Moc09g08890 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g08890
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Auxin-responsive protein
Location	chr9: 7295961 .. 7296857 (+)
RNA-Seq Expression	Moc09g08890
Synteny	Moc09g08890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGATTGGCAGTTTCCGACCACCGAGATCTCAACCTCAGAGCCACCGAGCTCCGCCTCGGCCTCCCCGGCTCCGACGACGAGCCCGACCACCGCCACGGGTCGCAGTCCAACAAGAGACCCTTTTCGGAGATTGATAAAGAAAGTCACAGCAGCATTTCCGATGCCAGAAATGACTCCCACCCTCCTCCCTCCAAGTAAGTAAAGGAGATATATTGGTTAGATCTAAGATAAATAGGCAAGTGAGACGATGGTCTAAGATATTATTTAAGACCTAAAATTTCCTTGAACTAATATTGTTAAGCATTGCAGGGCACAAGTTGTAGGATGGCCACCGATTCGATCATATCGAAAAAATATTTTGGCCGGAAAGAAAACCGAGGGAGAAAGTTGCTCCAGAGCGTATGTGAAAGTTAGCATGGATGGAGCTCCTTATCTAAGGAAGATGGATCTTACCATTTACAAAAGCTACGTAGAGCTCGTGAAGGCCTTGGAAAACATGTTCAAATTCAACCTCGGTAAGAGAAAATTCAGTCCAGTTAAATTTATCATAGCTCATCAACTTAGATTCAAGCTTTTATAGCCAGTGGAATAGTAATTTAACAAGTACTCGATTAAATTCATCAGGTGATTACTCAGAGAAGGAAGGTTTCAATGGATCGGATTACGCTCCTACTTACGAAGACAAAGATGGCGATTGGATGCTCGTGGGCGATGTTCCATGGGAGTAAGTTCTTTTTTCGCTCTCTTTTCTTCCTTCTCGCTCTTAAGATTAATCGAAAGAACGTTTTTCTGATCCAAGAATTTCAAAATATATGCAGAATGTTCATCTCCTCTTGCAAGAGGCTGAGGATCATGAAGGGATCAGAAGCAAGAGGATTGGGTTGTTCATAA

mRNA sequence

ATGGCGAGATTGGCAGTTTCCGACCACCGAGATCTCAACCTCAGAGCCACCGAGCTCCGCCTCGGCCTCCCCGGCTCCGACGACGAGCCCGACCACCGCCACGGGTCGCAGTCCAACAAGAGACCCTTTTCGGAGATTGATAAAGAAAGTCACAGCAGCATTTCCGATGCCAGAAATGACTCCCACCCTCCTCCCTCCAAGGCACAAGTTGTAGGATGGCCACCGATTCGATCATATCGAAAAAATATTTTGGCCGGAAAGAAAACCGAGGGAGAAAGTTGCTCCAGAGCGTATGTGAAAGTTAGCATGGATGGAGCTCCTTATCTAAGGAAGATGGATCTTACCATTTACAAAAGCTACGTAGAGCTCGTGAAGGCCTTGGAAAACATGTTCAAATTCAACCTCGGTGATTACTCAGAGAAGGAAGGTTTCAATGGATCGGATTACGCTCCTACTTACGAAGACAAAGATGGCGATTGGATGCTCGTGGGCGATGTTCCATGGGAAATGTTCATCTCCTCTTGCAAGAGGCTGAGGATCATGAAGGGATCAGAAGCAAGAGGATTGGGTTGTTCATAA

Coding sequence (CDS)

ATGGCGAGATTGGCAGTTTCCGACCACCGAGATCTCAACCTCAGAGCCACCGAGCTCCGCCTCGGCCTCCCCGGCTCCGACGACGAGCCCGACCACCGCCACGGGTCGCAGTCCAACAAGAGACCCTTTTCGGAGATTGATAAAGAAAGTCACAGCAGCATTTCCGATGCCAGAAATGACTCCCACCCTCCTCCCTCCAAGGCACAAGTTGTAGGATGGCCACCGATTCGATCATATCGAAAAAATATTTTGGCCGGAAAGAAAACCGAGGGAGAAAGTTGCTCCAGAGCGTATGTGAAAGTTAGCATGGATGGAGCTCCTTATCTAAGGAAGATGGATCTTACCATTTACAAAAGCTACGTAGAGCTCGTGAAGGCCTTGGAAAACATGTTCAAATTCAACCTCGGTGATTACTCAGAGAAGGAAGGTTTCAATGGATCGGATTACGCTCCTACTTACGAAGACAAAGATGGCGATTGGATGCTCGTGGGCGATGTTCCATGGGAAATGTTCATCTCCTCTTGCAAGAGGCTGAGGATCATGAAGGGATCAGAAGCAAGAGGATTGGGTTGTTCATAA

