Moc09g15220 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g15220
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr9: 12962669 .. 12964667 (+)
RNA-Seq Expression	Moc09g15220
Synteny	Moc09g15220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTAGCAGTGCCTGCTGGAACCCCAGAGTCTTTATTTGATCCAGGATTGGTGATGTATATGCCATTCCGAAGTGATCGAAAATCTGCTAATAAGTCGTTTAATGGCAGTTCCATCTATCACTTTATTGTGAAAGACCAATCGCCCCGTTCCCCATAAGTACCCCCTCCATATTACGCCTGAGTGGGGTTGTGTAATAGTCGTTTCTCCTCGGTTTTATTAGGTTTTGGAATCCTAGATCGGTGCATAGGAGAGAATTGAAAGGTCCCATCTACTAAAGGGAATTCTCTCCTCCCGTTCCTTTCCTGACTTCGGGTTTGATATTAGGTTTCTCTCCCACAGAAAAGGGAGATGTTACTAAGCTTTTGGGCAGTCCGTTTCTTTTAGCGAGAGGAATTCCTCACGTAACAAGGTAATAACCGATTTGCTGTTAGATTGGACCATTGTTCCTCCTTTTCTATATGTCCTATATTAGGTGGGAGTACACACCGAATGTTGCATTAAACCAATGTTTATCGAAGTTAACGTGTACGCGAATGCTCGCTTCCTTACTTCAGTCCGAGGATCCTCGATATGTTGATCCCCTATCAGCTCATGATATTCTTTCAGTATGTTTCTTGGTCAGAGTGATATATATCCTCCGGGCAACGAAGCATATTAGGGCTATCGAGTTGGGTTTCTTTCACAGCATTGCAGCTTTGTTGGGATGTTGGACGGCGGTCGGGTCCACTTCGAGAATGGCTTGGGTACCAGTGCCCCAAAAAAAAAGCACCTACTACAAGGGACATGGTGAGCATAAGATCGAGGGAGCTCTTATAAGCGAGTGAATAAGGTCCGAACCCAATTGAAACATATCCGCTAAACCCTCGATCAGTATTTCTCGAAAGATCCTTCTAGCTCGCGCTGCACTAGGTAGACCCGCCAAATCTTCCCGATTTGAAGGGCCGCTTTGGCTGACCCGAGGTTAAAGAATCCATAGGCCAAGGTTGTATATGTTTTCCACTCTCTCCTCAGGATGGAATCTTTTTTAGACCCTCTCGTTCATGATCGAATAAGATAGTTGTCGTCCTTTGAATTTCCCACGTTCTAGTGGACCTGCTTTAAATACATTTAAGGTTGTTGTACGTTCTTTGCTTACACCAGAAGAAGAGGAAACCCACTCTCTTCTTTCTTCTTTTTTAGAACCGTCGAAGGCCTTGAGACATATAACAATTATGTTATGAAACTTGTTCGTTAAGAATTTTTTGGATCTCGTTAGATACAAATTGTCGAGCCCAACCAAAAAAGATGGGGCTCGGTATAGCCACAGTCCGGTTCCCAGGGTTAGAGTATTCCCTATTAGAAGCCTACTCAAATCAGAACTAAACTAGTAGATTCTCTTTCGCTTATCGGCCGGCCGGCTTTCATTGTTGCTGCAAACCTTCGCATTTCCTGCTGAGATCCCAGTCTCCAAGTGGGCCCTCTTGGCCACCCGCGACCTTGGCTTTTTAGAGAATCCCGCTCCTGTGTCGTGGGACTTGTAGCTCGGCAGTCCACCGGTGGGTTTGTTTATCCTTCCAGTTTCGATTGTCTTCTTGGATAGTTATATAGCGGCCCATAGGCGCAAGATGTACCTTGTGGTGGGGGGGGGCGGCGGTCCCCTGGACATAGTCCTTTTTCAGGCAGTGGCCGTTTAGTCCATGGTCCATTAGATGGTCGGTGCAAGGCCAGAAATTTGAACACATTGATTCCGCTCGTTCCCGTCCTTCGCTTCAGGGCCTGTCCCTCGGTGTGGTCAGTACTCCATACTGTCGGGCAGCGAAGCTTACACTTGTTCACTAATTATGACGGTTCGCCAGGGCCCTCTTTCCTCCTCCCTTTTCTGCTCACTCGTAGGGTCCGGACCCCCACAAAGGGGAGGGAGTCGACTGAACATCTCAGCCATTGGCGGGAATTTCGCCCGCATCCGATCCCCAAATTCTTGTTCACCCCCGATGATCGTGTTGGTGAATTGTGA

mRNA sequence

ATGGATGTAGCAGTGCCTGCTGGAACCCCAGAGTCTTTATTTGATCCAGGATTGGTGATGTATATGCCATTCCGAAGTGATCGAAAATCTGCTAATAAGTCGTTTAATGGCAGTTCCATCTATCACTTTATTGTGAAAGACCAATCGCCCCGTTTCTCTCCCACAGAAAAGGGAGATGTTACTAAGCTTTTGGGCAGTCCGTTTCTTTTAGCGAGAGGAATTCCTCACGTAACAAGGTGGGAGTACACACCGAATGTTGCATTAAACCAATGTTTATCGAAGTTAACGTGTACGCGAATGCTCGCTTCCTTACTTCAGTCCGAGGATCCTCGATATGTTGATCCCCTATCAGCTCATGATATTCTTTCACTTTGTTGGGATGTTGGACGGCGGTCGGGTCCACTTCGAGAATGGCTTGGGTACCAGTGCCCCAAAAAAAAAGCACCTACTACAAGGGACATGGCGCAAGATGTACCTTGTGGTGGGGGGGGGCGGCGGTCCCCTGGACATAGTCCTTTTTCAGGCAGTGGCCGTTTAGTCCATGGTCCATTAGATGGTCGGTGCAAGGCCAGAAATTTGAACACATTGATTCCGCTCGTTCCCGTCCTTCGCTTCAGGGCCTGTCCCTCGGTGTGGTCAGTACTCCATACTGTCGGGCAGCGAAGCTTACACTTGTTCACTAATTATGACGGTTCGCCAGGGCCCTCTTTCCTCCTCCCTTTTCTGCTCACTCGTAGGGTCCGGACCCCCACAAAGGGGAGGGAGTCGACTGAACATCTCAGCCATTGGCGGGAATTTCGCCCGCATCCGATCCCCAAATTCTTGTTCACCCCCGATGATCGTGTTGGTGAATTGTGA

Coding sequence (CDS)

ATGGATGTAGCAGTGCCTGCTGGAACCCCAGAGTCTTTATTTGATCCAGGATTGGTGATGTATATGCCATTCCGAAGTGATCGAAAATCTGCTAATAAGTCGTTTAATGGCAGTTCCATCTATCACTTTATTGTGAAAGACCAATCGCCCCGTTTCTCTCCCACAGAAAAGGGAGATGTTACTAAGCTTTTGGGCAGTCCGTTTCTTTTAGCGAGAGGAATTCCTCACGTAACAAGGTGGGAGTACACACCGAATGTTGCATTAAACCAATGTTTATCGAAGTTAACGTGTACGCGAATGCTCGCTTCCTTACTTCAGTCCGAGGATCCTCGATATGTTGATCCCCTATCAGCTCATGATATTCTTTCACTTTGTTGGGATGTTGGACGGCGGTCGGGTCCACTTCGAGAATGGCTTGGGTACCAGTGCCCCAAAAAAAAAGCACCTACTACAAGGGACATGGCGCAAGATGTACCTTGTGGTGGGGGGGGGCGGCGGTCCCCTGGACATAGTCCTTTTTCAGGCAGTGGCCGTTTAGTCCATGGTCCATTAGATGGTCGGTGCAAGGCCAGAAATTTGAACACATTGATTCCGCTCGTTCCCGTCCTTCGCTTCAGGGCCTGTCCCTCGGTGTGGTCAGTACTCCATACTGTCGGGCAGCGAAGCTTACACTTGTTCACTAATTATGACGGTTCGCCAGGGCCCTCTTTCCTCCTCCCTTTTCTGCTCACTCGTAGGGTCCGGACCCCCACAAAGGGGAGGGAGTCGACTGAACATCTCAGCCATTGGCGGGAATTTCGCCCGCATCCGATCCCCAAATTCTTGTTCACCCCCGATGATCGTGTTGGTGAATTGTGA

Protein sequence

MDVAVPAGTPESLFDPGLVMYMPFRSDRKSANKSFNGSSIYHFIVKDQSPRFSPTEKGDVTKLLGSPFLLARGIPHVTRWEYTPNVALNQCLSKLTCTRMLASLLQSEDPRYVDPLSAHDILSLCWDVGRRSGPLREWLGYQCPKKKAPTTRDMAQDVPCGGGGRRSPGHSPFSGSGRLVHGPLDGRCKARNLNTLIPLVPVLRFRACPSVWSVLHTVGQRSLHLFTNYDGSPGPSFLLPFLLTRRVRTPTKGRESTEHLSHWREFRPHPIPKFLFTPDDRVGEL

Homology

[Close]

BLAST of Moc09g15220 vs. NCBI nr
Match: PWA35870.1 (hypothetical protein CTI12_AA605510 [Artemisia annua] >PWA62949.1 hypothetical protein CTI12_AA359360 [Artemisia annua] >PWA67536.1 hypothetical protein CTI12_AA303740 [Artemisia annua] >PWA70696.1 hypothetical protein CTI12_AA286990 [Artemisia annua])

HSP 1 Score: 183.3 bits (464), Expect = 2.9e-42
Identity = 86/99 (86.87%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 174 SGSGRLVHGPLDGRCKARNLNTLIPLVPVLRFRACPSVWSVLHTVGQRSLHLFTNYDGSP 233
           SGSGRLVHGPLDGRCKARN NTLIPLVPVLRFRACPSVWSVLHTVGQRSLHLFTNYDGSP
Sbjct: 6   SGSGRLVHGPLDGRCKARNWNTLIPLVPVLRFRACPSVWSVLHTVGQRSLHLFTNYDGSP 65

Query: 234 GPSFLLPFLLTRRVRTPTKGRESTEHLSHWREFRPHPIP 273
           GP     F     VRTP +GRESTEHLSHWREFRPHPIP
Sbjct: 66  GPLSSSLFCSLVGVRTPQRGRESTEHLSHWREFRPHPIP 104

[Close]

BLAST of Moc09g15220 vs. NCBI nr
Match: KAF3976730.1 (hypothetical protein CMV_000128 [Castanea mollissima])

HSP 1 Score: 145.6 bits (366), Expect = 6.6e-31
Identity = 75/97 (77.32%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 157 DVPCGGGGRRSPGHSPFSGSGRLVHGPLDGRCKARNLNTLIPLVPVLRFRACPSVWSVLH 216
           D+  GGGG   P     SGSGRLVHGPLDGRCKARN NTLIPLVPVLRFRACPSVWSVLH
Sbjct: 6   DLVGGGGG---PLDIVLSGSGRLVHGPLDGRCKARNWNTLIPLVPVLRFRACPSVWSVLH 65

Query: 217 TVGQRSLHLFTNYDGSPGPSFLLPFLLTRRVRTPTKG 254
           TVGQRSLHLFTNYDGSPGP     F     VRTPTKG
Sbjct: 66  TVGQRSLHLFTNYDGSPGPLSSSLFCSLVGVRTPTKG 99

[Close]

BLAST of Moc09g15220 vs. NCBI nr
Match: KAG6621685.1 (hypothetical protein I3842_Q010100 [Carya illinoinensis])

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-30
Identity = 74/93 (79.57%), Postives = 74/93 (79.57%), Query Frame = 0


Query: 161 GGGGRRSPGHSPFSGSGRLVHGPLDGRCKARNLNTLIPLVPVLRFRACPSVWSVLHTVGQ 220
           GGGG   P     SGSGRLVHGPLDGRCKARN NTLIPLVPVLRFRACPSVWSVLHTVGQ
Sbjct: 5   GGGG--GPLDIVLSGSGRLVHGPLDGRCKARNWNTLIPLVPVLRFRACPSVWSVLHTVGQ 64

Query: 221 RSLHLFTNYDGSPGPSFLLPFLLTRRVRTPTKG 254
           RSLHLFTNYDGSPGP     F     VRTPTKG
Sbjct: 65  RSLHLFTNYDGSPGPLSSSLFCSLVGVRTPTKG 95

[Close]

BLAST of Moc09g15220 vs. NCBI nr
Match: CAD1835888.1 (unnamed protein product [Ananas comosus var. bracteatus])

HSP 1 Score: 139.0 bits (349), Expect = 6.2e-29
Identity = 72/93 (77.42%), Postives = 72/93 (77.42%), Query Frame = 0


Query: 161 GGGGRRSPGHSPFSGSGRLVHGPLDGRCKARNLNTLIPLVPVLRFRACPSVWSVLHTVGQ 220
           GGGG   P     SGSGRLVHGPLD RCKARN NTLIPLVPVLRFRACPSVWSVLHTVGQ
Sbjct: 63  GGGG---PLDIVLSGSGRLVHGPLDSRCKARNWNTLIPLVPVLRFRACPSVWSVLHTVGQ 122

Query: 221 RSLHLFTNYDGSPGPSFLLPFLLTRRVRTPTKG 254
           RSLHLFT YDGSPGP     F     VRTPTKG
Sbjct: 123 RSLHLFTYYDGSPGPLSSSLFCSLVGVRTPTKG 152

[Close]

BLAST of Moc09g15220 vs. NCBI nr
Match: RCU61519.1 (hypothetical protein SETIT_J009100v2, partial [Setaria italica])

HSP 1 Score: 137.1 bits (344), Expect = 2.3e-28
Identity = 66/80 (82.50%), Postives = 68/80 (85.00%), Query Frame = 0


Query: 174 SGSGRLVHGPLDGRCKARNLNTLIPLVPVLRFRACPSVWSVLHTVGQRSLHLFTNYDGSP 233
           SGSGRLVHGPLDGRCKARN NTLIPLVPVLRFRACPSVWSVLHTVGQ+SLHLFT YDGSP
Sbjct: 4   SGSGRLVHGPLDGRCKARNWNTLIPLVPVLRFRACPSVWSVLHTVGQQSLHLFTYYDGSP 63

Query: 234 GPSFLLPFLLTRRVRTPTKG 254
           GP     F     V+TPTKG
Sbjct: 64  GPLSSSLFCSLVGVQTPTKG 83

[Close]

BLAST of Moc09g15220 vs. ExPASy TrEMBL
Match: A0A2U1MNX4 (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA286990 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-42
Identity = 86/99 (86.87%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 174 SGSGRLVHGPLDGRCKARNLNTLIPLVPVLRFRACPSVWSVLHTVGQRSLHLFTNYDGSP 233
           SGSGRLVHGPLDGRCKARN NTLIPLVPVLRFRACPSVWSVLHTVGQRSLHLFTNYDGSP
Sbjct: 6   SGSGRLVHGPLDGRCKARNWNTLIPLVPVLRFRACPSVWSVLHTVGQRSLHLFTNYDGSP 65

Query: 234 GPSFLLPFLLTRRVRTPTKGRESTEHLSHWREFRPHPIP 273
           GP     F     VRTP +GRESTEHLSHWREFRPHPIP
Sbjct: 66  GPLSSSLFCSLVGVRTPQRGRESTEHLSHWREFRPHPIP 104

[Close]

BLAST of Moc09g15220 vs. ExPASy TrEMBL
Match: A0A6V7PYV7 (Uncharacterized protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS19099 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.0e-29
Identity = 72/93 (77.42%), Postives = 72/93 (77.42%), Query Frame = 0


Query: 161 GGGGRRSPGHSPFSGSGRLVHGPLDGRCKARNLNTLIPLVPVLRFRACPSVWSVLHTVGQ 220
           GGGG   P     SGSGRLVHGPLD RCKARN NTLIPLVPVLRFRACPSVWSVLHTVGQ
Sbjct: 63  GGGG---PLDIVLSGSGRLVHGPLDSRCKARNWNTLIPLVPVLRFRACPSVWSVLHTVGQ 122

Query: 221 RSLHLFTNYDGSPGPSFLLPFLLTRRVRTPTKG 254
           RSLHLFT YDGSPGP     F     VRTPTKG
Sbjct: 123 RSLHLFTYYDGSPGPLSSSLFCSLVGVRTPTKG 152

[Close]

BLAST of Moc09g15220 vs. ExPASy TrEMBL
Match: A0A368PE77 (Uncharacterized protein (Fragment) OS=Setaria italica OX=4555 GN=SETIT_J009100v2 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.1e-28
Identity = 66/80 (82.50%), Postives = 68/80 (85.00%), Query Frame = 0


Query: 174 SGSGRLVHGPLDGRCKARNLNTLIPLVPVLRFRACPSVWSVLHTVGQRSLHLFTNYDGSP 233
           SGSGRLVHGPLDGRCKARN NTLIPLVPVLRFRACPSVWSVLHTVGQ+SLHLFT YDGSP
Sbjct: 4   SGSGRLVHGPLDGRCKARNWNTLIPLVPVLRFRACPSVWSVLHTVGQQSLHLFTYYDGSP 63

Query: 234 GPSFLLPFLLTRRVRTPTKG 254
           GP     F     V+TPTKG
Sbjct: 64  GPLSSSLFCSLVGVQTPTKG 83

[Close]

BLAST of Moc09g15220 vs. ExPASy TrEMBL
Match: A0A1Y0B153 (Uncharacterized protein OS=Utricularia reniformis OX=192314 GN=AEK19_MT0886 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 7.4e-28
Identity = 70/93 (75.27%), Postives = 72/93 (77.42%), Query Frame = 0


Query: 161 GGGGRRSPGHSPFSGSGRLVHGPLDGRCKARNLNTLIPLVPVLRFRACPSVWSVLHTVGQ 220
           GGGG   P     SGSGRLVHGPLDGRCKARN NTLIPLVPVLRFRACPSVWSVL+TVGQ
Sbjct: 80  GGGG---PLDIVLSGSGRLVHGPLDGRCKARNWNTLIPLVPVLRFRACPSVWSVLNTVGQ 139

Query: 221 RSLHLFTNYDGSPGPSFLLPFLLTRRVRTPTKG 254
           RSLHLF + DGSPGP     F     VRTPTKG
Sbjct: 140 RSLHLFKHVDGSPGPLSSSLFCSLVGVRTPTKG 169

[Close]

BLAST of Moc09g15220 vs. ExPASy TrEMBL
Match: A0A0L9TUY9 (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g055800 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.6e-27
Identity = 69/93 (74.19%), Postives = 70/93 (75.27%), Query Frame = 0


Query: 161 GGGGRRSPGHSPFSGSGRLVHGPLDGRCKARNLNTLIPLVPVLRFRACPSVWSVLHTVGQ 220
           GGGG   P     SGSGRLVHGPLDGRCKARN NTLIPLVPVLRFRACPSVWSVLHTVGQ
Sbjct: 289 GGGG---PRDIVLSGSGRLVHGPLDGRCKARNWNTLIPLVPVLRFRACPSVWSVLHTVGQ 348

Query: 221 RSLHLFTNYDGSPGPSFLLPFLLTRRVRTPTKG 254
           RSLHL T+YDGSPGP     F    R   P KG
Sbjct: 349 RSLHLLTHYDGSPGPLSSSLFCSLVRGPDPHKG 378

The following BLAST results are available for this feature:

BLAST of Moc09g15220 vs. NCBI nr


Match Name	E-value	Identity	Description
PWA35870.1	2.9e-42	86.87	hypothetical protein CTI12_AA605510 [Artemisia annua] >PWA62949.1 hypothetical p...	[more]
KAF3976730.1	6.6e-31	77.32	hypothetical protein CMV_000128 [Castanea mollissima]	[more]
KAG6621685.1	1.1e-30	79.57	hypothetical protein I3842_Q010100 [Carya illinoinensis]	[more]
CAD1835888.1	6.2e-29	77.42	unnamed protein product [Ananas comosus var. bracteatus]	[more]
RCU61519.1	2.3e-28	82.50	hypothetical protein SETIT_J009100v2, partial [Setaria italica]	[more]

BLAST of Moc09g15220 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc09g15220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2U1MNX4	1.4e-42	86.87	Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA286990 PE=4 SV=1	[more]
A0A6V7PYV7	3.0e-29	77.42	Uncharacterized protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS...	[more]
A0A368PE77	1.1e-28	82.50	Uncharacterized protein (Fragment) OS=Setaria italica OX=4555 GN=SETIT_J009100v2...	[more]
A0A1Y0B153	7.4e-28	75.27	Uncharacterized protein OS=Utricularia reniformis OX=192314 GN=AEK19_MT0886 PE=4...	[more]
A0A0L9TUY9	1.6e-27	74.19	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g055800 PE...	[more]

BLAST of Moc09g15220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g15220.1	Moc09g15220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion