Moc09g10300 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g10300
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDUF4219 domain-containing protein
Locationchr9: 8712303 .. 8714167 (+)
RNA-Seq ExpressionMoc09g10300
SyntenyMoc09g10300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATCGAGCATCAAGGTTCTTTATCTTGTGTTTGAGTTTCGTGCTCGGTGTTTGAGTCTAGTGCTCATGAAGATGAACGGTGGAAGCAATGTTTGTGTAGATAAGCTTACCGGTGATAATGGGTGGCTACTGGAGGCTACGATGGAAGTTTTTCTACCAGGGCAATATTTGTGGGATCTTATATCTGGTGAAGATAGTGTAATTTCAGATGATACTCCACAAAATGCTGAGGTACAAAGGAAGTGGAAGATCAAATGTGGCAAAGCTTTATTTGCTTTGCGAACTTCTATCTTCAAGGAGTATATCGAGCATGTTCGTGATATAGATTCTCCAAAGGAAGTGTGAGATACACTTGAAAGGTTGTTCATTCATAAGAACACGACGAGGTTGCAGTATTTGGAGAATGAACTTGCTAGAAAAACTCAAGGTAATTTATCAGTTTCAAAGGATTTTCTAAAAGTTAAAACTTTGTGTTATGAAATTTCAGAATTGGACAAGGAGGAACCCATTAGGGATGTTCGTTTGCGTCGGTATCTTATTCGTGGACAGCGAAAGGAGTTTATGTCGTTTATTTCTTCAATACAAGGTTGGGTAAATCAACCTTCTATCATTGAGTTGGAAAATTTGTTATCAAATCAGGAAGCCTTGATGAAAGAAATGCTTGGTGACAACAAGTGATCTTCTCTCAAAGTAGAAGGTATTCTTTATACAAGAGACAAAGTAGAAAGAAGTTATGTTTTTTAATGTTCTTCAAATGATAGCAAGCATTTTGGAAATGAAAGGCAGTCCAAAGGTAATTCGAAAGGATGTTTTAGGTGAGGAAAGTCGGGACATATCAAACGTGATTATCGGGTGAAGGTGGTATCTAGTCGATGTGGGAAACCAGGCCATATTAAACAAAATTGTCAAGTGAAACTTAAAGAAGCAGAAGCAGATGTTGTACAGGAAATTAACAAGCCTAAACAACTCAATTGGGAACATTGTTTTATAAATTGAAGTTGTTGATCGACTTGTTAATTATTGTACTGATACTTCTTTTGGTTATAGTGAGGATTGGTCTGATGGTTCTGGTTGTTTTCATCATACTATTGAAGGATGTATCTCTTCTTTCTAATGTTTGTGGAAGAAGAGTCAATAAGCAGCGGCTAATAATTCCTTACATCCGGATGTGGAAGAAGGACACGTCAATATTGAAAATTGTGAATTGGGCAATGTTCCTCATAAATGTGGTTGCTATAGTCCAAATTTGAAGGAGACTTTTATTTTAGTCTCTCAGTTTGCTGATGTTGGGAGTGTTTCTGGAAACAAGTTGAGTTGTGGCAGAAATTCTGCACATTCTTGTGCTAAAGATGGTACAAGTTTAAATTGTTTAAATAATCTGAAGGTTAGCCTTATAGCTGGACTTAATGCTGGGTTAATATTTGTTCTTTTGGTCGGACTATTGTTTTTCTGCAAGGGTACCTATAAAAGCTACAGATACGAAGTCTTTGTAGATGTTGCAGGTGAAAGGATTTGCATGGAAAGAGAGCTTTAAAGGAGATGCTTTCCAATATGAGGATTTGAGTGCTGTCTACCGTCCTTGAGAACTTAAGCTTGAGAAACTTACTTTGGATTGACCTACTCGAAGGTGTGTGTCATTGGACACAACTCAAGGTTTCAAGTATTTTTGTGAAAGTTGCAATCCAAAAATTACTTATCAAGGTGTTGTGGTTGCTAATATATTTCTTGATGAAGATTTTGAAGCGTTTGTTGATGATTTTGGCCTAATGAAGTCGATTGGTGTTAGCATGACTTATGTCACTCAAGTTTCTGAGATAATGGGTCATATTGAATTGAAGTATTTATTTACTGGAGAATCTTGA

mRNA sequence

ATGGTATCGAGCATCAAGGTTCTTTATCTTGTGTTTGAGTTTCGTGCTCGGTGTTTGAGTCTAGTGCTCATGAAGATGAACGGTGGAAGCAATGTTTGTGTAGATAAGCTTACCGGTGATAATGGGTGGCTACTGGAGGCTACGATGGAAGTTTTTCTACCAGGGCAATATTTGTGGGATCTTATATCTGGTGAAGATAGTGTAATTTCAGATGATACTCCACAAAATGCTGAGGTACAAAGGAAGTGGAAGATCAAATGTGGCAAAGCTTTATTTGCTTTGCGAACTTCTATCTTCAAGGAGTATATCGAGCATGTTCGTGATATAGATTCTCCAAAGGAAGTTCCAAATTTGAAGGAGACTTTTATTTTAGTCTCTCAGTTTGCTGATGTTGGGAGTGTTTCTGGAAACAAGTTGAGTTGTGGCAGAAATTCTGCACATTCTTGTGCTAAAGATGATTTTGAAGCGTTTGTTGATGATTTTGGCCTAATGAAGTCGATTGGTGTTAGCATGACTTATGTCACTCAAGTTTCTGAGATAATGGGTCATATTGAATTGAAGTATTTATTTACTGGAGAATCTTGA

Coding sequence (CDS)

ATGGTATCGAGCATCAAGGTTCTTTATCTTGTGTTTGAGTTTCGTGCTCGGTGTTTGAGTCTAGTGCTCATGAAGATGAACGGTGGAAGCAATGTTTGTGTAGATAAGCTTACCGGTGATAATGGGTGGCTACTGGAGGCTACGATGGAAGTTTTTCTACCAGGGCAATATTTGTGGGATCTTATATCTGGTGAAGATAGTGTAATTTCAGATGATACTCCACAAAATGCTGAGGTACAAAGGAAGTGGAAGATCAAATGTGGCAAAGCTTTATTTGCTTTGCGAACTTCTATCTTCAAGGAGTATATCGAGCATGTTCGTGATATAGATTCTCCAAAGGAAGTTCCAAATTTGAAGGAGACTTTTATTTTAGTCTCTCAGTTTGCTGATGTTGGGAGTGTTTCTGGAAACAAGTTGAGTTGTGGCAGAAATTCTGCACATTCTTGTGCTAAAGATGATTTTGAAGCGTTTGTTGATGATTTTGGCCTAATGAAGTCGATTGGTGTTAGCATGACTTATGTCACTCAAGTTTCTGAGATAATGGGTCATATTGAATTGAAGTATTTATTTACTGGAGAATCTTGA

Protein sequence

MVSSIKVLYLVFEFRARCLSLVLMKMNGGSNVCVDKLTGDNGWLLEATMEVFLPGQYLWDLISGEDSVISDDTPQNAEVQRKWKIKCGKALFALRTSIFKEYIEHVRDIDSPKEVPNLKETFILVSQFADVGSVSGNKLSCGRNSAHSCAKDDFEAFVDDFGLMKSIGVSMTYVTQVSEIMGHIELKYLFTGES
Homology
[Close]
BLAST of Moc09g10300 vs. NCBI nr
Match: KAA8540328.1 (hypothetical protein F0562_024753 [Nyssa sinensis])

HSP 1 Score: 132.5 bits (332), Expect = 3.9e-27
Identity = 62/90 (68.89%), Postives = 74/90 (82.22%), Query Frame = 0 

Query: 26  MNGGSNVCVDKLTGDNGWLLEATMEVFLPGQYLWDLISGEDSVISDDTPQNAEVQRKWKI 85
           MNGGS+V +DKL G+N    +  ME +L GQ LWDLISG+D VI +DTPQNAE++RKWKI
Sbjct: 1   MNGGSSVSIDKLVGNNYSYWKLCMEAYLQGQDLWDLISGDDVVIPEDTPQNAELRRKWKI 60

Query: 86  KCGKALFALRTSIFKEYIEHVRDIDSPKEV 116
           KCGKALFALRTSI +EYI+HVRD  SPK+V
Sbjct: 61  KCGKALFALRTSISQEYIQHVRDGKSPKQV 90

[Close]
BLAST of Moc09g10300 vs. NCBI nr
Match: KAA8549541.1 (hypothetical protein F0562_001441 [Nyssa sinensis])

HSP 1 Score: 131.3 bits (329), Expect = 8.8e-27
Identity = 62/90 (68.89%), Postives = 74/90 (82.22%), Query Frame = 0 

Query: 26  MNGGSNVCVDKLTGDNGWLLEATMEVFLPGQYLWDLISGEDSVISDDTPQNAEVQRKWKI 85
           MNGGS+V VDKL G+N    +  ME +L GQ LWDLISG+D VI +DTP+NAE++RKWKI
Sbjct: 1   MNGGSSVSVDKLVGNNYSYWKLCMEAYLQGQDLWDLISGDDVVIPEDTPKNAELRRKWKI 60

Query: 86  KCGKALFALRTSIFKEYIEHVRDIDSPKEV 116
           KCGKALFALRTSI +EYI+HVRD  SPK+V
Sbjct: 61  KCGKALFALRTSISQEYIQHVRDGKSPKQV 90

[Close]
BLAST of Moc09g10300 vs. NCBI nr
Match: KAA8538840.1 (hypothetical protein F0562_025532 [Nyssa sinensis])

HSP 1 Score: 128.6 bits (322), Expect = 5.7e-26
Identity = 60/90 (66.67%), Postives = 72/90 (80.00%), Query Frame = 0 

Query: 26  MNGGSNVCVDKLTGDNGWLLEATMEVFLPGQYLWDLISGEDSVISDDTPQNAEVQRKWKI 85
           MNGGS+V  DKL  +N    +  ME +L GQ LWDLIS +D+VI +DTPQNAE++RKWKI
Sbjct: 1   MNGGSSVSADKLVSNNYSYWKLCMEAYLQGQDLWDLISCDDAVIPEDTPQNAELRRKWKI 60

Query: 86  KCGKALFALRTSIFKEYIEHVRDIDSPKEV 116
           KCGKALFALRTSI +EYIEH+RD  SPK+V
Sbjct: 61  KCGKALFALRTSISQEYIEHIRDAKSPKQV 90

[Close]
BLAST of Moc09g10300 vs. NCBI nr
Match: KAA8549858.1 (hypothetical protein F0562_001542 [Nyssa sinensis])

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-25
Identity = 61/90 (67.78%), Postives = 72/90 (80.00%), Query Frame = 0 

Query: 26  MNGGSNVCVDKLTGDNGWLLEATMEVFLPGQYLWDLISGEDSVISDDTPQNAEVQRKWKI 85
           MNGGS+V VDKL G+N    +  ME +L GQ LWDLISG+D VI +DTPQN E++RKWKI
Sbjct: 1   MNGGSSVSVDKLVGNNYSYRKLCMEAYLQGQNLWDLISGDDVVILEDTPQNVELRRKWKI 60

Query: 86  KCGKALFALRTSIFKEYIEHVRDIDSPKEV 116
           K GKALFALRTSI +EYI+HVRD  SPK+V
Sbjct: 61  KYGKALFALRTSISQEYIQHVRDGKSPKQV 90

[Close]
BLAST of Moc09g10300 vs. NCBI nr
Match: RWR74934.1 (Integrase, catalytic core [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 125.9 bits (315), Expect = 3.7e-25
Identity = 59/95 (62.11%), Postives = 74/95 (77.89%), Query Frame = 0 

Query: 26  MNGGSNVCVDKLTGDNGWLLEATMEVFLPGQYLWDLISGEDSVISDDTPQNAEVQRKWKI 85
           MNGGSNV +DKL G+N    +  ME +L GQ LWDLISG+++VI +DT QNA++ RKWKI
Sbjct: 1   MNGGSNVSIDKLVGNNYNYWKLCMEAYLQGQDLWDLISGDNAVIPEDTSQNADLWRKWKI 60

Query: 86  KCGKALFALRTSIFKEYIEHVRDIDSPKEVPNLKE 121
           KCGKALFALRTSI ++YI  VRD+ SPK+V  + E
Sbjct: 61  KCGKALFALRTSISQDYIARVRDVSSPKQVWEILE 95

[Close]
BLAST of Moc09g10300 vs. ExPASy TrEMBL
Match: A0A5J5BCB3 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_024753 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.9e-27
Identity = 62/90 (68.89%), Postives = 74/90 (82.22%), Query Frame = 0 

Query: 26  MNGGSNVCVDKLTGDNGWLLEATMEVFLPGQYLWDLISGEDSVISDDTPQNAEVQRKWKI 85
           MNGGS+V +DKL G+N    +  ME +L GQ LWDLISG+D VI +DTPQNAE++RKWKI
Sbjct: 1   MNGGSSVSIDKLVGNNYSYWKLCMEAYLQGQDLWDLISGDDVVIPEDTPQNAELRRKWKI 60

Query: 86  KCGKALFALRTSIFKEYIEHVRDIDSPKEV 116
           KCGKALFALRTSI +EYI+HVRD  SPK+V
Sbjct: 61  KCGKALFALRTSISQEYIQHVRDGKSPKQV 90

[Close]
BLAST of Moc09g10300 vs. ExPASy TrEMBL
Match: A0A5J5C7C2 (DUF4219 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_001441 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 4.2e-27
Identity = 62/90 (68.89%), Postives = 74/90 (82.22%), Query Frame = 0 

Query: 26  MNGGSNVCVDKLTGDNGWLLEATMEVFLPGQYLWDLISGEDSVISDDTPQNAEVQRKWKI 85
           MNGGS+V VDKL G+N    +  ME +L GQ LWDLISG+D VI +DTP+NAE++RKWKI
Sbjct: 1   MNGGSSVSVDKLVGNNYSYWKLCMEAYLQGQDLWDLISGDDVVIPEDTPKNAELRRKWKI 60

Query: 86  KCGKALFALRTSIFKEYIEHVRDIDSPKEV 116
           KCGKALFALRTSI +EYI+HVRD  SPK+V
Sbjct: 61  KCGKALFALRTSISQEYIQHVRDGKSPKQV 90

[Close]
BLAST of Moc09g10300 vs. ExPASy TrEMBL
Match: A0A5J5B8Q2 (DUF4219 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_025532 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.7e-26
Identity = 60/90 (66.67%), Postives = 72/90 (80.00%), Query Frame = 0 

Query: 26  MNGGSNVCVDKLTGDNGWLLEATMEVFLPGQYLWDLISGEDSVISDDTPQNAEVQRKWKI 85
           MNGGS+V  DKL  +N    +  ME +L GQ LWDLIS +D+VI +DTPQNAE++RKWKI
Sbjct: 1   MNGGSSVSADKLVSNNYSYWKLCMEAYLQGQDLWDLISCDDAVIPEDTPQNAELRRKWKI 60

Query: 86  KCGKALFALRTSIFKEYIEHVRDIDSPKEV 116
           KCGKALFALRTSI +EYIEH+RD  SPK+V
Sbjct: 61  KCGKALFALRTSISQEYIEHIRDAKSPKQV 90

[Close]
BLAST of Moc09g10300 vs. ExPASy TrEMBL
Match: A0A5J5C3K7 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_001542 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 8.0e-26
Identity = 61/90 (67.78%), Postives = 72/90 (80.00%), Query Frame = 0 

Query: 26  MNGGSNVCVDKLTGDNGWLLEATMEVFLPGQYLWDLISGEDSVISDDTPQNAEVQRKWKI 85
           MNGGS+V VDKL G+N    +  ME +L GQ LWDLISG+D VI +DTPQN E++RKWKI
Sbjct: 1   MNGGSSVSVDKLVGNNYSYRKLCMEAYLQGQNLWDLISGDDVVILEDTPQNVELRRKWKI 60

Query: 86  KCGKALFALRTSIFKEYIEHVRDIDSPKEV 116
           K GKALFALRTSI +EYI+HVRD  SPK+V
Sbjct: 61  KYGKALFALRTSISQEYIQHVRDGKSPKQV 90

[Close]
BLAST of Moc09g10300 vs. ExPASy TrEMBL
Match: A0A443N8T5 (Integrase, catalytic core OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00329300 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.8e-25
Identity = 59/95 (62.11%), Postives = 74/95 (77.89%), Query Frame = 0 

Query: 26  MNGGSNVCVDKLTGDNGWLLEATMEVFLPGQYLWDLISGEDSVISDDTPQNAEVQRKWKI 85
           MNGGSNV +DKL G+N    +  ME +L GQ LWDLISG+++VI +DT QNA++ RKWKI
Sbjct: 1   MNGGSNVSIDKLVGNNYNYWKLCMEAYLQGQDLWDLISGDNAVIPEDTSQNADLWRKWKI 60

Query: 86  KCGKALFALRTSIFKEYIEHVRDIDSPKEVPNLKE 121
           KCGKALFALRTSI ++YI  VRD+ SPK+V  + E
Sbjct: 61  KCGKALFALRTSISQDYIARVRDVSSPKQVWEILE 95

[Close]
BLAST of Moc09g10300 vs. TAIR 10
Match: AT5G10290.1 (leucine-rich repeat transmembrane protein kinase family protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.0e-04
Identity = 26/51 (50.98%), Postives = 32/51 (62.75%), Query Frame = 0 

Query: 145 SAHSCAKDDFEAFVDDFGLMKSIGVSMTYV-TQVSEIMGHIELKYLFTGES 195
           +A+    +DFEA V DFGL K + V  T V TQV   MGHI  +YL TG+S
Sbjct: 420 AANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKS 470

[Close]
BLAST of Moc09g10300 vs. TAIR 10
Match: AT5G63710.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 42.4 bits (98), Expect = 5.0e-04
Identity = 23/51 (45.10%), Postives = 33/51 (64.71%), Query Frame = 0 

Query: 145 SAHSCAKDDFEAFVDDFGLMKSIGVSMTYV-TQVSEIMGHIELKYLFTGES 195
           +A+    ++FE  + DFGL K +  S+T+V TQV   MGHI  +YL TG+S
Sbjct: 419 AANILLDNNFEPVLGDFGLAKLVDTSLTHVTTQVRGTMGHIAPEYLCTGKS 469

The following BLAST results are available for this feature:
BLAST of Moc09g10300 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA8540328.13.9e-2768.89hypothetical protein F0562_024753 [Nyssa sinensis][more]
KAA8549541.18.8e-2768.89hypothetical protein F0562_001441 [Nyssa sinensis][more]
KAA8538840.15.7e-2666.67hypothetical protein F0562_025532 [Nyssa sinensis][more]
KAA8549858.11.7e-2567.78hypothetical protein F0562_001542 [Nyssa sinensis][more]
RWR74934.13.7e-2562.11Integrase, catalytic core [Cinnamomum micranthum f. kanehirae][more]
BLAST of Moc09g10300 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc09g10300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5J5BCB31.9e-2768.89Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_024753 PE=4 SV=1[more]
A0A5J5C7C24.2e-2768.89DUF4219 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_001441 PE... [more]
A0A5J5B8Q22.7e-2666.67DUF4219 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_025532 PE... [more]
A0A5J5C3K78.0e-2667.78Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_001542 PE=4 SV=1[more]
A0A443N8T51.8e-2562.11Integrase, catalytic core OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKA... [more]
BLAST of Moc09g10300 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G10290.11.0e-0450.98leucine-rich repeat transmembrane protein kinase family protein [more]
AT5G63710.15.0e-0445.10Leucine-rich repeat protein kinase family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g10300.1Moc09g10300.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006508 proteolysis
cellular_component GO:0005576 extracellular region
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004185 serine-type carboxypeptidase activity
molecular_function GO:0008270 zinc ion binding