Protein sequence

MARLAVSDHRDLNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARNDSHPPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLRIMKGSEARGLGCS

Homology

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BLAST of Moc09g08890 vs. NCBI nr
Match: XP_022155822.1 (auxin-induced protein 22D-like [Momordica charantia])

HSP 1 Score: 393.7 bits (1010), Expect = 9.4e-106
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MARLAVSDHRDLNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARND 60
           MARLAVSDHRDLNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARND
Sbjct: 1   MARLAVSDHRDLNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARND 60

Query: 61  SHPPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSY 120
           SHPPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSY
Sbjct: 61  SHPPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSY 120

Query: 121 VELVKALENMFKFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLRI 180
           VELVKALENMFKFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLRI
Sbjct: 121 VELVKALENMFKFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLRI 180

Query: 181 MKGSEARGLGCS 193
           MKGSEARGLGCS
Sbjct: 181 MKGSEARGLGCS 192

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BLAST of Moc09g08890 vs. NCBI nr
Match: XP_023004261.1 (auxin-induced protein 22D-like [Cucurbita maxima])

HSP 1 Score: 319.3 bits (817), Expect = 2.2e-83
Identity = 160/194 (82.47%), Postives = 170/194 (87.63%), Query Frame = 0


Query: 1   MARLAVSDHRDLNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARN- 60
           MA+LAVSD RDLNL+ATELRLGLPGS D+PD R GSQ NKRPFSEIDKE+ S +SDA N 
Sbjct: 1   MAKLAVSDDRDLNLQATELRLGLPGS-DQPDRRCGSQPNKRPFSEIDKENDSRVSDAENG 60

Query: 61  ---DSHPPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTI 120
               S PPPSK Q+VGWPPIRSYRKN LAGKK+E ESC+  YVKVSMDGAPYLRK+DLTI
Sbjct: 61  SDQSSQPPPSKGQIVGWPPIRSYRKNCLAGKKSEAESCNGGYVKVSMDGAPYLRKIDLTI 120

Query: 121 YKSYVELVKALENMFKFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCK 180
           YKSYVELVKALENMF FNLG YSEKEGFNGSDY PTYEDKD DWMLVGDVPWEMFI SCK
Sbjct: 121 YKSYVELVKALENMFNFNLGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMFICSCK 180

Query: 181 RLRIMKGSEARGLG 191
           RLRIMKGSEA+GLG
Sbjct: 181 RLRIMKGSEAKGLG 193

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BLAST of Moc09g08890 vs. NCBI nr
Match: XP_022960238.1 (auxin-induced protein 22D-like [Cucurbita moschata])

HSP 1 Score: 315.8 bits (808), Expect = 2.5e-82
Identity = 156/191 (81.68%), Postives = 167/191 (87.43%), Query Frame = 0


Query: 4   LAVSDHRDLNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARN---- 63
           +AVSD RDLNL+ATELRLGLPGS D+PDHR GSQ NKRPFSEIDKE+ S +SD  N    
Sbjct: 1   MAVSDDRDLNLQATELRLGLPGS-DQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDP 60

Query: 64  DSHPPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKS 123
            S PPPSKAQ+VGWPP+RSYRKN L GKK+E ESC+  YVKVSMDGAPYLRK+DLTIYKS
Sbjct: 61  SSQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKS 120

Query: 124 YVELVKALENMFKFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLR 183
           YVELVKALENMF FNLG YSEKEGFNGSDY PTYEDKD DWMLVGDVPWEMFI SCKRLR
Sbjct: 121 YVELVKALENMFNFNLGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMFICSCKRLR 180

Query: 184 IMKGSEARGLG 191
           IMKGSEA+GLG
Sbjct: 181 IMKGSEAKGLG 190

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BLAST of Moc09g08890 vs. NCBI nr
Match: XP_023513502.1 (auxin-induced protein 22D-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.7 bits (805), Expect = 5.5e-82
Identity = 156/191 (81.68%), Postives = 168/191 (87.96%), Query Frame = 0


Query: 4   LAVSDHRDLNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARN---- 63
           +AVSD RDLNL+ATELRLGLPGS D+PD R GSQ NKRPFSEIDKE+ S +SDA N    
Sbjct: 1   MAVSDDRDLNLQATELRLGLPGS-DQPDRRCGSQPNKRPFSEIDKENDSRVSDAENGSDQ 60

Query: 64  DSHPPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKS 123
            S PPPSKAQ+VGWPP+RSYRKN LAGKK+E ESC+  YVKVSMDGAPYLRK+DLTIYKS
Sbjct: 61  SSQPPPSKAQIVGWPPVRSYRKNCLAGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKS 120

Query: 124 YVELVKALENMFKFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLR 183
           YVELVKALENMF FNLG YSEKEGFNGSDY PTYEDKD DWMLVGDVPWEMFI SCKRLR
Sbjct: 121 YVELVKALENMFNFNLGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMFICSCKRLR 180

Query: 184 IMKGSEARGLG 191
           IMKGSEA+G+G
Sbjct: 181 IMKGSEAKGVG 190

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BLAST of Moc09g08890 vs. NCBI nr
Match: XP_008451269.1 (PREDICTED: auxin-induced protein 22D-like [Cucumis melo] >KAA0059697.1 auxin-induced protein 22D-like [Cucumis melo var. makuwa] >TYK26134.1 auxin-induced protein 22D-like [Cucumis melo var. makuwa])

HSP 1 Score: 314.3 bits (804), Expect = 7.2e-82
Identity = 165/197 (83.76%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MARLAV-SDHRDLNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARN 60
           MA+LA  SDH DLN +ATELRLGLPGS DEPD R  S+SNKRPFSEIDKES+SSIS+  N
Sbjct: 1   MAKLAASSDHPDLNFQATELRLGLPGS-DEPDRRTESKSNKRPFSEIDKESNSSISNNGN 60

Query: 61  ----DSHPPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLT 120
                S PPPSKAQVVGWPP+RSYRKN LAGKK+E ES S  YVKVSMDGAPYLRK+DLT
Sbjct: 61  CLDQTSQPPPSKAQVVGWPPVRSYRKNYLAGKKSETESSSGGYVKVSMDGAPYLRKIDLT 120

Query: 121 IYKSYVELVKALENMFKFNLGDYSEKEGF-NGSDYAPTYEDKDGDWMLVGDVPWEMFISS 180
           IYKSY ELVKALENMFKFNLG YSEKEGF NGSDYAPTYEDKDGDWMLVGDVPWEMFISS
Sbjct: 121 IYKSYTELVKALENMFKFNLGGYSEKEGFNNGSDYAPTYEDKDGDWMLVGDVPWEMFISS 180

Query: 181 CKRLRIMKGSEARGLGC 192
           CKRLRIMKGSEARGLGC
Sbjct: 181 CKRLRIMKGSEARGLGC 196

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BLAST of Moc09g08890 vs. ExPASy Swiss-Prot
Match: O24542 (Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.3e-65
Identity = 130/187 (69.52%), Postives = 152/187 (81.28%), Query Frame = 0


Query: 7   SDHRDLNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEI-DKESHSSISD-ARNDSHPP 66
           S  ++LNL+ATELRLGLPGS DEP+ R  ++SNKR   E  D+ES S+ SD  + D+  P
Sbjct: 7   SYEKELNLKATELRLGLPGS-DEPEKRATARSNKRSSPEASDEESISNGSDVTKEDNVVP 66

Query: 67  PSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELV 126
           P+KAQVVGWPPIRSYRKN +  KK E    +  YVKVSM GAPYLRK+DL +YKSY EL+
Sbjct: 67  PAKAQVVGWPPIRSYRKNNVQQKKEEESEGNGMYVKVSMAGAPYLRKIDLKVYKSYPELL 126

Query: 127 KALENMFKFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLRIMKGS 186
           KALENMFK   G+YSE+EG+NGS+YAPTYEDKDGDWMLVGDVPW MF+SSCKRLRIMKGS
Sbjct: 127 KALENMFKCIFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIMKGS 186

Query: 187 EARGLGC 192
           EA+GLGC
Sbjct: 187 EAKGLGC 192

[Close]

BLAST of Moc09g08890 vs. ExPASy Swiss-Prot
Match: O24543 (Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 4.7e-60
Identity = 119/196 (60.71%), Postives = 144/196 (73.47%), Query Frame = 0


Query: 11  DLNLRATELRLGLPGSDDEPDHRHGS-----QSNKRPFSEIDK----------ESHSSIS 70
           +LNLRATELRLGLPGSD+  + R  S      SNKR   E+++           S S+ +
Sbjct: 7   ELNLRATELRLGLPGSDEPQEKRPCSGSVVRSSNKRSSPELEESRCKSNINSDSSDSTTT 66

Query: 71  DARNDSHPPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLT 130
              N+    P+K QVVGWPPIRS+RKN L  KK E    +  Y+KVSM GAPYLRK+DL 
Sbjct: 67  SDHNEDSVQPAKVQVVGWPPIRSFRKNSLQQKKVEQGDGTGMYLKVSMAGAPYLRKIDLK 126

Query: 131 IYKSYVELVKALENMFKFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSC 190
           +YKSY EL+KAL+N+FK   G+YSE+EG+NGS+YAPTYEDKDGDWMLVGDVPW MF+SSC
Sbjct: 127 VYKSYPELLKALQNLFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSC 186

Query: 191 KRLRIMKGSEARGLGC 192
           KRLRI+KGSEA+GLGC
Sbjct: 187 KRLRIIKGSEAKGLGC 202

[Close]

BLAST of Moc09g08890 vs. ExPASy Swiss-Prot
Match: P33077 (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2)

HSP 1 Score: 228.4 bits (581), Expect = 6.8e-59
Identity = 114/180 (63.33%), Postives = 138/180 (76.67%), Query Frame = 0


Query: 12  LNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARNDSHPPPSKAQVV 71
           +NL+ATELRLGLPG+++        +SNKR   E  ++   S       S   P KAQ+V
Sbjct: 11  VNLKATELRLGLPGTEETVS---CGKSNKRVLPEATEKEIESTGKTETAS---PPKAQIV 70

Query: 72  GWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMF 131
           GWPP+RSYRKN +  KK+E E     YVKVSMDGAPYLRK+DLT+YK Y EL+K+LENMF
Sbjct: 71  GWPPVRSYRKNNVQTKKSESEGQGN-YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMF 130

Query: 132 KFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLRIMKGSEARGLGC 191
           KF++G+Y E+EG+ GSD+ PTYEDKDGDWMLVGDVPWEMF+SSCKRLRIMKGSE +GLGC
Sbjct: 131 KFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLGC 183

[Close]

BLAST of Moc09g08890 vs. ExPASy Swiss-Prot
Match: P32294 (Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 9.9e-58
Identity = 115/190 (60.53%), Postives = 143/190 (75.26%), Query Frame = 0


Query: 11  DLNLRATELRLGLPGSDDEPDHRHGS----QSNKRPFSEIDKESHSSISDARNDSH---- 70
           DLNL+ATELRLGLPG++++ D+   +    ++NKR   E  ++S S    + +  H    
Sbjct: 10  DLNLKATELRLGLPGTEEKEDNNLRTHAVLRNNKRQVRETSQDSVSISKASHHQQHVETV 69

Query: 71  -PPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYV 130
             PP KA++VGWPPIRSYRKN +     EGE     +VKVSMDGAPYLRK+DL +Y  Y 
Sbjct: 70  SAPPPKAKIVGWPPIRSYRKNSV----QEGEG-DGIFVKVSMDGAPYLRKVDLKVYGGYP 129

Query: 131 ELVKALENMFKFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLRIM 190
           EL+KALE MFK  +G+YSE+EG+ GS+YAPTYEDKDGDWMLVGDVPW+MF++SCKRLRIM
Sbjct: 130 ELLKALETMFKLAIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIM 189

Query: 191 KGSEARGLGC 192
           KGSEARGLGC
Sbjct: 190 KGSEARGLGC 194

[Close]

BLAST of Moc09g08890 vs. ExPASy Swiss-Prot
Match: Q38822 (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.3e-57
Identity = 114/186 (61.29%), Postives = 142/186 (76.34%), Query Frame = 0


Query: 12  LNLRATELRLGLPGSDDEPDHRHG----SQSNKRPFS-EIDKESHSSISDARNDSHPPPS 71
           +NL+ TELRLGLPG+D+  + +      + +NKR  S + +KE  SS   +R     PP 
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESS---SRKTETSPPR 64

Query: 72  KAQVVGWPPIRSYRKNILAGKKTEGESCSRA-YVKVSMDGAPYLRKMDLTIYKSYVELVK 131
           KAQ+VGWPP+RSYRKN +  KK E E   +  YVKVSMDGAPYLRK+DL+ YK Y EL+K
Sbjct: 65  KAQIVGWPPVRSYRKNNIQSKKNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLK 124

Query: 132 ALENMFKFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLRIMKGSE 191
           ALE MFKF++G+Y E++G+ GSD+ PTYEDKDGDWML+GDVPWEMFI +CKRLRIMKGSE
Sbjct: 125 ALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSE 184

[Close]

BLAST of Moc09g08890 vs. ExPASy TrEMBL
Match: A0A6J1DQE7 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111022852 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 4.5e-106
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MARLAVSDHRDLNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARND 60
           MARLAVSDHRDLNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARND
Sbjct: 1   MARLAVSDHRDLNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARND 60

Query: 61  SHPPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSY 120
           SHPPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSY
Sbjct: 61  SHPPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSY 120

Query: 121 VELVKALENMFKFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLRI 180
           VELVKALENMFKFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLRI
Sbjct: 121 VELVKALENMFKFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLRI 180

Query: 181 MKGSEARGLGCS 193
           MKGSEARGLGCS
Sbjct: 181 MKGSEARGLGCS 192

[Close]

BLAST of Moc09g08890 vs. ExPASy TrEMBL
Match: A0A6J1KRM5 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111497647 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 160/194 (82.47%), Postives = 170/194 (87.63%), Query Frame = 0


Query: 1   MARLAVSDHRDLNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARN- 60
           MA+LAVSD RDLNL+ATELRLGLPGS D+PD R GSQ NKRPFSEIDKE+ S +SDA N 
Sbjct: 1   MAKLAVSDDRDLNLQATELRLGLPGS-DQPDRRCGSQPNKRPFSEIDKENDSRVSDAENG 60

Query: 61  ---DSHPPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTI 120
               S PPPSK Q+VGWPPIRSYRKN LAGKK+E ESC+  YVKVSMDGAPYLRK+DLTI
Sbjct: 61  SDQSSQPPPSKGQIVGWPPIRSYRKNCLAGKKSEAESCNGGYVKVSMDGAPYLRKIDLTI 120

Query: 121 YKSYVELVKALENMFKFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCK 180
           YKSYVELVKALENMF FNLG YSEKEGFNGSDY PTYEDKD DWMLVGDVPWEMFI SCK
Sbjct: 121 YKSYVELVKALENMFNFNLGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMFICSCK 180

Query: 181 RLRIMKGSEARGLG 191
           RLRIMKGSEA+GLG
Sbjct: 181 RLRIMKGSEAKGLG 193

[Close]

BLAST of Moc09g08890 vs. ExPASy TrEMBL
Match: A0A6J1H897 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111461039 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.2e-82
Identity = 156/191 (81.68%), Postives = 167/191 (87.43%), Query Frame = 0


Query: 4   LAVSDHRDLNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARN---- 63
           +AVSD RDLNL+ATELRLGLPGS D+PDHR GSQ NKRPFSEIDKE+ S +SD  N    
Sbjct: 1   MAVSDDRDLNLQATELRLGLPGS-DQPDHRCGSQPNKRPFSEIDKENDSRVSDVENGSDP 60

Query: 64  DSHPPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKS 123
            S PPPSKAQ+VGWPP+RSYRKN L GKK+E ESC+  YVKVSMDGAPYLRK+DLTIYKS
Sbjct: 61  SSQPPPSKAQIVGWPPVRSYRKNCLVGKKSEAESCNGGYVKVSMDGAPYLRKIDLTIYKS 120

Query: 124 YVELVKALENMFKFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLR 183
           YVELVKALENMF FNLG YSEKEGFNGSDY PTYEDKD DWMLVGDVPWEMFI SCKRLR
Sbjct: 121 YVELVKALENMFNFNLGGYSEKEGFNGSDYVPTYEDKDSDWMLVGDVPWEMFICSCKRLR 180

Query: 184 IMKGSEARGLG 191
           IMKGSEA+GLG
Sbjct: 181 IMKGSEAKGLG 190

[Close]

BLAST of Moc09g08890 vs. ExPASy TrEMBL
Match: A0A5A7UYH3 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00540 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.5e-82
Identity = 165/197 (83.76%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MARLAV-SDHRDLNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARN 60
           MA+LA  SDH DLN +ATELRLGLPGS DEPD R  S+SNKRPFSEIDKES+SSIS+  N
Sbjct: 1   MAKLAASSDHPDLNFQATELRLGLPGS-DEPDRRTESKSNKRPFSEIDKESNSSISNNGN 60

Query: 61  ----DSHPPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLT 120
                S PPPSKAQVVGWPP+RSYRKN LAGKK+E ES S  YVKVSMDGAPYLRK+DLT
Sbjct: 61  CLDQTSQPPPSKAQVVGWPPVRSYRKNYLAGKKSETESSSGGYVKVSMDGAPYLRKIDLT 120

Query: 121 IYKSYVELVKALENMFKFNLGDYSEKEGF-NGSDYAPTYEDKDGDWMLVGDVPWEMFISS 180
           IYKSY ELVKALENMFKFNLG YSEKEGF NGSDYAPTYEDKDGDWMLVGDVPWEMFISS
Sbjct: 121 IYKSYTELVKALENMFKFNLGGYSEKEGFNNGSDYAPTYEDKDGDWMLVGDVPWEMFISS 180

Query: 181 CKRLRIMKGSEARGLGC 192
           CKRLRIMKGSEARGLGC
Sbjct: 181 CKRLRIMKGSEARGLGC 196

[Close]

BLAST of Moc09g08890 vs. ExPASy TrEMBL
Match: A0A1S3BS59 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103492618 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.5e-82
Identity = 165/197 (83.76%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MARLAV-SDHRDLNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARN 60
           MA+LA  SDH DLN +ATELRLGLPGS DEPD R  S+SNKRPFSEIDKES+SSIS+  N
Sbjct: 1   MAKLAASSDHPDLNFQATELRLGLPGS-DEPDRRTESKSNKRPFSEIDKESNSSISNNGN 60

Query: 61  ----DSHPPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLT 120
                S PPPSKAQVVGWPP+RSYRKN LAGKK+E ES S  YVKVSMDGAPYLRK+DLT
Sbjct: 61  CLDQTSQPPPSKAQVVGWPPVRSYRKNYLAGKKSETESSSGGYVKVSMDGAPYLRKIDLT 120

Query: 121 IYKSYVELVKALENMFKFNLGDYSEKEGF-NGSDYAPTYEDKDGDWMLVGDVPWEMFISS 180
           IYKSY ELVKALENMFKFNLG YSEKEGF NGSDYAPTYEDKDGDWMLVGDVPWEMFISS
Sbjct: 121 IYKSYTELVKALENMFKFNLGGYSEKEGFNNGSDYAPTYEDKDGDWMLVGDVPWEMFISS 180

Query: 181 CKRLRIMKGSEARGLGC 192
           CKRLRIMKGSEARGLGC
Sbjct: 181 CKRLRIMKGSEARGLGC 196

[Close]

BLAST of Moc09g08890 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 228.4 bits (581), Expect = 4.9e-60
Identity = 114/180 (63.33%), Postives = 138/180 (76.67%), Query Frame = 0


Query: 12  LNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARNDSHPPPSKAQVV 71
           +NL+ATELRLGLPG+++        +SNKR   E  ++   S       S   P KAQ+V
Sbjct: 11  VNLKATELRLGLPGTEETVS---CGKSNKRVLPEATEKEIESTGKTETAS---PPKAQIV 70

Query: 72  GWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMF 131
           GWPP+RSYRKN +  KK+E E     YVKVSMDGAPYLRK+DLT+YK Y EL+K+LENMF
Sbjct: 71  GWPPVRSYRKNNVQTKKSESEGQGN-YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMF 130

Query: 132 KFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLRIMKGSEARGLGC 191
           KF++G+Y E+EG+ GSD+ PTYEDKDGDWMLVGDVPWEMF+SSCKRLRIMKGSE +GLGC
Sbjct: 131 KFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLGC 183

[Close]

BLAST of Moc09g08890 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 224.2 bits (570), Expect = 9.2e-59
Identity = 114/186 (61.29%), Postives = 142/186 (76.34%), Query Frame = 0


Query: 12  LNLRATELRLGLPGSDDEPDHRHG----SQSNKRPFS-EIDKESHSSISDARNDSHPPPS 71
           +NL+ TELRLGLPG+D+  + +      + +NKR  S + +KE  SS   +R     PP 
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESS---SRKTETSPPR 64

Query: 72  KAQVVGWPPIRSYRKNILAGKKTEGESCSRA-YVKVSMDGAPYLRKMDLTIYKSYVELVK 131
           KAQ+VGWPP+RSYRKN +  KK E E   +  YVKVSMDGAPYLRK+DL+ YK Y EL+K
Sbjct: 65  KAQIVGWPPVRSYRKNNIQSKKNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLK 124

Query: 132 ALENMFKFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLRIMKGSE 191
           ALE MFKF++G+Y E++G+ GSD+ PTYEDKDGDWML+GDVPWEMFI +CKRLRIMKGSE
Sbjct: 125 ALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSE 184

[Close]

BLAST of Moc09g08890 vs. TAIR 10
Match: AT4G14560.1 (indole-3-acetic acid inducible )

HSP 1 Score: 203.0 bits (515), Expect = 2.2e-52
Identity = 101/175 (57.71%), Postives = 128/175 (73.14%), Query Frame = 0


Query: 12  LNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSEIDKESHSSISDARNDSHPPPSKAQVV 71
           LNL+ TELRLGLPG+ +E          +   S +   +    +D+  +S PPP+K Q+V
Sbjct: 7   LNLKDTELRLGLPGAQEE---------QQLELSCVRSNNKRKNNDSTEESAPPPAKTQIV 66

Query: 72  GWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMF 131
           GWPP+RS RKN          + + +YVKVSMDGAPYLRK+DL +YK+Y EL+KALENMF
Sbjct: 67  GWPPVRSNRKN--------NNNKNVSYVKVSMDGAPYLRKIDLKMYKNYPELLKALENMF 126

Query: 132 KFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLRIMKGSEA 187
           KF +G+YSE+EG+ GS + PTYEDKDGDWMLVGDVPW+MF SSC++LRIMKGSEA
Sbjct: 127 KFTVGEYSEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164

[Close]

BLAST of Moc09g08890 vs. TAIR 10
Match: AT3G23030.1 (indole-3-acetic acid inducible 2 )

HSP 1 Score: 193.7 bits (491), Expect = 1.3e-49
Identity = 106/193 (54.92%), Postives = 128/193 (66.32%), Query Frame = 0


Query: 4   LAVSDHRDLNLRATELRLGLPGS----DDEPDHRHGSQSNKRPFSEIDKESHSSISDARN 63
           +A     +LNL+ TEL LGLPG      +E +      +NKR F E   E  S+      
Sbjct: 1   MAYEKVNELNLKDTELCLGLPGRTEKIKEEQEVSCVKSNNKRLFEETRDEEEST------ 60

Query: 64  DSHPPPSKAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKS 123
               PP+K Q+VGWPP+RS RKN          + S +YVKVSMDGAPYLRK+DL  YK+
Sbjct: 61  ----PPTKTQIVGWPPVRSSRKN----------NNSVSYVKVSMDGAPYLRKIDLKTYKN 120

Query: 124 YVELVKALENMFKFNLGDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLR 183
           Y EL+KALENMFK  +G+Y E+EG+ GS + PTYEDKDGDWMLVGDVPW+MF SSCKRLR
Sbjct: 121 YPELLKALENMFKVMIGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLR 173

Query: 184 IMKGSEARGLGCS 193
           IMKGS+A  L  S
Sbjct: 181 IMKGSDAPALDSS 173

[Close]

BLAST of Moc09g08890 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 )

HSP 1 Score: 187.2 bits (474), Expect = 1.2e-47
Identity = 109/224 (48.66%), Postives = 135/224 (60.27%), Query Frame = 0


Query: 12  LNLRATELRLGLPGSDDEPDHRHGSQSNKRPFSE------------IDKESHSSISDARN 71
           +N  ATELRLGLPG  +      G  + KR FSE            +D  S   + + + 
Sbjct: 2   INFEATELRLGLPGG-NHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKE 61

Query: 72  DSHPPPSKAQVVGWPPIRSYRKNILAGKK------TEG--------------ESCSR-AY 131
               PP+KAQVVGWPP+RS+RKN+++G+K      TEG               +C+  AY
Sbjct: 62  KVVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAY 121

Query: 132 VKVSMDGAPYLRKMDLTIYKSYVELVKALENMF-KFNLGDYSEK------------EGFN 190
           VKVSMDGAPYLRK+DL +YK+Y +L  AL  MF  F +G+Y  +            +  N
Sbjct: 122 VKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLLN 181

The following BLAST results are available for this feature:

BLAST of Moc09g08890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155822.1	9.4e-106	100.00	auxin-induced protein 22D-like [Momordica charantia]	[more]
XP_023004261.1	2.2e-83	82.47	auxin-induced protein 22D-like [Cucurbita maxima]	[more]
XP_022960238.1	2.5e-82	81.68	auxin-induced protein 22D-like [Cucurbita moschata]	[more]
XP_023513502.1	5.5e-82	81.68	auxin-induced protein 22D-like [Cucurbita pepo subsp. pepo]	[more]
XP_008451269.1	7.2e-82	83.76	PREDICTED: auxin-induced protein 22D-like [Cucumis melo] >KAA0059697.1 auxin-ind...	[more]

BLAST of Moc09g08890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24542	1.3e-65	69.52	Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 S...	[more]
O24543	4.7e-60	60.71	Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 S...	[more]
P33077	6.8e-59	63.33	Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2	[more]
P32294	9.9e-58	60.53	Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 S...	[more]
Q38822	1.3e-57	61.29	Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1	[more]

BLAST of Moc09g08890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQE7	4.5e-106	100.00	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111022852 PE=3 SV=...	[more]
A0A6J1KRM5	1.1e-83	82.47	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111497647 PE=3 SV=1	[more]
A0A6J1H897	1.2e-82	81.68	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111461039 PE=3 SV=1	[more]
A0A5A7UYH3	3.5e-82	83.76	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BS59	3.5e-82	83.76	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103492618 PE=3 SV=1	[more]

BLAST of Moc09g08890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43700.1	4.9e-60	63.33	AUX/IAA transcriptional regulator family protein	[more]
AT1G04240.1	9.2e-59	61.29	AUX/IAA transcriptional regulator family protein	[more]
AT4G14560.1	2.2e-52	57.71	indole-3-acetic acid inducible	[more]
AT3G23030.1	1.3e-49	54.92	indole-3-acetic acid inducible 2	[more]
AT3G04730.1	1.2e-47	48.66	indoleacetic acid-induced protein 16	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 43..190 e-value: 3.4E-59 score: 200.6
None	No IPR available	GENE3D	3.10.20.90		coord: 91..192 e-value: 4.3E-44 score: 150.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..72
None	No IPR available	PANTHER	PTHR31734:SF167	AUXIN-RESPONSIVE PROTEIN	coord: 5..190
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 96..182
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 5..190
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 96..183 score: 24.482523

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g08890.1	Moc09g08890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding