Moc09g14600 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g14600
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionkirola-like
Locationchr9: 12575802 .. 12577291 (+)
RNA-Seq ExpressionMoc09g14600
SyntenyMoc09g14600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGTTGCTTTAACACAGCAGCTAGCAGTCAGAGATGCAGAGCTCAAGGGCATGATTGAAAAGCTTGCCCGTTCGGGTGCCTCAAGCTCTTTAGTGCAGCATCGGTCTTAGATTCTCTGCTAGAGCACAACTCGAACAACATAACTCAACGATATCTTGAACAAATTAGAAAGGATGAGTGTCAAGATTGAGGAAGAAGTGAAGGCTATAAGGTTGTTGACATCTTTGTCTGACAGTTGGGAGACGATGAAGACCGCGGTGACGAATTCGCTAGGAGAAAATAGCTTGAAATTTTCAGCTATTTGTGATGCCGCCTTATATGAGGAAGCTCGGAGAAAATTAGGGAAAATGTCTACAACTACTTCAGGGGCATAAAATGAGATTGAATCAGCTTTGGTAGCTCAGTTAAAGGGGAAGGGCAAGATGAAGTACAACGGGAAGCAGGAACATAGGAATAACAGGGTAGTGGGAGTTCCAGTGGAGAAGTTGAATGTTTTTACTGCCATAAGAAGGGTCACTTCAAGAAACACTGCAGGAAGCTTCATGAGGATCAGGAAAATGATGACACTTTAAATTACGTATCAGCAGAGGTGTTAGCTTGTATTGAAGGTAACACAACACCTGTAGACCGGTCATCAGAGTGGGTAGTGGACAGTGCAGCTTCGGTGCATGTAGCTTCAGACAGGAGTTGGTTCACATCCTTTACTGTAGGAAAGCATGACACTGTGAGGATGAGAAATGAAAGACTTTCCAAGATCATAGGAATTGGGGATGTTCGTCTAAGGACTGCCAGTGGGACCGAGTTAGTTTTGCATGGTGTCAGGTATATACCCAGTTTAAGGATGAATTTGATATCAGTGGGGAAGCTGGATGACGAAGTTTACAAAAGTGAGTTTGCAGATAATAGATGGAAACTCATGAAGGGATCCGAGATAGTGGTTGTTGGCAACAAAAAAGCTTCAGTGTATGTGTTGAGGTTAAATGTTGCCAAAGGATCAGAGAGACAAGCTATGCACAGGGCTGCAGATAGTCCAGGAGGAGACTTGAAAGAACTAGCAGCATTGACAGTCCACTAGTGGCGAAGAAAATTTCTACCATCCCACCCAAAAACAACTCGGAGCCTAAACTAAAGAGAAGAGAGTTCAGTCTACAAGAAGCTGGCAGAGCTTTAGCCATTGGATCAGAAGAATCTGCCATTAGTTCAAGTATAACAGTTGGGAAGTAGAGGAAAGGGAAAGATGAACAACTCATTGAGGCGTTCAACAGACTGTTAGTTTCAAGCCCCAATTGTCAGACAGATTAGCGAGTTGATGAAGTTGCGTAGGCGAAAAGGTGCATTGAGAAAGACTACAGTTGGTGCTGAGGTCGATGGTGAAGTCTCTATAGTGGCAACGGACTTGGGTGGGAATGCCAAGTCATCAGTGAAAAAGCTTTCCTTCAAGAGTCGTTGGGTGAGAGTGAAGAAGGAAGTATCTGGGACCACTTAG

mRNA sequence

ATGGTTGTTGCTTTAACACAGCAGCTAGCAGTCAGAGATGCAGAGCTCAAGGGCATGATTGAAAAGCTTGCCCGTTCGGGTGCCTCAAGCTCTTTAGTGCAGCATCGTTGGGAGACGATGAAGACCGCGGTGACGAATTCGCTAGGAGAAAATAGCTTGAAATTTTCAGCTATTTGTGATGCCGCCTTATATGAGGAAGCTCGGAGAAAATTAGGGAAAATGAAGCTTCATGAGGATCAGGAAAATGATGACACTTTAAATTACGTATCAGCAGAGGGATCCGAGATAGTGGTTGTTGGCAACAAAAAAGCTTCAGTGTATGTGTTGAGGTTAAATGTTGCCAAAGGATCAGAGAGACAAGCTATGCACAGGGCTGCAGATAGTCCAGGAGGAGACTTGAAAGAACTAGCAGCATTGACAATTAGCGAGTTGATGAAGTTGCGTAGGCGAAAAGGTGCATTGAGAAAGACTACAGTTGGTGCTGAGGTCGATGGTGAAGTCTCTATAGTGGCAACGGACTTGGGTGGGAATGCCAAGTCATCAGTGAAAAAGCTTTCCTTCAAGAGTCGTTGGGTGAGAGTGAAGAAGGAAGTATCTGGGACCACTTAG

Coding sequence (CDS)

ATGGTTGTTGCTTTAACACAGCAGCTAGCAGTCAGAGATGCAGAGCTCAAGGGCATGATTGAAAAGCTTGCCCGTTCGGGTGCCTCAAGCTCTTTAGTGCAGCATCGTTGGGAGACGATGAAGACCGCGGTGACGAATTCGCTAGGAGAAAATAGCTTGAAATTTTCAGCTATTTGTGATGCCGCCTTATATGAGGAAGCTCGGAGAAAATTAGGGAAAATGAAGCTTCATGAGGATCAGGAAAATGATGACACTTTAAATTACGTATCAGCAGAGGGATCCGAGATAGTGGTTGTTGGCAACAAAAAAGCTTCAGTGTATGTGTTGAGGTTAAATGTTGCCAAAGGATCAGAGAGACAAGCTATGCACAGGGCTGCAGATAGTCCAGGAGGAGACTTGAAAGAACTAGCAGCATTGACAATTAGCGAGTTGATGAAGTTGCGTAGGCGAAAAGGTGCATTGAGAAAGACTACAGTTGGTGCTGAGGTCGATGGTGAAGTCTCTATAGTGGCAACGGACTTGGGTGGGAATGCCAAGTCATCAGTGAAAAAGCTTTCCTTCAAGAGTCGTTGGGTGAGAGTGAAGAAGGAAGTATCTGGGACCACTTAG

Protein sequence

MVVALTQQLAVRDAELKGMIEKLARSGASSSLVQHRWETMKTAVTNSLGENSLKFSAICDAALYEEARRKLGKMKLHEDQENDDTLNYVSAEGSEIVVVGNKKASVYVLRLNVAKGSERQAMHRAADSPGGDLKELAALTISELMKLRRRKGALRKTTVGAEVDGEVSIVATDLGGNAKSSVKKLSFKSRWVRVKKEVSGTT
Homology
[Close]
BLAST of Moc09g14600 vs. NCBI nr
Match: XP_022138046.1 (kirola-like [Momordica charantia])

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-05
Identity = 55/145 (37.93%), Postives = 67/145 (46.21%), Query Frame = 0 

Query: 40  MKTAVTNSLGENSLKFSAICDAALYEEARRK-LGKMKLHEDQENDDTLNYVSAEGSEIVV 99
           MKTAV+NSLG+ SLKFS ICDAA+ EE RRK  GK              Y S +GS + V
Sbjct: 1   MKTAVSNSLGDKSLKFSEICDAAIAEEIRRKRSGK-------------EYTSLQGSALAV 60

Query: 100 VGNKKASVYVLRLNVAKGSERQAMHRAADSPGGDLKELAALTISELMKLRRRKGALRK-T 159
              K+         VA    R                     + ELMK R++  A  K  
Sbjct: 61  EKGKE--------KVASDDRR---------------------MGELMKSRQQTVASEKMN 103

Query: 160 TVGAEVDGEVSIVATDLGGNAKSSV 183
            VG EV+  VSI+A DL    KS+V
Sbjct: 121 PVGTEVNNGVSILAVDLNTVVKSTV 103

[Close]
BLAST of Moc09g14600 vs. ExPASy TrEMBL
Match: A0A6J1C8L4 (kirola-like OS=Momordica charantia OX=3673 GN=LOC111009302 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 9.6e-06
Identity = 55/145 (37.93%), Postives = 67/145 (46.21%), Query Frame = 0 

Query: 40  MKTAVTNSLGENSLKFSAICDAALYEEARRK-LGKMKLHEDQENDDTLNYVSAEGSEIVV 99
           MKTAV+NSLG+ SLKFS ICDAA+ EE RRK  GK              Y S +GS + V
Sbjct: 1   MKTAVSNSLGDKSLKFSEICDAAIAEEIRRKRSGK-------------EYTSLQGSALAV 60

Query: 100 VGNKKASVYVLRLNVAKGSERQAMHRAADSPGGDLKELAALTISELMKLRRRKGALRK-T 159
              K+         VA    R                     + ELMK R++  A  K  
Sbjct: 61  EKGKE--------KVASDDRR---------------------MGELMKSRQQTVASEKMN 103

Query: 160 TVGAEVDGEVSIVATDLGGNAKSSV 183
            VG EV+  VSI+A DL    KS+V
Sbjct: 121 PVGTEVNNGVSILAVDLNTVVKSTV 103

The following BLAST results are available for this feature:
BLAST of Moc09g14600 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022138046.12.0e-0537.93kirola-like [Momordica charantia][more]
BLAST of Moc09g14600 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc09g14600 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C8L49.6e-0637.93kirola-like OS=Momordica charantia OX=3673 GN=LOC111009302 PE=3 SV=1[more]
BLAST of Moc09g14600 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g14600.1Moc09g14600.1mRNA