Moc09g12500 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g12500
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein SPIRRIG
Locationchr9: 10701028 .. 10703384 (-)
RNA-Seq ExpressionMoc09g12500
SyntenyMoc09g12500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATCGGAACATAGCCCTACTCCTCCGACAATTGAAACAGCAGGAAGTAAGGCTACCTATACTCATAAGGGATCTACGGAAGGGCAAATCCCCAGAATTGGACGAGGTTGATGAGTCGACCAATAATGGTCAAAGCAAACTGAAGTTAGGAGGGAACGACAAACGGCGGACTAGAATCTTTGATCGATTAGGTCAACAGCCGAGGTCTACAATACATGGTGGGGGCAAGGACCATCAAGACGATCGAGAAGACCTCGGACCTATTGATCTTGACAAAGAAAAGCTGCTAGATCGACTCGAACCGTTAGAGAAGTGGCAAGCGAGAAAGAGAAAGGGTTCGATCTTGAAGAATTGATAGACCAGATAGACTCTCCATTTATGGAAGAGATAATGGGAGAGAAAGTTCCCCTGAAGTTTAAAACTCCCGGTCATAAAGTAGTATGATGGTTCGACAGACTTGGTTGACCACCTTGACGCGTACCGCGAATGGATGGATATCTACAGAGTAACAGAGGCGATTAAGTGTTGAGTTTTCTCCTTTACCATGAGCGGCTCAGCTCGGGTCTAGTTTCAATAGTTGAAAAGAGTGTCAATCTTGAGTTTCAAAAAATTGGCTAGGGCGTTTGTCACTCAATTTGTGGGAGGGCGAAACAGAAGTCAACCAGTGGTATACCTCTTTACTATAACGCAAGGTCGACAGAAAGCCTCAAAGATTACGTGGCTCGGTTTAATGAAGAAAAGCTACAGGTTGAGGGTTTTATAGAGATGCAGTGTCGCTTCTGGCTTTTATGTCTGGCGTAAAGGATGAGCACCTGGCATTCTCGTTTGGGAAGAAAACCCCAAGCACCTTTTCGGAGGCATTGAGCTGACCCGAAAAATACACTAGTGCTGGGGAGTTCTTTCATTCAAAACGGAATCCTCAAGGAAAACGTGCCGAGTAGAGTGCAAAGACATAGAGATCTGGAGAAAAACAATAGGTATCGAGATGGGAGAAAGCAGACACTAAGCAGGATCGAACCAGCCAAAGGGATAGACCTAAAAAATTAGAAAAGTATACCCCGACAACGTTTCCGCCTGAACAAATTTTAATGGAGATGAAAGACCAAAGGTTGCTTAGATGGTTTGAAAAGATGAAAGCGCCACCCAACAAAAGAAGTAAGGGACAATATTTCCTATTTCACCGAGATCATGGCCACACGACGCAAGATTGCTTCAACCTAGGAGAAGAAGTGGAAGATCTCACTCGAAGGGGATACCTCAAAGAATATATAGAGGACCCTAAGGCGACTTCGAACAATGAGCACAACGACAAGTCCCCCACCAAAGAAATAAGAAAGATACAAGAAGGCCTTGCAGAAAGAGAATCGGGCAGGAAGAGAAAGACAAGTGCTTGAGAAGCTAGAATTTAAGGGGATGTGAATCTTAGAGCGGAAGCAGTAGAACACGTTCTTGTAATTCTTTTGAAATTTAAAACACAGAAAAATATAAAATAAGGAAGAATGTTGAATTTTACCTTTGAAGATTATTCTTCGTGTGATCCCAATGAGACAACACTACTTGATCTTCCTTGCTATATCTCTCAGTCGAGAATCCGGATTGTGGGATACAATTGCAAAGGATCGAGAGAGTAAGAGAGTTGAGAGATTTCAAACATTTTTCATCCCTTCAGGGTTCAGCTTACTGTTATATTTATCGAGAGAGAAAATCATAAGACCATTAGGATATCTTATCCTTTTGGATATAGGATATCTTCTACTGAATCTAGGGGAAATCCCAATGTGGGTACTCTGTCCTAAAACTCGTAGTTTGTAAATAGTGAACATTAATGTGAGGTTATTTGACAAATGTTGTTAAATGAAAGTGAATTTGTTTTTTAATAAATCCAATAAACTACGAACCCTTGGCTATTATAATGAGTACTTGGACTTTATGTGGAGACATAAACTGGATCAAGTTCAAGTAAATAGCCTAAACAGTCTATAGTACATGGATCAAGTTGGGTACTTTATCCTGGAGACACTATTGAATACGGCCCGCTTTATGATAGTTACAAATGTTGTAAGGTGTCATAAACGAAGTGATCCTGATTCGTTCGTGTAGAAACATGTGAGCGGGGGTGTTCTACACAATGAGATTGTGTAAGACTGACCCTGAAATAATCACTGTTACGTATTAACACCGTTTACGGATAACACTGATTAATTTCGTTTATCGATGACCTAAATAACTTGATTTAAATCCTGAGCCATCTATGAACTCCTATTTATTCAGGATTCTCCCTTGATCTGTATAGGTGAGAGTAAGCTCATCAGCGCTGCTCAATATGCCTCCCATTTCAGGGATAAGACTGGGTAG

mRNA sequence

ATGTATCGGAACATAGCCCTACTCCTCCGACAATTGAAACAGCAGGAAGTAAGGCTACCTATACTCATAAGGGATCTACGGAAGGGCAAATCCCCAGAATTGGACGAGGTTGATGAGTCGACCAATAATGGTCAAAGCAAACTGAAGTTAGGAGGGAACGACAAACGGCGGACTAGAATCTTTGATCGATTAGGTCAACAGCCGAGGTCTACAATACATGGTGGGGGCAAGGACCATCAAGACGATCGAGAAGACCTCGGACCTATTGATCTTGACAAAGAAAAGCTGCTAGATCGACTCGAACCGTTAGAGAAGTGGCAAGCGAGAAAGAGAAAGGGTGAGAGTAAGCTCATCAGCGCTGCTCAATATGCCTCCCATTTCAGGGATAAGACTGGGTAG

Coding sequence (CDS)

ATGTATCGGAACATAGCCCTACTCCTCCGACAATTGAAACAGCAGGAAGTAAGGCTACCTATACTCATAAGGGATCTACGGAAGGGCAAATCCCCAGAATTGGACGAGGTTGATGAGTCGACCAATAATGGTCAAAGCAAACTGAAGTTAGGAGGGAACGACAAACGGCGGACTAGAATCTTTGATCGATTAGGTCAACAGCCGAGGTCTACAATACATGGTGGGGGCAAGGACCATCAAGACGATCGAGAAGACCTCGGACCTATTGATCTTGACAAAGAAAAGCTGCTAGATCGACTCGAACCGTTAGAGAAGTGGCAAGCGAGAAAGAGAAAGGGTGAGAGTAAGCTCATCAGCGCTGCTCAATATGCCTCCCATTTCAGGGATAAGACTGGGTAG

Protein sequence

MYRNIALLLRQLKQQEVRLPILIRDLRKGKSPELDEVDESTNNGQSKLKLGGNDKRRTRIFDRLGQQPRSTIHGGGKDHQDDREDLGPIDLDKEKLLDRLEPLEKWQARKRKGESKLISAAQYASHFRDKTG
Homology
[Close]
BLAST of Moc09g12500 vs. NCBI nr
Match: XP_022145129.1 (uncharacterized protein LOC111014646 [Momordica charantia])

HSP 1 Score: 76.6 bits (187), Expect = 1.7e-10
Identity = 49/115 (42.61%), Postives = 70/115 (60.87%), Query Frame = 0 

Query: 1   MYRNIALLLRQLKQQEVRLPILIRDLRKGKSPELDEVDESTNNGQSKLKLGGNDKRRTRI 60
           M + +  +LRQ ++QE     L+RD RKGK P   E +ESTN+  SKL++GGN +RRT+I
Sbjct: 71  MLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRIGGNTRRRTQI 130

Query: 61  FD--RLGQQPRSTIHGGGKDHQDDREDLGPIDLDKEKLLDRLEPLEKWQARKRKG 114
           FD  ++ +Q + +   GG+   DDR    P+ LDK K  D+ E  EK   +K KG
Sbjct: 131 FDSQKMKKQHKYSAPNGGRSDHDDRNS-EPVSLDKGKPADQPESSEKRHNQKEKG 184

[Close]
BLAST of Moc09g12500 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 72.8 bits (177), Expect = 2.5e-09
Identity = 45/94 (47.87%), Postives = 58/94 (61.70%), Query Frame = 0 

Query: 22  LIRDLRKGKSPELDEVDESTNNGQSKLKLGGNDKRRTRIFD--RLGQQPRSTIHGGGKDH 81
           L+RD +KGK P   + +ESTN+  SKL++GGN ++RTRIFD  +  +Q +S    GGK  
Sbjct: 74  LVRDPKKGKGPTESDTEESTNSVGSKLRIGGNTRQRTRIFDPRKTKKQHKSPAPNGGKSD 133

Query: 82  QDDREDLGPIDLDKEKLLDRLEPLEKWQARKRKG 114
            DDR    PI LDK K  DR E  EK  + K KG
Sbjct: 134 HDDRNS-EPISLDKGKPADRPESSEKRHSHKEKG 166

[Close]
BLAST of Moc09g12500 vs. NCBI nr
Match: XP_022155816.1 (protein SPIRRIG [Momordica charantia])

HSP 1 Score: 68.2 bits (165), Expect = 6.2e-08
Identity = 45/97 (46.39%), Postives = 60/97 (61.86%), Query Frame = 0 

Query: 22  LIRDLRKGKSPELDEVDESTNNGQSKLKLGGNDKRRTRIFDRLGQ-----QPRSTIHGGG 81
           L R  RKGK P   E +ESTN+  S+L+L  N KRRT+ FD  GQ     Q +S +  GG
Sbjct: 13  LFRGPRKGKGPIESESEESTNSVGSRLRLEENIKRRTQNFDSRGQQKDKKQQKSPVPDGG 72

Query: 82  KDHQDDREDLGPIDLDKEKLLDRLEPLEKWQARKRKG 114
           K +  D+++  PIDLDK+K  DR E  E+ Q++K KG
Sbjct: 73  KSNH-DKQNAEPIDLDKDKSTDRPELSERQQSKKEKG 108

[Close]
BLAST of Moc09g12500 vs. ExPASy TrEMBL
Match: A0A6J1CUA7 (uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014646 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 8.4e-11
Identity = 49/115 (42.61%), Postives = 70/115 (60.87%), Query Frame = 0 

Query: 1   MYRNIALLLRQLKQQEVRLPILIRDLRKGKSPELDEVDESTNNGQSKLKLGGNDKRRTRI 60
           M + +  +LRQ ++QE     L+RD RKGK P   E +ESTN+  SKL++GGN +RRT+I
Sbjct: 71  MLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRIGGNTRRRTQI 130

Query: 61  FD--RLGQQPRSTIHGGGKDHQDDREDLGPIDLDKEKLLDRLEPLEKWQARKRKG 114
           FD  ++ +Q + +   GG+   DDR    P+ LDK K  D+ E  EK   +K KG
Sbjct: 131 FDSQKMKKQHKYSAPNGGRSDHDDRNS-EPVSLDKGKPADQPESSEKRHNQKEKG 184

[Close]
BLAST of Moc09g12500 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.2e-09
Identity = 45/94 (47.87%), Postives = 58/94 (61.70%), Query Frame = 0 

Query: 22  LIRDLRKGKSPELDEVDESTNNGQSKLKLGGNDKRRTRIFD--RLGQQPRSTIHGGGKDH 81
           L+RD +KGK P   + +ESTN+  SKL++GGN ++RTRIFD  +  +Q +S    GGK  
Sbjct: 74  LVRDPKKGKGPTESDTEESTNSVGSKLRIGGNTRQRTRIFDPRKTKKQHKSPAPNGGKSD 133

Query: 82  QDDREDLGPIDLDKEKLLDRLEPLEKWQARKRKG 114
            DDR    PI LDK K  DR E  EK  + K KG
Sbjct: 134 HDDRNS-EPISLDKGKPADRPESSEKRHSHKEKG 166

[Close]
BLAST of Moc09g12500 vs. ExPASy TrEMBL
Match: A0A6J1DSV3 (protein SPIRRIG OS=Momordica charantia OX=3673 GN=LOC111022848 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.0e-08
Identity = 45/97 (46.39%), Postives = 60/97 (61.86%), Query Frame = 0 

Query: 22  LIRDLRKGKSPELDEVDESTNNGQSKLKLGGNDKRRTRIFDRLGQ-----QPRSTIHGGG 81
           L R  RKGK P   E +ESTN+  S+L+L  N KRRT+ FD  GQ     Q +S +  GG
Sbjct: 13  LFRGPRKGKGPIESESEESTNSVGSRLRLEENIKRRTQNFDSRGQQKDKKQQKSPVPDGG 72

Query: 82  KDHQDDREDLGPIDLDKEKLLDRLEPLEKWQARKRKG 114
           K +  D+++  PIDLDK+K  DR E  E+ Q++K KG
Sbjct: 73  KSNH-DKQNAEPIDLDKDKSTDRPELSERQQSKKEKG 108

The following BLAST results are available for this feature:
BLAST of Moc09g12500 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022145129.11.7e-1042.61uncharacterized protein LOC111014646 [Momordica charantia][more]
XP_022158830.12.5e-0947.87uncharacterized protein LOC111025293 [Momordica charantia][more]
XP_022155816.16.2e-0846.39protein SPIRRIG [Momordica charantia][more]
BLAST of Moc09g12500 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc09g12500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CUA78.4e-1142.61uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A6J1DWY01.2e-0947.87uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DSV33.0e-0846.39protein SPIRRIG OS=Momordica charantia OX=3673 GN=LOC111022848 PE=4 SV=1[more]
BLAST of Moc09g12500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g12500.1Moc09g12500.1mRNA