Moc09g15350 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g15350
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr9: 13000102 .. 13000898 (+)
RNA-Seq Expression	Moc09g15350
Synteny	Moc09g15350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGATTCCGGCGGCTTTTGCCACTTATGATCAGTGTTCACAAGAGCAAGACGGTTCAATGTCTTACAATGTTCAAGCAGCATTCTTGTCGGAAGGATTTTTTAGGAGGCCCGGACACCTACCGAACATCCCTGAAGGATGGAACAACATGATGAAGAAGCCACAAAGAAAGAAGAGGGAAGGTATGGAGGAAAATCTGGGAAGAGAACAAGGAGATCTCTGAAAAGGGAAGGCAAGGAAGTAGTAGTCGAAATGTTGAAGAGGAGACAACCCGCTCTTGAACTTAAGACTATGCGCGTCGCGTGCTCGATCTAGCAATCTTGGGCAATTGTTTTGATGAACTCTCACTAAACTAAAAAAGAAAGAAGAGAAAGAACTTGGAGTTGGCGCCTACATAACAGGTTGCTTGCTTACCAAGCCATCCTGGCAAGCTCCTCCAGTTCTATTATTATTCTTGACTTTACTTATTATTATAAAAACGACTCACTATCAAAATGAAAGACGATCGATTATCTACCCAAGAAGATAGAGAGTCCCACATACGAGAAAAGGTCACAAATAGAGTTAAACCAAGTAACATTGCAAAGGCATAATGATAGTAGGGTCGGGATATCCCCGCCCTCCGAACCGGACGTGAAGGTCTCCCCTCATCCGGCTCTCTGCAGGGGAATCTCCACTCACTGCTTCCCCTAATATCCTCCCTTTACCACATCATGGGGGTTTACAGGAGATCCCAGAGGCTCGCTCGGAAAGGCTGCTATACCATACCTTTTGACTCAACTCGACCGACTCTAG

mRNA sequence

ATGAGGATTCCGGCGGCTTTTGCCACTTATGATCAGTGTTCACAAGAGCAAGACGGTTCAATGTCTTACAATGTTCAAGCAGCATTCTTGTCGGAAGGATTTTTTAGGAGGCCCGGACACCTACCGAACATCCCTGAAGGATGGAACAACATGATGAAGAAGCCACAAAGAAAGAAGAGGGAAGGAGATCCCAGAGGCTCGCTCGGAAAGGCTGCTATACCATACCTTTTGACTCAACTCGACCGACTCTAG

Coding sequence (CDS)

ATGAGGATTCCGGCGGCTTTTGCCACTTATGATCAGTGTTCACAAGAGCAAGACGGTTCAATGTCTTACAATGTTCAAGCAGCATTCTTGTCGGAAGGATTTTTTAGGAGGCCCGGACACCTACCGAACATCCCTGAAGGATGGAACAACATGATGAAGAAGCCACAAAGAAAGAAGAGGGAAGGAGATCCCAGAGGCTCGCTCGGAAAGGCTGCTATACCATACCTTTTGACTCAACTCGACCGACTCTAG

Protein sequence

MRIPAAFATYDQCSQEQDGSMSYNVQAAFLSEGFFRRPGHLPNIPEGWNNMMKKPQRKKREGDPRGSLGKAAIPYLLTQLDRL

Homology

[Close]

BLAST of Moc09g15350 vs. NCBI nr
Match: KAB8477459.1 (hypothetical protein FH972_025325 [Carpinus fangiana])

HSP 1 Score: 119.8 bits (299), Expect = 1.1e-23
Identity = 54/62 (87.10%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1  MRIPAAFATYDQCSQEQDGSMSYNVQAAFLSEGFFRRPGHLPNIPEGWNNMMKKPQRKKR 60
          M+IPAAFATYDQCSQE+DGSMSYNVQAAFLSEGFFRRPGHLPNIPEGWNNMMKK +R++ 
Sbjct: 1  MKIPAAFATYDQCSQERDGSMSYNVQAAFLSEGFFRRPGHLPNIPEGWNNMMKKARRRRY 60

Query: 61 EG 63
           G
Sbjct: 61 GG 62

[Close]

BLAST of Moc09g15350 vs. NCBI nr
Match: KUM46807.1 (hypothetical protein ABT39_MTgene6262 [Picea glauca] >QHR92646.1 hypothetical protein Q903MT_gene6693 [Picea sitchensis])

HSP 1 Score: 118.2 bits (295), Expect = 3.3e-23
Identity = 53/62 (85.48%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1  MRIPAAFATYDQCSQEQDGSMSYNVQAAFLSEGFFRRPGHLPNIPEGWNNMMKKPQRKKR 60
          M+IPAAFATYDQCSQE+DGSMSYNV+AAFLSEGFFRRPGHLPNIPEGWNNMMKK +R++ 
Sbjct: 1  MKIPAAFATYDQCSQERDGSMSYNVKAAFLSEGFFRRPGHLPNIPEGWNNMMKKARRRRY 60

Query: 61 EG 63
           G
Sbjct: 61 GG 62

[Close]

BLAST of Moc09g15350 vs. NCBI nr
Match: KAF3452215.1 (hypothetical protein FNV43_RR08313 [Rhamnella rubrinervis])

HSP 1 Score: 118.2 bits (295), Expect = 3.3e-23
Identity = 61/91 (67.03%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 1  MRIPAAFATYDQCSQEQDGSMSYNVQAAFLSEGFFRRPGHLPNIPEGWNNMMKKPQ---- 60
          MRIPAAFATYDQCSQE+DGSMSYNVQAAFLSEGFFRRPGHLPNIPEGWNNMMKK      
Sbjct: 1  MRIPAAFATYDQCSQERDGSMSYNVQAAFLSEGFFRRPGHLPNIPEGWNNMMKKAAKGRD 60

Query: 61 ----RKKREGDPRGSLGKAAIPYLLTQLDRL 84
              R  REG P     +  +  LL  +  L
Sbjct: 61 IPALRTGREGLPSSGSPQGNLHSLLPLISSL 91

[Close]

BLAST of Moc09g15350 vs. NCBI nr
Match: DAD33755.1 (TPA_asm: hypothetical protein HUJ06_012606 [Nelumbo nucifera])

HSP 1 Score: 89.0 bits (219), Expect = 2.1e-14
Identity = 45/61 (73.77%), Postives = 47/61 (77.05%), Query Frame = 0


Query: 1  MRIPAAFATYDQCSQEQDGSMSYNVQAAFLSEGFFRRPGHLPNIPEGWNNMMKKPQRKKR 60
          MRIPAAFATYD CSQE DGSMSYNVQAAFLSEGF       PN PEGWNNMMKK  +  R
Sbjct: 18 MRIPAAFATYDMCSQEGDGSMSYNVQAAFLSEGFLGG----PNTPEGWNNMMKKAAKVWR 74

Query: 61 E 62
          +
Sbjct: 78 K 74

[Close]

BLAST of Moc09g15350 vs. NCBI nr
Match: VVA31290.1 (PREDICTED: ABT39_MTgene6262 [Prunus dulcis])

HSP 1 Score: 62.4 bits (150), Expect = 2.1e-06
Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 1  MRIPAAFATYDQCSQEQDGSMSYNVQAAFLSEGFFRRPGHLPNIPEGWNNMMKKPQRKKR 60
          M IPAAF+T+DQCSQE+DGS+SY VQAA     FFRR G L  +   WN   +K + + +
Sbjct: 1  MSIPAAFSTHDQCSQERDGSISYKVQAASCPNDFFRRLGQL--LKSLWNIRSRK-RYEGK 60

Query: 61 EGDPRGSLGKAA 73
           G   GSL + A
Sbjct: 61 SGMRTGSLKRGA 69

[Close]

BLAST of Moc09g15350 vs. ExPASy TrEMBL
Match: A0A5N6L0T7 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_025325 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.5e-24
Identity = 54/62 (87.10%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1  MRIPAAFATYDQCSQEQDGSMSYNVQAAFLSEGFFRRPGHLPNIPEGWNNMMKKPQRKKR 60
          M+IPAAFATYDQCSQE+DGSMSYNVQAAFLSEGFFRRPGHLPNIPEGWNNMMKK +R++ 
Sbjct: 1  MKIPAAFATYDQCSQERDGSMSYNVQAAFLSEGFFRRPGHLPNIPEGWNNMMKKARRRRY 60

Query: 61 EG 63
           G
Sbjct: 61 GG 62

[Close]

BLAST of Moc09g15350 vs. ExPASy TrEMBL
Match: A0A124GMV0 (Uncharacterized protein OS=Picea glauca OX=3330 GN=ABT39_MTgene6262 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23
Identity = 53/62 (85.48%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1  MRIPAAFATYDQCSQEQDGSMSYNVQAAFLSEGFFRRPGHLPNIPEGWNNMMKKPQRKKR 60
          M+IPAAFATYDQCSQE+DGSMSYNV+AAFLSEGFFRRPGHLPNIPEGWNNMMKK +R++ 
Sbjct: 1  MKIPAAFATYDQCSQERDGSMSYNVKAAFLSEGFFRRPGHLPNIPEGWNNMMKKARRRRY 60

Query: 61 EG 63
           G
Sbjct: 61 GG 62

[Close]

BLAST of Moc09g15350 vs. ExPASy TrEMBL
Match: A0A6B9XUR5 (Uncharacterized protein OS=Picea sitchensis OX=3332 GN=orf06748 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23
Identity = 53/62 (85.48%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1  MRIPAAFATYDQCSQEQDGSMSYNVQAAFLSEGFFRRPGHLPNIPEGWNNMMKKPQRKKR 60
          M+IPAAFATYDQCSQE+DGSMSYNV+AAFLSEGFFRRPGHLPNIPEGWNNMMKK +R++ 
Sbjct: 1  MKIPAAFATYDQCSQERDGSMSYNVKAAFLSEGFFRRPGHLPNIPEGWNNMMKKARRRRY 60

Query: 61 EG 63
           G
Sbjct: 61 GG 62

[Close]

BLAST of Moc09g15350 vs. ExPASy TrEMBL
Match: A0A5E4FVF8 (PREDICTED: ABT39_MTgene6262 (Mitochondrion) OS=Prunus dulcis OX=3755 GN=ALMOND_2B031357 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06
Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 1  MRIPAAFATYDQCSQEQDGSMSYNVQAAFLSEGFFRRPGHLPNIPEGWNNMMKKPQRKKR 60
          M IPAAF+T+DQCSQE+DGS+SY VQAA     FFRR G L  +   WN   +K + + +
Sbjct: 1  MSIPAAFSTHDQCSQERDGSISYKVQAASCPNDFFRRLGQL--LKSLWNIRSRK-RYEGK 60

Query: 61 EGDPRGSLGKAA 73
           G   GSL + A
Sbjct: 61 SGMRTGSLKRGA 69

The following BLAST results are available for this feature:

BLAST of Moc09g15350 vs. NCBI nr


Match Name	E-value	Identity	Description
KAB8477459.1	1.1e-23	87.10	hypothetical protein FH972_025325 [Carpinus fangiana]	[more]
KUM46807.1	3.3e-23	85.48	hypothetical protein ABT39_MTgene6262 [Picea glauca] >QHR92646.1 hypothetical pr...	[more]
KAF3452215.1	3.3e-23	67.03	hypothetical protein FNV43_RR08313 [Rhamnella rubrinervis]	[more]
DAD33755.1	2.1e-14	73.77	TPA_asm: hypothetical protein HUJ06_012606 [Nelumbo nucifera]	[more]
VVA31290.1	2.1e-06	50.00	PREDICTED: ABT39_MTgene6262 [Prunus dulcis]	[more]

BLAST of Moc09g15350 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc09g15350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5N6L0T7	5.5e-24	87.10	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_025325 PE=4 SV=1	[more]
A0A124GMV0	1.6e-23	85.48	Uncharacterized protein OS=Picea glauca OX=3330 GN=ABT39_MTgene6262 PE=4 SV=1	[more]
A0A6B9XUR5	1.6e-23	85.48	Uncharacterized protein OS=Picea sitchensis OX=3332 GN=orf06748 PE=4 SV=1	[more]
A0A5E4FVF8	1.0e-06	50.00	PREDICTED: ABT39_MTgene6262 (Mitochondrion) OS=Prunus dulcis OX=3755 GN=ALMOND_2...	[more]

BLAST of Moc09g15350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g15350.1	Moc09g15350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion