Moc09g12670 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g12670
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPectinesterase
Locationchr9: 10813532 .. 10818729 (-)
RNA-Seq ExpressionMoc09g12670
SyntenyMoc09g12670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTATGCAAAGAATTGCACAATGCTGTTTAACGAACCAAGCTCGAACCCGGTCCCCGGCTCGACCTAAACTCAAGAGTGAACCTGCACAGGAGGGCAAACTCTCCGACGCTCAAGTCAGTATAAGTCGGACTCAATATTAAGTTCGAGGTGAGATTCGATACCTGAGCGTGAAATGAGGCCCTCTATTTATAGGTGGCGGGTCCGACAATACTCACAACTGGCGGTTACCTTTGTCCTTTTTCATGTCGAACCTGTCGGGATTGAGCAGATCGAACCCGTCCAGGTCGAACTGGGGCTTTTTACACTTAACCCCACGATGGGCGAAGCAAATCTCCTCGGCAGTTCGAGGTGGACCTGGGATATTTTATTCCTTGAATACCAATGAGCGTCTTCCACGTGTCCAAGGTATTTTTACCCCCAAACATTTGTGACAGTTTTCAATAAAGCTAACTACATGACTTATTATAAGCGTGTACTTCTCGATTATCAAGGTACCCTTTATGTGAGAGGATTGTTCTAATCTTATAAGGAGTGCGACGTAAATGGAAGCATCGACTTCATTTTTGGAGATGGGCTCGCAGTATTCCATGACTTCATTTTTGGAGATGGGCTCGCAGTATTCTAATCTTACATATATGCATGGGCATTTTGCACTATAGTCCAAATCTGACGCACATAAAGAGAGCAACTTCACCTTCCAAAACTACAACGTAATAGTGTCATCAGAGACACAGCCAGGCAAGGATCAAGTGATGGCGTCTCTTGGACGACCATGGAGGAGTTACTCCACCATTACTTTCATTGAGTCTTTCTTGGATGGACGGTAAGACACTACTAGACCTGTGTTTTATGTCAAGTACAACAATAGGAGTCTGGGAGCTCACACTTCTCAACTGGTGAAATAGCTAGGTTACTACGTGTTGCACAATAAAGAAGAATCCTCAAGATTTACCGTTGAAAGGCTTCATTGATGGACTTTCATGGATACTAGAAACTGGTATACCTTTTAGAACTTATTTACATGCATGAGTACTTTCTGTTTAATTGTGTCCTATGCTTATTATGTGGTTATGTATATGAAACATCATGTAAGTAGAATTTGAATATTTGATATTTTAATTATAATTATAATGCACTTTTCTTTGTTTAAACATTAATTAATATTACCGTTTTATGATATTAAAATGAATAGATATTAAAGTTAAACATGAACATAGATAGCAACCTACTGTCAACATGCACTCAATGCAACTATTTTAGAAGCAATACATAGTCGAAAAGATCAATCAATTTTAAAAAAGAAGTTAAATGAAATTGAATTGGAAAAAAAAAGGAAGAAGGTTAAAAATAGTAGTGAATATGTAAAGAAAAAAATTAGAAATGAAGGAGGCCAACAAAACTTTAATATACGAAAATTTAATAGATGGATTAAGGACTTAGTAAAAATGTAGTTGGATCATAAAACTATTTCAAGACTAAACAATTTGATAATATATAACAATATTTACTTTAGATTTAAAAAAAATGAACATGTACTTTACATAATTCCTCTGGCAATTTCTTATTTTTATTTCTCGCACAATTGGAAAAATTGGACTACGAAATACTTTATTGAACAGACCATTTTGAAACAGTTATGTATACGTATATATTATTATTAGATGATGTTTCAATTATTATTGGATTATGTTATTTGAATTAGAATATAATTTAGACCATTGAATTCGGTTTCCTATTAGAATTATGATTTTGAGATTTTATATTAGTATAAATAGGTTACTGTGCTTGTATTTAAAATTCAATTCAAGGAGTTAAAGAGTTTTGAGGTATCTTAAGGAAACTTTAAACCATGGTCTTTTCATTCCAAAATCATATAATTTGTCCTTGTTTACTTATAGAGATGCTGATTGGGCTTGTAATCCAGATGACAGAAAGTATAATAACCTAATATACAATTGCAATATAAGAGTAATAACTTATTTATACCAGTATAATCTTAAATAATAGTTCTAATAGAAAATCTGATTCAAATAATATAATGATATACTATATCCATACTTCAAATAACGTAATCTAATAATAATTCAAATAACATTATATAATAATATAATCTAACAAATGTGTGTGTATATATATATTATATAAGTATAAATGTTTCAAAATGGTATGCTTAATAAAGTTTTCCATAACACAATTTTTACAATTATGTATTGAGAAATAAAAATAAGAAATTGCCTAAAAAATTATGTAAAGTACATGTTATTATCAAATTGTTTAGTCTTGAAAAGGTTTTATTATCCAACTCAATTGATACTAAGACCTTAATCAAATTATTCATCATTTTTTCTGTATTTTAAAGATTTGGTGGCCTCATTCCTTTTTTATTTTGTTTCCATTTTCTAAAATAACTATGGAGTAGCTCCTCCACAGTCGTCCAAGAGACACCATCACTTGATCCTAGCTTGATTGTATTTATAACGTCTCACGTTCTCTGGCTAGTTTATTTTAAGACTTCATTTGTGCCTTTGAATTTTCCCTTCAGCTGTTAATTTAAACTTTTGGTTCTTCTTATTTTGAAGCTCTAGTTTTTGGGTAAATTAAAATTTGAGTTTAATTTCGTTAGTTAAAGATAAATTAAGTTTTCAATTTTTGGTGGAGATTTTAAATTAAATCTTATTTCAAGGATTTGGAAATGTAATTTTTCCCCTTTTGGATTTTATTTTTGGGTTTTAAAATTAAGTTAATCTCCTAAATAAATTTTCCAAACCTTTTTAAAATGGTTTTGGGCCATTAGATTTAATGGTATTACTTTGGTTTAATTGAAGATTGTTAAGTATAGATTTGTTGAAAAAATAATTTTAGCTTTCTTGTGACCCATGGTCTTTCTTTTAGATTTTGGGTAATTGAGCTTTCTTTTAGGTTGGGTAATTGGGTTTTCTAATTTTTCAAAACAGATTAAGTGGAAAAAGTTTGATTAAAAAAAAAAGTGATTAGTACATTATAGACCATTTTTTGGAGATAATAATTGGGGCAATTGCAGGAATGACTAAAATTAATAACGCGTTTTAAAAAATGTCCAAATCTATGAAATATTGTAATAATGACTAATTGATTTTTTCCGTTAAATTCTAAAATATTTTGTAGACAAATATAGCCTTGTAACCAATTAAGTATGTTGGATCGGTATGGCAACCCTAGAGGGGGGTGAATAGGGTTTAATTAACAAAATATAAACTTTTTAATAAATGGGCTCAATTTAAACAAAAATAATACACTTTTTGAGATGTGCAATTTTAACAAAGTAAGATAAAATAAATTTTAAGGCAAACAAGAGAAATTGAAAGCAAACAATCAAATTCTAAGATTAATTGCAAAAATAAATAAGAGAGAGGGTTAGAGAAATTTGACACCGGGAATTTTTATAGTGGTTCGGCACAACTGTCCTACTCCACTTCCCAAGCAGCTCTTGGGTTGTAAATTGAAATTCTGACTCTTTCCACGGTAGGAGTCAAACCGGTACACTACTCTTCACAAGAGCAAAAACGATCCTCTCCACGGTGAGGATCACACCGTTACAATGAGTTGAAGGTTTTGAAACACACACTTACAAACCCTCAAATAGAGTAAATATACAAATTTGAGCTCACAAAAATTTCAATCCTCACAACAATAAAATTTCTCTCACAAATAAGATGGAAAGAAAAATTGAGAACTTGGAGAGATTAGCAAAATGAAAATTTTGAAATTATGGAGGATTGAGAATAAGAGAATTGTTGTATAATTTTGAATGAGAAGTTTAGTTTAAATAGAGGGAAAAAATGGTAAAAAAAAATCAAGTTTAATTTTAAACCATTAGATCTTAATCATTAAGAATGAAGGGTTGAGATAATTTTGAAAAAAAAATTAAGAATAATATATATATAATAATGATAAAATAAAATAAAAAATATATATATAAAAAAGTGATGTGACAAGTTATTTTAATCATAAAATAACTTATATATATATATATATATATATGTGAGAAAACGGTAACTTTTCAAAAAAAAAATTTTTATTATTTTTTAAATTGACAGCATTCAATTTGAAAGTGACCTTTTTTTTTTAAACAAAGTTACCAACGGTAACTTTTAACTTTTTCTTTTTGAATTTTTTTTATTTTTTTATTTTTAATCTTTTTCTTTTCTTTTTCAATATATATATATATATATACTTTAAAAAGAAGCTTGTCACTTGTCAGCTTACGAACTGTCCACGTCATCTTCTCGGGTATTTTTTCTTCCAATTTGTTTCGATCGTAACTTCTCCGTTTGAGCTCCGATTTGGATGATCTAACAGTCGTTGGAATCTTTGTAACGAGCTCTACACTGTGGACACTTTAAAATACACAAAATGTCAATAAGTAAAATTAAGTTTGTTATCATCAAAACATTAATTAATTAATTTGAGATTAAGGCCAAAAAGCCAACAAAGTATATATGCATAATTTTAGGGATTTAGGATTTTTAACTAATAGCAAAAACAACGGGTCTTCATTTAAGGGAATCAATTTTATCTAATCAAATGAATGAAATTTAAATAATTAACTTAAATCTAATTTTAAATTGATAATCAGAATTTGAAAGTTAATTTAAGAAAAACTTATTAAAAATGTGTTGAGGTAGATTTTGAAATTTACCCCTCTAAAATTCCAAAATAAGGGGATAAATAAGATTATTACTAGATAAATGATAAAATTTACTTCTCACCTTTGACTTGAGTTAGAGAAGTTAGAGTTGTAGGAGTTCCCACCTTCTTCTCACATTTTGGTCTCACGCAACTTCATGCGCCCCACAGCCATCGTCTTCCTCATGAAGCAGATCTGCAAGCCACCATCCCGCCGCTCACCTTCAAGGCCACCATCCCGTCCCGCTGCTCACCTCACGAAGCAGATCAGTGCGCCGCTCACCTTCACGCCGCCATCCACGAACCAAAACCAAACCCGTCGCTGTCGCACCCAACTGCCACCACCCTCCCCGCTGGCTGCAACACGTACCATATCTGCTTGATGTGCCACGTCCCAAACCAGATCTACCGTCCCGTCGCCCGGCCAGATCCACCCAAGGCCGATACGATCCGTCGGCCACCCCAGACCAGATCCACCTACTGCCGCTTCGATATGTTTCCGATCTACCGCCCAACTTCCATCTTCTAG

mRNA sequence

ATGTTTATGCAAAGAATTGCACAATGCTGTTTAACGAACCAAGCTCGAACCCGGTCCCCGGCTCGACCTAAACTCAAGAGTGAACCTGCACAGGAGGGCAAACTCTCCGACGCTCAAGTCAGTGGCGGGTCCGACAATACTCACAACTGGCGGTTACCTTTGTCCTTTTTCATGTCGAACCTGTCGGGATTGAGCAGATCGAACCCGTCCAGGTCGAACTGGGGCTTTTTACACTTAACCCCACGATGGGCGAAGCAAATCTCCTCGGCAGTTCGAGGTGGACCTGGGATATTTTATTCCTTGAATACCAATGAGCGTCTTCCACGTGTCCAAGGTACCCTTTATTCCAAATCTGACGCACATAAAGAGAGCAACTTCACCTTCCAAAACTACAACGTAATAGTGTCATCAGAGACACAGCCAGGCAAGGATCAAGTGATGGCGTCTCTTGGACGACCATGGAGGAGTTACTCCACCATTACTTTCATTGAGTCTTTCTTGGATGGACGAGAAGTTAGAGTTGTAGGAGTTCCCACCTTCTTCTCACATTTTGGTCTCACGCAACTTCATGCGCCCCACAGCCATCGTCTTCCTCATGAAGCAGATCTGCAAGCCACCATCCCGCCGCTCACCTTCAAGGCCACCATCCCGTCCCGCTGCTCACCTCACGAAGCAGATCAGTGCGCCGCTCACCTTCACGCCGCCATCCACGAACCAAAACCAAACCCGTCGCTGTCGCACCCAACTGCCACCACCCTCCCCGCTGGCTGCAACACGTACCATATCTGCTTGATGTGCCACGTCCCAAACCAGATCTACCGTCCCGTCGCCCGGCCAGATCCACCCAAGGCCGATACGATCCGTCGGCCACCCCAGACCAGATCCACCTACTGCCGCTTCGATATGTTTCCGATCTACCGCCCAACTTCCATCTTCTAG

Coding sequence (CDS)

ATGTTTATGCAAAGAATTGCACAATGCTGTTTAACGAACCAAGCTCGAACCCGGTCCCCGGCTCGACCTAAACTCAAGAGTGAACCTGCACAGGAGGGCAAACTCTCCGACGCTCAAGTCAGTGGCGGGTCCGACAATACTCACAACTGGCGGTTACCTTTGTCCTTTTTCATGTCGAACCTGTCGGGATTGAGCAGATCGAACCCGTCCAGGTCGAACTGGGGCTTTTTACACTTAACCCCACGATGGGCGAAGCAAATCTCCTCGGCAGTTCGAGGTGGACCTGGGATATTTTATTCCTTGAATACCAATGAGCGTCTTCCACGTGTCCAAGGTACCCTTTATTCCAAATCTGACGCACATAAAGAGAGCAACTTCACCTTCCAAAACTACAACGTAATAGTGTCATCAGAGACACAGCCAGGCAAGGATCAAGTGATGGCGTCTCTTGGACGACCATGGAGGAGTTACTCCACCATTACTTTCATTGAGTCTTTCTTGGATGGACGAGAAGTTAGAGTTGTAGGAGTTCCCACCTTCTTCTCACATTTTGGTCTCACGCAACTTCATGCGCCCCACAGCCATCGTCTTCCTCATGAAGCAGATCTGCAAGCCACCATCCCGCCGCTCACCTTCAAGGCCACCATCCCGTCCCGCTGCTCACCTCACGAAGCAGATCAGTGCGCCGCTCACCTTCACGCCGCCATCCACGAACCAAAACCAAACCCGTCGCTGTCGCACCCAACTGCCACCACCCTCCCCGCTGGCTGCAACACGTACCATATCTGCTTGATGTGCCACGTCCCAAACCAGATCTACCGTCCCGTCGCCCGGCCAGATCCACCCAAGGCCGATACGATCCGTCGGCCACCCCAGACCAGATCCACCTACTGCCGCTTCGATATGTTTCCGATCTACCGCCCAACTTCCATCTTCTAG

Protein sequence

MFMQRIAQCCLTNQARTRSPARPKLKSEPAQEGKLSDAQVSGGSDNTHNWRLPLSFFMSNLSGLSRSNPSRSNWGFLHLTPRWAKQISSAVRGGPGIFYSLNTNERLPRVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLDGREVRVVGVPTFFSHFGLTQLHAPHSHRLPHEADLQATIPPLTFKATIPSRCSPHEADQCAAHLHAAIHEPKPNPSLSHPTATTLPAGCNTYHICLMCHVPNQIYRPVARPDPPKADTIRRPPQTRSTYCRFDMFPIYRPTSIF
Homology
[Close]
BLAST of Moc09g12670 vs. NCBI nr
Match: XP_022148123.1 (probable pectinesterase/pectinesterase inhibitor 39 [Momordica charantia])

HSP 1 Score: 77.0 bits (188), Expect = 3.2e-10
Identity = 41/75 (54.67%), Postives = 46/75 (61.33%), Query Frame = 0 

Query: 94  GPGIFYSLNTNERLPRVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRP 153
           G  IF   N   R+     T  SKS   + S FTFQN NV VS E Q  KDQV  SLGRP
Sbjct: 185 GLAIFQDCNVYARILGTTITAQSKSYKDQRSGFTFQNCNVTVSPEIQSIKDQVTVSLGRP 244

Query: 154 WRSYSTITFIESFLD 169
           WR+YST+ F+ESFLD
Sbjct: 245 WRNYSTVIFMESFLD 259

[Close]
BLAST of Moc09g12670 vs. NCBI nr
Match: XP_038889244.1 (probable pectinesterase/pectinesterase inhibitor 39 [Benincasa hispida])

HSP 1 Score: 76.3 bits (186), Expect = 5.4e-10
Identity = 40/77 (51.95%), Postives = 48/77 (62.34%), Query Frame = 0 

Query: 94  GPGIFYSLNTNERLPRVQGTLYSKSDAHKE--SNFTFQNYNVIVSSETQPGKDQVMASLG 153
           G  IF   N   RLP ++ T+ ++S   K+  S F FQN NV VSSE    KD+VM  LG
Sbjct: 198 GLTIFQDCNIFARLPSIESTVTAQSKNRKDDPSGFVFQNCNVTVSSEIASSKDKVMVFLG 257

Query: 154 RPWRSYSTITFIESFLD 169
           RPWR YS + FIESFLD
Sbjct: 258 RPWRKYSMVIFIESFLD 274

[Close]
BLAST of Moc09g12670 vs. NCBI nr
Match: XP_023002625.1 (probable pectinesterase/pectinesterase inhibitor 39 [Cucurbita maxima])

HSP 1 Score: 68.9 bits (167), Expect = 8.6e-08
Identity = 37/96 (38.54%), Postives = 54/96 (56.25%), Query Frame = 0 

Query: 97  IFYSLNTNERLPRVQGTL--YSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPW 156
           +F   N   RL  +Q T+   SK++  ++S F FQN  V VS E    +D+V+  LGRPW
Sbjct: 186 VFQDCNIYARLVDIQSTVTAQSKANLDEQSGFVFQNCTVTVSPEIASSRDKVLVFLGRPW 245

Query: 157 RSYSTITFIESFLDG-----REVRVVGVPTFFSHFG 186
           R+YS + F+ESFLD        +  +GVP    ++G
Sbjct: 246 RAYSMVAFVESFLDNVVQPKGWLEWLGVPVNLLYYG 281

[Close]
BLAST of Moc09g12670 vs. NCBI nr
Match: XP_023511662.1 (probable pectinesterase/pectinesterase inhibitor 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-07
Identity = 45/114 (39.47%), Postives = 57/114 (50.00%), Query Frame = 0 

Query: 94  GPGIFYSLNTNERLP--RVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLG 153
           G  +F   N   RLP   +  T  SK  +  +S F+FQN  V VS E    KD+V   LG
Sbjct: 182 GLAVFQDCNIYARLPSDEITVTAQSKDRSWWKSGFSFQNCTVTVSPEIASSKDKVKIYLG 241

Query: 154 RPWRSYSTITFIESFLDGRE-----VRVVGVP---TFFSHFGLTQLHAPHSHRL 198
           RPWR YST+ F+ESFLD        V   GVP    F++ F      A  +HR+
Sbjct: 242 RPWRQYSTVVFMESFLDDNVRPEGWVLWEGVPINNLFYAEFNNRGPGADTTHRV 295

[Close]
BLAST of Moc09g12670 vs. NCBI nr
Match: XP_022952993.1 (probable pectinesterase/pectinesterase inhibitor 7 [Cucurbita moschata])

HSP 1 Score: 66.6 bits (161), Expect = 4.3e-07
Identity = 35/77 (45.45%), Postives = 43/77 (55.84%), Query Frame = 0 

Query: 94  GPGIFYSLNTNERLP--RVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLG 153
           G  +F   N   RLP   +  T  SK  +  +S F+FQN  V VS E    K +V   LG
Sbjct: 182 GLAVFQDCNIYARLPMDEITVTAQSKEQSVSQSGFSFQNCTVTVSPEITANKTKVKIYLG 241

Query: 154 RPWRSYSTITFIESFLD 169
           RPWR YST+ F+ESFLD
Sbjct: 242 RPWREYSTVVFMESFLD 258

[Close]
BLAST of Moc09g12670 vs. ExPASy Swiss-Prot
Match: Q4PT34 (Probable pectinesterase 56 OS=Arabidopsis thaliana OX=3702 GN=PME56 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.4e-06
Identity = 24/56 (42.86%), Postives = 34/56 (60.71%), Query Frame = 0 

Query: 113 TLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD 169
           T  S+ +    S F+FQ  N+  SS+  P K  V   LGRPWR++S + F+ESF+D
Sbjct: 223 TAQSREEDTATSGFSFQKCNISASSDLTPIKGTVKTFLGRPWRAFSRVVFMESFID 278

[Close]
BLAST of Moc09g12670 vs. ExPASy TrEMBL
Match: A0A6J1D381 (Pectinesterase OS=Momordica charantia OX=3673 GN=LOC111016876 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-10
Identity = 41/75 (54.67%), Postives = 46/75 (61.33%), Query Frame = 0 

Query: 94  GPGIFYSLNTNERLPRVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRP 153
           G  IF   N   R+     T  SKS   + S FTFQN NV VS E Q  KDQV  SLGRP
Sbjct: 185 GLAIFQDCNVYARILGTTITAQSKSYKDQRSGFTFQNCNVTVSPEIQSIKDQVTVSLGRP 244

Query: 154 WRSYSTITFIESFLD 169
           WR+YST+ F+ESFLD
Sbjct: 245 WRNYSTVIFMESFLD 259

[Close]
BLAST of Moc09g12670 vs. ExPASy TrEMBL
Match: A0A6J1KPG6 (Pectinesterase OS=Cucurbita maxima OX=3661 GN=LOC111496427 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.2e-08
Identity = 37/96 (38.54%), Postives = 54/96 (56.25%), Query Frame = 0 

Query: 97  IFYSLNTNERLPRVQGTL--YSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPW 156
           +F   N   RL  +Q T+   SK++  ++S F FQN  V VS E    +D+V+  LGRPW
Sbjct: 186 VFQDCNIYARLVDIQSTVTAQSKANLDEQSGFVFQNCTVTVSPEIASSRDKVLVFLGRPW 245

Query: 157 RSYSTITFIESFLDG-----REVRVVGVPTFFSHFG 186
           R+YS + F+ESFLD        +  +GVP    ++G
Sbjct: 246 RAYSMVAFVESFLDNVVQPKGWLEWLGVPVNLLYYG 281

[Close]
BLAST of Moc09g12670 vs. ExPASy TrEMBL
Match: A0A6J1GM54 (Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111455508 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-07
Identity = 35/77 (45.45%), Postives = 43/77 (55.84%), Query Frame = 0 

Query: 94  GPGIFYSLNTNERLP--RVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLG 153
           G  +F   N   RLP   +  T  SK  +  +S F+FQN  V VS E    K +V   LG
Sbjct: 182 GLAVFQDCNIYARLPMDEITVTAQSKEQSVSQSGFSFQNCTVTVSPEITANKTKVKIYLG 241

Query: 154 RPWRSYSTITFIESFLD 169
           RPWR YST+ F+ESFLD
Sbjct: 242 RPWREYSTVVFMESFLD 258

[Close]
BLAST of Moc09g12670 vs. ExPASy TrEMBL
Match: A0A6J1HZD2 (Pectinesterase OS=Cucurbita maxima OX=3661 GN=LOC111468060 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.7e-07
Identity = 35/77 (45.45%), Postives = 43/77 (55.84%), Query Frame = 0 

Query: 94  GPGIFYSLNTNERLP--RVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLG 153
           G  +F   N   RLP   +  T  SK  +  +S F+FQN  V VS E    K +V   LG
Sbjct: 182 GLAVFQDCNIYARLPMDEITVTAQSKEQSISQSGFSFQNCTVTVSPEIAANKTKVKIYLG 241

Query: 154 RPWRSYSTITFIESFLD 169
           RPWR YST+ F+ESFLD
Sbjct: 242 RPWRPYSTVVFMESFLD 258

[Close]
BLAST of Moc09g12670 vs. ExPASy TrEMBL
Match: A0A6J1GIG0 (Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111454459 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.7e-07
Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = 0 

Query: 97  IFYSLNTNERLPRVQGTL--YSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPW 156
           +F   N   RL  +  T+   SK++  ++S F FQN  V VS E    +D+V+  LGRPW
Sbjct: 186 VFQDCNIYARLVDIHTTVTAQSKANLDEQSGFVFQNCTVTVSPEIASSRDKVLVFLGRPW 245

Query: 157 RSYSTITFIESFLDG-----REVRVVGVPTFFSHFG 186
           R+YS + F+ESFLD        +  +GVP    ++G
Sbjct: 246 RAYSMVAFVESFLDNVVQPKGWLEWLGVPVNLLYYG 281

[Close]
BLAST of Moc09g12670 vs. TAIR 10
Match: AT1G11370.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 4.5e-07
Identity = 24/56 (42.86%), Postives = 34/56 (60.71%), Query Frame = 0 

Query: 113 TLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD 169
           T  S+ +    S F+FQ  N+  SS+  P K  V   LGRPWR++S + F+ESF+D
Sbjct: 223 TAQSREEDTATSGFSFQKCNISASSDLTPIKGTVKTFLGRPWRAFSRVVFMESFID 278

[Close]
BLAST of Moc09g12670 vs. TAIR 10
Match: AT3G27980.1 (Plant invertase/pectin methylesterase inhibitor superfamily )

HSP 1 Score: 45.1 bits (105), Expect = 1.2e-04
Identity = 27/78 (34.62%), Postives = 40/78 (51.28%), Query Frame = 0 

Query: 113 TLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLDGREV 172
           T  S++    +S F+ QN N+  SS+       V   LGRPWR +ST+  ++SF+ G  V
Sbjct: 366 TAQSRATKDVKSGFSIQNCNITTSSDLDTA--TVKTYLGRPWRRFSTVAVLQSFI-GDLV 425

Query: 173 RVVGVPTFFSHFGLTQLH 191
              G   +    GL+ LH
Sbjct: 426 DPAGWTPWKGETGLSTLH 440

[Close]
BLAST of Moc09g12670 vs. TAIR 10
Match: AT4G03930.1 (Plant invertase/pectin methylesterase inhibitor superfamily )

HSP 1 Score: 44.7 bits (104), Expect = 1.6e-04
Identity = 27/78 (34.62%), Postives = 39/78 (50.00%), Query Frame = 0 

Query: 113 TLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLDGREV 172
           T  S+     +S F+ QN N+  SS+       V   LGRPWR +ST+  ++SF+ G  V
Sbjct: 393 TAQSRETKDDKSGFSIQNCNITASSDLDTA--TVKTYLGRPWRIFSTVAVLQSFI-GDLV 452

Query: 173 RVVGVPTFFSHFGLTQLH 191
              G   +    GL+ LH
Sbjct: 453 DPAGWTPWEGETGLSTLH 467

[Close]
BLAST of Moc09g12670 vs. TAIR 10
Match: AT4G02300.1 (Plant invertase/pectin methylesterase inhibitor superfamily )

HSP 1 Score: 43.1 bits (100), Expect = 4.7e-04
Identity = 18/60 (30.00%), Postives = 33/60 (55.00%), Query Frame = 0 

Query: 109 RVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD 168
           ++  T  S++ + + +  +  N  ++ + +  P K+   A LGRPWR YS    I+SF+D
Sbjct: 395 KIAFTAQSRNQSDQPTGISILNCRILAAPDLIPVKENFKAYLGRPWRKYSRTVIIKSFID 454

[Close]
BLAST of Moc09g12670 vs. TAIR 10
Match: AT1G11580.1 (methylesterase PCR A )

HSP 1 Score: 42.4 bits (98), Expect = 8.0e-04
Identity = 18/56 (32.14%), Postives = 29/56 (51.79%), Query Frame = 0 

Query: 113 TLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD 169
           T   + D ++ +  + Q   +  SS+  P K  V   LGRPW+ YS    ++SF+D
Sbjct: 424 TAQGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFID 479

The following BLAST results are available for this feature:
BLAST of Moc09g12670 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022148123.13.2e-1054.67probable pectinesterase/pectinesterase inhibitor 39 [Momordica charantia][more]
XP_038889244.15.4e-1051.95probable pectinesterase/pectinesterase inhibitor 39 [Benincasa hispida][more]
XP_023002625.18.6e-0838.54probable pectinesterase/pectinesterase inhibitor 39 [Cucurbita maxima][more]
XP_023511662.11.5e-0739.47probable pectinesterase/pectinesterase inhibitor 7 [Cucurbita pepo subsp. pepo][more]
XP_022952993.14.3e-0745.45probable pectinesterase/pectinesterase inhibitor 7 [Cucurbita moschata][more]
BLAST of Moc09g12670 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q4PT346.4e-0642.86Probable pectinesterase 56 OS=Arabidopsis thaliana OX=3702 GN=PME56 PE=2 SV=1[more]
BLAST of Moc09g12670 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D3811.5e-1054.67Pectinesterase OS=Momordica charantia OX=3673 GN=LOC111016876 PE=4 SV=1[more]
A0A6J1KPG64.2e-0838.54Pectinesterase OS=Cucurbita maxima OX=3661 GN=LOC111496427 PE=4 SV=1[more]
A0A6J1GM542.1e-0745.45Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111455508 PE=4 SV=1[more]
A0A6J1HZD22.7e-0745.45Pectinesterase OS=Cucurbita maxima OX=3661 GN=LOC111468060 PE=4 SV=1[more]
A0A6J1GIG02.7e-0737.50Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111454459 PE=4 SV=1[more]
BLAST of Moc09g12670 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G11370.14.5e-0742.86Pectin lyase-like superfamily protein [more]
AT3G27980.11.2e-0434.62Plant invertase/pectin methylesterase inhibitor superfamily [more]
AT4G03930.11.6e-0434.62Plant invertase/pectin methylesterase inhibitor superfamily [more]
AT4G02300.14.7e-0430.00Plant invertase/pectin methylesterase inhibitor superfamily [more]
AT1G11580.18.0e-0432.14methylesterase PCR A [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000070Pectinesterase, catalyticPFAMPF01095Pectinesterasecoord: 114..189
e-value: 6.3E-8
score: 31.7
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 97..184
e-value: 4.1E-6
score: 28.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..46

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g12670.1Moc09g12670.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042545 cell wall modification
molecular_function GO:0030599 pectinesterase activity