Moc09g15560 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g15560
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribosomal protein L2
Location	chr9: 13048542 .. 13049453 (-)
RNA-Seq Expression	Moc09g15560
Synteny	Moc09g15560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTACGATCTCGACAATGAGACAAAGCCAAGAGGGGAGAGCACTTAGACAATTCACTTTGAGTACAGGGAAGTCTGCTGGTAGGAATTCCTCAGGGCGTATTACGGTTTTTCACCGAGGGGGTGGATCGAAGCGATTGCAGCGAAGAATTGATCTGAAACGAAGCACTTCGTCTATGGGCATTGTAGAAAGAATAGAATATGACCCTAATCGTTCTTCTCGGATCGCTCCAGTACGATGGATCGAGGGGGTCCGCCAGAGGAAATGCAAGACGATAGAGGAGTTCGCTCCGCCGCGTAAGATCCTCGAACCTACCACGACCACCATCCGCGGCCTATTTTCGTTCTCTTCCCCGCCCGGGAAGGTGGATCAAAGAAAGGTAGCTTGCTTCTCTCCTGGACTGATGGCGGCTTATGTAGTGGTCGGCCTTCCTACCAGGATGCCCCCTTGGTCGAAGAGCCCCTTTACTAGTACTAGTAAGGGCGCAGGAAGCAAAAAAACTTGCGCGAAGGACGTTTTCTTCTCTGCCTTCTCCTCTCAAAAGACCAAGGGAGAGACTGCATCCCTTTCCTTCGGTAGCTCTTTTGGTTTCCCAAGGATAGCGGTAGCTGGGGCAAAGCCCGCTTTCTTCGCTCCGCGAATGAGAGCTAAACTCAGAGGAAAAAACACGTTCTCTCTTTGCGAGGTCCGAAAGTGGAGAACGCATAGCATTCTCTGGGCACATAGGATTAAACGTAAAGCTGCGCTTTCTTGGCGGAGTTTTAGGCGGCAAGAGACTTTAGGGCTTGTTGGAGGTGCTGAGCCTAACGAATCGAAACCAGAGACGGATCAAGGTAGCTTGCCTGCCAAGCCGATAGGCTCAGGGCCGAAGGATGGAGCGTGCAAAGTCAATCGTGCACCTGTCGTGTGA

mRNA sequence

ATGATTACGATCTCGACAATGAGACAAAGCCAAGAGGGGAGAGCACTTAGACAATTCACTTTGAGTACAGGGAAGTCTGCTGGTAGGAATTCCTCAGGGCGTATTACGGTTTTTCACCGAGGGGGTGGATCGAAGCGATTGCAGCGAAGAATTGATCTGAAACGAAGCACTTCGTCTATGGGCATTGTAGAAAGAATAGAATATGACCCTAATCGTTCTTCTCGGATCGCTCCAGTACGATGGATCGAGGGGGTCCGCCAGAGGAAATGCAAGACGATAGAGGAGTTCGCTCCGCCGCGTAAGATCCTCGAACCTACCACGACCACCATCCGCGGCCTATTTTCGTTCTCTTCCCCGCCCGGGAAGGTGGATCAAAGAAAGGTAGCTTGCTTCTCTCCTGGACTGATGGCGGCTTATGTAGTGGTCGGCCTTCCTACCAGGATGCCCCCTTGGTCGAAGAGCCCCTTTACTAGTACTAGTAAGGGCGCAGGAAGCAAAAAAACTTGCGCGAAGGACGTTTTCTTCTCTGCCTTCTCCTCTCAAAAGACCAAGGGAGAGACTGCATCCCTTTCCTTCGGTAGCTCTTTTGGTTTCCCAAGGATAGCGGTAGCTGGGGCAAAGCCCGCTTTCTTCGCTCCGCGAATGAGAGCTAAACTCAGAGGAAAAAACACGTTCTCTCTTTGCGAGGTCCGAAAGTGGAGAACGCATAGCATTCTCTGGGCACATAGGATTAAACGTAAAGCTGCGCTTTCTTGGCGGAGTTTTAGGCGGCAAGAGACTTTAGGGCTTGTTGGAGGTGCTGAGCCTAACGAATCGAAACCAGAGACGGATCAAGGTAGCTTGCCTGCCAAGCCGATAGGCTCAGGGCCGAAGGATGGAGCGTGCAAAGTCAATCGTGCACCTGTCGTGTGA

Coding sequence (CDS)

ATGATTACGATCTCGACAATGAGACAAAGCCAAGAGGGGAGAGCACTTAGACAATTCACTTTGAGTACAGGGAAGTCTGCTGGTAGGAATTCCTCAGGGCGTATTACGGTTTTTCACCGAGGGGGTGGATCGAAGCGATTGCAGCGAAGAATTGATCTGAAACGAAGCACTTCGTCTATGGGCATTGTAGAAAGAATAGAATATGACCCTAATCGTTCTTCTCGGATCGCTCCAGTACGATGGATCGAGGGGGTCCGCCAGAGGAAATGCAAGACGATAGAGGAGTTCGCTCCGCCGCGTAAGATCCTCGAACCTACCACGACCACCATCCGCGGCCTATTTTCGTTCTCTTCCCCGCCCGGGAAGGTGGATCAAAGAAAGGTAGCTTGCTTCTCTCCTGGACTGATGGCGGCTTATGTAGTGGTCGGCCTTCCTACCAGGATGCCCCCTTGGTCGAAGAGCCCCTTTACTAGTACTAGTAAGGGCGCAGGAAGCAAAAAAACTTGCGCGAAGGACGTTTTCTTCTCTGCCTTCTCCTCTCAAAAGACCAAGGGAGAGACTGCATCCCTTTCCTTCGGTAGCTCTTTTGGTTTCCCAAGGATAGCGGTAGCTGGGGCAAAGCCCGCTTTCTTCGCTCCGCGAATGAGAGCTAAACTCAGAGGAAAAAACACGTTCTCTCTTTGCGAGGTCCGAAAGTGGAGAACGCATAGCATTCTCTGGGCACATAGGATTAAACGTAAAGCTGCGCTTTCTTGGCGGAGTTTTAGGCGGCAAGAGACTTTAGGGCTTGTTGGAGGTGCTGAGCCTAACGAATCGAAACCAGAGACGGATCAAGGTAGCTTGCCTGCCAAGCCGATAGGCTCAGGGCCGAAGGATGGAGCGTGCAAAGTCAATCGTGCACCTGTCGTGTGA

Protein sequence

MITISTMRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGAKPAFFAPRMRAKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEPNESKPETDQGSLPAKPIGSGPKDGACKVNRAPVV

Homology

[Close]

BLAST of Moc09g15560 vs. NCBI nr
Match: YP_009913619.1 (ribosomal protein L2 [Luffa acutangula] >QLJ93019.1 ribosomal protein L2 [Luffa acutangula])

HSP 1 Score: 571.2 bits (1471), Expect = 5.2e-159
Identity = 290/296 (97.97%), Postives = 291/296 (98.31%), Query Frame = 0


Query: 7   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 66
           MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQR ID KRSTSSMGIVERI
Sbjct: 1   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRIIDKKRSTSSMGIVERI 60

Query: 67  EYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR 126
           EYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR
Sbjct: 61  EYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR 120

Query: 127 KVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGE 186
           KVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGE
Sbjct: 121 KVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGE 180

Query: 187 TASLSFGSSFGFPRIAVAGAKPAFFAPRMRAKLRGKNTFSLCEVRKWRTHSILWAHRIKR 246
           TASLSFGSSFGFPRIAVAGAKPAFFAPRMR KLRGKNTFSLCEVRKWRTHSILWAHR+KR
Sbjct: 181 TASLSFGSSFGFPRIAVAGAKPAFFAPRMREKLRGKNTFSLCEVRKWRTHSILWAHRMKR 240

Query: 247 KAALSWRSFRRQETLGLVGGAEPNESKPETDQGSLPAKPIGSGPKDGACKVNRAPV 303
           KAALSWRSFRRQETLGLVGGAE NESKPETDQGSLPAKPIG GPKDGACKVNRAPV
Sbjct: 241 KAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPV 296

[Close]

BLAST of Moc09g15560 vs. NCBI nr
Match: YP_003587229.1 (ribosomal protein L2 [Citrullus lanatus] >ACV96645.1 ribosomal protein L2 [Citrullus lanatus])

HSP 1 Score: 562.4 bits (1448), Expect = 2.4e-156
Identity = 288/296 (97.30%), Postives = 289/296 (97.64%), Query Frame = 0


Query: 7   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 66
           MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI
Sbjct: 1   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 60

Query: 67  EYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR 126
           EYDPNRSSRIA VRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR
Sbjct: 61  EYDPNRSSRIALVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR 120

Query: 127 KVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGE 186
           KVACFSPG MAAYVVVGLPTRMPPWSKSPF  TSKGAGSKKTCAKDVFFSAFSSQKTKGE
Sbjct: 121 KVACFSPGRMAAYVVVGLPTRMPPWSKSPF--TSKGAGSKKTCAKDVFFSAFSSQKTKGE 180

Query: 187 TASLSFGSSFGFPRIAVAGAKPAFFAPRMRAKLRGKNTFSLCEVRKWRTHSILWAHRIKR 246
           TASLSFGSSFGFPR+AVAGAKPAFFAPRMR KLRGKNTFSLCEVRKWRTHSILWAHRIKR
Sbjct: 181 TASLSFGSSFGFPRVAVAGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKR 240

Query: 247 KAALSWRSFRRQETLGLVGGAEPNESKPETDQGSLPAKPIGSGPKDGACKVNRAPV 303
           KAALSWRSFRRQETLGLVGGAE NESKPETDQGSLPAKPIG GPKDGACKVNRAPV
Sbjct: 241 KAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPV 294

[Close]

BLAST of Moc09g15560 vs. NCBI nr
Match: WP_131796642.1 (hypothetical protein [Candidatus Frankia datiscae])

HSP 1 Score: 543.9 bits (1400), Expect = 8.8e-151
Identity = 282/298 (94.63%), Postives = 285/298 (95.64%), Query Frame = 0


Query: 7   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 66
           MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI
Sbjct: 1   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 60

Query: 67  EYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR 126
           EYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR
Sbjct: 61  EYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR 120

Query: 127 KVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGE 186
           KVA FSPG MAAYVVVGLPTRMPPWSKSPF  TSKGAGS+ TCAKDVFFSAFSS K KGE
Sbjct: 121 KVASFSPGRMAAYVVVGLPTRMPPWSKSPF--TSKGAGSQITCAKDVFFSAFSSPKAKGE 180

Query: 187 TASLSFGSS-FGFPRIAVAGAKPAFFAPRMRAKLRGKNTFSLCEVRKWRTHSILWAHRIK 246
           T+SLSFGSS F FPRIAVAGAKPAFFAPRMR KLRGKNTFSLCEVRKWRTHSILWAHRIK
Sbjct: 181 TSSLSFGSSFFCFPRIAVAGAKPAFFAPRMREKLRGKNTFSLCEVRKWRTHSILWAHRIK 240

Query: 247 RKAALSWRSFRRQETLGLVGGAEPNESKPETDQGSLPAKPIGSGPKDGACKVNRAPVV 304
           RKAALSW+SFRRQETLGLVGGAE NESKPETDQGSLP KPIG GPKDGACKVNRAPVV
Sbjct: 241 RKAALSWQSFRRQETLGLVGGAEHNESKPETDQGSLPGKPIGEGPKDGACKVNRAPVV 296

[Close]

BLAST of Moc09g15560 vs. NCBI nr
Match: YP_003587363.1 (ribosomal protein L2 [Cucurbita pepo] >ACV96687.1 ribosomal protein L2 [Cucurbita pepo])

HSP 1 Score: 538.1 bits (1385), Expect = 4.9e-149
Identity = 278/296 (93.92%), Postives = 282/296 (95.27%), Query Frame = 0


Query: 7   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 66
           MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI
Sbjct: 1   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 60

Query: 67  EYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR 126
           EYDPNRSSRIA VRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSS PGKVDQR
Sbjct: 61  EYDPNRSSRIALVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSTPGKVDQR 120

Query: 127 KVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGE 186
           KVACFSPG MAAYVVVGLPTR+PP SKSPF  TSKGAGSKKTCAKDVFFSAFSSQKTKGE
Sbjct: 121 KVACFSPGQMAAYVVVGLPTRIPPCSKSPF--TSKGAGSKKTCAKDVFFSAFSSQKTKGE 180

Query: 187 TASLSFGSSFGFPRIAVAGAKPAFFAPRMRAKLRGKNTFSLCEVRKWRTHSILWAHRIKR 246
           TASLSFGSS GFPRIAVAGAKPAFFAPRMR K+RGKNTFSLCEVRKWRTHSILWAHR+KR
Sbjct: 181 TASLSFGSSLGFPRIAVAGAKPAFFAPRMREKVRGKNTFSLCEVRKWRTHSILWAHRMKR 240

Query: 247 KAALSWRSFRRQETLGLVGGAEPNESKPETDQGSLPAKPIGSGPKDGACKVNRAPV 303
           KAAL W+SFRRQET GLVGGAE NESKPETD  SLPAKPIG GPKDGACKVNRAPV
Sbjct: 241 KAALDWQSFRRQETDGLVGGAEHNESKPETDPASLPAKPIGEGPKDGACKVNRAPV 294

[Close]

BLAST of Moc09g15560 vs. NCBI nr
Match: YP_009706786.1 (ribosomal protein L2 [Ilex pubescens] >QEP49780.1 ribosomal protein L2 [Ilex pubescens])

HSP 1 Score: 533.9 bits (1374), Expect = 9.2e-148
Identity = 276/300 (92.00%), Postives = 282/300 (94.00%), Query Frame = 0


Query: 7   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 66
           MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI
Sbjct: 1   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 60

Query: 67  EYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKV 126
           EYDPNRSSRIAPVRWIEGV   RQRKC TIEEFAPPRKILEPTTTTIRG FSFSS PGKV
Sbjct: 61  EYDPNRSSRIAPVRWIEGVQLGRQRKCNTIEEFAPPRKILEPTTTTIRGPFSFSSLPGKV 120

Query: 127 DQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKT 186
           DQRKVACFSPGLMAAYVVVGLPTRMPPWSKSP   TSKGAGS+KTCAKDVFFSA SS K 
Sbjct: 121 DQRKVACFSPGLMAAYVVVGLPTRMPPWSKSP--KTSKGAGSQKTCAKDVFFSALSSPKA 180

Query: 187 KGETASLSFGSSFGFPRIAVAGAKPAFFAPRMRAKLRGKNTFSLCEVRKWRTHSILWAHR 246
           KGETASLSFGSSF FPRIAVAGAKPAFFAPRMR K+RGKNTFSLCE+RKWRTHSILWAHR
Sbjct: 181 KGETASLSFGSSFAFPRIAVAGAKPAFFAPRMREKVRGKNTFSLCEIRKWRTHSILWAHR 240

Query: 247 IKRKAALSWRSFRRQETLGLVGGAEPNESKPETDQGSLPAKPIGSGPKDGACKVNRAPVV 304
           IKRKAALSW+SFRRQETLGLVG AE NESKP+TDQGSLPAKPIG GPKDG CKV+RAPVV
Sbjct: 241 IKRKAALSWQSFRRQETLGLVGAAEHNESKPKTDQGSLPAKPIGEGPKDGTCKVDRAPVV 298

[Close]

BLAST of Moc09g15560 vs. ExPASy Swiss-Prot
Match: P93311 (60S ribosomal protein L2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL2 PE=1 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 4.3e-124
Identity = 238/300 (79.33%), Postives = 253/300 (84.33%), Query Frame = 0


Query: 14  RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRS 73
           RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRL RRIDLKRSTSSMGIVE IEYDPNRS
Sbjct: 7   RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIEYDPNRS 66

Query: 74  SRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQRKVACFSP 133
           S+IAPVRWI+G  Q+K  TIE+FAPPRKILEPTT TI GLFSFS  PGKVD+RKVACFSP
Sbjct: 67  SQIAPVRWIKGGCQKKMNTIEKFAPPRKILEPTTNTISGLFSFSFLPGKVDKRKVACFSP 126

Query: 134 GLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFG 193
           GLMAAYVVVGLPT MPP S S     SKGAGS KT  KDVFFSAFSS K K ETASL+F 
Sbjct: 127 GLMAAYVVVGLPTGMPPLSSSKSAFASKGAGSTKTLVKDVFFSAFSSPKAKRETASLAFA 186

Query: 194 SSFGFPRIAVAGAKPAFFAPRMRAKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWR 253
           SSFGFPRIAVAGAKPAFFAPRMR K+RGK+TFSLCEV+K RTHSILWAHRIK KA LSW+
Sbjct: 187 SSFGFPRIAVAGAKPAFFAPRMRQKVRGKSTFSLCEVQKGRTHSILWAHRIKGKAGLSWQ 246

Query: 254 SFRRQETLGLVGGAEPNESKPETDQGSLPAKPIGS-----------GPKDGACKVNRAPV 303
           SFRRQ+TLGLVG A   +SKP+TDQG+LPAKPIG              KDGACKV+RAPV
Sbjct: 247 SFRRQDTLGLVGAAGHKKSKPKTDQGNLPAKPIGERAKQLKALRGLRAKDGACKVDRAPV 306

[Close]

BLAST of Moc09g15560 vs. ExPASy Swiss-Prot
Match: P0C8K6 (60S ribosomal protein L2, mitochondrial OS=Oryza sativa OX=4530 GN=RPL2 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.3e-85
Identity = 198/339 (58.41%), Postives = 209/339 (61.65%), Query Frame = 0


Query: 7   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 66
           MRQS +GRALR FTLSTGKSAGRNSSGRITVFHRGGGSKRLQR+IDLKRSTSS+GIVERI
Sbjct: 1   MRQSIKGRALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRKIDLKRSTSSIGIVERI 60

Query: 67  EYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKV 126
           EYDPNRSSRIA VRWIEGV   RQRK KTIEEFA PRKILE TT TI  LFSFSS     
Sbjct: 61  EYDPNRSSRIALVRWIEGVLPGRQRKFKTIEEFALPRKILESTTATIFCLFSFSS----- 120

Query: 127 DQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKT 186
                                                                  SS   
Sbjct: 121 ------------------------------------------------------LSSPLA 180

Query: 187 KGETASLSFGSSFGFPRIAVAGAKPAFFAPRMRAKLRGKNTFSLCEVRKWRTHSILWAHR 246
           +GETASLSFGSS GFPRIAVAGAKPAFFA RMR K  GK TFSLCE+RKWRTH +LWAHR
Sbjct: 181 QGETASLSFGSSLGFPRIAVAGAKPAFFAERMREKKIGKKTFSLCEIRKWRTHCVLWAHR 240

Query: 247 IKRKAALSWRSFRRQETLGLVGGAEPNESKPETDQ------------------------- 303
           IKRKAALSW+S R+Q+TL LVG AE NESK + DQ                         
Sbjct: 241 IKRKAALSWQSLRQQKTLELVGAAEHNESKLKADQGSLLPRQVLAYALCSGRPSYLHASR 280

[Close]

BLAST of Moc09g15560 vs. ExPASy Swiss-Prot
Match: Q2F969 (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=RPL2 PE=3 SV=2)

HSP 1 Score: 317.0 bits (811), Expect = 2.3e-85
Identity = 198/339 (58.41%), Postives = 209/339 (61.65%), Query Frame = 0


Query: 7   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 66
           MRQS +GRALR FTLSTGKSAGRNSSGRITVFHRGGGSKRLQR+IDLKRSTSS+GIVERI
Sbjct: 1   MRQSIKGRALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRKIDLKRSTSSIGIVERI 60

Query: 67  EYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKV 126
           EYDPNRSSRIA VRWIEGV   RQRK KTIEEFA PRKILE TT TI  LFSFSS     
Sbjct: 61  EYDPNRSSRIALVRWIEGVLPGRQRKFKTIEEFALPRKILESTTATIFCLFSFSS----- 120

Query: 127 DQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKT 186
                                                                  SS   
Sbjct: 121 ------------------------------------------------------LSSPLA 180

Query: 187 KGETASLSFGSSFGFPRIAVAGAKPAFFAPRMRAKLRGKNTFSLCEVRKWRTHSILWAHR 246
           +GETASLSFGSS GFPRIAVAGAKPAFFA RMR K  GK TFSLCE+RKWRTH +LWAHR
Sbjct: 181 QGETASLSFGSSLGFPRIAVAGAKPAFFAERMREKKIGKKTFSLCEIRKWRTHCVLWAHR 240

Query: 247 IKRKAALSWRSFRRQETLGLVGGAEPNESKPETDQ------------------------- 303
           IKRKAALSW+S R+Q+TL LVG AE NESK + DQ                         
Sbjct: 241 IKRKAALSWQSLRQQKTLELVGAAEHNESKLKADQGSLLPRQVLAYALCSGRPSYLHASR 280

[Close]

BLAST of Moc09g15560 vs. ExPASy Swiss-Prot
Match: P92812 (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=RPL2 PE=2 SV=2)

HSP 1 Score: 317.0 bits (811), Expect = 2.3e-85
Identity = 198/339 (58.41%), Postives = 209/339 (61.65%), Query Frame = 0


Query: 7   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 66
           MRQS +GRALR FTLSTGKSAGRNSSGRITVFHRGGGSKRLQR+IDLKRSTSS+GIVERI
Sbjct: 1   MRQSIKGRALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRKIDLKRSTSSIGIVERI 60

Query: 67  EYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKV 126
           EYDPNRSSRIA VRWIEGV   RQRK KTIEEFA PRKILE TT TI  LFSFSS     
Sbjct: 61  EYDPNRSSRIALVRWIEGVLPGRQRKFKTIEEFALPRKILESTTATIFCLFSFSS----- 120

Query: 127 DQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKT 186
                                                                  SS   
Sbjct: 121 ------------------------------------------------------LSSPLA 180

Query: 187 KGETASLSFGSSFGFPRIAVAGAKPAFFAPRMRAKLRGKNTFSLCEVRKWRTHSILWAHR 246
           +GETASLSFGSS GFPRIAVAGAKPAFFA RMR K  GK TFSLCE+RKWRTH +LWAHR
Sbjct: 181 QGETASLSFGSSLGFPRIAVAGAKPAFFAERMREKKIGKKTFSLCEIRKWRTHCVLWAHR 240

Query: 247 IKRKAALSWRSFRRQETLGLVGGAEPNESKPETDQ------------------------- 303
           IKRKAALSW+S R+Q+TL LVG AE NESK + DQ                         
Sbjct: 241 IKRKAALSWQSLRQQKTLELVGAAEHNESKLKADQGSLLPRQVLAYALCSGRPSYLHASR 280

[Close]

BLAST of Moc09g15560 vs. ExPASy Swiss-Prot
Match: P26859 (60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL2 PE=3 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 1.3e-32
Identity = 114/254 (44.88%), Postives = 138/254 (54.33%), Query Frame = 0


Query: 12  EGRALRQFTLSTGK-SAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDP 71
           +G+AL+Q T    + SAGRNSSGRITVFHRGGGSKRLQR+ID KRSTSSMGIVERIEYDP
Sbjct: 7   KGKALKQLTFHLKRNSAGRNSSGRITVFHRGGGSKRLQRKIDFKRSTSSMGIVERIEYDP 66

Query: 72  NRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQRKVAC 131
           NRSS IA VRWIEGV +   +     A  R+  E        LFSFSS P +  + K   
Sbjct: 67  NRSSWIALVRWIEGVLRPGKRLAFSKANSRR--EKNMFFFGLLFSFSSLPRQAQRIKYE- 126

Query: 132 FSPGLMAAYVVVGLPTR-MPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETAS 191
                          TR + P  +     +S   G++   AK+V                
Sbjct: 127 --------------KTRALRPCEQ--ILESSWVLGTRDLRAKEVSLG------------- 186

Query: 192 LSFGSSFGFPRIAVAGAKPAFFAPRMR-----------AKLRGKNTFSLCEVRKWRTHSI 251
              GS  G P IAVAGAKPAFFA RM+           + LRG+NTFS  E ++W+T S 
Sbjct: 187 -PLGSFLGLPSIAVAGAKPAFFAFRMKGPSSLTGRERLSPLRGENTFSQSEGQRWKTQS- 224

Query: 252 LWAHRIKRKAALSW 253
             A R ++   LSW
Sbjct: 247 -GAPR-RKSLVLSW 224

[Close]

BLAST of Moc09g15560 vs. ExPASy TrEMBL
Match: A0A7D5XZ32 (Ribosomal protein L2 OS=Luffa acutangula OX=56866 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 2.5e-159
Identity = 290/296 (97.97%), Postives = 291/296 (98.31%), Query Frame = 0


Query: 7   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 66
           MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQR ID KRSTSSMGIVERI
Sbjct: 1   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRIIDKKRSTSSMGIVERI 60

Query: 67  EYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR 126
           EYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR
Sbjct: 61  EYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR 120

Query: 127 KVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGE 186
           KVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGE
Sbjct: 121 KVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGE 180

Query: 187 TASLSFGSSFGFPRIAVAGAKPAFFAPRMRAKLRGKNTFSLCEVRKWRTHSILWAHRIKR 246
           TASLSFGSSFGFPRIAVAGAKPAFFAPRMR KLRGKNTFSLCEVRKWRTHSILWAHR+KR
Sbjct: 181 TASLSFGSSFGFPRIAVAGAKPAFFAPRMREKLRGKNTFSLCEVRKWRTHSILWAHRMKR 240

Query: 247 KAALSWRSFRRQETLGLVGGAEPNESKPETDQGSLPAKPIGSGPKDGACKVNRAPV 303
           KAALSWRSFRRQETLGLVGGAE NESKPETDQGSLPAKPIG GPKDGACKVNRAPV
Sbjct: 241 KAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPV 296

[Close]

BLAST of Moc09g15560 vs. ExPASy TrEMBL
Match: D5I399 (Ribosomal protein L2 OS=Citrullus lanatus OX=3654 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.2e-156
Identity = 288/296 (97.30%), Postives = 289/296 (97.64%), Query Frame = 0


Query: 7   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 66
           MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI
Sbjct: 1   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 60

Query: 67  EYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR 126
           EYDPNRSSRIA VRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR
Sbjct: 61  EYDPNRSSRIALVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR 120

Query: 127 KVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGE 186
           KVACFSPG MAAYVVVGLPTRMPPWSKSPF  TSKGAGSKKTCAKDVFFSAFSSQKTKGE
Sbjct: 121 KVACFSPGRMAAYVVVGLPTRMPPWSKSPF--TSKGAGSKKTCAKDVFFSAFSSQKTKGE 180

Query: 187 TASLSFGSSFGFPRIAVAGAKPAFFAPRMRAKLRGKNTFSLCEVRKWRTHSILWAHRIKR 246
           TASLSFGSSFGFPR+AVAGAKPAFFAPRMR KLRGKNTFSLCEVRKWRTHSILWAHRIKR
Sbjct: 181 TASLSFGSSFGFPRVAVAGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKR 240

Query: 247 KAALSWRSFRRQETLGLVGGAEPNESKPETDQGSLPAKPIGSGPKDGACKVNRAPV 303
           KAALSWRSFRRQETLGLVGGAE NESKPETDQGSLPAKPIG GPKDGACKVNRAPV
Sbjct: 241 KAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPV 294

[Close]

BLAST of Moc09g15560 vs. ExPASy TrEMBL
Match: D5I3E9 (Ribosomal protein L2 OS=Cucurbita pepo OX=3663 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 2.3e-149
Identity = 278/296 (93.92%), Postives = 282/296 (95.27%), Query Frame = 0


Query: 7   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 66
           MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI
Sbjct: 1   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 60

Query: 67  EYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR 126
           EYDPNRSSRIA VRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSS PGKVDQR
Sbjct: 61  EYDPNRSSRIALVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSTPGKVDQR 120

Query: 127 KVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGE 186
           KVACFSPG MAAYVVVGLPTR+PP SKSPF  TSKGAGSKKTCAKDVFFSAFSSQKTKGE
Sbjct: 121 KVACFSPGQMAAYVVVGLPTRIPPCSKSPF--TSKGAGSKKTCAKDVFFSAFSSQKTKGE 180

Query: 187 TASLSFGSSFGFPRIAVAGAKPAFFAPRMRAKLRGKNTFSLCEVRKWRTHSILWAHRIKR 246
           TASLSFGSS GFPRIAVAGAKPAFFAPRMR K+RGKNTFSLCEVRKWRTHSILWAHR+KR
Sbjct: 181 TASLSFGSSLGFPRIAVAGAKPAFFAPRMREKVRGKNTFSLCEVRKWRTHSILWAHRMKR 240

Query: 247 KAALSWRSFRRQETLGLVGGAEPNESKPETDQGSLPAKPIGSGPKDGACKVNRAPV 303
           KAAL W+SFRRQET GLVGGAE NESKPETD  SLPAKPIG GPKDGACKVNRAPV
Sbjct: 241 KAALDWQSFRRQETDGLVGGAEHNESKPETDPASLPAKPIGEGPKDGACKVNRAPV 294

[Close]

BLAST of Moc09g15560 vs. ExPASy TrEMBL
Match: A0A5C2I4L3 (Ribosomal protein L2 OS=Ilex pubescens OX=185543 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 4.4e-148
Identity = 276/300 (92.00%), Postives = 282/300 (94.00%), Query Frame = 0


Query: 7   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 66
           MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI
Sbjct: 1   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 60

Query: 67  EYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKV 126
           EYDPNRSSRIAPVRWIEGV   RQRKC TIEEFAPPRKILEPTTTTIRG FSFSS PGKV
Sbjct: 61  EYDPNRSSRIAPVRWIEGVQLGRQRKCNTIEEFAPPRKILEPTTTTIRGPFSFSSLPGKV 120

Query: 127 DQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKT 186
           DQRKVACFSPGLMAAYVVVGLPTRMPPWSKSP   TSKGAGS+KTCAKDVFFSA SS K 
Sbjct: 121 DQRKVACFSPGLMAAYVVVGLPTRMPPWSKSP--KTSKGAGSQKTCAKDVFFSALSSPKA 180

Query: 187 KGETASLSFGSSFGFPRIAVAGAKPAFFAPRMRAKLRGKNTFSLCEVRKWRTHSILWAHR 246
           KGETASLSFGSSF FPRIAVAGAKPAFFAPRMR K+RGKNTFSLCE+RKWRTHSILWAHR
Sbjct: 181 KGETASLSFGSSFAFPRIAVAGAKPAFFAPRMREKVRGKNTFSLCEIRKWRTHSILWAHR 240

Query: 247 IKRKAALSWRSFRRQETLGLVGGAEPNESKPETDQGSLPAKPIGSGPKDGACKVNRAPVV 304
           IKRKAALSW+SFRRQETLGLVG AE NESKP+TDQGSLPAKPIG GPKDG CKV+RAPVV
Sbjct: 241 IKRKAALSWQSFRRQETLGLVGAAEHNESKPKTDQGSLPAKPIGEGPKDGTCKVDRAPVV 298

[Close]

BLAST of Moc09g15560 vs. ExPASy TrEMBL
Match: G3EIZ1 (Ribosomal protein L2 OS=Cucumis sativus OX=3659 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 1.3e-147
Identity = 276/303 (91.09%), Postives = 282/303 (93.07%), Query Frame = 0


Query: 1   MITISTMRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSM 60
           MITIST RQSQEGRALRQFTLSTGKSAGRNSSGRITVFH GGGSKRLQRRIDLKRSTSSM
Sbjct: 1   MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHLGGGSKRLQRRIDLKRSTSSM 60

Query: 61  GIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPP 120
           GIVERIEYDPNRSSRI PVRWIEGVRQRKCKT EEFAP  +ILEPTTTTIRGLFSFSSPP
Sbjct: 61  GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPKPQILEPTTTTIRGLFSFSSPP 120

Query: 121 GKVDQRKVACFSPGLMAAYVVVGLP-TRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFS 180
           GKVDQRKVA FSPG MAAYVVVGLP TRMPPWS+SP TST KGAGSKKTCAKD+FFSAFS
Sbjct: 121 GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSRSPDTSTRKGAGSKKTCAKDLFFSAFS 180

Query: 181 SQKTKGETASLSFGSSFGFPRIAVAGAKPAFFAPRMRAKLRGKNTFSLCEVRKWRTHSIL 240
           SQKTKGETASLSFGSSF FPR+AVAGAKPAFFAPRMR K+RGK TFSLCEVRKWRTHSIL
Sbjct: 181 SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL 240

Query: 241 WAHRIKRKAALSWRSFRRQETLGLVGGAEPNESKPETDQGSLPAKPIGSGPKDGACKVNR 300
           WAHR+K KAALSWRSFRRQETLGLVGGAE  ESK E DQGSLPAKPIG GPKDGACKVNR
Sbjct: 241 WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVNR 300

Query: 301 APV 303
            PV
Sbjct: 301 VPV 303

[Close]

BLAST of Moc09g15560 vs. TAIR 10
Match: ATMG00560.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 445.7 bits (1145), Expect = 3.1e-125
Identity = 238/300 (79.33%), Postives = 253/300 (84.33%), Query Frame = 0


Query: 14  RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRS 73
           RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRL RRIDLKRSTSSMGIVE IEYDPNRS
Sbjct: 7   RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIEYDPNRS 66

Query: 74  SRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQRKVACFSP 133
           S+IAPVRWI+G  Q+K  TIE+FAPPRKILEPTT TI GLFSFS  PGKVD+RKVACFSP
Sbjct: 67  SQIAPVRWIKGGCQKKMNTIEKFAPPRKILEPTTNTISGLFSFSFLPGKVDKRKVACFSP 126

Query: 134 GLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFG 193
           GLMAAYVVVGLPT MPP S S     SKGAGS KT  KDVFFSAFSS K K ETASL+F 
Sbjct: 127 GLMAAYVVVGLPTGMPPLSSSKSAFASKGAGSTKTLVKDVFFSAFSSPKAKRETASLAFA 186

Query: 194 SSFGFPRIAVAGAKPAFFAPRMRAKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWR 253
           SSFGFPRIAVAGAKPAFFAPRMR K+RGK+TFSLCEV+K RTHSILWAHRIK KA LSW+
Sbjct: 187 SSFGFPRIAVAGAKPAFFAPRMRQKVRGKSTFSLCEVQKGRTHSILWAHRIKGKAGLSWQ 246

Query: 254 SFRRQETLGLVGGAEPNESKPETDQGSLPAKPIGS-----------GPKDGACKVNRAPV 303
           SFRRQ+TLGLVG A   +SKP+TDQG+LPAKPIG              KDGACKV+RAPV
Sbjct: 247 SFRRQDTLGLVGAAGHKKSKPKTDQGNLPAKPIGERAKQLKALRGLRAKDGACKVDRAPV 306

[Close]

BLAST of Moc09g15560 vs. TAIR 10
Match: AT2G07715.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 437.6 bits (1124), Expect = 8.3e-123
Identity = 234/296 (79.05%), Postives = 249/296 (84.12%), Query Frame = 0


Query: 14  RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRS 73
           RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRL RRIDLKRSTSSMGIVE IEYDPNRS
Sbjct: 7   RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIEYDPNRS 66

Query: 74  SRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQRKVACFSP 133
           S+IAPVRWI+G  Q+K  TIE+FAPPRKILEPTT TI GLFSFS  PGKVD+RKVACFSP
Sbjct: 67  SQIAPVRWIKGGCQKKMNTIEKFAPPRKILEPTTNTISGLFSFSFLPGKVDKRKVACFSP 126

Query: 134 GLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFG 193
           GLMAAYVVVGLPT MPP S S     SKGAGS KT  KDVFFSAFSS K K ETASL+F 
Sbjct: 127 GLMAAYVVVGLPTGMPPLSSSKSAFASKGAGSTKTLVKDVFFSAFSSLKAKRETASLAFA 186

Query: 194 SSFGFPRIAVAGAKPAFFAPRMRAKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWR 253
           SSFGFPRIAVAGAKPAFFAPRMR K+RGK+TFSLCEV+K RTHSILWAHRIK KA LSW+
Sbjct: 187 SSFGFPRIAVAGAKPAFFAPRMRQKVRGKSTFSLCEVQKGRTHSILWAHRIKGKAGLSWQ 246

Query: 254 SFRRQETLGLVGGAEPNESKPETDQGSLPAKPIGS-----------GPKDGACKVN 299
           SFRRQ+TLGLVG A   +SKP+TDQG+LPAKPIG              KDGACKV+
Sbjct: 247 SFRRQDTLGLVGAAGHKKSKPKTDQGNLPAKPIGERAKQLKALRGLRAKDGACKVD 302

[Close]

BLAST of Moc09g15560 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-07
Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 28  GRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSM-GIVERIEYDPNRSSRIAPVRWIEGVR 87
           GRN+ G IT  HRGGG KRL R+ID +R+   + G +  IEYDPNR++ I  + + +G +
Sbjct: 40  GRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEK 99

[Close]

BLAST of Moc09g15560 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-07
Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 28  GRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSM-GIVERIEYDPNRSSRIAPVRWIEGVR 87
           GRN+ G IT  HRGGG KRL R+ID +R+   + G +  IEYDPNR++ I  + + +G +
Sbjct: 40  GRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEK 99

The following BLAST results are available for this feature:

BLAST of Moc09g15560 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009913619.1	5.2e-159	97.97	ribosomal protein L2 [Luffa acutangula] >QLJ93019.1 ribosomal protein L2 [Luffa ...	[more]
YP_003587229.1	2.4e-156	97.30	ribosomal protein L2 [Citrullus lanatus] >ACV96645.1 ribosomal protein L2 [Citru...	[more]
WP_131796642.1	8.8e-151	94.63	hypothetical protein [Candidatus Frankia datiscae]	[more]
YP_003587363.1	4.9e-149	93.92	ribosomal protein L2 [Cucurbita pepo] >ACV96687.1 ribosomal protein L2 [Cucurbit...	[more]
YP_009706786.1	9.2e-148	92.00	ribosomal protein L2 [Ilex pubescens] >QEP49780.1 ribosomal protein L2 [Ilex pub...	[more]

BLAST of Moc09g15560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93311	4.3e-124	79.33	60S ribosomal protein L2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL2 ...	[more]
P0C8K6	2.3e-85	58.41	60S ribosomal protein L2, mitochondrial OS=Oryza sativa OX=4530 GN=RPL2 PE=3 SV=...	[more]
Q2F969	2.3e-85	58.41	60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica OX=39946 G...	[more]
P92812	2.3e-85	58.41	60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947...	[more]
P26859	1.3e-32	44.88	60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL2...	[more]

BLAST of Moc09g15560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7D5XZ32	2.5e-159	97.97	Ribosomal protein L2 OS=Luffa acutangula OX=56866 GN=rpl2 PE=3 SV=1	[more]
D5I399	1.2e-156	97.30	Ribosomal protein L2 OS=Citrullus lanatus OX=3654 GN=rpl2 PE=3 SV=1	[more]
D5I3E9	2.3e-149	93.92	Ribosomal protein L2 OS=Cucurbita pepo OX=3663 GN=rpl2 PE=3 SV=1	[more]
A0A5C2I4L3	4.4e-148	92.00	Ribosomal protein L2 OS=Ilex pubescens OX=185543 GN=rpl2 PE=3 SV=1	[more]
G3EIZ1	1.3e-147	91.09	Ribosomal protein L2 OS=Cucumis sativus OX=3659 GN=rpl2 PE=3 SV=1	[more]

BLAST of Moc09g15560 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00560.1	3.1e-125	79.33	Nucleic acid-binding, OB-fold-like protein	[more]
AT2G07715.1	8.3e-123	79.05	Nucleic acid-binding, OB-fold-like protein	[more]
ATCG00830.1	1.2e-07	45.90	ribosomal protein L2	[more]
ATCG01310.1	1.2e-07	45.90	ribosomal protein L2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002171	Ribosomal protein L2	SMART	SM01383	Ribosomal_L2_2	coord: 28..104 e-value: 1.1E-18 score: 78.1
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 9..288
IPR022666	Ribosomal Proteins L2, RNA binding domain	PFAM	PF00181	Ribosomal_L2	coord: 28..80 e-value: 7.4E-14 score: 51.5
None	No IPR available	GENE3D	2.40.50.140		coord: 11..91 e-value: 3.4E-23 score: 83.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..303
None	No IPR available	PANTHER	PTHR13691:SF44	60S RIBOSOMAL PROTEIN L2, MITOCHONDRIAL-RELATED	coord: 9..288
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 7..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g15560.1	Moc09g15560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032543	mitochondrial translation
biological_process	GO:0006412	translation
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome