Moc09g15680 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g15680
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr9: 13071604 .. 13071882 (-)
RNA-Seq ExpressionMoc09g15680
SyntenyMoc09g15680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCTCCAGCTCGCAACCACAGGGGCTCAGCGGTCAGGTCCGCCCCCATTCGAATTACGTTAGGAGGTCTTTCGCTTTTGCCAGATCTAGAGAGATACTACGAGTCCTCCGTCCCAGATTCCATCGCCGCGGCCATCTGGTTCACCGGTACTACCAAAAAGTCTCATGCTTACGTTACTGTTATTGATGGTTTTATTATCTTGGACCCCGGTCGTGCTTCTGGTTTCCATTCCCATCATCATATTGATGATAAATCTCCTCGTGCTCCGCCATAA

mRNA sequence

ATGGCAGCTCCAGCTCGCAACCACAGGGGCTCAGCGGTCAGGTCCGCCCCCATTCGAATTACGTTAGGAGGTCTTTCGCTTTTGCCAGATCTAGAGAGATACTACGAGTCCTCCGTCCCAGATTCCATCGCCGCGGCCATCTGGTTCACCGGTACTACCAAAAAGTCTCATGCTTACGTTACTGTTATTGATGGTTTTATTATCTTGGACCCCGGTCGTGCTTCTGGTTTCCATTCCCATCATCATATTGATGATAAATCTCCTCGTGCTCCGCCATAA

Coding sequence (CDS)

ATGGCAGCTCCAGCTCGCAACCACAGGGGCTCAGCGGTCAGGTCCGCCCCCATTCGAATTACGTTAGGAGGTCTTTCGCTTTTGCCAGATCTAGAGAGATACTACGAGTCCTCCGTCCCAGATTCCATCGCCGCGGCCATCTGGTTCACCGGTACTACCAAAAAGTCTCATGCTTACGTTACTGTTATTGATGGTTTTATTATCTTGGACCCCGGTCGTGCTTCTGGTTTCCATTCCCATCATCATATTGATGATAAATCTCCTCGTGCTCCGCCATAA

Protein sequence

MAAPARNHRGSAVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGFIILDPGRASGFHSHHHIDDKSPRAPP
Homology
[Close]
BLAST of Moc09g15680 vs. NCBI nr
Match: YP_009941491.1 (hypothetical protein [Fagus sylvatica] >QOC70549.1 hypothetical protein [Fagus sylvatica] >QVG61344.1 hypothetical protein [Fagus sylvatica] >QVG61399.1 hypothetical protein [Fagus sylvatica])

HSP 1 Score: 165.6 bits (418), Expect = 2.0e-37
Identity = 86/103 (83.50%), Postives = 88/103 (85.44%), Query Frame = 0 

Query: 1   MAAPARNHR--------GSAVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT 60
           MAAPARNHR        GSAVR APIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT
Sbjct: 1   MAAPARNHRGPPCEARVGSAVRLAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT 60

Query: 61  TKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPRAPP 93
           TKKSHAYVT+ DGFIIL   DP RASGFHSHHHID+KSPRA P
Sbjct: 61  TKKSHAYVTLTDGFIILDHEDPSRASGFHSHHHIDEKSPRALP 103

[Close]
BLAST of Moc09g15680 vs. NCBI nr
Match: KAB5511269.1 (hypothetical protein DKX38_030064 [Salix brachista] >KAF9660739.1 hypothetical protein SADUNF_SadunfMtG0004600 [Salix dunnii] >KAG6736844.1 hypothetical protein POTOM_060229 [Populus tomentosa])

HSP 1 Score: 164.1 bits (414), Expect = 5.8e-37
Identity = 86/103 (83.50%), Postives = 86/103 (83.50%), Query Frame = 0 

Query: 1   MAAPARNHRGS--------AVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT 60
           MAAPARNH           A RSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT
Sbjct: 1   MAAPARNHGTGARHARPEWAQRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT 60

Query: 61  TKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPRAPP 93
           TKKSHAYVTVIDG IIL   DPGRASGFHSHHHID KSPRAPP
Sbjct: 61  TKKSHAYVTVIDGLIILDHEDPGRASGFHSHHHIDGKSPRAPP 103

[Close]
BLAST of Moc09g15680 vs. NCBI nr
Match: KAG6585906.1 (hypothetical protein SDJN03_18639, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 79/90 (87.78%), Postives = 81/90 (90.00%), Query Frame = 0 

Query: 3   APARNHRGSAVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTV 62
           A     RG A RSAPIRITLGGLSLLPD +RYYESSVPDSIAAAIWFTGTTKKSHAYVTV
Sbjct: 18  ANTERERG-AGRSAPIRITLGGLSLLPDRQRYYESSVPDSIAAAIWFTGTTKKSHAYVTV 77

Query: 63  IDGFIILDPGRASGFHSHHHIDDKSPRAPP 93
           IDG IILDPGRASGFHSHHHID+KSPRAPP
Sbjct: 78  IDGLIILDPGRASGFHSHHHIDEKSPRAPP 106

[Close]
BLAST of Moc09g15680 vs. NCBI nr
Match: PNS22340.1 (hypothetical protein POPTR_T152800 [Populus trichocarpa])

HSP 1 Score: 158.3 bits (399), Expect = 3.2e-35
Identity = 83/103 (80.58%), Postives = 84/103 (81.55%), Query Frame = 0 

Query: 1   MAAPARNHRGS--------AVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT 60
           MAAPARNH           A RSAPIRITLGGLSLLPDLERYYESSV DSIAAA+WFT T
Sbjct: 1   MAAPARNHGTGTRHARPEWAQRSAPIRITLGGLSLLPDLERYYESSVSDSIAAAVWFTST 60

Query: 61  TKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPRAPP 93
           TKKSHAYVTVIDG IIL   DPGRASGFHSHHHID KSPRAPP
Sbjct: 61  TKKSHAYVTVIDGLIILDHEDPGRASGFHSHHHIDGKSPRAPP 103

[Close]
BLAST of Moc09g15680 vs. NCBI nr
Match: KAF3452218.1 (hypothetical protein FNV43_RR08316 [Rhamnella rubrinervis])

HSP 1 Score: 157.9 bits (398), Expect = 4.1e-35
Identity = 81/98 (82.65%), Postives = 84/98 (85.71%), Query Frame = 0 

Query: 1  MAAPARNHR--------GSAVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT 60
          MAAPARNH+        GSAVR APIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT
Sbjct: 1  MAAPARNHKGPPCEARVGSAVRLAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT 60

Query: 61 TKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKS 88
          TKKSHAYVT I+G IIL   DPGRASGFHSHHHIDDK+
Sbjct: 61 TKKSHAYVTAIEGLIILDHEDPGRASGFHSHHHIDDKN 98

[Close]
BLAST of Moc09g15680 vs. ExPASy TrEMBL
Match: A0A7L7T775 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=ORF15 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 9.6e-38
Identity = 86/103 (83.50%), Postives = 88/103 (85.44%), Query Frame = 0 

Query: 1   MAAPARNHR--------GSAVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT 60
           MAAPARNHR        GSAVR APIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT
Sbjct: 1   MAAPARNHRGPPCEARVGSAVRLAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT 60

Query: 61  TKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPRAPP 93
           TKKSHAYVT+ DGFIIL   DP RASGFHSHHHID+KSPRA P
Sbjct: 61  TKKSHAYVTLTDGFIILDHEDPSRASGFHSHHHIDEKSPRALP 103

[Close]
BLAST of Moc09g15680 vs. ExPASy TrEMBL
Match: A0A6N2KU69 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS115143 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.8e-37
Identity = 86/103 (83.50%), Postives = 86/103 (83.50%), Query Frame = 0 

Query: 1   MAAPARNHRGS--------AVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT 60
           MAAPARNH           A RSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT
Sbjct: 1   MAAPARNHGTGARHARPEWAQRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT 60

Query: 61  TKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPRAPP 93
           TKKSHAYVTVIDG IIL   DPGRASGFHSHHHID KSPRAPP
Sbjct: 61  TKKSHAYVTVIDGLIILDHEDPGRASGFHSHHHIDGKSPRAPP 103

[Close]
BLAST of Moc09g15680 vs. ExPASy TrEMBL
Match: A0A6M2EB46 (Uncharacterized protein OS=Populus davidiana OX=266767 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.8e-37
Identity = 86/103 (83.50%), Postives = 86/103 (83.50%), Query Frame = 0 

Query: 1   MAAPARNHRGS--------AVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT 60
           MAAPARNH           A RSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT
Sbjct: 1   MAAPARNHGTGARHARPEWAQRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT 60

Query: 61  TKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPRAPP 93
           TKKSHAYVTVIDG IIL   DPGRASGFHSHHHID KSPRAPP
Sbjct: 61  TKKSHAYVTVIDGLIILDHEDPGRASGFHSHHHIDGKSPRAPP 103

[Close]
BLAST of Moc09g15680 vs. ExPASy TrEMBL
Match: A0A5N5IVC1 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_030064 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.8e-37
Identity = 86/103 (83.50%), Postives = 86/103 (83.50%), Query Frame = 0 

Query: 1   MAAPARNHRGS--------AVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT 60
           MAAPARNH           A RSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT
Sbjct: 1   MAAPARNHGTGARHARPEWAQRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT 60

Query: 61  TKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSPRAPP 93
           TKKSHAYVTVIDG IIL   DPGRASGFHSHHHID KSPRAPP
Sbjct: 61  TKKSHAYVTVIDGLIILDHEDPGRASGFHSHHHIDGKSPRAPP 103

[Close]
BLAST of Moc09g15680 vs. ExPASy TrEMBL
Match: A0A2N9JB91 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61712 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.8e-36
Identity = 83/99 (83.84%), Postives = 85/99 (85.86%), Query Frame = 0 

Query: 1  MAAPARNHR--------GSAVRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT 60
          MAAPARNHR        GSAVR APIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT
Sbjct: 1  MAAPARNHRGPPCEARVGSAVRLAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGT 60

Query: 61 TKKSHAYVTVIDGFIIL---DPGRASGFHSHHHIDDKSP 89
          TKKSHAYVT+ DGFIIL   DP RASGFHSHHHID+KSP
Sbjct: 61 TKKSHAYVTLTDGFIILDHEDPSRASGFHSHHHIDEKSP 99

The following BLAST results are available for this feature:
BLAST of Moc09g15680 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009941491.12.0e-3783.50hypothetical protein [Fagus sylvatica] >QOC70549.1 hypothetical protein [Fagus s... [more]
KAB5511269.15.8e-3783.50hypothetical protein DKX38_030064 [Salix brachista] >KAF9660739.1 hypothetical p... [more]
KAG6585906.11.1e-3587.78hypothetical protein SDJN03_18639, partial [Cucurbita argyrosperma subsp. sorori... [more]
PNS22340.13.2e-3580.58hypothetical protein POPTR_T152800 [Populus trichocarpa][more]
KAF3452218.14.1e-3582.65hypothetical protein FNV43_RR08316 [Rhamnella rubrinervis][more]
BLAST of Moc09g15680 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc09g15680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7L7T7759.6e-3883.50Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=ORF15 PE=4 SV=1[more]
A0A6N2KU692.8e-3783.50Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS115143 PE=4 SV=... [more]
A0A6M2EB462.8e-3783.50Uncharacterized protein OS=Populus davidiana OX=266767 PE=4 SV=1[more]
A0A5N5IVC12.8e-3783.50Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_030064 PE=4 SV=1[more]
A0A2N9JB911.8e-3683.84Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61712 PE=4 SV=1[more]
BLAST of Moc09g15680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g15680.1Moc09g15680.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion