Moc09g15810 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g15810
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Dimer_Tnp_hAT domain-containing protein
Location	chr9: 13120879 .. 13121436 (-)
RNA-Seq Expression	Moc09g15810
Synteny	Moc09g15810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGAGAGAAAGAGTTAGACTTCTATATTGCGTTGCGAAGAGAGATCGAAGACGAAGATTTTCTGACGCAGTGTGGGCACTGGATGGAAAAGACAGAGAAGAGAACAACCCACCGGAAGGGCATACCTCAGGAGCACCCCCGGGAAACATCGAGATGCACGAAGCCGACCTATATCTCGAATCGAAAGAAAAATGCAGGAAAGGAAAATTAAATATGAAAGAAAAAAGATGCTTTGGGAGTGTGAGATACGCGGACGGGGAGTACGCAGCCGAACAACCGCAGGAGCTTCCAGCAGTGATAGCTGCCCCCACCAGATGGGCCGCCCAAAACCTGGAGCTAACATTTCAATCGGAAATCCACGTCGGATCGCGGCGAGACGAAAAAGGCAGACTGAAGCGGAGGATCACAAAATGCAACACAACAAGGGGCAAACCAAGCGCTTGCGCGAAAGAAGAAGCGAATCAATCAGAATGGAGACATGGAGAAGAGGCGAAAGAGAGATTTTCGAGCCTGCAAGCTGCAAGCAACAACGGCGGAAAAGCCGTTGCGCGCTAG

mRNA sequence

ATGCCGAGAGAAAGAGTTAGACTTCTATATTGCGTTGCGAAGAGAGATCGAAGACGAAGATTTTCTGACGCAGTGTGGGCACTGGATGGAAAAGACAGAGAAGAGAACAACCCACCGGAAGGGCATACCTCAGGAGCACCCCCGGGAAACATCGAGATGCACGAAGCCGACCTATATCTCGAATCGAAAGAAAAATGCAGGAAAGGAAAATTAAATATGAAAGAAAAAAGATGCTTTGGGAGTGTGAGATACGCGGACGGGGAGTACGCAGCCGAACAACCGCAGGAGCTTCCAGCAGTGATAGCTGCCCCCACCAGATGGGCCGCCCAAAACCTGGAGCTAACATTTCAATCGGAAATCCACGTCGGATCGCGGCGAGACGAAAAAGGCAGACTGAAGCGGAGGATCACAAAATGCAACACAACAAGGGGCAAACCAAGCGCTTGCGCGAAAGAAGAAGCGAATCAATCAGAATGGAGACATGGAGAAGAGGCGAAAGAGAGATTTTCGAGCCTGCAAGCTGCAAGCAACAACGGCGGAAAAGCCGTTGCGCGCTAG

Coding sequence (CDS)

ATGCCGAGAGAAAGAGTTAGACTTCTATATTGCGTTGCGAAGAGAGATCGAAGACGAAGATTTTCTGACGCAGTGTGGGCACTGGATGGAAAAGACAGAGAAGAGAACAACCCACCGGAAGGGCATACCTCAGGAGCACCCCCGGGAAACATCGAGATGCACGAAGCCGACCTATATCTCGAATCGAAAGAAAAATGCAGGAAAGGAAAATTAAATATGAAAGAAAAAAGATGCTTTGGGAGTGTGAGATACGCGGACGGGGAGTACGCAGCCGAACAACCGCAGGAGCTTCCAGCAGTGATAGCTGCCCCCACCAGATGGGCCGCCCAAAACCTGGAGCTAACATTTCAATCGGAAATCCACGTCGGATCGCGGCGAGACGAAAAAGGCAGACTGAAGCGGAGGATCACAAAATGCAACACAACAAGGGGCAAACCAAGCGCTTGCGCGAAAGAAGAAGCGAATCAATCAGAATGGAGACATGGAGAAGAGGCGAAAGAGAGATTTTCGAGCCTGCAAGCTGCAAGCAACAACGGCGGAAAAGCCGTTGCGCGCTAG

Protein sequence

MPRERVRLLYCVAKRDRRRRFSDAVWALDGKDREENNPPEGHTSGAPPGNIEMHEADLYLESKEKCRKGKLNMKEKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQAASNNGGKAVAR

Homology

[Close]

BLAST of Moc09g15810 vs. NCBI nr
Match: YP_009941458.1 (hypothetical protein [Fagus sylvatica] >QOC70516.1 hypothetical protein [Fagus sylvatica] >QVG61319.1 hypothetical protein [Fagus sylvatica] >QVG61375.1 hypothetical protein [Fagus sylvatica])

HSP 1 Score: 205.3 bits (521), Expect = 4.6e-49
Identity = 111/141 (78.72%), Postives = 119/141 (84.40%), Query Frame = 0


Query: 39  PEGHTSGAPPGNIEMHEADLYLESKEKCRKGKLNMKEKRCFGSVRYADGEYAAEQPQELP 98
           P+ H S  PP NI +HEADL++E K + RK K  +K KRCFGSVRYADGEYAAEQPQ LP
Sbjct: 15  PQEHQS--PPANIYLHEADLWIERKMQERKMKYEIK-KRCFGSVRYADGEYAAEQPQGLP 74

Query: 99  AVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSE 158
           AVIA  TRW AQNLELTFQSEI+VGSR  EK RLKRRITKCNTTRG+PSACAKEEANQSE
Sbjct: 75  AVIAELTRWVAQNLELTFQSEINVGSRLSEKHRLKRRITKCNTTRGEPSACAKEEANQSE 134

Query: 159 WRHGEEAKERFSSLQAASNNG 180
           WR G EAKERFSSLQAASNNG
Sbjct: 135 WRQGGEAKERFSSLQAASNNG 152

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BLAST of Moc09g15810 vs. NCBI nr
Match: KAC9566655.1 (hypothetical protein E3N88_45625 [Mikania micrantha])

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-25
Identity = 65/85 (76.47%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 83  RYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTT 142
           R ADGEYAAEQPQ LPAVIA  TRWAAQNLELT +SEI+VG R  E+GRLKRR  KCNTT
Sbjct: 69  RVADGEYAAEQPQGLPAVIAELTRWAAQNLELTLKSEINVGPRLSEEGRLKRRSRKCNTT 128

Query: 143 RGKPSACAKEEANQSEWRHGEEAKE 168
           RG+P ACAKEEANQSEWR G E ++
Sbjct: 129 RGEPKACAKEEANQSEWRQGGEKRK 153

[Close]

BLAST of Moc09g15810 vs. NCBI nr
Match: CAB4076424.1 (unnamed protein product [Lactuca saligna])

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-25
Identity = 66/93 (70.97%), Postives = 73/93 (78.49%), Query Frame = 0


Query: 75  EKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKR 134
           E    G  + ADGEYAAEQPQ LPAVIA  TRWAAQNLELT +SEI+VG R  E+GRLKR
Sbjct: 23  ENASAGIKQKADGEYAAEQPQGLPAVIAELTRWAAQNLELTLKSEINVGPRLSEEGRLKR 82

Query: 135 RITKCNTTRGKPSACAKEEANQSEWRHGEEAKE 168
           R  KCNTTRG+P ACAKEEANQSEWR G E ++
Sbjct: 83  RSRKCNTTRGEPKACAKEEANQSEWRQGGEKRK 115

[Close]

BLAST of Moc09g15810 vs. NCBI nr
Match: GEW53690.1 (NADH dehydrogenase subunit 2, mitochondrial [Tanacetum cinerariifolium])

HSP 1 Score: 119.4 bits (298), Expect = 3.3e-23
Identity = 62/83 (74.70%), Postives = 68/83 (81.93%), Query Frame = 0


Query: 85  ADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRG 144
           ADGEYAAEQ Q LPAVIA  TRWAAQNLELT +SEI+V  R  E+GRLKRR  KCNTTRG
Sbjct: 78  ADGEYAAEQSQGLPAVIAELTRWAAQNLELTLKSEINVKPRLSEEGRLKRRSRKCNTTRG 137

Query: 145 KPSACAKEEANQSEWRHGEEAKE 168
           +P ACAKEEANQSEWR G E ++
Sbjct: 138 EPKACAKEEANQSEWRQGGEKRK 160

[Close]

BLAST of Moc09g15810 vs. NCBI nr
Match: GEY23800.1 (hypothetical protein AMTR_s05569p00002680, partial [Tanacetum cinerariifolium] >GEY23812.1 hypothetical protein AMTR_s05569p00002680, partial [Tanacetum cinerariifolium])

HSP 1 Score: 119.0 bits (297), Expect = 4.3e-23
Identity = 65/97 (67.01%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 78  CFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRIT 137
           C   +  ADGEYAAEQPQ LPAVIA  TRWAAQNLE+T +SEI+VG    E+GRLKRR  
Sbjct: 11  CDVVIMKADGEYAAEQPQGLPAVIAKLTRWAAQNLEMTLKSEINVGPWLSEEGRLKRRSR 70

Query: 138 KCNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQA 175
           KCNTTRG+P ACAKEEANQSEWR  +EA  +  +L A
Sbjct: 71  KCNTTRGEPKACAKEEANQSEWR--QEAAPQGENLLA 105

[Close]

BLAST of Moc09g15810 vs. ExPASy TrEMBL
Match: A0A7L7T4J0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=ORF1 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.2e-49
Identity = 111/141 (78.72%), Postives = 119/141 (84.40%), Query Frame = 0


Query: 39  PEGHTSGAPPGNIEMHEADLYLESKEKCRKGKLNMKEKRCFGSVRYADGEYAAEQPQELP 98
           P+ H S  PP NI +HEADL++E K + RK K  +K KRCFGSVRYADGEYAAEQPQ LP
Sbjct: 15  PQEHQS--PPANIYLHEADLWIERKMQERKMKYEIK-KRCFGSVRYADGEYAAEQPQGLP 74

Query: 99  AVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSE 158
           AVIA  TRW AQNLELTFQSEI+VGSR  EK RLKRRITKCNTTRG+PSACAKEEANQSE
Sbjct: 75  AVIAELTRWVAQNLELTFQSEINVGSRLSEKHRLKRRITKCNTTRGEPSACAKEEANQSE 134

Query: 159 WRHGEEAKERFSSLQAASNNG 180
           WR G EAKERFSSLQAASNNG
Sbjct: 135 WRQGGEAKERFSSLQAASNNG 152

[Close]

BLAST of Moc09g15810 vs. ExPASy TrEMBL
Match: A0A2N9GHD9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26884 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.2e-49
Identity = 111/141 (78.72%), Postives = 119/141 (84.40%), Query Frame = 0


Query: 39  PEGHTSGAPPGNIEMHEADLYLESKEKCRKGKLNMKEKRCFGSVRYADGEYAAEQPQELP 98
           P+ H S  PP NI +HEADL++E K + RK K  +K KRCFGSVRYADGEYAAEQPQ LP
Sbjct: 439 PQEHQS--PPANIYLHEADLWIERKMQERKMKYEIK-KRCFGSVRYADGEYAAEQPQGLP 498

Query: 99  AVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSE 158
           AVIA  TRW AQNLELTFQSEI+VGSR  EK RLKRRITKCNTTRG+PSACAKEEANQSE
Sbjct: 499 AVIAELTRWVAQNLELTFQSEINVGSRLSEKHRLKRRITKCNTTRGEPSACAKEEANQSE 558

Query: 159 WRHGEEAKERFSSLQAASNNG 180
           WR G EAKERFSSLQAASNNG
Sbjct: 559 WRQGGEAKERFSSLQAASNNG 576

[Close]

BLAST of Moc09g15810 vs. ExPASy TrEMBL
Match: A0A2N9FGL4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13901 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.2e-49
Identity = 111/141 (78.72%), Postives = 119/141 (84.40%), Query Frame = 0


