Moc09g13190 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g13190
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Locationchr9: 11181466 .. 11185001 (+)
RNA-Seq ExpressionMoc09g13190
SyntenyMoc09g13190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTATGCAAGAGTTTGCACAACGGTTCTTCACGAATCAAGCTCGAACCCGGTCTCCGGTTCCGACCTGAACACTAGAGTGGACCTGCACAAGAGGGTAAGCACTCCGACGCTCAAGTCAGTATAGATCGGACTCCGTATTTAGTTCGAGGTGAGATTTGATACCTGAGCGTGAAATGAAGTCCTCTATTTATAGGTGATGGATCCGACAGTATACACGACCGGCGGTTATATGTCTTTTCTCATGTTGAACCTGTCGGGTTCCAAGCAGGTCGAACTCAAGCCAGGTCGAACCTTGACGCCCATACTTAGCCTTTTATAATGGGCGAACCCGGTCTACTCGGCAGGACCGATGTGGACCTAGGTAATTTAAATTCAATTCTTCAAACACCAGTAGAGGTCCTCCACGTGTCCTGGGTGTATTTTACCCCCAAACATGACAGATTGAGAAAATGAAGCTTACAAATGATGAAAAAATAATGGTTTTTGATATGGGAGAAAATGAAGTAGAACACATTGATCGTCAGGCACAAAACTCTTTGGTTTGTAAGCTTCTAACAGAAAAGAATATTAAGGGAGAAGTCTTTAGGACTATGATGCCACGAATTTGGGCGAATGTTAGTGTTAAAAGTGAGATAGTGGAAAGGAACATATATCTGTGCAAATCTAAAAGCCAGAGGGACAAAAATAAAATCATCAACAATAGTCCATGGTTTTTTTATAAGCCATTGCTTCTGATGGAAGATCCGAGGGCACATTGAAATTTTAATGAATTGGAATTCAGGTATATTTCTTTTTGGGTAATTTTCATGAATTACCGTATGTTTGTTTTTCAAGGAGATTTGCAATAGCACTTGGGAACCTAGTTGGGAAGTTTGAAAAGGTGGATTCAGATGAGGAAGGAAAGTGTTGGGGACAATCTTTAAGAGTTAGAATTCAGATTGACGTCACTAAGCCTTTACGAAGAGGAGTTCTGATTAAGATCGGAACTATGGCTGACGAACGATGGATCCCCATAACTTACGAGAAGCTAACATCAATGGAGAAGCTCATGCGAGACTTTGTATGGAATGGCGGTAGTCATAGGCCAATTGGAAACCTTGTGAAGTGGTGATGGACAACCTTGCCTACTCAACAGGGAGGTCTAGGTGTAGGCTCCCTAGAGAAAAGAAGTATTGCTCTCCTCATGAAATGGTTGTGGCGCTTTGTCATTGAAAAAACACGTTTTTGGAGGAAAGTTATAGCAGCCATCTACGGGGAAGAGCCTTTTGGGTGGATGTCAAAGCCCTTAAAGAATTCTTGCATAAGCAGACCATGGATTGATGTTCAAGAAACTTCATCGGATTTTTGTAAGTTTACTTTTTACTAAGTGACTTTAGGGGAATCAGTGAGATCCTGGGAAGACACATGTATGGATTGACTCTTCTCTTTTGTCTGTTTCTTTCCTGGATCTGTATGCTATCTCTACCAAGAAGGAAAAGTTAATAGCGGACTGTTGGATTTCAGAGGCAATCACATGAGACATCGGAATGAGAAGGAACCTTTTTTATACAGAACTTGAGAGATGGGCGGTTTTTACCGGAAAGCTAGAAGGTGTGGTCATTGGCCAAGATAGTTATTCTTTATGGTGGAATGCGGACAACAAGGGTACTTTTTCTATGAAATCTGCTTTCCTTGCCATCACTTCTTCCCTCTCCCCCAAGCTGAATACAGCCACTACTTCCCTCATATGGAATTTCAAGGTCCCTAAGAAGGTAAAGTTTTTCCTTTGGACTCTATTTTATAGGGGAACAAATACTACCGATAAAATCCAAAGAAAGTTACCCTATTGGACTTTTTCCCCTTCAGTTTATGTCATGTGTGTTAACAATGTAGAAACGGTGGATCACTTTTTCCTCCATTGTACCTTTGCAACAAGGCTTGGAATTATGTGGCATCTCTCCTAAACCTCGCCCTCTGCATTCCGAAGAGAATTGATGATTTTGTTTCTGAAGGATTTGGTGGCTCAATGCTCAAAGGAAAAGCTTATGTTCTTTGGAATTGCACTACTAGAGCTCTTCTTTGACTGCTTTGGAAGGAACAGAACTATAGAGTTTTTGAAGAGAAAGAGACCTTTTTGACTCTTTTAGTGTGAATATAAAGCATACAACTTCTTAGTGGGCTTCGATCCATAAGAATGTTTTTTAACTATGGTTTCTCTTTTTATTTTACAGAGTTGGATTTCCTTGATTATATAGTTCCCTTGGGGAGGGTTTTCTCAACCCTCTGCCATTAGGCTGTTCTACTGCCTTTGGGCTTCTCTTCATTTTGAATACAATCTTTTCGTTTCTTATAAAAAAAAAAAAAAGCTACGAGACTTTTGCTATGGGTGCAGGAAACTTGACCTTGTATTAAAAGATTGTGTATGTCCAAGTGAAGAGGATGATGGTGATATGCAATATGACACATGGCTGAGAGAACCCTATAGACATAACAGGGGTGGAAGAACAGACGGGAGGGGATATTCAGACACCTTTCGAGGCAAAGGAAAAGGTCGGGCTCAACATTTTGGAAGTCAATTTCCAATAGTCTGTGATTCTATTCAGGACAGGTTAAGAAAAGGAAAGTTCTCTGCTGATTTAATGGGGCCAACGGAGCATATCAATAGGGTGAGTGAAGAATTGAATAATATTGCTACCAAAATTTTTTCTAAGGATTCGGTTATAGAGGATACTAGCTCAGGAGATATTAATGGAAAGCACACTCAGAATATCTTATTTACCCAATTTAATATCAATCAACCTGAGTCATAGGTAATAAAGAAGTTAATGGTGTCCGAAAAGCAGGGTTTTGAAAAGCAAGTAACAAAGACTACAAAAGCAGTGAAGACATGGAAAAGACACGTTCTCAAGGAGATAGAGACATTCCGGGATGTAACAGAAGCAAGGAAGGAAATTAGTCAGTTGATTGGTTCAAAACATCAACGGGATAATAATTTGGATTTAAAGGTTGTGAAGAGAATTTGTAGGCATGATAACACAGAAGAATGCTCTCAAACAATGGAGGTTATTGATCAGCCCCACAAACCACAATGAAAATCCTTAGTTAGAATTTTCGAGGATTGGGGAATCATCAAACATTGAGAGCCCTACGTTATTTGGTAAGTAGGGAGCGTCCCCAATTGGTCTTTCTAATGGAAACCAAATGTCATTTTCATTCAAAAGACAAAATAAAGGAAAGTTTGAATTTTGATTGTTGTGTTGGTGTTCCTAGTAATGGGAACTGCGGTGGACTTATGTTGTTTCGGAAGAAGGATTTGGATGTATGGTTGATGTCGTTTTCAATACATATAGATGTGCTTATATCGAAATCTAGTTGGCGATGGAGATTCACAGGTGTGTATGGTCACCCGGTGACTGAAAGAAGACAAGAAACTAGGGAATTATTGAAAAGACTTCATAGTGTTATGGAGTACCCCTTGATTCCAGGAGGCAATTTCAATGAAATTACAATGGATTCAAAAAGATGGGAGGGGCTGCAAGAAGAGCTAGCTTAA

mRNA sequence

ATGTTTATGCAAGAGTTTGCACAACGGTTCTTCACGAATCAAGCTCGAACCCGGTCTCCGGTGATGGATCCGACAGTATACACGACCGGCGGTTATATGTCTTTTCTCATGTTGAACCTGTCGGGTTCCAAGCAGGACCGATGTGGACCTAGGAGATTTGCAATAGCACTTGGGAACCTAGTTGGGAAGTTTGAAAAGGTGGATTCAGATGAGGAAGGAAAGTGTTGGGGACAATCTTTAAGAGTTAGAATTCAGATTGACGTCACTAAGCCTTTACGAAGAGGAGTTCTGATTAAGATCGGAACTATGGCTGACGAACGATGGATCCCCATAACTTACGAGAAGCTAACATCAATGGAGAAGCTCATGCGAGACTTTGGAGGTCTAGGTGTAGGCTCCCTAGAGAAAAGAAGTATTGCTCTCCTCATGAAATGGTTGTGGCGCTTTGTCATTGAAAAAACACGTTTTTGGAGGAAAGTTATAGCAGCCATCTACGGGGAAGAGCCTTTTGGGTGGATGTCAAAGCCCTTAAAGAATTCTTGCATAAGCAGACCATGGATTGATGTTCAAGAAACTTCATCGGATTTTTACATCGGAATGAGAAGGAACCTTTTTTATACAGAACTTGAGAGATGGGCGGTTTTTACCGGAAAGCTAGAAGGTGTGGTCATTGGCCAAGATAGTTATTCTTTATGGTGGAATGCGGACAACAAGGGTACTTTTTCTATGAAATCTGCTTTCCTTGCCATCACTTCTTCCCTCTCCCCCAAGCTGAATACAGCCACTACTTCCCTCATATGGAATTTCAAGGTCCCTAAGAAGGATTTGGTGGCTCAATGCTCAAAGGAAAAGCTTATGTTCTTTGGAATTGCACTACTAGAGCTCTTCTTTGACTGCTTTGGAAGGAACAGAACTATAGAGAAACTTGACCTTGTATTAAAAGATTGTGTATGTCCAAGTGAAGAGGATGATGGTGATATGCAATATGACACATGGCTGAGAGAACCCTATAGACATAACAGGGGTGGAAGAACAGACGGGAGGGGATATTCAGACACCTTTCGAGGCAAAGGAAAAGGTCGGGCTCAACATTTTGGAAGTCAATTTCCAATAGTCTGTGATTCTATTCAGGACAGGTTAAGAAAAGGAAAGTTCTCTGCTGATTTAATGGGGCCAACGGAGCATATCAATAGGGTAATAAAGAAGTTAATGGTGTCCGAAAAGCAGGGTTTTGAAAAGCAAGTAACAAAGACTACAAAAGCAGTGAAGACATGGAAAAGACACGTTCTCAAGGAGATAGAGACATTCCGGGATGTAACAGAAGCAAGGAAGGAAATTAGTCAGTTGATTGGTTCAAAACATCAACGGGATAATAATTTGGATTTAAAGGTTGTGAAGAGAATTTACAAAATAAAGGAAAGTTTGAATTTTGATTGTTGTGTTGGTGTTCCTAGTAATGGGAACTGCGGTGGACTTATGTTGTTTCGGAAGAAGGATTTGGATGTATGGTTGATGTCGTTTTCAATACATATAGATGTGCTTATATCGAAATCTAGTTGGCGATGGAGATTCACAGGTGTGTATGGTCACCCGGTGACTGAAAGAAGACAAGAAACTAGGGAATTATTGAAAAGACTTCATAGTGTTATGGAGTACCCCTTGATTCCAGGAGGCAATTTCAATGAAATTACAATGGATTCAAAAAGATGGGAGGGGCTGCAAGAAGAGCTAGCTTAA

Coding sequence (CDS)

ATGTTTATGCAAGAGTTTGCACAACGGTTCTTCACGAATCAAGCTCGAACCCGGTCTCCGGTGATGGATCCGACAGTATACACGACCGGCGGTTATATGTCTTTTCTCATGTTGAACCTGTCGGGTTCCAAGCAGGACCGATGTGGACCTAGGAGATTTGCAATAGCACTTGGGAACCTAGTTGGGAAGTTTGAAAAGGTGGATTCAGATGAGGAAGGAAAGTGTTGGGGACAATCTTTAAGAGTTAGAATTCAGATTGACGTCACTAAGCCTTTACGAAGAGGAGTTCTGATTAAGATCGGAACTATGGCTGACGAACGATGGATCCCCATAACTTACGAGAAGCTAACATCAATGGAGAAGCTCATGCGAGACTTTGGAGGTCTAGGTGTAGGCTCCCTAGAGAAAAGAAGTATTGCTCTCCTCATGAAATGGTTGTGGCGCTTTGTCATTGAAAAAACACGTTTTTGGAGGAAAGTTATAGCAGCCATCTACGGGGAAGAGCCTTTTGGGTGGATGTCAAAGCCCTTAAAGAATTCTTGCATAAGCAGACCATGGATTGATGTTCAAGAAACTTCATCGGATTTTTACATCGGAATGAGAAGGAACCTTTTTTATACAGAACTTGAGAGATGGGCGGTTTTTACCGGAAAGCTAGAAGGTGTGGTCATTGGCCAAGATAGTTATTCTTTATGGTGGAATGCGGACAACAAGGGTACTTTTTCTATGAAATCTGCTTTCCTTGCCATCACTTCTTCCCTCTCCCCCAAGCTGAATACAGCCACTACTTCCCTCATATGGAATTTCAAGGTCCCTAAGAAGGATTTGGTGGCTCAATGCTCAAAGGAAAAGCTTATGTTCTTTGGAATTGCACTACTAGAGCTCTTCTTTGACTGCTTTGGAAGGAACAGAACTATAGAGAAACTTGACCTTGTATTAAAAGATTGTGTATGTCCAAGTGAAGAGGATGATGGTGATATGCAATATGACACATGGCTGAGAGAACCCTATAGACATAACAGGGGTGGAAGAACAGACGGGAGGGGATATTCAGACACCTTTCGAGGCAAAGGAAAAGGTCGGGCTCAACATTTTGGAAGTCAATTTCCAATAGTCTGTGATTCTATTCAGGACAGGTTAAGAAAAGGAAAGTTCTCTGCTGATTTAATGGGGCCAACGGAGCATATCAATAGGGTAATAAAGAAGTTAATGGTGTCCGAAAAGCAGGGTTTTGAAAAGCAAGTAACAAAGACTACAAAAGCAGTGAAGACATGGAAAAGACACGTTCTCAAGGAGATAGAGACATTCCGGGATGTAACAGAAGCAAGGAAGGAAATTAGTCAGTTGATTGGTTCAAAACATCAACGGGATAATAATTTGGATTTAAAGGTTGTGAAGAGAATTTACAAAATAAAGGAAAGTTTGAATTTTGATTGTTGTGTTGGTGTTCCTAGTAATGGGAACTGCGGTGGACTTATGTTGTTTCGGAAGAAGGATTTGGATGTATGGTTGATGTCGTTTTCAATACATATAGATGTGCTTATATCGAAATCTAGTTGGCGATGGAGATTCACAGGTGTGTATGGTCACCCGGTGACTGAAAGAAGACAAGAAACTAGGGAATTATTGAAAAGACTTCATAGTGTTATGGAGTACCCCTTGATTCCAGGAGGCAATTTCAATGAAATTACAATGGATTCAAAAAGATGGGAGGGGCTGCAAGAAGAGCTAGCTTAA

Protein sequence

MFMQEFAQRFFTNQARTRSPVMDPTVYTTGGYMSFLMLNLSGSKQDRCGPRRFAIALGNLVGKFEKVDSDEEGKCWGQSLRVRIQIDVTKPLRRGVLIKIGTMADERWIPITYEKLTSMEKLMRDFGGLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVIAAIYGEEPFGWMSKPLKNSCISRPWIDVQETSSDFYIGMRRNLFYTELERWAVFTGKLEGVVIGQDSYSLWWNADNKGTFSMKSAFLAITSSLSPKLNTATTSLIWNFKVPKKDLVAQCSKEKLMFFGIALLELFFDCFGRNRTIEKLDLVLKDCVCPSEEDDGDMQYDTWLREPYRHNRGGRTDGRGYSDTFRGKGKGRAQHFGSQFPIVCDSIQDRLRKGKFSADLMGPTEHINRVIKKLMVSEKQGFEKQVTKTTKAVKTWKRHVLKEIETFRDVTEARKEISQLIGSKHQRDNNLDLKVVKRIYKIKESLNFDCCVGVPSNGNCGGLMLFRKKDLDVWLMSFSIHIDVLISKSSWRWRFTGVYGHPVTERRQETRELLKRLHSVMEYPLIPGGNFNEITMDSKRWEGLQEELA
Homology
[Close]
BLAST of Moc09g13190 vs. NCBI nr
Match: XP_022157437.1 (uncharacterized protein LOC111024135 [Momordica charantia])

HSP 1 Score: 95.1 bits (235), Expect = 2.1e-15
Identity = 47/105 (44.76%), Postives = 65/105 (61.90%), Query Frame = 0 

Query: 470 KIKESLNFDCCVGVPSNGNCGGLMLFRKKDLDVWLMSFSI-HIDVLISKSSWRWRFTGVY 529
           + K  L+FDCCV V S G  GGLML    D +V + S S  HID +I+     WRFTG Y
Sbjct: 46  RAKRELSFDCCVSVASTGKSGGLMLLWNSDSNVRIQSMSPGHIDSIITDKYGSWRFTGFY 105

Query: 530 GHPVTERRQETRELLKRLHSVMEYPLIPGGNFNEITMDSKRWEGL 574
           G+P T +R  + +LL+RL  +M+ P I GG+FNEI   +++  G+
Sbjct: 106 GNPCTYKRSASWKLLERLARMMDLPWIIGGDFNEIVSMTEKMGGV 150

[Close]
BLAST of Moc09g13190 vs. NCBI nr
Match: RVX09326.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 94.0 bits (232), Expect = 4.6e-15
Identity = 55/159 (34.59%), Postives = 79/159 (49.69%), Query Frame = 0 

Query: 124  RDFGGLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVIAAIYGEEPFGWMSKPLKNSCIS 183
            R+ GGLG G    R+ ALL KWLWRF  E++  W KVIA+IYG  P GW +  +      
Sbjct: 1021 REMGGLGFGKTSMRNNALLGKWLWRFPRERSGLWHKVIASIYGTHPNGWDANMVVRWSHR 1080

Query: 184  RPWIDVQETSSDF-------YIGMRRNLFYTELERWAVFTGKLEGVVIG-QDSYSLWWNA 243
             PW  + +   +F           RRNL  +E++        L  V++    S S  W+ 
Sbjct: 1081 CPWKAIAQVFQEFSPFVRLVNFNFRRNLTDSEIDLLQRLMSSLHSVLLSPSSSDSRAWSL 1140

Query: 244  DNKGTFSMKSAFLAITSSLSPKLNTATTSLIWNFKVPKK 275
             + G+FS+KS F A++   +P L       +W+ KVP K
Sbjct: 1141 SSSGSFSVKSFFYALSKDSNP-LVFLPAKFLWSSKVPSK 1178

[Close]
BLAST of Moc09g13190 vs. NCBI nr
Match: RVW41858.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 91.3 bits (225), Expect = 3.0e-14
Identity = 57/171 (33.33%), Postives = 80/171 (46.78%), Query Frame = 0 

Query: 124  RDFGGLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVIAAIYGEEPFGWMSKPL------ 183
            R+ GGLG G    R+ ALL KWLWRF  E++  W KVIA+IYG  P GW +  +      
Sbjct: 1103 REMGGLGFGKTSMRNSALLGKWLWRFPRERSGLWHKVIASIYGTHPNGWDANMVVRWSHR 1162

Query: 184  -------------KNSCISRPWIDVQETSSDFYIGMRRNLFYTELERWAVFTGKLEGVVI 243
                         K  C+  PW   Q     +    RRNL  +E++        L  V++
Sbjct: 1163 CPWKAIAQSYFCEKPYCLKCPW---QSFPLSWNFNFRRNLTDSEIDLLQRLMSSLHSVLL 1222

Query: 244  G-QDSYSLWWNADNKGTFSMKSAFLAITSSLSPKLNTATTSLIWNFKVPKK 275
                S S  W+  + G+FS+KS F A++   +P L       +W+ KVP K
Sbjct: 1223 SPSSSDSRAWSLSSSGSFSVKSFFYALSKDSNP-LMFLPAKFLWSSKVPSK 1269

[Close]
BLAST of Moc09g13190 vs. NCBI nr
Match: RVX15530.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 89.7 bits (221), Expect = 8.7e-14
Identity = 53/151 (35.10%), Postives = 79/151 (52.32%), Query Frame = 0 

Query: 124  RDFGGLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVIAAIYGEEPFGWMSKPLKNSCIS 183
            ++ GGLG G +  R+IALL KWLWRF  E++  W KVI +IYG  P GW +  +      
Sbjct: 1049 KELGGLGFGKISLRNIALLGKWLWRFPRERSGLWHKVIVSIYGTHPNGWDANMVVRWSHR 1108

Query: 184  RPWIDVQETSSDFYIGMRRNLFYTELERWAVFTGKLEGVVIGQDSYSLWWNADNKGTFSM 243
             PW  + +   +F + +R  +   E  R+    GK+ G +       L W+  + G FS+
Sbjct: 1109 CPWKAIAQVFQEFSLFVRLVVGNGERIRF----GKIFGGI-------LEWSLSSSGLFSV 1168

Query: 244  KSAFLAITSSLSPKLNTATTSLIWNFKVPKK 275
            KS FLA++   +P L       +W+ KVP K
Sbjct: 1169 KSFFLALSKVSNPIL-FLPAKFLWSSKVPSK 1187

[Close]
BLAST of Moc09g13190 vs. NCBI nr
Match: RVW68296.1 (Transposon Ty3-I Gag-Pol polyprotein [Vitis vinifera])

HSP 1 Score: 89.0 bits (219), Expect = 1.5e-13
Identity = 55/158 (34.81%), Postives = 78/158 (49.37%), Query Frame = 0 

Query: 124 RDFGGLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVIAAIYGEEPFGWMSKPLKNSCIS 183
           ++ GGLG G    R+IALL KWLWRF  E++  W KVIA+IYG  P GW +  +      
Sbjct: 297 KELGGLGFGKTSMRNIALLGKWLWRFPRERSGLWHKVIASIYGTHPNGWDANMVVRWSHR 356

Query: 184 RPWIDVQETSSDF--YIGMRRNLFYTELERWAVFTGKLEGVVIGQDSYSLWWNA-----D 243
            PW  + +   +F  Y+               +  G  E +   +D   LWW++      
Sbjct: 357 CPWKAIAQVFQEFSPYV--------------CLAVGNGERIRFWED---LWWDSRAWSLS 416

Query: 244 NKGTFSMKSAFLAITSSLSPKLNTATTSLIWNFKVPKK 275
           + G FSMKS FLA++   +P L    T  +W+ KVP K
Sbjct: 417 SSGLFSMKSFFLALSKVSNPILFLPAT-FLWSSKVPSK 436

[Close]
BLAST of Moc09g13190 vs. ExPASy TrEMBL
Match: A0A6J1DUG8 (uncharacterized protein LOC111024135 OS=Momordica charantia OX=3673 GN=LOC111024135 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-15
Identity = 47/105 (44.76%), Postives = 65/105 (61.90%), Query Frame = 0 

Query: 470 KIKESLNFDCCVGVPSNGNCGGLMLFRKKDLDVWLMSFSI-HIDVLISKSSWRWRFTGVY 529
           + K  L+FDCCV V S G  GGLML    D +V + S S  HID +I+     WRFTG Y
Sbjct: 46  RAKRELSFDCCVSVASTGKSGGLMLLWNSDSNVRIQSMSPGHIDSIITDKYGSWRFTGFY 105

Query: 530 GHPVTERRQETRELLKRLHSVMEYPLIPGGNFNEITMDSKRWEGL 574
           G+P T +R  + +LL+RL  +M+ P I GG+FNEI   +++  G+
Sbjct: 106 GNPCTYKRSASWKLLERLARMMDLPWIIGGDFNEIVSMTEKMGGV 150

[Close]
BLAST of Moc09g13190 vs. ExPASy TrEMBL
Match: A0A438JK40 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_102 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.2e-15
Identity = 55/159 (34.59%), Postives = 79/159 (49.69%), Query Frame = 0 

Query: 124  RDFGGLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVIAAIYGEEPFGWMSKPLKNSCIS 183
            R+ GGLG G    R+ ALL KWLWRF  E++  W KVIA+IYG  P GW +  +      
Sbjct: 1021 REMGGLGFGKTSMRNNALLGKWLWRFPRERSGLWHKVIASIYGTHPNGWDANMVVRWSHR 1080

Query: 184  RPWIDVQETSSDF-------YIGMRRNLFYTELERWAVFTGKLEGVVIG-QDSYSLWWNA 243
             PW  + +   +F           RRNL  +E++        L  V++    S S  W+ 
Sbjct: 1081 CPWKAIAQVFQEFSPFVRLVNFNFRRNLTDSEIDLLQRLMSSLHSVLLSPSSSDSRAWSL 1140

Query: 244  DNKGTFSMKSAFLAITSSLSPKLNTATTSLIWNFKVPKK 275
             + G+FS+KS F A++   +P L       +W+ KVP K
Sbjct: 1141 SSSGSFSVKSFFYALSKDSNP-LVFLPAKFLWSSKVPSK 1178

[Close]
BLAST of Moc09g13190 vs. ExPASy TrEMBL
Match: A0A438E2D1 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_1027 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.4e-14
Identity = 57/171 (33.33%), Postives = 80/171 (46.78%), Query Frame = 0 

Query: 124  RDFGGLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVIAAIYGEEPFGWMSKPL------ 183
            R+ GGLG G    R+ ALL KWLWRF  E++  W KVIA+IYG  P GW +  +      
Sbjct: 1103 REMGGLGFGKTSMRNSALLGKWLWRFPRERSGLWHKVIASIYGTHPNGWDANMVVRWSHR 1162

Query: 184  -------------KNSCISRPWIDVQETSSDFYIGMRRNLFYTELERWAVFTGKLEGVVI 243
                         K  C+  PW   Q     +    RRNL  +E++        L  V++
Sbjct: 1163 CPWKAIAQSYFCEKPYCLKCPW---QSFPLSWNFNFRRNLTDSEIDLLQRLMSSLHSVLL 1222

Query: 244  G-QDSYSLWWNADNKGTFSMKSAFLAITSSLSPKLNTATTSLIWNFKVPKK 275
                S S  W+  + G+FS+KS F A++   +P L       +W+ KVP K
Sbjct: 1223 SPSSSDSRAWSLSSSGSFSVKSFFYALSKDSNP-LMFLPAKFLWSSKVPSK 1269

[Close]
BLAST of Moc09g13190 vs. ExPASy TrEMBL
Match: A0A438K2W1 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_863 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.2e-14
Identity = 53/151 (35.10%), Postives = 79/151 (52.32%), Query Frame = 0 

Query: 124  RDFGGLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVIAAIYGEEPFGWMSKPLKNSCIS 183
            ++ GGLG G +  R+IALL KWLWRF  E++  W KVI +IYG  P GW +  +      
Sbjct: 1049 KELGGLGFGKISLRNIALLGKWLWRFPRERSGLWHKVIVSIYGTHPNGWDANMVVRWSHR 1108

Query: 184  RPWIDVQETSSDFYIGMRRNLFYTELERWAVFTGKLEGVVIGQDSYSLWWNADNKGTFSM 243
             PW  + +   +F + +R  +   E  R+    GK+ G +       L W+  + G FS+
Sbjct: 1109 CPWKAIAQVFQEFSLFVRLVVGNGERIRF----GKIFGGI-------LEWSLSSSGLFSV 1168

Query: 244  KSAFLAITSSLSPKLNTATTSLIWNFKVPKK 275
            KS FLA++   +P L       +W+ KVP K
Sbjct: 1169 KSFFLALSKVSNPIL-FLPAKFLWSSKVPSK 1187

[Close]
BLAST of Moc09g13190 vs. ExPASy TrEMBL
Match: A0A438G7W7 (Transposon Ty3-I Gag-Pol polyprotein OS=Vitis vinifera OX=29760 GN=TY3B-I_556 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.2e-14
Identity = 55/158 (34.81%), Postives = 78/158 (49.37%), Query Frame = 0 

Query: 124 RDFGGLGVGSLEKRSIALLMKWLWRFVIEKTRFWRKVIAAIYGEEPFGWMSKPLKNSCIS 183
           ++ GGLG G    R+IALL KWLWRF  E++  W KVIA+IYG  P GW +  +      
Sbjct: 297 KELGGLGFGKTSMRNIALLGKWLWRFPRERSGLWHKVIASIYGTHPNGWDANMVVRWSHR 356

Query: 184 RPWIDVQETSSDF--YIGMRRNLFYTELERWAVFTGKLEGVVIGQDSYSLWWNA-----D 243
            PW  + +   +F  Y+               +  G  E +   +D   LWW++      
Sbjct: 357 CPWKAIAQVFQEFSPYV--------------CLAVGNGERIRFWED---LWWDSRAWSLS 416

Query: 244 NKGTFSMKSAFLAITSSLSPKLNTATTSLIWNFKVPKK 275
           + G FSMKS FLA++   +P L    T  +W+ KVP K
Sbjct: 417 SSGLFSMKSFFLALSKVSNPILFLPAT-FLWSSKVPSK 436

The following BLAST results are available for this feature:
BLAST of Moc09g13190 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022157437.12.1e-1544.76uncharacterized protein LOC111024135 [Momordica charantia][more]
RVX09326.14.6e-1534.59LINE-1 retrotransposable element ORF2 protein [Vitis vinifera][more]
RVW41858.13.0e-1433.33putative ribonuclease H protein [Vitis vinifera][more]
RVX15530.18.7e-1435.10putative ribonuclease H protein [Vitis vinifera][more]
RVW68296.11.5e-1334.81Transposon Ty3-I Gag-Pol polyprotein [Vitis vinifera][more]
BLAST of Moc09g13190 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc09g13190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DUG81.0e-1544.76uncharacterized protein LOC111024135 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A438JK402.2e-1534.59LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF... [more]
A0A438E2D11.4e-1433.33Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_1027 ... [more]
A0A438K2W14.2e-1435.10Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_863 P... [more]
A0A438G7W77.2e-1434.81Transposon Ty3-I Gag-Pol polyprotein OS=Vitis vinifera OX=29760 GN=TY3B-I_556 PE... [more]
BLAST of Moc09g13190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 476..567

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g13190.1Moc09g13190.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090304 nucleic acid metabolic process
molecular_function GO:0003824 catalytic activity