Moc09g08260 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g08260
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr9: 6599714 .. 6602880 (-)
RNA-Seq Expression	Moc09g08260
Synteny	Moc09g08260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCGCCGCCGTCAATTTGGTCCAAAGAGGCGGCGGTATCGGTCGCCGTCATTGAGGCCTAAACAAACGGTTTTTTCCTTTGATCTGTCTGTGTCGTAGTACATTACAAGCTGGCGAGGAAATCGCTTTCCAAATCAATTTTTGTACTAAATTTTTGCACTCAAATTAATACAGATTTTTTTAATAAGACAAATTAATACACTTTTGTTTTCTTGTTTTTTTTTTTTGGTTTTAATGAGTTGAACAATAATAATTATTATTATTACTTTAGCTGAGAAAGAATGAGTTTAACAATTGGATTGTGAAATGGAATAGGAATCATCCACATTTGAGATGATAATAGACAGTGAGTTATGCTCGAATTAATAGTACAATTGATTTTGAATTATATATTTATTTTTAATTCTTATGTGCAGCTACAAGCGGCTTTACAAAGAATATGGGTGGAGCATTTAGGTTAAAAACTTATATAAAAAATTTAACTATATATAATTTAGATTTTAAAATATTCTTTCTAATTTGTTAGGTATAAATTTTCGCAATGAAAAGATTATATATAAAAAGTTAAAACATGTTGAGATATCTATATATTACTTAAATTTACTTAATTCATTGGCTTAAACTTTTGGTTTGAGTGGTGGCTAACATTTTTAACATTTTTACAAAATCTAACATTGTTAGATTTTGGTGATAATGGTATATTTGGTCATTTTTATCCCATGATAAAATATTTGTAAGAAAGGCAAAAATGTAAGAGTTCATATTAGGCATATATATAGAGACATGTTTTATCAATGATATAAAAATGATGTATTGGTGATATACTTTTGTATTGGTATATCGGTGATAGACTTATTAATGATAGCCAAAGCGAACATTGTTCGTCGATAATGGACATATATCTAAAACTAGGAGGTTGTGAGTTCGATCTCCCTCCTCTATATATTATACTAAAAAAAATTATCAATAATTTACTTCAATACATAAATAGTATATCAGTGATATACTTTATCAAAAATTAAAAATAGTATATTAATAATATAGTGGAGAAAAATTATCATATTTGTAAATTACTTTTTTGTGACGAATTTGAAAAGGTAACCAATTTTGACAAACTACCATATATAAAACACAAAACACATTGACATGTAAAGTCGTAATTTATGCACAAAGAGAAAATATTAATAAAACAAAATTTCCAAGTTGGTAACTTGCTAAAATAAAAATAAATTGTTATGTCAATATCGATTATAAAAACATTATGCTATTGGAGCTTTTAGAATAAAGTAATTACGTGGACTAAATGAAGCTATTTCGTAATACTAAAATAATGTTTTTTTATTGTCAAAAAAGAAGAAAGCAAAAAAGAAATAATACATTTTAATTTTTTTTAAAACAAATAGATTCGAAAACTCAAAGATTAAAGCGTAGTTTGTTTGAGAAATTTCATCTCATCATCTAAAAATAAACACATATCATTGTACGATCCATACACAAAATAATTCTATTAGTGACATATATCTTCAATCAAAAAATTGGATATTTGAATCCACAAAAAGAAGATTTTTTTTGTTTTTGTCTATAATAAGTCAAATTATAGTCAATATTTCATAAATGAATATTATTTTAAATATTTACAAATATTTTCATATTTGAATTGTAATATTTTGTTTTCAAATTGCTCTTAATTAATACAAATTAATTTAATGTGATCTATTTTGTATTTGAATAATTATATTTGATGTGATTCAAATCTTACCATATTTGGGTGGAAAAATTCTCTCATTCTCTATTTTTCTTCTGGCCAGAAACCGCCGTTACATTTCTTTTTCGGATGAATTTTTTCTAGCCTATTTTCTTTTTCCAACGGCTTTTTTTTAATAGTATGATAAATATATACTCCTCCAAAATATTTTTTCCATATTTTAATTATATTCTTCCCCTCATTATTTTGATAAACATATATTTATCCAAAATGTTATACAATATATATATTAGATTATATAACAATGGCTCTTATATAATATATTTTTCACTTTAATCTTCTAATATATAGAATAATAAACATATTGTTGAAACAGAAATTTCGGCCAATTACTAAATGCCACGTCACAATTTAAGGACAAATCACAAATTTACATGTGCCCTAAATTAATTTAAAATTGGTGAATCAAACTATGCCATGTGTCTCTTTTATAGCCGTCCGATGAAATCAACTAATTGGATCAAATCCATAAAGAGACTGGGCCCAAGCCTATGGCCCATTAAGCCCATGGCCCATATAAGACCCACCAAAACTCTATAAATAGAGGGGATCACCCTCATTCGGGGGGAGCAAGAAGAAAGAAGAAGAGCAGAAGAGCCAGAAGAAAGGGGGAAGAAGCCAAGAGGAAGAAGAATTGGAAGAGGTCTAGAAGAATTGGAGATTAAGAGCACTCATAATCGTCTACAATCCTTCGGAGTCAAGTGAAGCATCCAAAGCATCCTTCAGAGTCAAGTGAAGCATCCAAAGCCAACAAGATTGGAAGAATTAGAGACTTGAAGAGTACGAGACTTCAAGAACATTGAATATTCTCTCCCAAGCAACAATACTTGAAGACTCCATCAAACTGCAAAGTCTTCATCAAAACTGACTGAAGAACTTCAACAAGCAGCGCAAAGCCGAAGCACTTCACAGTCTGCAAAGCCGAAGAACTTCACAAGCTACAAAGCCGAAGAACTTCAACAAGCTGCAAAGTCGAAGCACTTCACAAGCTGCAAAGTCGAAACACTTCACAAGCTGCAAAGTCAAAGAACTTCACCAGCGCAAAGCCGAAGACTGTACAAAGTCTTCATCAAGCTACAAGCCAAAGAACTTCAACAAGCAGCGCAAAGCCGAAGCACTTCACACTCTGCAAAGCCGAAGAACTTCACAAGCTACAAAGCCGAAGAACTTCAACAAGCTGCAAAGTCGAAACACTTCACAAGCTGCAAAGTCGAAACACTTCACAAGCTGCAAAGTCAAAGAACTTCACCAGCGCAAAGCCGAAGACTGTACAAAGTCTTCATCAAGCTACAAGCCAAAGAACTTCATCAACAAGTCAAAGTCTTCAAACAAACTCAAAGCTGAAGACTTCGAAGATCCTTCATCAAGCGAGAAGCTGAAGGCATCAACCATTCAATAA

mRNA sequence

ATGAATCGCCGCCGTCAATTTGGTCCAAAGAGGCGGCGGTATCGGTCGCCGTCATTGAGGCCTAAACAAACGCGCAAAGCCGAAGCACTTCACAGTCTGCAAAGCCGAAGAACTTCACAAGCTACAAAGCCGAAGAACTTCAACAAGCTGCAAAGTCGAAGCACTTCACAAGCTGCAAAGTCGAAACACTTCACAAGCTGCAAAGTCAAAGAACTTCACCAGCGCAAAGCCGAAGACTGTACAAAGTCTTCATCAAGCTACAAGCCAAAGAACTTCAACAAGCAGCGCAAAGCCGAAGCACTTCACACTCTGCAAAGCCGAAGAACTTCACAAGCTACAAAGCCGAAGAACTTCAACAAGCTGCAAAGTCGAAACACTTCACAAGCTGCAAAGTCGAAACACTTCACAAGCTGCAAAGTCAAAGAACTTCACCAGCGCAAAGCCGAAGACTGTACAAAGTCTTCATCAAGCTACAAGCCAAAGAACTTCATCAACAAGTCAAAGTCTTCAAACAAACTCAAAGCTGAAGACTTCGAAGATCCTTCATCAAGCGAGAAGCTGAAGGCATCAACCATTCAATAA

Coding sequence (CDS)

ATGAATCGCCGCCGTCAATTTGGTCCAAAGAGGCGGCGGTATCGGTCGCCGTCATTGAGGCCTAAACAAACGCGCAAAGCCGAAGCACTTCACAGTCTGCAAAGCCGAAGAACTTCACAAGCTACAAAGCCGAAGAACTTCAACAAGCTGCAAAGTCGAAGCACTTCACAAGCTGCAAAGTCGAAACACTTCACAAGCTGCAAAGTCAAAGAACTTCACCAGCGCAAAGCCGAAGACTGTACAAAGTCTTCATCAAGCTACAAGCCAAAGAACTTCAACAAGCAGCGCAAAGCCGAAGCACTTCACACTCTGCAAAGCCGAAGAACTTCACAAGCTACAAAGCCGAAGAACTTCAACAAGCTGCAAAGTCGAAACACTTCACAAGCTGCAAAGTCGAAACACTTCACAAGCTGCAAAGTCAAAGAACTTCACCAGCGCAAAGCCGAAGACTGTACAAAGTCTTCATCAAGCTACAAGCCAAAGAACTTCATCAACAAGTCAAAGTCTTCAAACAAACTCAAAGCTGAAGACTTCGAAGATCCTTCATCAAGCGAGAAGCTGAAGGCATCAACCATTCAATAA

Protein sequence

MNRRRQFGPKRRRYRSPSLRPKQTRKAEALHSLQSRRTSQATKPKNFNKLQSRSTSQAAKSKHFTSCKVKELHQRKAEDCTKSSSSYKPKNFNKQRKAEALHTLQSRRTSQATKPKNFNKLQSRNTSQAAKSKHFTSCKVKELHQRKAEDCTKSSSSYKPKNFINKSKSSNKLKAEDFEDPSSSEKLKASTIQ

Homology

The following BLAST results are available for this feature:

BLAST of Moc09g08260 vs.


Match Name	E-value	Identity	Description

BLAST of Moc09g08260 vs.


Match Name	E-value	Identity	Description

BLAST of Moc09g08260 vs.


Match Name	E-value	Identity	Description

BLAST of Moc09g08260 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g08260.1	Moc09g08260.1	mRNA