Query: 39  PEGHTSGAPPGNIEMHEADLYLESKEKCRKGKLNMKEKRCFGSVRYADGEYAAEQPQELP 98
           P+ H S  PP NI +HEADL++E K + RK K  +K KRCFGSVRYADGEYAAEQPQ LP
Sbjct: 282 PQEHQS--PPANIYLHEADLWIERKMQERKMKYEIK-KRCFGSVRYADGEYAAEQPQGLP 341

Query: 99  AVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSE 158
           AVIA  TRW AQNLELTFQSEI+VGSR  EK RLKRRITKCNTTRG+PSACAKEEANQSE
Sbjct: 342 AVIAELTRWVAQNLELTFQSEINVGSRLSEKHRLKRRITKCNTTRGEPSACAKEEANQSE 401

Query: 159 WRHGEEAKERFSSLQAASNNG 180
           WR G EAKERFSSLQAASNNG
Sbjct: 402 WRQGGEAKERFSSLQAASNNG 419

[Close]

BLAST of Moc09g15810 vs. ExPASy TrEMBL
Match: A0A5N6L8L8 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_45625 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 7.6e-26
Identity = 65/85 (76.47%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 83  RYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTT 142
           R ADGEYAAEQPQ LPAVIA  TRWAAQNLELT +SEI+VG R  E+GRLKRR  KCNTT
Sbjct: 69  RVADGEYAAEQPQGLPAVIAELTRWAAQNLELTLKSEINVGPRLSEEGRLKRRSRKCNTT 128

Query: 143 RGKPSACAKEEANQSEWRHGEEAKE 168
           RG+P ACAKEEANQSEWR G E ++
Sbjct: 129 RGEPKACAKEEANQSEWRQGGEKRK 153

[Close]

BLAST of Moc09g15810 vs. ExPASy TrEMBL
Match: A0A6S7LAR3 (Uncharacterized protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS5158 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.3e-25
Identity = 66/93 (70.97%), Postives = 73/93 (78.49%), Query Frame = 0


Query: 75  EKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKR 134
           E    G  + ADGEYAAEQPQ LPAVIA  TRWAAQNLELT +SEI+VG R  E+GRLKR
Sbjct: 23  ENASAGIKQKADGEYAAEQPQGLPAVIAELTRWAAQNLELTLKSEINVGPRLSEEGRLKR 82

Query: 135 RITKCNTTRGKPSACAKEEANQSEWRHGEEAKE 168
           R  KCNTTRG+P ACAKEEANQSEWR G E ++
Sbjct: 83  RSRKCNTTRGEPKACAKEEANQSEWRQGGEKRK 115

The following BLAST results are available for this feature:

BLAST of Moc09g15810 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009941458.1	4.6e-49	78.72	hypothetical protein [Fagus sylvatica] >QOC70516.1 hypothetical protein [Fagus s...	[more]
KAC9566655.1	1.6e-25	76.47	hypothetical protein E3N88_45625 [Mikania micrantha]	[more]
CAB4076424.1	2.7e-25	70.97	unnamed protein product [Lactuca saligna]	[more]
GEW53690.1	3.3e-23	74.70	NADH dehydrogenase subunit 2, mitochondrial [Tanacetum cinerariifolium]	[more]
GEY23800.1	4.3e-23	67.01	hypothetical protein AMTR_s05569p00002680, partial [Tanacetum cinerariifolium] >...	[more]

BLAST of Moc09g15810 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc09g15810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7L7T4J0	2.2e-49	78.72	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=ORF1 PE=4 SV=1	[more]
A0A2N9GHD9	2.2e-49	78.72	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26884 PE=4 SV=1	[more]
A0A2N9FGL4	2.2e-49	78.72	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13901 PE=4 SV=1	[more]
A0A5N6L8L8	7.6e-26	76.47	Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_45625 PE=4 SV=1	[more]
A0A6S7LAR3	1.3e-25	70.97	Uncharacterized protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS5158 PE=4 SV=1	[more]

BLAST of Moc09g15810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g15810.1	Moc09g15810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion