTCAGGCCAGCAGCTTTGCTCAGCATCTTCTGCCGATTGTCAGCCTGTTCAGTTGACCTCAGAGGATTCCAGTCACCCGGCACAGCATCTTTCTTCTCGGCGGCGAAACCATTATGTTGCCCAGGCTAGGACTACTCCAGAAGATCAGCAGTCGGGACCAGTTGCTTCCCTTCCAGTCGCTTCCTCAGATTCTGGATCCCTCTCTCAGGAGTGGAAACGTCTGAGAGAGCGCTTCGCGAAAGAATCGTGTGGCGCGGTGAAAGGTTTCCCGTTGGGGTTTCCGGCCCCCCTCCCCTGGTCTTCACCTAATTGTGGAAGAGGGGAGGCAGCCCACATACATGAAGAGAAGAAGAGAGGGGGGTTCCTTGATATTAAGGCGTCAAGGCGGTCGAAGAAGGCCACAAGTGGAAGCAACCGATGCTTTGGTCATTCAGTTGACTCCTTGCTGCCAGTCTGTGCTTGCTGTCATGCTGGCAAAAGCAGGGGTTTCGGCCGCTTACTCTGCTACAGCGGACCGTTAGGTTCGCAGGGTGCCGCGGTTTGTGGGCTTGAAGGACTTAGCGCCATGACAAGTGGTATCAGAGCCAAAGGTTCGGCCAAGCCATGGCTAGTGGGAAAAAAAAACCGTAGGCTAGTGTCGTCGAAGAGGCTCGACGGGAGCAGACTCGTAATCGTGTGGACGCCTTGTTACACAACTGAAGGGACAGATTTCGAGCGAGCGGGTTGCTTCTCCGGAGAAAGATGGGCTGGTTAG

Protein sequence

MQNGFHNHHPSPITFHIPLQTFRFLGGTPLFYFEKGIPASKAGEPGRAFKTEMHYSIWKELSLVEKEKNTLFKGQVRGREKGFFCFTTGIRNLRMNPTCRSKNGIGEDHLREDQKDFYGMSYSCPSFPINQSPNFRGISFLGSGIPSLVGGFGSKVRKCMWCGFISLDQFRGCLQLAPISKGAYALYSLPLNDEAKKERKEGLEPSTSALARLCSTIKLFPPATLREKLSPRPPLVSFLDMLSPAPGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSGQQLCSASSADCQPVQLTSEDSSHPAQHLSSRRRNHYVAQARTTPEDQQSGPVASLPVASSDSGSLSQEWKRLRERFAKESCGAVKGFPLGFPAPLPWSSPNCGRGEAAHIHEEKKRGGFLDIKASRRSKKATSGSNRCFGHSVDSLLPVCACCHAGKSRGFGRLLCYSGPLGSQGAAVCGLEGLSAMTSGIRAKGSAKPWLVGKKNRRLVSSKRLDGSRLVIVWTPCYTTEGTDFERAGCFSGERWAG
Homology
[Close]
BLAST of Moc09g15860 vs. NCBI nr
Match: GFY90575.1 (hypothetical protein Acr_07g0007720 [Actinidia rufa])

HSP 1 Score: 194.1 bits (492), Expect = 3.0e-45
Identity = 117/192 (60.94%), Postives = 127/192 (66.15%), Query Frame = 0 

Query: 182 GAYALYSLPLNDEAKKERKEGLEP---------------------------------STS 241
           GAYAL+SLPLNDEA+  R++ L P                                 S+S
Sbjct: 296 GAYALHSLPLNDEARSGRRD-LNPQPQPWQGYALPLSYFRQLRDGTSLSFGGKREGRSSS 355

Query: 242 ALARL-----------CSTIKLFPPATLREKLSPRPPLVSFLDMLSP-APGENGDGDVLR 301
             +R            C    +  PA LREKLSPR PL+SFLDMLSP APGENGDGDVLR
Sbjct: 356 GTSRTSYWGSTIGICECLDALVHIPAQLREKLSPRQPLLSFLDMLSPEAPGENGDGDVLR 415

Query: 302 PSPVHQLEPHSSAVDVTDQPHSSGQQLCSASSADCQPVQLTSEDSSHPAQHLSSRRRNHY 329
           PSPVHQLEPHSSAVDVTDQPHSSGQQLCSASSADCQPVQLTSEDSSHPAQHLSSRRR   
Sbjct: 416 PSPVHQLEPHSSAVDVTDQPHSSGQQLCSASSADCQPVQLTSEDSSHPAQHLSSRRRLQS 475

[Close]
BLAST of Moc09g15860 vs. NCBI nr
Match: GFY81748.1 (hypothetical protein Acr_01g0015560 [Actinidia rufa])

HSP 1 Score: 186.0 bits (471), Expect = 8.2e-43
Identity = 97/108 (89.81%), Postives = 100/108 (92.59%), Query Frame = 0 

Query: 222 PATLREKLSPRPPLVSFLDMLSP-APGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSG 281
           PA LREKLSPR PL+SFLDMLSP APGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSG
Sbjct: 80  PAQLREKLSPRQPLLSFLDMLSPEAPGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSG 139

Query: 282 QQLCSASSADCQPVQLTSEDSSHPAQHLSSRRRNHYVAQARTTPEDQQ 329
           QQLCSASSADCQPVQLTSEDSSHPAQHLSSRRR   V+Q +TTPED Q
Sbjct: 140 QQLCSASSADCQPVQLTSEDSSHPAQHLSSRRRLQSVSQGQTTPEDPQ 187

[Close]
BLAST of Moc09g15860 vs. NCBI nr
Match: GFS28528.1 (hypothetical protein Acr_00g0002340 [Actinidia rufa] >GFY81749.1 hypothetical protein Acr_01g0015570 [Actinidia rufa] >GFY90568.1 hypothetical protein Acr_07g0007650 [Actinidia rufa])

HSP 1 Score: 186.0 bits (471), Expect = 8.2e-43
Identity = 97/108 (89.81%), Postives = 100/108 (92.59%), Query Frame = 0 

Query: 222 PATLREKLSPRPPLVSFLDMLSP-APGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSG 281
           PA LREKLSPR PL+SFLDMLSP APGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSG
Sbjct: 79  PAQLREKLSPRQPLLSFLDMLSPEAPGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSG 138

Query: 282 QQLCSASSADCQPVQLTSEDSSHPAQHLSSRRRNHYVAQARTTPEDQQ 329
           QQLCSASSADCQPVQLTSEDSSHPAQHLSSRRR   V+Q +TTPED Q
Sbjct: 139 QQLCSASSADCQPVQLTSEDSSHPAQHLSSRRRLQSVSQGQTTPEDPQ 186

[Close]
BLAST of Moc09g15860 vs. NCBI nr
Match: PPS06319.1 (hypothetical protein GOBAR_AA14324 [Gossypium barbadense])

HSP 1 Score: 153.7 bits (387), Expect = 4.5e-33
Identity = 81/114 (71.05%), Postives = 87/114 (76.32%), Query Frame = 0 

Query: 234 PLVSFLDMLSPAPGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSGQQLCSASSADCQP 293
           PL   L      P ENGDGDV RPSPVHQLEPHSS VDVTDQPHSSGQQ C A  ADCQ 
Sbjct: 171 PLGWHLPATKANPCENGDGDVFRPSPVHQLEPHSSTVDVTDQPHSSGQQPCPACFADCQS 230

Query: 294 VQLTSEDSSHPAQHLSSRRRNHYVAQARTTPEDQQSGPVASLPVASSDSGSLSQ 348
           +QLTSEDS+HPAQH  S R+ HYV+Q + TPEDQQ  PV+ LP ASSDSGSLSQ
Sbjct: 231 IQLTSEDSNHPAQHTYSWRQLHYVSQGKITPEDQQFSPVSFLPTASSDSGSLSQ 284

[Close]
BLAST of Moc09g15860 vs. NCBI nr
Match: YP_009045815.1 (orf221 [Batis maritima] >AIC83418.1 orf221 [Batis maritima])

HSP 1 Score: 145.2 bits (365), Expect = 1.6e-30
Identity = 83/111 (74.77%), Postives = 90/111 (81.08%), Query Frame = 0 

Query: 238 FLDMLS-PAPGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSGQQLCSASSADCQPVQL 297
           FL++++ P    NGDGDVLRPSPVH    HSSAVDVTDQPHSSGQQ C ASSADCQPVQL
Sbjct: 11  FLNLINKPRERMNGDGDVLRPSPVHH---HSSAVDVTDQPHSSGQQPCPASSADCQPVQL 70

Query: 298 TSEDSSHPAQHLSSRRRNHYVAQARTTPEDQQSGPVASLPVASSDSGSLSQ 348
           TSEDSSHPAQH+SSRRR H V+Q +TTPEDQQS      PVASSDS SLSQ
Sbjct: 71  TSEDSSHPAQHVSSRRRLHSVSQGKTTPEDQQSS-----PVASSDSVSLSQ 113

[Close]
BLAST of Moc09g15860 vs. ExPASy TrEMBL
Match: A0A2N9GIJ9 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26896 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.1e-58
Identity = 169/352 (48.01%), Postives = 198/352 (56.25%), Query Frame = 0 

Query: 8   HHPSPITFHIPLQTFRFLGGTPLFYFEKGIPASKAGEPGRAFKTEMHYSIWKELSLVEKE 67
           HH S  T H  L    F     L Y  KGIPAS+A   GRAFKTEMHYSIWK LSLV KE
Sbjct: 99  HHQSHSTSHFKL----FDSSGSLLY--KGIPASEA---GRAFKTEMHYSIWKGLSLVGKE 158

Query: 68  KNTLFKGQVR----GREKGFFCFTTGIRNLRMNPTCRSKNGIGEDHLREDQKDF--YGMS 127
           KN LFK + R      +K  F     ++ L  +  C   +    D  R  ++D       
Sbjct: 159 KNPLFKVEARPCPIPMDKPTFDPPLSLKGLMHSTRCLLHSLPLNDEARSGRRDLNPQPQP 218

Query: 128 YSCPSFPINQSPNFRGISFLGSGIPSLVGGFGSKVRKCMWCGFISLDQFRGCLQLAPISK 187
           +   + P++     R +  L + I +      S+V   +   FI +         AP  +
Sbjct: 219 WQGYALPLSYFRQLRNLRPLSAAIGASCKESWSRVE--LGRHFILVTGVS-----APQDQ 278

Query: 188 GAYALYSLPLNDEAKKERKEGLEPSTSALARLC------STIKLFPPATLREKLSPRPPL 247
            +Y+L S         +R+      +  L RL       S+    PP T R       PL
Sbjct: 279 TSYSLAS---------QRRHLSFKLSHFLRRLLLFYDNPSSSSTSPPGTSRFLSHSFSPL 338

Query: 248 VSFLDMLSPAPGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSGQQLCSASSADCQPVQ 307
              L      PGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSGQQLC ASSADCQPVQ
Sbjct: 339 GWRLPATRATPGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSGQQLCPASSADCQPVQ 398

Query: 308 LTSEDSSHPAQHLSSRRRNHYVAQARTTPEDQQSGPVASLPVASSDSGSLSQ 348
           LTSEDSSHPAQH+ SRRR HYV+QA+TTPEDQQS PVASLPVASSDSGSLSQ
Sbjct: 399 LTSEDSSHPAQHVYSRRRLHYVSQAKTTPEDQQSSPVASLPVASSDSGSLSQ 425

[Close]
BLAST of Moc09g15860 vs. ExPASy TrEMBL
Match: A0A7J0EVU5 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_07g0007720 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.5e-45
Identity = 117/192 (60.94%), Postives = 127/192 (66.15%), Query Frame = 0 

Query: 182 GAYALYSLPLNDEAKKERKEGLEP---------------------------------STS 241
           GAYAL+SLPLNDEA+  R++ L P                                 S+S
Sbjct: 296 GAYALHSLPLNDEARSGRRD-LNPQPQPWQGYALPLSYFRQLRDGTSLSFGGKREGRSSS 355

Query: 242 ALARL-----------CSTIKLFPPATLREKLSPRPPLVSFLDMLSP-APGENGDGDVLR 301
             +R            C    +  PA LREKLSPR PL+SFLDMLSP APGENGDGDVLR
Sbjct: 356 GTSRTSYWGSTIGICECLDALVHIPAQLREKLSPRQPLLSFLDMLSPEAPGENGDGDVLR 415

Query: 302 PSPVHQLEPHSSAVDVTDQPHSSGQQLCSASSADCQPVQLTSEDSSHPAQHLSSRRRNHY 329
           PSPVHQLEPHSSAVDVTDQPHSSGQQLCSASSADCQPVQLTSEDSSHPAQHLSSRRR   
Sbjct: 416 PSPVHQLEPHSSAVDVTDQPHSSGQQLCSASSADCQPVQLTSEDSSHPAQHLSSRRRLQS 475

[Close]
BLAST of Moc09g15860 vs. ExPASy TrEMBL
Match: A0A2N9FRH9 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21209 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.8e-43
Identity = 95/102 (93.14%), Postives = 98/102 (96.08%), Query Frame = 0 

Query: 246 PGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSGQQLCSASSADCQPVQLTSEDSSHPA 305
           PGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSGQQLC ASSADCQPVQLTSEDSSHPA
Sbjct: 56  PGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSGQQLCPASSADCQPVQLTSEDSSHPA 115

Query: 306 QHLSSRRRNHYVAQARTTPEDQQSGPVASLPVASSDSGSLSQ 348
           QH+ SRRR HYV+QA+TTPEDQQS PVASLPVASSDSGSLSQ
Sbjct: 116 QHVYSRRRLHYVSQAKTTPEDQQSSPVASLPVASSDSGSLSQ 157

[Close]
BLAST of Moc09g15860 vs. ExPASy TrEMBL
Match: A0A7J0E729 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_00g0002340 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.9e-43
Identity = 97/108 (89.81%), Postives = 100/108 (92.59%), Query Frame = 0 

Query: 222 PATLREKLSPRPPLVSFLDMLSP-APGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSG 281
           PA LREKLSPR PL+SFLDMLSP APGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSG
Sbjct: 79  PAQLREKLSPRQPLLSFLDMLSPEAPGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSG 138

Query: 282 QQLCSASSADCQPVQLTSEDSSHPAQHLSSRRRNHYVAQARTTPEDQQ 329
           QQLCSASSADCQPVQLTSEDSSHPAQHLSSRRR   V+Q +TTPED Q
Sbjct: 139 QQLCSASSADCQPVQLTSEDSSHPAQHLSSRRRLQSVSQGQTTPEDPQ 186

[Close]
BLAST of Moc09g15860 vs. ExPASy TrEMBL
Match: A0A7J0E5P9 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_01g0015560 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.9e-43
Identity = 97/108 (89.81%), Postives = 100/108 (92.59%), Query Frame = 0 

Query: 222 PATLREKLSPRPPLVSFLDMLSP-APGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSG 281
           PA LREKLSPR PL+SFLDMLSP APGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSG
Sbjct: 80  PAQLREKLSPRQPLLSFLDMLSPEAPGENGDGDVLRPSPVHQLEPHSSAVDVTDQPHSSG 139

Query: 282 QQLCSASSADCQPVQLTSEDSSHPAQHLSSRRRNHYVAQARTTPEDQQ 329
           QQLCSASSADCQPVQLTSEDSSHPAQHLSSRRR   V+Q +TTPED Q
Sbjct: 140 QQLCSASSADCQPVQLTSEDSSHPAQHLSSRRRLQSVSQGQTTPEDPQ 187

The following BLAST results are available for this feature:
BLAST of Moc09g15860 vs. NCBI nr
Match NameE-valueIdentityDescription
GFY90575.13.0e-4560.94hypothetical protein Acr_07g0007720 [Actinidia rufa][more]
GFY81748.18.2e-4389.81hypothetical protein Acr_01g0015560 [Actinidia rufa][more]
GFS28528.18.2e-4389.81hypothetical protein Acr_00g0002340 [Actinidia rufa] >GFY81749.1 hypothetical pr... [more]
PPS06319.14.5e-3371.05hypothetical protein GOBAR_AA14324 [Gossypium barbadense][more]
YP_009045815.11.6e-3074.77orf221 [Batis maritima] >AIC83418.1 orf221 [Batis maritima][more]
BLAST of Moc09g15860 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc09g15860 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2N9GIJ91.1e-5848.01Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic... [more]
A0A7J0EVU51.5e-4560.94Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_07g0007720 PE=4 SV=1[more]
A0A2N9FRH91.8e-4393.14Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic... [more]
A0A7J0E7293.9e-4389.81Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_00g0002340 PE=4 SV=1[more]
A0A7J0E5P93.9e-4389.81Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_01g0015560 PE=4 SV=1[more]
BLAST of Moc09g15860 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..286
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 321..344
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..286

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g15860.1Moc09g15860.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
biological_process GO:0050896 response to stimulus
biological_process GO:0006099 tricarboxylic acid cycle
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0045281 succinate dehydrogenase complex
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0000104 succinate dehydrogenase activity