Moc09g15730 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g15730
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionATP synthase subunit alpha
Locationchr9: 13091411 .. 13093443 (+)
RNA-Seq ExpressionMoc09g15730
SyntenyMoc09g15730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCCGTATTGCCCGAAGGGGGCATGCTGCAAGAGCGTAGGTGAGTGGTAAGCGTAGGAGGCGTGCCCAAAGGGCAGCGGCAGCTGTGTGGTTCCACGTCGCTAGATTGAGATCTGCAGGGTGGCGGGGACTTCGACTGCCTTGTATCAGGTGAAGATAAGGGGTGGTAGGCTTAGTAGGGCTCGAACCTACAATATAACCGTTATGAGCGGTACGTTTCAACCAATTAAACTATAAGCCCCTACGGATCTCTACATGCAATTCGCTCACTTCGGGAAGAGCGGACGGAAAGAGGAGGCCTTTGCTTTATTTGCTTCTTCCTCTTCCTTTAATGAAAAATGAACAATTGGAAAAACAAATTATTCTATATATATTATATAATATATATAGAATCTTAGATAGATATTATGAATTAGAATAATATAATTAAGCAAGCGGCCCTTTCGCGACTCAAACTGCCGGTACGCTTTCCGGCTCGGAACGACCGACTCAAACGGGCGGGGGCTCTCTATTTGCTTGCAATGCCGGCTGTTCGCCTTTAGTTAGAAGTAGAAGTAGAGGGCGCCCTTTGCCCCACACTGAAGAAAAAGTACATAAGGGGGGGGGACTTGTGAAAGTCAGGAGTGAGAAAGAAAAACTTGGTTACGGGAACCGAAGGTTAGGCCGATTTGAAGCTAGACCTAAAAAAGTTTATTCCTACCTCTTCCTGTCAATGTTGCCAATTCCCAAAAGACTAATCTAATAATGTACCCTTGTGCATACAGTTGCCCAACTACTCTTTCTTCCTTCGACTTCTTTAGCCACTTCCGAATCTGTCGTATTCAGGAGAGCTTGCTTCGTGGCGGAGCATTTAGCAATGCCAGCAGCCTGGTGAGGGCTGGCTGTCTGGGGACAGGTTAAGGCAGGGCCCTCTGGGCTTGCTTCTCATGAGATTGGGTGAGGGAATCGGAAAGGGGCTCATAAACCGAGCTGACTTCTCTTGACCCTTGCTTCCTCTCCTTCTGTATACTTCAGTGTATACAAGTATACGAGGCAAAGACTATTTGTTTGAACACTAGACTACTACTAGAAACTAGAGACTACGACTACAATATAAAACTAGAGACTACTCTTATACTTTATATATTCTATATAAAGAGTCTCTAGACTAGTAGTCATATCTAGACAATAGACTACTGTGGGTTAGTGATATCGAGATATCGGTAAGGTCAGATTGTCTACCTATCGCCTTAGTAAGGTAGTACTTTACTCTTGTCTTTCCTGAGCCGCGAGTGAGGCTGGAGAACGAGTCAGGCGAAGCCCTTTCCTTCCCTTTCCTTACTTTAGGGCTTGCTTGCCTTTAGGTAAGGGAATAGTCCAACTTTCGACCCTATTGGGCTTCCAGTACTTTCTATTCCCGGTAACAAGGTAATAGCTCTTTTCCTAAAGCGCTTGTTCTGCTAGGGCCCTCTTCTGTTCCTGTATAAGTAACAGGATAGCAGTCCGTTATTCTATGGCTTCGGGAGGCTCCTTTCATACAAAAAGAGTTGACCCGTGATCTACGACCACCCTCTCCCCGCCCGAGAGTGAAAACACTACCCCTGAGGGTGGCCGTAGATCACGGGCCTCTAACTTATCTACGGAAAGGCTGCTTAAAGTACGTACACACAGGCAAGAGAGAGAACGCACAAGCGGTACGTACGGTAAGAGCAAACTGTCTTATTGGCTATTACCGAATCGAAAGTGCTTAAACCTCTCTTCTTTCTGTCAGTCTACTTTACTGACTGAAAAACGGGAAGTCACTCATTCAAACCTCCCGCCCTCTCCAGTCAGGCGGGCGAAGCGCATTAATAGGAGCGAAGCGTATGTTTCTCTTAATAATTATATATAAAGATATAGTCATTATACAGACTTCAATGGTTGAGACGCGACTCGAAGGTCTCATCCACTCGCCCTTCCCAATCCATATTCCAATGTCGGGAGGAAAGCTCAATATGGTATAGTCGAGGTAGACGTCTCTGTGTGTGTGGAAAAAGAGGAGGAGCTTTGA

mRNA sequence

ATGAAAGCCGTATTGCCCGAAGGGGGCATGCTGCAAGAGCGTAGGGTGGCGGGGACTTCGACTGCCTTGTATCAGGTGAAGATAAGGGGTGGTAGGCTTAGTAGGGCTCGAACCTACAATATAACCGTTATGAGCGCAAGCGGCCCTTTCGCGACTCAAACTGCCGGTACGCTTTCCGGCTCGGAACGACCGACTCAAACGGGCGGGGGCTCTCTATTTGCTTGCAATGCCGGCTGTTCGCCTTTAGTTAGAAGTAGAAGTAGAGGGCGCCCTTTGCCCCACACTGAAGAAAAAGTACATAAGGGGGGGGGACTTGTGAAAGTCAGGAGTGAGAAAGAAAAACTTGGTTACGGGAACCGAAGTTGCCCAACTACTCTTTCTTCCTTCGACTTCTTTAGCCACTTCCGAATCTGTCGTATTCAGGAGAGCTTGCTTCGTGGCGGAGCATTTAGCAATGCCAGCAGCCTGGTGAGGGCTGGCTGTCTGGGGACAGGTAAGGGAATAGTCCAACTTTCGACCCTATTGGGCTTCCAGTACTTTCTATTCCCGTCTACTTTACTGACTGAAAAACGGGAAGTCACTCATTCAAACCTCCCGCCCTCTCCAGTCAGGCGGGCGAAGCGCATTAATAGGAGCGAAGCGTCTCATCCACTCGCCCTTCCCAATCCATATTCCAATGTCGGGAGGAAAGCTCAATATGGTATAGTCGAGGTAGACGTCTCTGTGTGTGTGGAAAAAGAGGAGGAGCTTTGA

Coding sequence (CDS)

ATGAAAGCCGTATTGCCCGAAGGGGGCATGCTGCAAGAGCGTAGGGTGGCGGGGACTTCGACTGCCTTGTATCAGGTGAAGATAAGGGGTGGTAGGCTTAGTAGGGCTCGAACCTACAATATAACCGTTATGAGCGCAAGCGGCCCTTTCGCGACTCAAACTGCCGGTACGCTTTCCGGCTCGGAACGACCGACTCAAACGGGCGGGGGCTCTCTATTTGCTTGCAATGCCGGCTGTTCGCCTTTAGTTAGAAGTAGAAGTAGAGGGCGCCCTTTGCCCCACACTGAAGAAAAAGTACATAAGGGGGGGGGACTTGTGAAAGTCAGGAGTGAGAAAGAAAAACTTGGTTACGGGAACCGAAGTTGCCCAACTACTCTTTCTTCCTTCGACTTCTTTAGCCACTTCCGAATCTGTCGTATTCAGGAGAGCTTGCTTCGTGGCGGAGCATTTAGCAATGCCAGCAGCCTGGTGAGGGCTGGCTGTCTGGGGACAGGTAAGGGAATAGTCCAACTTTCGACCCTATTGGGCTTCCAGTACTTTCTATTCCCGTCTACTTTACTGACTGAAAAACGGGAAGTCACTCATTCAAACCTCCCGCCCTCTCCAGTCAGGCGGGCGAAGCGCATTAATAGGAGCGAAGCGTCTCATCCACTCGCCCTTCCCAATCCATATTCCAATGTCGGGAGGAAAGCTCAATATGGTATAGTCGAGGTAGACGTCTCTGTGTGTGTGGAAAAAGAGGAGGAGCTTTGA

