Moc09g13320 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g13320
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Gag-Pol polyprotein
Location	chr9: 11297198 .. 11301853 (+)
RNA-Seq Expression	Moc09g13320
Synteny	Moc09g13320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGTAAAGTACGATATTGAGAAATTCAATGGGACTAATTCCTCGTTGTGGAAGATGAAGATGAAGGCTATCTTGAGAAAAGATAATTGCTTTGCAGCCATCAGTGTGAGGCTGGTAGATGTCACAGATGATAAGTGGAATGAGATAAACGGGAATGTTGTTGCAAATATTCATCTGGCTCTAGCAGATAAAGTGTTGTCAAGCATAGAGGAGAAGAAAACTGCGAAGGAGATTTGGGATCATCTCGAAATGTTGTACGAGGCCAGGTCACTTCAGAACAAGATTTTCCTTAAGAGAAGATTGTATACTCTTCGGATGTCAAAATCTACTCAAATAACAGAGCACATCAACATGTTGAATATGTTATTTTCTCAACTCATATCATTGGGTTGTAAAATATGTCAAATGAACGTGTTGAACTTCTACTTCAAAGTCTTGATCAACTTGTCATCGACCTGACAAATAGTATTCTCACCAACTATCTAAACTTTGAAGATATTGCAGCTGCTATCTTAGAAAAGGAAAATCGACGCAAGAACAAAGTAGATAAGTTGGCGAGTTCACAACAAGCAGAGGCTATGGTGGTGACAAGAGGTAGATCAATGGAATATGGCTCAGGTGTGAGCCAAAATCAAGGAAGGGCAAAATCAAGAAGTAAGAAGAACATGAAGTGCTACCACTATGGCAAGAAGGGTCATCTGAAGCAGTATTGTTGGAGTTAAATAAGAAAGATTTCAATCCTCAGGGAAACGTAGCAAGCACCTCAAATGAAGGTGATGTCTTGTGTTGTGAAGCAGCGACAACTGTTGAAGGTATAAAGAGTTTAACTGACGTGTGGTTCATCGACTCAAGAGCCACTTATCACATGATCTCTTGACGAGAATGGTTCGATCATTATAAACCTATCTCTGGAGGATCTGTGTTCAGCTATGATGATCATGCCTTGAAGATTGTCGGTATTGGAACTATCAAGTTGAAGTTCCATGACAATACAGTTCGCACAATTCAACAAGTGCGACATGTAGAAGGCCTGACAAGGAACTTGCTCTTGGTAGGTCAACTAGATGACCTTGATTGCAAGGTGATCGTGGAGAAAGCTATCATGAAGGTGATGTGAGGTGCGCTTACACTTATGAAGGGAAAAGGGTGGCTACAAACTTGTACATGTTGGAGGGAAAGACTTTGCAAGAAGGAGAAGCATCAGTTGCCACAAAAAGTCCAAGTGAAAAGCTATCGATGATCTGGCATCAGAAACATGGACACATGTCCGAACAAGGAATGAAAGTTCTTGCAGAGGAGAATCTATTCCCAAGGCTCACCAAGGTATCTCTACCCTTTTGTGAGCATTGTGTTACAAGTAAGCAGCACAGGTTAAAGTTCAACACATCAAATTCTAGAAGTAAAGAGATTCTAGAATTGGTTCACTCTGATGTATGGCAAGTACTGATTACATCTCTAGGAGGAGTAGGGTACTTCGTGTCCTTTATAGATGACTACTCCGTAAGATATTTGGTGTATCCTATCAAGAGGAAGGCAGATATGTGTTCAGTCTTCAAAGTGTTCAAGCCACAAGTAGAACTTCAATCTGGCAAGAAGATGAAGTGTTTGCGGACAGATAATGGAGGGGAATATACAAGCAATGAGTTTGCGGATTTCTGCAATCAGGAAGGCATCCAGAGGCAGTTCATTACGGCTTACACTCCTCAGCAAAATGGAGTAGCAGAGGATGAATAGAACATTGTTGGAGAGAACAAGAGCAATGTTAGCAGCTGCAGGCTTAGACAAAGCTTTCTGAGTAGAAGCAGTTAATACCGCCTGTTATGTAGTGAATCGTGCTTCATCAACCGCAATTGAGTTGAAGACACCGATGCAGATATGGACAGGCAAGCCAGCTAATTATTCAAAGATGTCTTTTAGTTATGTATCTATTCCCTCCAGCTTTAGTAATTTAATCATGAACTACATTTATCTCTTATAGCCCTTTTATGGAGGATTAAATTTCTATCGAAAAGAGGACAACATAAGACTAAAGGCCACCGTATTTTCATCAACTAAATTATTTTTGTTAAAGATAACAAATTGATTTGGCCAATTAAGGAGTTAGCATATTTATTCAATATTGAAAGGGTTGAATATTGTATTTGCAATTTGTTAAATAATATTTCCCAAGTATGCTCAAGAAGTCTCTAGAAACTACTGGGTTAAGTAAGCTTGCTCAAGAAACTTCATTGGAAAATTGAAGAAATTATAAGCTACTAGAGTGCAATATGTGGCAAAATTATGGCCACTAGATCTTCATGTACCCAAGGTTAATATGTGGCATAATTATAACCATAGAATTTTGTTAGATGAGCAAGTACGGATGGGCTATAAATAGGAGGGCACCCATGCTTGGCAAACCATCCCAAAAAAATCCCCAATTCCAAGTGAACTAAAGTGAATGTGAGGTTTGGTGAGATAAAGATAGAATGTTTCTTCTTATGAGAGATTTTGTTCTCCATAAGAAAGAAAGTTTGTAACTCCTAATTGAGTGGATTTTTTCTTCCTTGCCAGTGGTTTTTGCCCTAATTTGTTTAGGGGTTTTCCACGTAAAATCATTGTGTCATTTTCTTCTTTCTTTTTACTTCTTCTCAAATCCATTTTAGCTGCGTCTTACTCTATCCGATTCCAATCTTTTTTATAACATATGTGATTAAACCAAAGGAAAGGAAGACTTTAGATGTTAAAGTTCCCCTTAAGTACCCTAGACATAGGACCTTATCCCATGGTTGCGATTGATTTATCAAACTAAGACTTTTTATTAATAGAAATCTTAATAAGGGGCTTAGAACTTGGAGATCTCTTGAACATAACTAGGTTAAGACGCATAATCGTTCGATAACATGGAGGGACGTCTAGCGCCTATTGGTATTCCTGTGCTATTTTCGATTAATTTGAAGTAAAAGGATTAGATTTTCGTTCTTAAGTGTTTCTAAATCAAGAAATTATATATTATTTTACAAGGGAATAATCAAAATAAACTTTGGAGCTTCCGGGAACTAAACAAAATTTCCCGTAATCACAAAACATGAAGATTCTAGGAATAATAAAAGAAATGGAGGTGCAGGGAATCGAACCCTGTACCTCTCGCATGCAAAGCGAGCGCTCTACCATATGAGCTACACCCCCTAAATTTATTAATAAAAATTTCAAGTTGTAATGGATTATATAATTGTGTACAAAGCATTCCATTTTTTCTTTTTCTTCTTTTAATTTCATTCTTAGAGTTCGTAAATAAATATACATTTTATTTAGGAAATCAATACAATCAAACAAGTAACCAAGATCTAACTGGACTAAAATAACCAACAAAGTTCGGAAACCAAATACCAATCAGCCACTAAGCCATTTTCCATAGCCATTCTTACAATATCATGGGCCACCAAATTGGTCTCTCTCTAGATGTGCCTCAACCATGCAATCTGCCATCCCACAACAAAGCTTCTAATCTGGTCAACAACATATTCTACATCTTCCCTTCAACGATTCGGATTGCATGAAGCGAATGAGCTTCAATATGAATAGGTAATGTCCGCCATCGCAGCTTTGTCTGTATTCCTCTTCCAAGAATTATCTTGTGTTAGATAATGTTATTTGAATGATAATTAGATTCGAATCAAATATTTTTTGAATTAGATTTCTCATTCCTAGGATAGGAATTATAGTAATTATAGTGGCATAAATAGGTTATTAGGTTTGTATGAAATAATTCAATTCAATGAATTCTAATTGTTATTTTCTCGATTTTCTCTCCTCCCCTAAAATTAACATCGTATAAGAACATTTATTCTTGTAATTTGTTTGTTTTGTTAAAATCATTGGTTTATTTGATGCATTAATCGTTGGTTTAGCAGTGGAAATTTACGTATTCAAGACCTTAGGTTTTTCAGTGGAAATTTACGTGTTTGAGGTCTCTGAATTTTGATTTTGAACTGATATTCTTATTATTTAACAATGTTGTAGATGTTGTTTGAGACCGTCATATTACAATGTTGAATCTCATTGGATTTGCAACTACTGATTGGATATTCGTAGATCAATCTTTTGTTCAATTTGCAATATTAGTATTGTGGCGGGGTGGATTTGCTTGGTTTTTGCATGGAATTTGCATGGTAATAATTCGTGATTTGCAATATGGTTGACAATTTTATAGGAAAAGATTGAATTGTAGTAGTTTCTTGGATTGTGGTTTTATAGTTTTCGTGGCTTGTGATTCTATAGTTTTCGTGGCTTTTGAGAAAATCAATTGTTTCCAAATTGAACATAGTTGATTTGTGATTTGGATTGTGAGTTGTTTTGGTGAGTTTGCAGTGGTGTGGACGACAATATGGAGGAATAGGAAGAGGGAGGTACAATTGTTTGCAATATTCTCTGGATCTTGATGGATTATATTTGATGGCGATGAAGAGAAATTAAGTTTGTGTTTTTCTAAAAATTACGGTTTGCTTGAAAATCACGATTTCAGTTTATTGGAACGTGAGAACTCCTCTGCAGCCTTTGAAACATGTTGTTCTTAAAGGGGAGCTAAAGGAGGCGAGGGCCGAGAACGAGGTCCTCAAGTCCAAGTTGGAGGCTGAGTGCAAGAGTGCCGAAAAGAAGGCGGAGCACCAGTAG

mRNA sequence

ATGACGGTAAAGTACGATATTGAGAAATTCAATGGGACTAATTCCTCGTTGTGGAAGATGAAGATGAAGGCTATCTTGAGAAAAGATAATTGCTTTGCAGCCATCAGTGTGAGGCTGGTAGATGTCACAGATGATAAGTGGAATGAGATAAACGGGAATGTTGTTGCAAATATTCATCTGGCTCTAGCAGATAAAGTGTTGTCAAGCATAGAGGAGAAGAAAACTGCGAAGGAGATTTGGGATCATCTCGAAATGTTGTACGAGGCCAGGTCACTTCAGAACAAGATTTTCCTTAAGAGAAGATTGTATACTCTTCGGATGTCAAAATCTACTCAAATAACAGAGCACATCAACATTCTTGATCAACTTGTCATCGACCTGACAAATAGTATTCTCACCAACTATCTAAACTTTGAAGATATTGCAGCTGCTATCTTAGAAAAGGAAAATCGACGCAAGAACAAAGTAGATAAGTTGGCGAGTTCACAACAAGCAGAGGCTATGGTGGTGACAAGAGGTAGATCAATGGAATATGGCTCAGAAGGGTCATCTGAAGCAGTATTGTTGGAGTTAAATAAGAAAGATTTCAATCCTCAGGGAAACGTAGCAAGCACCTCAAATGAAGGTGATGTCTTGTGTTGTGAAGCAGCGACAACTGTTGAAGGATCTGTGTTCAGCTATGATGATCATGCCTTGAAGATTGTCGGTATTGGAACTATCAAGTTGAAGTTCCATGACAATACAGTTCGCACAATTCAACAAGTGCGACATGTAGAAGGCCTGACAAGGAACTTGCTCTTGGTAGGGAAAAGGGTGGCTACAAACTTGTACATGTTGGAGGGAAAGACTTTGCAAGAAGGAGAAGCATCAGTTGCCACAAAAAGTCCAAGTGAAAAGCTATCGATGATCTGGCATCAGAAACATGGACACATGTCCGAACAAGGAATGAAAGTTCTTGCAGAGGAGAATCTATTCCCAAGGCTCACCAAGCCTTTGAAACATGTTGTTCTTAAAGGGGAGCTAAAGGAGGCGAGGGCCGAGAACGAGGTCCTCAAGTCCAAGTTGGAGGCTGAGTGCAAGAGTGCCGAAAAGAAGGCGGAGCACCAGTAG

Coding sequence (CDS)

ATGACGGTAAAGTACGATATTGAGAAATTCAATGGGACTAATTCCTCGTTGTGGAAGATGAAGATGAAGGCTATCTTGAGAAAAGATAATTGCTTTGCAGCCATCAGTGTGAGGCTGGTAGATGTCACAGATGATAAGTGGAATGAGATAAACGGGAATGTTGTTGCAAATATTCATCTGGCTCTAGCAGATAAAGTGTTGTCAAGCATAGAGGAGAAGAAAACTGCGAAGGAGATTTGGGATCATCTCGAAATGTTGTACGAGGCCAGGTCACTTCAGAACAAGATTTTCCTTAAGAGAAGATTGTATACTCTTCGGATGTCAAAATCTACTCAAATAACAGAGCACATCAACATTCTTGATCAACTTGTCATCGACCTGACAAATAGTATTCTCACCAACTATCTAAACTTTGAAGATATTGCAGCTGCTATCTTAGAAAAGGAAAATCGACGCAAGAACAAAGTAGATAAGTTGGCGAGTTCACAACAAGCAGAGGCTATGGTGGTGACAAGAGGTAGATCAATGGAATATGGCTCAGAAGGGTCATCTGAAGCAGTATTGTTGGAGTTAAATAAGAAAGATTTCAATCCTCAGGGAAACGTAGCAAGCACCTCAAATGAAGGTGATGTCTTGTGTTGTGAAGCAGCGACAACTGTTGAAGGATCTGTGTTCAGCTATGATGATCATGCCTTGAAGATTGTCGGTATTGGAACTATCAAGTTGAAGTTCCATGACAATACAGTTCGCACAATTCAACAAGTGCGACATGTAGAAGGCCTGACAAGGAACTTGCTCTTGGTAGGGAAAAGGGTGGCTACAAACTTGTACATGTTGGAGGGAAAGACTTTGCAAGAAGGAGAAGCATCAGTTGCCACAAAAAGTCCAAGTGAAAAGCTATCGATGATCTGGCATCAGAAACATGGACACATGTCCGAACAAGGAATGAAAGTTCTTGCAGAGGAGAATCTATTCCCAAGGCTCACCAAGCCTTTGAAACATGTTGTTCTTAAAGGGGAGCTAAAGGAGGCGAGGGCCGAGAACGAGGTCCTCAAGTCCAAGTTGGAGGCTGAGTGCAAGAGTGCCGAAAAGAAGGCGGAGCACCAGTAG

Protein sequence

MTVKYDIEKFNGTNSSLWKMKMKAILRKDNCFAAISVRLVDVTDDKWNEINGNVVANIHLALADKVLSSIEEKKTAKEIWDHLEMLYEARSLQNKIFLKRRLYTLRMSKSTQITEHINILDQLVIDLTNSILTNYLNFEDIAAAILEKENRRKNKVDKLASSQQAEAMVVTRGRSMEYGSEGSSEAVLLELNKKDFNPQGNVASTSNEGDVLCCEAATTVEGSVFSYDDHALKIVGIGTIKLKFHDNTVRTIQQVRHVEGLTRNLLLVGKRVATNLYMLEGKTLQEGEASVATKSPSEKLSMIWHQKHGHMSEQGMKVLAEENLFPRLTKPLKHVVLKGELKEARAENEVLKSKLEAECKSAEKKAEHQ

Homology

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BLAST of Moc09g13320 vs. NCBI nr
Match: KAA0026163.1 (Gag-Pol [Cucumis melo var. makuwa] >TYK11620.1 Gag-Pol [Cucumis melo var. makuwa])

HSP 1 Score: 374.8 bits (961), Expect = 8.7e-100
Identity = 222/427 (51.99%), Postives = 263/427 (61.59%), Query Frame = 0


Query: 1   MTVKYDIEKFNGTNSSLWKMKMKAILRKDNCFAAISVRLVDVTDD-KWNEINGNVVANIH 60
           M  K++IEKFNGTN SLW +KMK +LR DNC  AI     ++TDD KWNE++GN + NIH
Sbjct: 1   MAAKFEIEKFNGTNFSLWTLKMKVVLRNDNCLEAIDKGPAEITDDNKWNEMDGNAMENIH 60

Query: 61  LALADKVLSSIEEKKTAKEIWDHLEMLYEARSLQNKIFLKRRLYTLRMSKSTQITEHINI 120
           LALAD VLSSI+EKK AKEIWDHL  LYE +SL NKIFLKR+LYTLRMS+ST +TEH+N 
Sbjct: 61  LALADNVLSSIKEKKIAKEIWDHLTKLYETKSLHNKIFLKRKLYTLRMSESTSMTEHMNT 120

Query: 121 L-------------------------------DQLVIDLTNSILTNYLNFEDIAAAILEK 180
           L                               DQLVI+L N+IL +YL+F+D+ +A+LE+
Sbjct: 121 LNTLFSQLALLGYKIEPNERAELLLQSLLDSYDQLVINLKNNILIDYLSFDDVVSAVLEE 180

Query: 181 ENRRKNKVDKLASSQQAEAMVVTRGRSMEYGS---EGSSEAVLLELNKKDFNPQGNVAST 240
           ENRRKNK DKL + QQAEA+ VTRGR +E  +   EG S       ++KD NPQGNVAST
Sbjct: 181 ENRRKNKEDKLITLQQAEALTVTRGRPLELAAKIKEGQS-------HEKDSNPQGNVAST 240

Query: 241 SNEGDVLCCEAATTVE----------------------------------GSVFSYDDHA 300
            NEG  L CEA TT E                                  GS+FS +DHA
Sbjct: 241 INEGGALSCEAVTTTEGKKRMADGWFFDSGATYHMTSRREWFHNYKPISGGSLFSCNDHA 300

Query: 301 LKIVGIGTIKLKFHDNTVRTIQQVRHVEGLTRNLLLV----------------------- 331
           LKIV IGTIKLK HDN V TIQQVRHVE L +NLLL+                       
Sbjct: 301 LKIVDIGTIKLKLHDNIVCTIQQVRHVENLKKNLLLLGQLDDLDCKVVVEKRLTKLIKGA 360

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BLAST of Moc09g13320 vs. NCBI nr
Match: BAD34493.1 (Gag-Pol [Ipomoea batatas])

HSP 1 Score: 359.4 bits (921), Expect = 3.8e-95
Identity = 217/444 (48.87%), Postives = 271/444 (61.04%), Query Frame = 0


Query: 1   MTVKYDIEKFNGTNSSLWKMKMKAILRKDNCFAAISVRLVDVTDD-KWNEINGNVVANIH 60
           M  K++IEKFNG N SLWK+K+KAILRKDNC AAIS R VD TDD KW+E+N + +A+++
Sbjct: 1   MAAKFEIEKFNGKNFSLWKLKVKAILRKDNCLAAISERPVDFTDDKKWSEMNEDAMADLY 60

Query: 61  LALADKVLSSIEEKKTAKEIWDHLEMLYEARSLQNKIFLKRRLYTLRMSKSTQITEHINI 120
           L++AD VLSSIEEKKTA EIWDHL  LYEA+SL NKIFLKR+LYTLRMS+ST +TEH+N 
Sbjct: 61  LSIADGVLSSIEEKKTANEIWDHLNRLYEAKSLHNKIFLKRKLYTLRMSESTSVTEHLNT 120

Query: 121 L-------------------------------DQLVIDLTNSILTNYLNFEDIAAAILEK 180
           L                               DQL+I+LTN+ILT+YL F+D+AAA+LE+
Sbjct: 121 LNTLFSQLTSLSCKIEPQERAELLLQSLPDSYDQLIINLTNNILTDYLVFDDVAAAVLEE 180

Query: 181 ENRRKNKVDKLASSQQAEAMVVTRGRSMEYGSEG------SSEAVLLELN-------KKD 240
           E+RRKNK D+  + QQAEA+ V RGRS E G         SS+  L   N       KKD
Sbjct: 181 ESRRKNKEDRQVNLQQAEALTVMRGRSTERGQSSGRGRSKSSKKNLTCYNCGKKGHLKKD 240

Query: 241 -------FNPQGNVASTSNEGDVLCCEAATTVE--------------------------- 300
                   NPQGNVASTS++G  LCCEA+   E                           
Sbjct: 241 CWNLAQNSNPQGNVASTSDDGSALCCEASIAREGRKRFADIWLIDSGATYHMTSRKEWFH 300

Query: 301 -------GSVFSYDDHALKIVGIGTIKLKFHDNTVRTIQQVRHVEGLTRNLL-------- 331
                  GSV+S DDHAL+I+GIGTIKLK +D TV+T+Q VRHV+GL +NLL        
Sbjct: 301 HYEPISGGSVYSCDDHALEIIGIGTIKLKMYDGTVQTVQDVRHVKGLKKNLLSYGILDNS 360

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BLAST of Moc09g13320 vs. NCBI nr
Match: KAE8686521.1 (Protein STRUBBELIG-RECEPTOR FAMILY 1 [Hibiscus syriacus])

HSP 1 Score: 352.1 bits (902), Expect = 6.0e-93
Identity = 214/447 (47.87%), Postives = 265/447 (59.28%), Query Frame = 0


Query: 1   MTVKYDIEKFNGTNSSLWKMKMKAILRKDNCFAAISVRLVDVTDD-KWNEINGNVVANIH 60
           MT K+DIEKFNG N SLWK+KMKAILRKD C AAI+ R VD TDD KWNE++GN +AN H
Sbjct: 1   MTTKFDIEKFNGRNFSLWKLKMKAILRKDGCLAAINERPVDFTDDNKWNEMDGNAMANFH 60

Query: 61  LALADKVLSSIEEKKTAKEIWDHLEMLYEARSLQNKIFLKRRLYTLRMSKSTQITEHINI 120
           LAL D+VLSSIEEKKTAKEIWDHL  LYEA SL NKIFLKR+LYTLRM +ST +TEH+N 
Sbjct: 61  LALTDEVLSSIEEKKTAKEIWDHLTKLYEATSLHNKIFLKRKLYTLRMPESTSVTEHLNT 120

Query: 121 L-------------------------------DQLVIDLTNSILTNYLNFEDIAAAILEK 180
           L                               DQL+I+LTNS +T+ L F+D+AAA+L++
Sbjct: 121 LNTLFSQLTSLSCKIGEQERAELLLQSLPDSYDQLIINLTNSNVTS-LVFDDVAAAVLQE 180

Query: 181 ENRRKNKVDKLASSQQAEAMVVTRGRSME------------------------YGSEGSS 240
           ENRRKNK D+  + QQAEA+  TRGRS E                         G +G  
Sbjct: 181 ENRRKNKEDRQVNLQQAEALTTTRGRSTERGQSSSHKYGRSKSRSKKNLKCYHCGKKGHL 240

Query: 241 EAVLLELNKKDFNPQGNVASTSNEGDVLCCEAATTVE----------------------- 300
           +     LNK   NPQGN A+TS++GD LCCEA+TTV+                       
Sbjct: 241 KKDCWSLNKNS-NPQGNTANTSDDGDALCCEASTTVKGRKRFADIWLIDSGATYYMTSRR 300

Query: 301 -----------GSVFSYDDHALKIVGIGTIKLKFHDNTVRTIQQVRHVEGLTRNLL---- 330
                      GSV+S +DHAL+I+G+GTIKLK +D T++ ++ VRHV+GL +NLL    
Sbjct: 301 EWFHHYEPVSGGSVYSCNDHALEIIGVGTIKLKMYDGTIKVVRDVRHVKGLKKNLLSYGL 360

[Close]

BLAST of Moc09g13320 vs. NCBI nr
Match: KAE8702857.1 (Detected protein of unknown function [Hibiscus syriacus])

HSP 1 Score: 347.4 bits (890), Expect = 1.5e-91
Identity = 201/385 (52.21%), Postives = 252/385 (65.45%), Query Frame = 0


Query: 1   MTVKYDIEKFNGTNSSLWKMKMKAILRKDNCFAAISVRLVDVTDD-KWNEINGNVVANIH 60
           M  K+DIEKFN  N SLWK+KMKAILRKD C AAIS R VD  DD KWNE++GN ++N H
Sbjct: 1   MATKFDIEKFNRRNFSLWKLKMKAILRKDGCLAAISERPVDFIDDNKWNEMDGNAMSNFH 60

Query: 61  LALADKVLSSIEEKKTAKEIWDHLEMLYEARSLQNKIFLKRRLYTLRMSKSTQITEHINI 120
           LALAD+VLSSIEEKKTAKEIWDHL  LYE  SL NKIFLKR+LYTLRMS+ST +TEH+N 
Sbjct: 61  LALADEVLSSIEEKKTAKEIWDHLTKLYEVTSLHNKIFLKRKLYTLRMSESTSVTEHLNT 120

Query: 121 L-------------------------------DQLVIDLTNSILTNYLNFEDIAAAILEK 180
           L                               DQL+I+LTNS +T+ + F+D+AAA+L++
Sbjct: 121 LNTLFSQLTSLRCTIGEQERVELLLQSLPDSYDQLIINLTNSNVTSIV-FDDVAAAVLQE 180

Query: 181 ENRRKNKVDKLASSQQAEAMVVTRGRSMEYGSEGSSEAVLLELNKKDFNPQGNVASTSNE 240
           ENRRKNK D+  + QQAEA+   RGRS E G   S             +  GN A++S++
Sbjct: 181 ENRRKNKEDRQVNLQQAEALTTMRGRSAERGQSSS-------------HKHGNTANSSDD 240

Query: 241 GDVLCCEAATTVE-GSVFSYDDHALKIVGIGTIKLKFHDNTVRTIQQVRHVEGLTRNLL- 300
           GD L CEA+TTVE GSV+S +DHAL+I+G+GTIKLK +D T++ ++ VRHV+GL +NLL 
Sbjct: 241 GDTLLCEASTTVEGGSVYSCNDHALEIIGVGTIKLKMYDGTIKVVRDVRHVKGLKKNLLS 300

Query: 301 ---------------------------LVGKRVATNLYMLEGKTLQEGEASVATKSPSEK 325
                                      L G+++A NLYML+G+TL E EASVA  S S  
Sbjct: 301 YGLLDNNASKIETRKGIMKVFHGALVVLKGEKIAANLYMLKGETLLEAEASVA--SCSSD 360

[Close]

BLAST of Moc09g13320 vs. NCBI nr
Match: KAA0044949.1 (hypothetical protein E6C27_scaffold74G002510 [Cucumis melo var. makuwa])

HSP 1 Score: 345.9 bits (886), Expect = 4.3e-91
Identity = 206/386 (53.37%), Postives = 245/386 (63.47%), Query Frame = 0


Query: 1   MTVKYDIEKFNGTNSSLWKMKMKAILRKDNCFAAISVRLVDVTDD-KWNEINGNVVANIH 60
           M  K+ IEKFNGTN SLWK+KMKAI RKDNC  AI  R  ++TDD KWNE++GN +ANIH
Sbjct: 1   MMTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIH 60

Query: 61  LALADKVLSSIEEKKTAKEIWDHLEMLYEARSLQNKIFLKRRLYTLRMSKSTQITEHINI 120
           LAL D VLSSIEEKK AKEIWDHL  LYEA+SL NKIFLKR+LYTLRMS ST +TEH+N 
Sbjct: 61  LALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKLYTLRMSGSTLMTEHMNT 120

Query: 121 L-------------------------------DQLVIDLTNSILTNYLNFEDIAAAILEK 180
           L                               DQLVI+LTN+ILT+YL+F+D+AA +LE+
Sbjct: 121 LNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEE 180

Query: 181 ENRRKNKVDKLASSQQAEAMVVTRGRSMEYGSEGSS------------------------ 240
           ENR KNK DKL SSQQAEA+ VTR R +E  S GS                         
Sbjct: 181 ENRCKNKEDKLVSSQQAEALTVTRVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHV 240

Query: 241 EAVLLELNKKDFNPQGNVASTSNEGDVLCCEAATTVEGSVFSYDDHALKIVGIGTIKLKF 300
           +    +LNKKDFNPQGNVAST NEG  L CEA TT+EG +   DD   K+V         
Sbjct: 241 KKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGQL---DDLDCKVV--------V 300

Query: 301 HDNTVRTIQQVRHVEGLTRNLLLVGKRVATNLYMLEGKTLQEGEASVATKSPSEKLSMIW 331
               ++ IQ           +L+  ++V  NLYMLEG+TLQEGEASVA+ S  E LSM+W
Sbjct: 301 EKRLMKVIQGAL--------VLMKRRKVDANLYMLEGETLQEGEASVASSSSGENLSMMW 360

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BLAST of Moc09g13320 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.3e-18
Identity = 111/451 (24.61%), Postives = 180/451 (39.91%), Query Frame = 0


Query: 3   VKYDIEKFNGTNS-SLWKMKMKAILRKDNCFAAISV---RLVDVTDDKWNEINGNVVANI 62
           VKY++ KFNG N  S W+ +M+ +L +      + V   +   +  + W +++    + I
Sbjct: 4   VKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAI 63

Query: 63  HLALADKVLSSIEEKKTAKEIWDHLEMLYEARSLQNKIFLKRRLYTLRMSKSTQITEHIN 122
            L L+D V+++I ++ TA+ IW  LE LY +++L NK++LK++LY L MS+ T    H+N
Sbjct: 64  RLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLN 123

Query: 123 ILDQLV----------------IDLTNSILTNY-------------LNFEDIAAAILEKE 182
           + + L+                I L NS+ ++Y             +  +D+ +A+L  E
Sbjct: 124 VFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNE 183

Query: 183 NRRKNKVDKLASSQQAEAMVVT-RGRSME-----YGSEG--------SSEAVLLELN--- 242
             RK          Q +A++   RGRS +     YG  G        S   V    N   
Sbjct: 184 KMRKK------PENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQ 243

Query: 243 ----KKDF-NPQGNVASTSNEG-------------------------------------D 302
               K+D  NP+     TS +                                      D
Sbjct: 244 PGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVD 303

Query: 303 VLCCEAATTVE-----------GSVFSYDDHALKIVGIGTIKLKFHDNTVRTIQQVRHVE 325
                 AT V            G+V   +    KI GIG I +K +      ++ VRHV 
Sbjct: 304 TAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVP 363

[Close]

BLAST of Moc09g13320 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 68.6 bits (166), Expect = 1.7e-10
Identity = 33/124 (26.61%), Postives = 71/124 (57.26%), Query Frame = 0


Query: 4   KYDIEKFNGTNSSLWKMKMKAILRKDNCFAAISVRLVDVTDDKWNEINGNVVANIHLALA 63
           K +I+ F+G   ++WK +++A+L + +    +   + +  DD W +      + I   L+
Sbjct: 5   KRNIKPFDGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEVDDSWKKAERCAKSTIIEYLS 64

Query: 64  DKVLSSIEEKKTAKEIWDHLEMLYEARSLQNKIFLKRRLYTLRMSKSTQITEHINILDQL 123
           D  L+      TA++I ++L+ +YE +SL +++ L++RL +L++S    +  H +I D+L
Sbjct: 65  DSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHIFDEL 124

Query: 124 VIDL 128
           + +L
Sbjct: 125 ISEL 128

[Close]

BLAST of Moc09g13320 vs. ExPASy TrEMBL
Match: A0A5A7SNG9 (Gag-Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G00680 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 4.2e-100
Identity = 222/427 (51.99%), Postives = 263/427 (61.59%), Query Frame = 0


Query: 1   MTVKYDIEKFNGTNSSLWKMKMKAILRKDNCFAAISVRLVDVTDD-KWNEINGNVVANIH 60
           M  K++IEKFNGTN SLW +KMK +LR DNC  AI     ++TDD KWNE++GN + NIH
Sbjct: 1   MAAKFEIEKFNGTNFSLWTLKMKVVLRNDNCLEAIDKGPAEITDDNKWNEMDGNAMENIH 60

Query: 61  LALADKVLSSIEEKKTAKEIWDHLEMLYEARSLQNKIFLKRRLYTLRMSKSTQITEHINI 120
           LALAD VLSSI+EKK AKEIWDHL  LYE +SL NKIFLKR+LYTLRMS+ST +TEH+N 
Sbjct: 61  LALADNVLSSIKEKKIAKEIWDHLTKLYETKSLHNKIFLKRKLYTLRMSESTSMTEHMNT 120

Query: 121 L-------------------------------DQLVIDLTNSILTNYLNFEDIAAAILEK 180
           L                               DQLVI+L N+IL +YL+F+D+ +A+LE+
Sbjct: 121 LNTLFSQLALLGYKIEPNERAELLLQSLLDSYDQLVINLKNNILIDYLSFDDVVSAVLEE 180

Query: 181 ENRRKNKVDKLASSQQAEAMVVTRGRSMEYGS---EGSSEAVLLELNKKDFNPQGNVAST 240
           ENRRKNK DKL + QQAEA+ VTRGR +E  +   EG S       ++KD NPQGNVAST
Sbjct: 181 ENRRKNKEDKLITLQQAEALTVTRGRPLELAAKIKEGQS-------HEKDSNPQGNVAST 240

Query: 241 SNEGDVLCCEAATTVE----------------------------------GSVFSYDDHA 300
            NEG  L CEA TT E                                  GS+FS +DHA
Sbjct: 241 INEGGALSCEAVTTTEGKKRMADGWFFDSGATYHMTSRREWFHNYKPISGGSLFSCNDHA 300

Query: 301 LKIVGIGTIKLKFHDNTVRTIQQVRHVEGLTRNLLLV----------------------- 331
           LKIV IGTIKLK HDN V TIQQVRHVE L +NLLL+                       
Sbjct: 301 LKIVDIGTIKLKLHDNIVCTIQQVRHVENLKKNLLLLGQLDDLDCKVVVEKRLTKLIKGA 360

[Close]

BLAST of Moc09g13320 vs. ExPASy TrEMBL
Match: Q6BCY1 (Gag-Pol OS=Ipomoea batatas OX=4120 GN=Rtsp-1AA PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.8e-95
Identity = 217/444 (48.87%), Postives = 271/444 (61.04%), Query Frame = 0


Query: 1   MTVKYDIEKFNGTNSSLWKMKMKAILRKDNCFAAISVRLVDVTDD-KWNEINGNVVANIH 60
           M  K++IEKFNG N SLWK+K+KAILRKDNC AAIS R VD TDD KW+E+N + +A+++
Sbjct: 1   MAAKFEIEKFNGKNFSLWKLKVKAILRKDNCLAAISERPVDFTDDKKWSEMNEDAMADLY 60

Query: 61  LALADKVLSSIEEKKTAKEIWDHLEMLYEARSLQNKIFLKRRLYTLRMSKSTQITEHINI 120
           L++AD VLSSIEEKKTA EIWDHL  LYEA+SL NKIFLKR+LYTLRMS+ST +TEH+N 
Sbjct: 61  LSIADGVLSSIEEKKTANEIWDHLNRLYEAKSLHNKIFLKRKLYTLRMSESTSVTEHLNT 120

Query: 121 L-------------------------------DQLVIDLTNSILTNYLNFEDIAAAILEK 180
           L                               DQL+I+LTN+ILT+YL F+D+AAA+LE+
Sbjct: 121 LNTLFSQLTSLSCKIEPQERAELLLQSLPDSYDQLIINLTNNILTDYLVFDDVAAAVLEE 180

Query: 181 ENRRKNKVDKLASSQQAEAMVVTRGRSMEYGSEG------SSEAVLLELN-------KKD 240
           E+RRKNK D+  + QQAEA+ V RGRS E G         SS+  L   N       KKD
Sbjct: 181 ESRRKNKEDRQVNLQQAEALTVMRGRSTERGQSSGRGRSKSSKKNLTCYNCGKKGHLKKD 240

Query: 241 -------FNPQGNVASTSNEGDVLCCEAATTVE--------------------------- 300
                   NPQGNVASTS++G  LCCEA+   E                           
Sbjct: 241 CWNLAQNSNPQGNVASTSDDGSALCCEASIAREGRKRFADIWLIDSGATYHMTSRKEWFH 300

Query: 301 -------GSVFSYDDHALKIVGIGTIKLKFHDNTVRTIQQVRHVEGLTRNLL-------- 331
                  GSV+S DDHAL+I+GIGTIKLK +D TV+T+Q VRHV+GL +NLL        
Sbjct: 301 HYEPISGGSVYSCDDHALEIIGIGTIKLKMYDGTVQTVQDVRHVKGLKKNLLSYGILDNS 360

[Close]

BLAST of Moc09g13320 vs. ExPASy TrEMBL
Match: A0A6A2Z3I3 (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111059pilonHSYRG00161 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 2.9e-93
Identity = 214/447 (47.87%), Postives = 265/447 (59.28%), Query Frame = 0


Query: 1   MTVKYDIEKFNGTNSSLWKMKMKAILRKDNCFAAISVRLVDVTDD-KWNEINGNVVANIH 60
           MT K+DIEKFNG N SLWK+KMKAILRKD C AAI+ R VD TDD KWNE++GN +AN H
Sbjct: 1   MTTKFDIEKFNGRNFSLWKLKMKAILRKDGCLAAINERPVDFTDDNKWNEMDGNAMANFH 60

Query: 61  LALADKVLSSIEEKKTAKEIWDHLEMLYEARSLQNKIFLKRRLYTLRMSKSTQITEHINI 120
           LAL D+VLSSIEEKKTAKEIWDHL  LYEA SL NKIFLKR+LYTLRM +ST +TEH+N 
Sbjct: 61  LALTDEVLSSIEEKKTAKEIWDHLTKLYEATSLHNKIFLKRKLYTLRMPESTSVTEHLNT 120

Query: 121 L-------------------------------DQLVIDLTNSILTNYLNFEDIAAAILEK 180
           L                               DQL+I+LTNS +T+ L F+D+AAA+L++
Sbjct: 121 LNTLFSQLTSLSCKIGEQERAELLLQSLPDSYDQLIINLTNSNVTS-LVFDDVAAAVLQE 180

Query: 181 ENRRKNKVDKLASSQQAEAMVVTRGRSME------------------------YGSEGSS 240
           ENRRKNK D+  + QQAEA+  TRGRS E                         G +G  
Sbjct: 181 ENRRKNKEDRQVNLQQAEALTTTRGRSTERGQSSSHKYGRSKSRSKKNLKCYHCGKKGHL 240

Query: 241 EAVLLELNKKDFNPQGNVASTSNEGDVLCCEAATTVE----------------------- 300
           +     LNK   NPQGN A+TS++GD LCCEA+TTV+                       
Sbjct: 241 KKDCWSLNKNS-NPQGNTANTSDDGDALCCEASTTVKGRKRFADIWLIDSGATYYMTSRR 300

Query: 301 -----------GSVFSYDDHALKIVGIGTIKLKFHDNTVRTIQQVRHVEGLTRNLL---- 330
                      GSV+S +DHAL+I+G+GTIKLK +D T++ ++ VRHV+GL +NLL    
Sbjct: 301 EWFHHYEPVSGGSVYSCNDHALEIIGVGTIKLKMYDGTIKVVRDVRHVKGLKKNLLSYGL 360

[Close]

BLAST of Moc09g13320 vs. ExPASy TrEMBL
Match: A0A6A3AGK4 (Integrase catalytic domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110480pilonHSYRG00021 PE=3 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 7.2e-92
Identity = 201/385 (52.21%), Postives = 252/385 (65.45%), Query Frame = 0


Query: 1   MTVKYDIEKFNGTNSSLWKMKMKAILRKDNCFAAISVRLVDVTDD-KWNEINGNVVANIH 60
           M  K+DIEKFN  N SLWK+KMKAILRKD C AAIS R VD  DD KWNE++GN ++N H
Sbjct: 1   MATKFDIEKFNRRNFSLWKLKMKAILRKDGCLAAISERPVDFIDDNKWNEMDGNAMSNFH 60

Query: 61  LALADKVLSSIEEKKTAKEIWDHLEMLYEARSLQNKIFLKRRLYTLRMSKSTQITEHINI 120
           LALAD+VLSSIEEKKTAKEIWDHL  LYE  SL NKIFLKR+LYTLRMS+ST +TEH+N 
Sbjct: 61  LALADEVLSSIEEKKTAKEIWDHLTKLYEVTSLHNKIFLKRKLYTLRMSESTSVTEHLNT 120

Query: 121 L-------------------------------DQLVIDLTNSILTNYLNFEDIAAAILEK 180
           L                               DQL+I+LTNS +T+ + F+D+AAA+L++
Sbjct: 121 LNTLFSQLTSLRCTIGEQERVELLLQSLPDSYDQLIINLTNSNVTSIV-FDDVAAAVLQE 180

Query: 181 ENRRKNKVDKLASSQQAEAMVVTRGRSMEYGSEGSSEAVLLELNKKDFNPQGNVASTSNE 240
           ENRRKNK D+  + QQAEA+   RGRS E G   S             +  GN A++S++
Sbjct: 181 ENRRKNKEDRQVNLQQAEALTTMRGRSAERGQSSS-------------HKHGNTANSSDD 240

Query: 241 GDVLCCEAATTVE-GSVFSYDDHALKIVGIGTIKLKFHDNTVRTIQQVRHVEGLTRNLL- 300
           GD L CEA+TTVE GSV+S +DHAL+I+G+GTIKLK +D T++ ++ VRHV+GL +NLL 
Sbjct: 241 GDTLLCEASTTVEGGSVYSCNDHALEIIGVGTIKLKMYDGTIKVVRDVRHVKGLKKNLLS 300

Query: 301 ---------------------------LVGKRVATNLYMLEGKTLQEGEASVATKSPSEK 325
                                      L G+++A NLYML+G+TL E EASVA  S S  
Sbjct: 301 YGLLDNNASKIETRKGIMKVFHGALVVLKGEKIAANLYMLKGETLLEAEASVA--SCSSD 360

[Close]

BLAST of Moc09g13320 vs. ExPASy TrEMBL
Match: A0A5A7TUN0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002510 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 2.1e-91
Identity = 206/386 (53.37%), Postives = 245/386 (63.47%), Query Frame = 0


Query: 1   MTVKYDIEKFNGTNSSLWKMKMKAILRKDNCFAAISVRLVDVTDD-KWNEINGNVVANIH 60
           M  K+ IEKFNGTN SLWK+KMKAI RKDNC  AI  R  ++TDD KWNE++GN +ANIH
Sbjct: 1   MMTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIH 60

Query: 61  LALADKVLSSIEEKKTAKEIWDHLEMLYEARSLQNKIFLKRRLYTLRMSKSTQITEHINI 120
           LAL D VLSSIEEKK AKEIWDHL  LYEA+SL NKIFLKR+LYTLRMS ST +TEH+N 
Sbjct: 61  LALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKLYTLRMSGSTLMTEHMNT 120

Query: 121 L-------------------------------DQLVIDLTNSILTNYLNFEDIAAAILEK 180
           L                               DQLVI+LTN+ILT+YL+F+D+AA +LE+
Sbjct: 121 LNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEE 180

Query: 181 ENRRKNKVDKLASSQQAEAMVVTRGRSMEYGSEGSS------------------------ 240
           ENR KNK DKL SSQQAEA+ VTR R +E  S GS                         
Sbjct: 181 ENRCKNKEDKLVSSQQAEALTVTRVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHV 240

Query: 241 EAVLLELNKKDFNPQGNVASTSNEGDVLCCEAATTVEGSVFSYDDHALKIVGIGTIKLKF 300
           +    +LNKKDFNPQGNVAST NEG  L CEA TT+EG +   DD   K+V         
Sbjct: 241 KKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGQL---DDLDCKVV--------V 300

Query: 301 HDNTVRTIQQVRHVEGLTRNLLLVGKRVATNLYMLEGKTLQEGEASVATKSPSEKLSMIW 331
               ++ IQ           +L+  ++V  NLYMLEG+TLQEGEASVA+ S  E LSM+W
Sbjct: 301 EKRLMKVIQGAL--------VLMKRRKVDANLYMLEGETLQEGEASVASSSSGENLSMMW 360

The following BLAST results are available for this feature:

BLAST of Moc09g13320 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0026163.1	8.7e-100	51.99	Gag-Pol [Cucumis melo var. makuwa] >TYK11620.1 Gag-Pol [Cucumis melo var. makuwa...	[more]
BAD34493.1	3.8e-95	48.87	Gag-Pol [Ipomoea batatas]	[more]
KAE8686521.1	6.0e-93	47.87	Protein STRUBBELIG-RECEPTOR FAMILY 1 [Hibiscus syriacus]	[more]
KAE8702857.1	1.5e-91	52.21	Detected protein of unknown function [Hibiscus syriacus]	[more]
KAA0044949.1	4.3e-91	53.37	hypothetical protein E6C27_scaffold74G002510 [Cucumis melo var. makuwa]	[more]

BLAST of Moc09g13320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.3e-18	24.61	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.7e-10	26.61	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Moc09g13320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SNG9	4.2e-100	51.99	Gag-Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G00680 PE=4 S...	[more]
Q6BCY1	1.8e-95	48.87	Gag-Pol OS=Ipomoea batatas OX=4120 GN=Rtsp-1AA PE=4 SV=1	[more]
A0A6A2Z3I3	2.9e-93	47.87	Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig...	[more]
A0A6A3AGK4	7.2e-92	52.21	Integrase catalytic domain-containing protein OS=Hibiscus syriacus OX=106335 GN=...	[more]
A0A5A7TUN0	2.1e-91	53.37	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Moc09g13320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 334..365
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 47..146 e-value: 1.8E-18 score: 66.6
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 1..182
None	No IPR available	PANTHER	PTHR34676:SF6	SUBFAMILY NOT NAMED	coord: 1..182
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 275..330 e-value: 1.6E-8 score: 34.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g13320.1	Moc09g13320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0140096	catalytic activity, acting on a protein
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0043167	ion binding
molecular_function	GO:0097159	organic cyclic compound binding
molecular_function	GO:0016491	oxidoreductase activity