Moc09g09330 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g09330
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptiontranscription factor MYB14-like
Locationchr9: 7756495 .. 7757755 (-)
RNA-Seq ExpressionMoc09g09330
SyntenyMoc09g09330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAACACCGATAATAATGTCAGTGACAATGATACCAAGCTCGTAGAACTTGCTTTTGCAGAAGATTTTTTAAAGAATTTATTGTCGGAAGAAGAATTTTTCGATATCGATTCGAATCTAGAGAAGGATTATAATTGTGGGATGGTGATAAACGATGAGGTTGAAATTCCTTTGAGTGGAGAAGAATTTAACAGCTGTGGTTCTTCAGAGACACTTGATATCATGGATTTTTGGAGAAGTGTTTTTATGAGAGATGGAGAATTACCAGAAGTACTGGAAGAAAGTAATATAATATAAATAAATTTGGGATGTTATTTAATTTGTTAGGAAAAAAAAGGAAAACTATGAATTTTCAGAATTATCTGAATTTCTTGTTTTAAAATTGTTTTGCCACTCTCTTGTAAAAATTATGTTTGAACTGTGAAGAAACTACCATTGAAACATGTAATTGCGTTTGGTACGTAATTTGAAAATAGAAATCTAAAAACAAAGAATTGATTTGTATTCCATATTTTTTAATATATGTTCGTAGTATATTTGAGAATTGGATCTCTATTTTAAAAATGATTCAATAGGTGTTTAGTGATATATTTGTTTAATAGTTTTAATATTTAATTCAATTTAAAATATTATTAATTTATTTATTAACATATTTATTAAAAATTTATATAATTATTATTGTATAATACAATATTACCTATTACGTTTTACATGTTTTAATTTTAACCAAATGAAATGAATTTATAATATATATATATATATATATATTTATTTATTTATTTATTTATTTATCTTTTTTAATATAATTATGCATTTGAAACATTAAAACATATAATCTTGTTTTTAGAATTTCTATTTAAATCACAAAAATGTAAAATCAGTTTTAAAAATTGAATATATTAAATAGATATTAACTGATCCATTTGATTTAGTAAATTTGAAAAATTCGGATTGCATCCCACTCTAATTTACTTTATTGTTTGTCATTTATTTTGGATTTATCTCCGATTAGAAGGTCATGAGTGAGGTCTCACCTGATTGTAGAATAGCTGACAAGCCACGTCAAGGAATGACCTACATAAGATAGACAAATACTTTGATGCTGAAGTCAGTATAAGTTTGGACTTAATATGGAGTTTGAGATAGAATTTGATACCTGTCGCAGAAGTGATGTCCTCTATTTATAGGTTGGTTATCCGACAAGCCTTCTGAGAGGCACTTATGCGTATCTGAAAGTCTGTCATTTGTTGCACTTTAA

mRNA sequence

ATGAACAACACCGATAATAATGTCAGTGACAATGATACCAAGCTCGTAGAACTTGCTTTTGCAGAAGATTTTTTAAAGAATTTATTGTCGGAAGAAGAATTTTTCGATATCGATTCGAATCTAGAGAAGGATTATAATTGTGGGATGGTGATAAACGATGAGGTTGAAATTCCTTTGAGTGGAGAAGAATTTAACAGCTGTGGTTCTTCAGAGACACTTGATATCATGGATTTTTGGAGAAGTGTTTTTATGAGAGATGGAGAATTACCAGAAGTACTGGAAGAAAGTTGGTTATCCGACAAGCCTTCTGAGAGGCACTTATGCGTATCTGAAAGTCTGTCATTTGTTGCACTTTAA

Coding sequence (CDS)

ATGAACAACACCGATAATAATGTCAGTGACAATGATACCAAGCTCGTAGAACTTGCTTTTGCAGAAGATTTTTTAAAGAATTTATTGTCGGAAGAAGAATTTTTCGATATCGATTCGAATCTAGAGAAGGATTATAATTGTGGGATGGTGATAAACGATGAGGTTGAAATTCCTTTGAGTGGAGAAGAATTTAACAGCTGTGGTTCTTCAGAGACACTTGATATCATGGATTTTTGGAGAAGTGTTTTTATGAGAGATGGAGAATTACCAGAAGTACTGGAAGAAAGTTGGTTATCCGACAAGCCTTCTGAGAGGCACTTATGCGTATCTGAAAGTCTGTCATTTGTTGCACTTTAA

Protein sequence

MNNTDNNVSDNDTKLVELAFAEDFLKNLLSEEEFFDIDSNLEKDYNCGMVINDEVEIPLSGEEFNSCGSSETLDIMDFWRSVFMRDGELPEVLEESWLSDKPSERHLCVSESLSFVAL
Homology
BLAST of Moc09g09330 vs. NCBI nr
Match: XP_022143611.1 (transcription factor MYB14-like [Momordica charantia])

HSP 1 Score: 194.5 bits (493), Expect = 5.1e-46
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0

Query: 1   MNNTDNNVSDNDTKLVELAFAEDFLKNLLSEEEFFDIDSNLEKDYNCGMVINDEVEIPLS 60
           MNNTDNNVSDNDTKLVELAFAEDFLKNLLSEEEFFDIDSNLEKDYNCGMVINDEVEIPLS
Sbjct: 157 MNNTDNNVSDNDTKLVELAFAEDFLKNLLSEEEFFDIDSNLEKDYNCGMVINDEVEIPLS 216

Query: 61  GEEFNSCGSSETLDIMDFWRSVFMRDGELPEVLEES 97
           GEEFNSCGSSETLDIMDFWRSVFMRDGELPEVLEES
Sbjct: 217 GEEFNSCGSSETLDIMDFWRSVFMRDGELPEVLEES 252

BLAST of Moc09g09330 vs. NCBI nr
Match: XP_008451250.1 (PREDICTED: myb-related protein Myb4-like [Cucumis melo])

HSP 1 Score: 109.0 bits (271), Expect = 2.8e-20
Identity = 60/95 (63.16%), Postives = 72/95 (75.79%), Query Frame = 0

Query: 4   TDNNVSDNDTKLVELAFAEDFLKNLLSEEEFFDID-SNLEKDYNCGMVIN-----DEVEI 63
           T NN  D DT+LVELA AEDFL +LLS+EEFF+ D +NL KD  C MV +      EVEI
Sbjct: 160 TKNNNDDKDTELVELALAEDFLNSLLSDEEFFENDWNNLGKD--CAMVKDVDESPKEVEI 219

Query: 64  PLSGEEFNSCGSSETLDIMDFWRSVFMRDGELPEV 93
           PLSGEE ++C SS+T+DIMDFWR+VFM DGEL E+
Sbjct: 220 PLSGEEMSNCSSSDTVDIMDFWRNVFMNDGELQEI 252

BLAST of Moc09g09330 vs. NCBI nr
Match: XP_038896381.1 (transcription factor MYB14-like [Benincasa hispida])

HSP 1 Score: 104.8 bits (260), Expect = 5.3e-19
Identity = 63/97 (64.95%), Postives = 73/97 (75.26%), Query Frame = 0

Query: 2   NNTDNNVSDNDTKLVELAFAEDFLKNLLSEEEFFDIDSNLEKDYNCGMV--IND---EVE 61
           NN DN   D + +LVELAF +DFLKNLLSEEEFF+ + NLEKD  C M+  IN    +VE
Sbjct: 160 NNDDN---DKNVRLVELAFIDDFLKNLLSEEEFFENEWNLEKD--CIMIKDINQSPKKVE 219

Query: 62  IPLSGEEFNSCGSSE-TLDIMDFWRSVFMRDGELPEV 93
           IPL GEE +SC SSE T DIMDFWR+VFMRDGEL E+
Sbjct: 220 IPLCGEEISSCSSSENTDDIMDFWRNVFMRDGELQEI 251

BLAST of Moc09g09330 vs. NCBI nr
Match: XP_004148973.1 (transcription factor MYB14 [Cucumis sativus] >KGN44736.1 hypothetical protein Csa_016658 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 3.8e-17
Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 0

Query: 6   NNVSDNDTKLVELAFAEDFLKNLLSEEEFFDID-SNLEKDYNCGMVIN------DEVEIP 65
           NN  D D +L ELAFAEDFLK+LL EEEF + D +NL KD  C M+ +       EVEIP
Sbjct: 160 NNNDDKDAELAELAFAEDFLKSLLLEEEFSENDWNNLGKD--CVMIKDVVDESPKEVEIP 219

Query: 66  LSG-EEFNSCGSSETLDIMDFWRSVFMRDGELPEV 93
           LSG EE ++C SS+T+DIMDFWR+VFM+DGEL E+
Sbjct: 220 LSGEEEMSNCSSSDTVDIMDFWRNVFMKDGELQEI 252

BLAST of Moc09g09330 vs. NCBI nr
Match: XP_023515116.1 (transcription factor MYB14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-13
Identity = 52/96 (54.17%), Postives = 60/96 (62.50%), Query Frame = 0

Query: 4   TDNNVSDNDTKLVELAFAEDFLKNLLSEEEFFDIDSNLEKDYNCGMVIND-----EVEIP 63
           T NN  DNDT+L ELAFA+DFL+NL SEEE F          NC M+ ND     EVEI 
Sbjct: 160 TKNNDDDNDTRLEELAFAKDFLENLFSEEEIF--------PNNCNMIKNDDQSPKEVEI- 219

Query: 64  LSGEEFNSCGSSETLDIMDFWRSVFMRDGELPEVLE 95
                     SS+T+DIMDFWR VFM+DGELPE+ E
Sbjct: 220 ----------SSDTVDIMDFWRGVFMKDGELPELQE 236

BLAST of Moc09g09330 vs. ExPASy TrEMBL
Match: A0A6J1CQT0 (transcription factor MYB14-like OS=Momordica charantia OX=3673 GN=LOC111013467 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.5e-46
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0

Query: 1   MNNTDNNVSDNDTKLVELAFAEDFLKNLLSEEEFFDIDSNLEKDYNCGMVINDEVEIPLS 60
           MNNTDNNVSDNDTKLVELAFAEDFLKNLLSEEEFFDIDSNLEKDYNCGMVINDEVEIPLS
Sbjct: 157 MNNTDNNVSDNDTKLVELAFAEDFLKNLLSEEEFFDIDSNLEKDYNCGMVINDEVEIPLS 216

Query: 61  GEEFNSCGSSETLDIMDFWRSVFMRDGELPEVLEES 97
           GEEFNSCGSSETLDIMDFWRSVFMRDGELPEVLEES
Sbjct: 217 GEEFNSCGSSETLDIMDFWRSVFMRDGELPEVLEES 252

BLAST of Moc09g09330 vs. ExPASy TrEMBL
Match: A0A1S3BR10 (myb-related protein Myb4-like OS=Cucumis melo OX=3656 GN=LOC103492597 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.4e-20
Identity = 60/95 (63.16%), Postives = 72/95 (75.79%), Query Frame = 0

Query: 4   TDNNVSDNDTKLVELAFAEDFLKNLLSEEEFFDID-SNLEKDYNCGMVIN-----DEVEI 63
           T NN  D DT+LVELA AEDFL +LLS+EEFF+ D +NL KD  C MV +      EVEI
Sbjct: 160 TKNNNDDKDTELVELALAEDFLNSLLSDEEFFENDWNNLGKD--CAMVKDVDESPKEVEI 219

Query: 64  PLSGEEFNSCGSSETLDIMDFWRSVFMRDGELPEV 93
           PLSGEE ++C SS+T+DIMDFWR+VFM DGEL E+
Sbjct: 220 PLSGEEMSNCSSSDTVDIMDFWRNVFMNDGELQEI 252

BLAST of Moc09g09330 vs. ExPASy TrEMBL
Match: A0A0A0KAA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375780 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.9e-17
Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 0

Query: 6   NNVSDNDTKLVELAFAEDFLKNLLSEEEFFDID-SNLEKDYNCGMVIN------DEVEIP 65
           NN  D D +L ELAFAEDFLK+LL EEEF + D +NL KD  C M+ +       EVEIP
Sbjct: 160 NNNDDKDAELAELAFAEDFLKSLLLEEEFSENDWNNLGKD--CVMIKDVVDESPKEVEIP 219

Query: 66  LSG-EEFNSCGSSETLDIMDFWRSVFMRDGELPEV 93
           LSG EE ++C SS+T+DIMDFWR+VFM+DGEL E+
Sbjct: 220 LSGEEEMSNCSSSDTVDIMDFWRNVFMKDGELQEI 252

BLAST of Moc09g09330 vs. ExPASy TrEMBL
Match: A0A6J1H6L7 (transcription factor MYB4-like OS=Cucurbita moschata OX=3662 GN=LOC111460679 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.8e-12
Identity = 49/91 (53.85%), Postives = 58/91 (63.74%), Query Frame = 0

Query: 4   TDNNVSDNDTKLVELAFAEDFLKNLLSEEEFFDIDSNLEKDYNCGMVINDEVEIPLSGEE 63
           T NN    DTKL ELAFA+DFL+NL SEEE F          NC M+ ND+ + P   E 
Sbjct: 157 TKNNDDGKDTKLEELAFAKDFLENLFSEEEIF--------PNNCDMIKNDD-QSPKDVEI 216

Query: 64  FNSCGSSETLDIMDFWRSVFMRDGELPEVLE 95
                SS+T+DIMDFWR VFM+DGELPE+ E
Sbjct: 217 -----SSDTVDIMDFWRGVFMKDGELPELQE 233

BLAST of Moc09g09330 vs. ExPASy TrEMBL
Match: A0A6J1KZ98 (transcription factor MYB13-like OS=Cucurbita maxima OX=3661 GN=LOC111497704 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 8.9e-12
Identity = 48/96 (50.00%), Postives = 57/96 (59.38%), Query Frame = 0

Query: 4   TDNNVSDNDTKLVELAFAEDFLKNLLSEEEFFDIDSNLEKDYNCGMVIND-----EVEIP 63
           T NN  DNDT+L ELAF +DFL+NL SEEE            NC M+ ND     EVEI 
Sbjct: 157 TKNNDDDNDTRLEELAFTKDFLENLFSEEEIC--------PNNCDMIKNDDKSPKEVEI- 216

Query: 64  LSGEEFNSCGSSETLDIMDFWRSVFMRDGELPEVLE 95
                     SS+T+DIMDFW+ +FM DGELPE+ E
Sbjct: 217 ----------SSDTVDIMDFWKGIFMNDGELPELQE 233

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022143611.15.1e-46100.00transcription factor MYB14-like [Momordica charantia][more]
XP_008451250.12.8e-2063.16PREDICTED: myb-related protein Myb4-like [Cucumis melo][more]
XP_038896381.15.3e-1964.95transcription factor MYB14-like [Benincasa hispida][more]
XP_004148973.13.8e-1760.00transcription factor MYB14 [Cucumis sativus] >KGN44736.1 hypothetical protein Cs... [more]
XP_023515116.11.2e-1354.17transcription factor MYB14-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CQT02.5e-46100.00transcription factor MYB14-like OS=Momordica charantia OX=3673 GN=LOC111013467 P... [more]
A0A1S3BR101.4e-2063.16myb-related protein Myb4-like OS=Cucumis melo OX=3656 GN=LOC103492597 PE=4 SV=1[more]
A0A0A0KAA11.9e-1760.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375780 PE=4 SV=1[more]
A0A6J1H6L71.8e-1253.85transcription factor MYB4-like OS=Cucurbita moschata OX=3662 GN=LOC111460679 PE=... [more]
A0A6J1KZ988.9e-1250.00transcription factor MYB13-like OS=Cucurbita maxima OX=3661 GN=LOC111497704 PE=4... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g09330.1Moc09g09330.1mRNA