Protein sequence

MKAVLPEGGMLQERRVAGTSTALYQVKIRGGRLSRARTYNITVMSASGPFATQTAGTLSGSERPTQTGGGSLFACNAGCSPLVRSRSRGRPLPHTEEKVHKGGGLVKVRSEKEKLGYGNRSCPTTLSSFDFFSHFRICRIQESLLRGGAFSNASSLVRAGCLGTGKGIVQLSTLLGFQYFLFPSTLLTEKREVTHSNLPPSPVRRAKRINRSEASHPLALPNPYSNVGRKAQYGIVEVDVSVCVEKEEEL
Homology
[Close]
BLAST of Moc09g15730 vs. NCBI nr
Match: KVH76722.1 (ATPase, alpha/beta subunit, N-terminal [Cynara cardunculus var. scolymus])

HSP 1 Score: 55.8 bits (133), Expect = 6.0e-04
Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 0 

Query: 126 LSSFDFFSHF-----RICRIQESLLRGGAFSNASSL 157
           LSSFDFFSHF     RICRI+ESLLRGGAF+NASSL
Sbjct: 524 LSSFDFFSHFRLPHLRICRIRESLLRGGAFNNASSL 559

[Close]
BLAST of Moc09g15730 vs. NCBI nr
Match: EEF30647.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 55.5 bits (132), Expect = 7.9e-04
Identity = 31/45 (68.89%), Postives = 32/45 (71.11%), Query Frame = 0 

Query: 15  RVAGTSTALYQVKIRGGRLSRARTYNITVMSASGPFATQTAGTLS 60
           RVAGTSTALY+VK RGGRLSRARTYNIT     GP    T G  S
Sbjct: 75  RVAGTSTALYRVKRRGGRLSRARTYNITHEIPEGPLHPPTEGPSS 119

[Close]
BLAST of Moc09g15730 vs. ExPASy TrEMBL
Match: A0A118JJY7 (ATP synthase subunit alpha OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_025535 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.9e-04
Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 0 

Query: 126 LSSFDFFSHF-----RICRIQESLLRGGAFSNASSL 157
           LSSFDFFSHF     RICRI+ESLLRGGAF+NASSL
Sbjct: 524 LSSFDFFSHFRLPHLRICRIRESLLRGGAFNNASSL 559

[Close]
BLAST of Moc09g15730 vs. ExPASy TrEMBL
Match: B9T0F8 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1113180 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.8e-04
Identity = 31/45 (68.89%), Postives = 32/45 (71.11%), Query Frame = 0 

Query: 15  RVAGTSTALYQVKIRGGRLSRARTYNITVMSASGPFATQTAGTLS 60
           RVAGTSTALY+VK RGGRLSRARTYNIT     GP    T G  S
Sbjct: 75  RVAGTSTALYRVKRRGGRLSRARTYNITHEIPEGPLHPPTEGPSS 119

The following BLAST results are available for this feature:
BLAST of Moc09g15730 vs. NCBI nr
Match NameE-valueIdentityDescription
KVH76722.16.0e-0480.56ATPase, alpha/beta subunit, N-terminal [Cynara cardunculus var. scolymus][more]
EEF30647.17.9e-0468.89conserved hypothetical protein [Ricinus communis][more]
BLAST of Moc09g15730 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc09g15730 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A118JJY72.9e-0480.56ATP synthase subunit alpha OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_... [more]
B9T0F83.8e-0468.89Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1113180 PE=4 SV=1[more]
BLAST of Moc09g15730 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g15730.1Moc09g15730.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0031090 organelle membrane
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function GO:0005524 ATP binding
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism