Moc09g07630 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g07630
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	RNA-binding protein BRN1
Location	chr9: 6056057 .. 6061431 (+)
RNA-Seq Expression	Moc09g07630
Synteny	Moc09g07630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAGGTGTTAGAGAGAGAAGCGCGAGTCAGGAGGAGGAAGACAGCGTCAAACTCTTCGTTGGTCAAGTCCCGAAGCATATGTCCGAAACTCAGCTTCTCGCAATGTTCCAAGAGTTTGCTCTTGTAGACGAGGTCAACATCATCAGAGACAAGACCACTCGCGCCTCCCGAGGTTTTTGCTTTCATTACTTACTCACATTCTCTCTCTCTCTCTCTGTTTCTAATTCGTAATGTGCGATTCGTTTGATTTGGAGAGGAGTTGCGGACATTGTTTGCCGATTCACATTGTTAATTGATGAATTGAACCCTAAATTTGCTGTGCTTTGGGCTTGTTTGGTTACTACTGCATTTTCAGGCTGCTGTTTCGTGATATGTCCTTCGAGGCAAGAGGCGGATAAGGCGGTCAATGCTTGCCATAACAAAAAAACTTTACCTGGGGTTAGTGGAATCCGGATGTTTAGCTGTGAATAATTCTAATTTTGTTTCTCTCCTTTTTTGGTTTGTTTTTTTGTGTCTCTTCTCTCTTTCGTGTCGATAATGCTAATCAAATACGATTGATCGCTTCGATAGACTTGGCCTAGTGCGTAATCATCGATATCGATAACCTAGAAGTTTTAAAAGTCTTGGCTTTTCTGTAAAAGCTGCTTTCTAGTTTCTGACTACCGCACATTGTGATATATCCTATATTTAGAGTTAAAAAAATGAGCTAGGAAGCTCTCAACATCTCATGGACGCAACTCGAGCAGACCCTCGAAGCTTTCACTTTTTATCATTTCTTTTAAAAATTAAAATTCTTCAACTTTTTTTTTCAATATTAGTTTTATCAAATTATGCTTTACGAAATCAAACTCTAAACTCTCGAAGATAATACTGTTATCCTTCAGCATTGCATGACGGACACGCCTTTGCGATGAACCCAAAGAAATGGCAAAAAAAAAAAAAAAAGAACCTCTACAGATATGACTTACAAGATTGAGCTAAATAAGCCCTACAATGGAGCTGGAGTTGATCCCATTTTATGGTGTTGGTCTAAAATTTTGGAGCAATTATTTTCTGATGTAATTAATCTGCTTGTGATTAACCTTGTAAAGCTTCTCCTGTTTAATTTTCAATTGACATGGTGTCAATCATAGAGCGACAGGGTGCGATTTGAAGAAAATAACAAAAAGAATAATGCCACATGTTAGTATTTATTATGTGGGGTACAATATGGATTTTCAATAGATCAATAATATCACTGGTCACCATTGTTATGGTTAAATTATGTCAAAGTGCCGCGTTGGTTAGGAAATAATTGTAGAGCTGACTTGAAATAATTGTAGAGCTGACTTGAGACATTTTACCTGAAAGTACATTACCGATTCCTTTAGGAGCCTCTTAATGGAGTTTGTCAATTGATTAAATATTGGTGCAACGTTTAGGAAATAATCATAAGGTTGACACAAATCATTTATCTAGTTTATATAATTAATCCGGGCATTAATTTAGAACCTTAGATATTCTGAAATTTCAAGTGAATGTGAAGACATTCTCTATTCTGCCCTTGCCCTGGCCGTTGCACTAATTAAATTTGATCTTATAACCTGTCCTAAATCTTGTGATTGAATACATAGGACCAAGTCAAAACTAAAATATGCATAGCTAGACTGTAGGCAATTTCCCATATTACTTATATGCTACCATGAGTACTTTTAATTTATGTTTCTGTTAACTGTATAATTAAACAATGTTATTGTCAAATTGAGTAGTAACGACATGCTTTTTCTATTCGATCCAGGCATCTAGTCCGTTGCAAGTAAAATATGCAGATGGCGAGCTGGAAAGACTAGGTGTAATATCATATCCTGCTTTCATGTTTTATCTTTAAGATAGTTCATAATAGTTACCATTACCACCTACATTGCCATTTTCTTCATTGATCTTGTATTTGTCCATTTTTAGTATACATGGATAGTAATTGTTTATTATTTGTGGAAAAGAGCAGAACATAAACTCTTTATTGGCATGCTTCCGAAAAATGTATCTGAAGATGACGTTTCTGGTCTTTTCTCTCAATATGGAACTATAAAAGACTTGCAAATATTAAGAGGTTCGCAGCAGACAAGTAAAGGTAGTTTTGAGTTTGTTTCAGCTTGATTTTAGTCGAAGTTATGAAAGATAGCGCACATTCAGTTGTATCTTCACCATTAGCTCCATATGCTGGTCAAATGCAGGTTGTGCATTTTTAAAGTATGAGACGAAGGAGCAAGCAGTTGCAGCCCTAGAGGCAATTAATGGAAAGTACAAAATGGAGGTCCGTTAATTATCTACTTGTTTTGTGTCTGAATTGATTTTCTTGACCTATTGGATATTTTTACTTTTCAGGACATATTATTCTTCTTGCTTATATATTCATATTGTTATTGATATTTTGTTGACGCAATTGTTATTTCTCGAGATTTATTTGACATTTTCATGGCATTCTTTTGAAAAAAGATATTGCACCCTCTTGCTTATATATAATTGAAGAATTTAAGAACAATTACAAGTTTACCATGTGAGATAAAAAAAAACATCCATACCATATTGATTATTGATATTTTTTTGACACATTTATTATTTCTTTACATTTCTTTGACATTTTCATGGCATTCTTTTGGAAAAAGATATTACACCCTCTTGCTTATTTATAATTGAAACCTTCAATTTATGGGAATATCAATAATGAATTTATTCTATGCAAGATTGATCTTATGGAACGGTCATAATCACAATCACCAGATGGTATTGTGGCATGGACAAAATAACAATATATTTTCTTTCAGAAATTATAACTGGTTGGAATTTTTTCAGCAAGGATTTGACACACAAGTCAAATTGTCCAATTAGCTTTCTCGCACTCGCACCTGCAAGCATCTCTTTAGGGCCAACAATAATTTTATTGACCTAGGTTTTCAGGCGCTGGGATAATATTTTATGTTCTTTACTTCAGAGGAAGAGTATGAATGTACAAATACGTAGACATAATCACACAGGTGCAGGTTATAGAGGAATTGGATCTAATTATACTTTTTTAAACTCAGGGTTCTAGTGTCCCTTTGGTTGTTAAATGGGCTGACACGGAGAAGGAAAGGCAAGCACGGAAGGCTCAGAAAGCTCAATCACAGGGTTCTAATGTGCTTAATGCAGACTCCCAACATCCTTCACTATTTGGAGCCATGCCACTGGGTTATGTTCCGCCATATAATGGCTTTGGTTATCAGGTGAGTTTTGCAAAGGAATTATTCTTGGACTTCTTTTTCAGTATGTATGTATGTGCCATGTGCGAGATTTTTATCCCTTCTATTATTATTATTATTATTATTATTATTATTGTGGAGTGGTCTATGTTCTTGTCTTTTTGCTTGTCATGTGCGTCAGAAGAACATCATTCATATCTCTTTTAAGGTATATGAGTTACTAATGAATGTTTCAATCAGGTTATTCTGATCCATCATATTCAACTCGATTTCCTATTGAACGGTTTTTCATTTTCATGTTTCCAATTGATTGTTATGATATTGAAATACGAGGGTAGCTGATGATGGTCTCTTCTTTCTCTTTGTAGGCTCCTGGAAGTTATGGGCTTATGCAATATCACCTACCTCCAATACAGAATCAATCTGGTTTCCACAATATGATACCCCAACTAAACCAAGGAAATGCAATGCGTGGTATCCCGCCCGACCTCGGGCCGGGTATGGCTGCTAGGAATTATGGCATGCCTCCTGCAAGTTATGTTGGCTCTGCCTATCCTGGAGTTCCTGGTCTACAGCATCCCATGGCGTACCCTGGAGGAATGATGAGTCCCGGGGTTGTGAGCAGTTCACCTGGTTCAGGGCTACTTACTGGTGGGAAGAGTAACTCTCCAACGTCTAGTTTGGGTAAAGGCTCTGGGGGTCAGATCGAAGGTAGTTATATTTGTCATTGTGTGACCTTGATTTACAGATTGGTTTTTGAGTTTCTGGGAATTATAGTTCTCTCTCTTTTTTCTATAGGTCCACCTGGCGCTAATCTTTTTATTTATCACATACCCCAAGAATTTGGTGATCAGGAACTTGCTAATTCTTTTCGAGCATATGGCCGAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAATGTTTTGGTGAGCACCGGTTGATACCTTACAGTAGCAACAGAATAACTGGGCTCGAAACTTTTTCTTGCCGTTTTACACCTGCAACTTTGTGCAAAATACATGTTGATGATGAAAGTGTTTTGACCCCTCTTCTGTATTTCGCTACATGGAGACGTCTAACTGTGTTCCATATGCAGGGTTTGTTAGTTACGATTCGCCCGAGGCTGCCCAATCTGCCATAAGTATGATGAATGGATGCCAATTAGGTGGAAAGAAACTAAAAGTCCAGCTGAAGAGAGACAATAAACAGAGTAAACCATATTAATTCGGGTTCGGAGTAATGTCCTCGAAGGCAGCAAAGTTGGCTTACATGGGGCCTAAATGCATTATAGTCAGGGTGGATTGGGGACGGTCTGTGGTTAAAATTCATTACTCTCATCCTGCCTGTGATTGCATCATCAGATGAAATCAAAGATACTTGTAATTCACGGTTCGGCCACGCTGATACAATTTGTAATTTATGTATCTTGGAAGATTAACATTCTTTAATTGATTCTTCCGGGACATCTGTTGACTGTAAAATACAATGTAATTATAAATGATCTCCTGATTCTTTTAGGTTTATTTATTTGATACTGCCAAATTTGATGATGCTTTTGCCTTCTGGTTACTTCAAGCATATCTTGTTTTAGATAATCTATTACAAGACCACACTTTTTCTATAGAACTATGAGCCCGTTGAAGATGATCAAAATATTTTCGACTCGAACTGCAACAAGTCGTTTGATTTACGTCCTTGTTTTTTGTTTGATTGATGGCTTTCGTTGGTTTACATAAGACTTTGGTTCAGTGCACAACTTGTACAGAAATATGATTCTGATCAGGTGGTTCTTTTAAATTTTTTAATTTTATTTAATCCTCTAAATCTGATATTTTTTTGCAGCTTTCCAATTAAGAATGCCGGATGTTTGCCTCCTAGGAAACTCATCAGCTGTGGCATCAAACAGGTATTAAGTTTTTCTCGAGTCTGCATCAGTGATAGTTCATCGGTTTAGAGCTCGGTTCCTCCCAGAATATCTTGTATGTTGGAAAATCACATCTACTGACAATTGTTGTCGATCTAAGAGTAAGTTCTTAGGATTAAGTTATCGAACTTGGTTTGCTGCTTGTTATTTTCACAGTTATGATTGTAATGGACTCGACATCTTCAAATTGTCGATAACTTGGATCGGTTAA

mRNA sequence

ATGGCGGAAGGTGTTAGAGAGAGAAGCGCGAGTCAGGAGGAGGAAGACAGCGTCAAACTCTTCGTTGGTCAAGTCCCGAAGCATATGTCCGAAACTCAGCTTCTCGCAATGTTCCAAGAGTTTGCTCTTGTAGACGAGGTCAACATCATCAGAGACAAGACCACTCGCGCCTCCCGAGGCTGCTGTTTCGTGATATGTCCTTCGAGGCAAGAGGCGGATAAGGCGGTCAATGCTTGCCATAACAAAAAAACTTTACCTGGGGCATCTAGTCCGTTGCAAGTAAAATATGCAGATGGCGAGCTGGAAAGACTAGAACATAAACTCTTTATTGGCATGCTTCCGAAAAATGTATCTGAAGATGACGTTTCTGGTCTTTTCTCTCAATATGGAACTATAAAAGACTTGCAAATATTAAGAGGTTCGCAGCAGACAAGTAAAGGTTGTGCATTTTTAAAGTATGAGACGAAGGAGCAAGCAGTTGCAGCCCTAGAGGCAATTAATGGAAAGTACAAAATGGAGGGTTCTAGTGTCCCTTTGGTTGTTAAATGGGCTGACACGGAGAAGGAAAGGCAAGCACGGAAGGCTCAGAAAGCTCAATCACAGGGTTCTAATGTGCTTAATGCAGACTCCCAACATCCTTCACTATTTGGAGCCATGCCACTGGGTTATGTTCCGCCATATAATGGCTTTGGTTATCAGGCTCCTGGAAGTTATGGGCTTATGCAATATCACCTACCTCCAATACAGAATCAATCTGGTTTCCACAATATGATACCCCAACTAAACCAAGGAAATGCAATGCGTGGTATCCCGCCCGACCTCGGGCCGGGTATGGCTGCTAGGAATTATGGCATGCCTCCTGCAAGTTATGTTGGCTCTGCCTATCCTGGAGTTCCTGGTCTACAGCATCCCATGGCGTACCCTGGAGGAATGATGAGTCCCGGGGTTGTGAGCAGTTCACCTGGTTCAGGGCTACTTACTGGTGGGAAGAGTAACTCTCCAACGTCTAGTTTGGGTAAAGGCTCTGGGGGTCAGATCGAAGGTCCACCTGGCGCTAATCTTTTTATTTATCACATACCCCAAGAATTTGGTGATCAGGAACTTGCTAATTCTTTTCGAGCATATGGCCGAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAATGTTTTGGGTTTGTTAGTTACGATTCGCCCGAGGCTGCCCAATCTGCCATAACTTTCCAATTAAGAATGCCGGATGTTTGCCTCCTAGGAAACTCATCAGCTGTGGCATCAAACAGTTATGATTGTAATGGACTCGACATCTTCAAATTGTCGATAACTTGGATCGGTTAA

Coding sequence (CDS)

ATGGCGGAAGGTGTTAGAGAGAGAAGCGCGAGTCAGGAGGAGGAAGACAGCGTCAAACTCTTCGTTGGTCAAGTCCCGAAGCATATGTCCGAAACTCAGCTTCTCGCAATGTTCCAAGAGTTTGCTCTTGTAGACGAGGTCAACATCATCAGAGACAAGACCACTCGCGCCTCCCGAGGCTGCTGTTTCGTGATATGTCCTTCGAGGCAAGAGGCGGATAAGGCGGTCAATGCTTGCCATAACAAAAAAACTTTACCTGGGGCATCTAGTCCGTTGCAAGTAAAATATGCAGATGGCGAGCTGGAAAGACTAGAACATAAACTCTTTATTGGCATGCTTCCGAAAAATGTATCTGAAGATGACGTTTCTGGTCTTTTCTCTCAATATGGAACTATAAAAGACTTGCAAATATTAAGAGGTTCGCAGCAGACAAGTAAAGGTTGTGCATTTTTAAAGTATGAGACGAAGGAGCAAGCAGTTGCAGCCCTAGAGGCAATTAATGGAAAGTACAAAATGGAGGGTTCTAGTGTCCCTTTGGTTGTTAAATGGGCTGACACGGAGAAGGAAAGGCAAGCACGGAAGGCTCAGAAAGCTCAATCACAGGGTTCTAATGTGCTTAATGCAGACTCCCAACATCCTTCACTATTTGGAGCCATGCCACTGGGTTATGTTCCGCCATATAATGGCTTTGGTTATCAGGCTCCTGGAAGTTATGGGCTTATGCAATATCACCTACCTCCAATACAGAATCAATCTGGTTTCCACAATATGATACCCCAACTAAACCAAGGAAATGCAATGCGTGGTATCCCGCCCGACCTCGGGCCGGGTATGGCTGCTAGGAATTATGGCATGCCTCCTGCAAGTTATGTTGGCTCTGCCTATCCTGGAGTTCCTGGTCTACAGCATCCCATGGCGTACCCTGGAGGAATGATGAGTCCCGGGGTTGTGAGCAGTTCACCTGGTTCAGGGCTACTTACTGGTGGGAAGAGTAACTCTCCAACGTCTAGTTTGGGTAAAGGCTCTGGGGGTCAGATCGAAGGTCCACCTGGCGCTAATCTTTTTATTTATCACATACCCCAAGAATTTGGTGATCAGGAACTTGCTAATTCTTTTCGAGCATATGGCCGAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAATGTTTTGGGTTTGTTAGTTACGATTCGCCCGAGGCTGCCCAATCTGCCATAACTTTCCAATTAAGAATGCCGGATGTTTGCCTCCTAGGAAACTCATCAGCTGTGGCATCAAACAGTTATGATTGTAATGGACTCGACATCTTCAAATTGTCGATAACTTGGATCGGTTAA

Protein sequence

MAEGVRERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDDVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGLMQYHLPPIQNQSGFHNMIPQLNQGNAMRGIPPDLGPGMAARNYGMPPASYVGSAYPGVPGLQHPMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAITFQLRMPDVCLLGNSSAVASNSYDCNGLDIFKLSITWIG

Homology

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BLAST of Moc09g07630 vs. NCBI nr
Match: XP_022150171.1 (RNA-binding protein BRN1 [Momordica charantia])

HSP 1 Score: 817.4 bits (2110), Expect = 6.1e-233
Identity = 414/423 (97.87%), Postives = 416/423 (98.35%), Query Frame = 0


Query: 1   MAEGVRERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRG 60
           MAEGVRERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRG
Sbjct: 1   MAEGVRERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRG 60

Query: 61  CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSED 120
           CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSED
Sbjct: 61  CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSED 120

Query: 121 DVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLV 180
           DVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLV
Sbjct: 121 DVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLV 180

Query: 181 VKWADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGL 240
           VKWADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGL
Sbjct: 181 VKWADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGL 240

Query: 241 MQYHLPPIQNQSGFHNMIPQLNQGNAMRGIPPDLGPGMAARNYGMPPASYVGSAYPGVPG 300
           MQYHLPPIQNQSGFHNMIPQLNQGNAMRGIPPDLGPGMAARNYGMPPASYVGSAYPGVPG
Sbjct: 241 MQYHLPPIQNQSGFHNMIPQLNQGNAMRGIPPDLGPGMAARNYGMPPASYVGSAYPGVPG 300

Query: 301 LQHPMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIYHIP 360
           LQHPMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIYHIP
Sbjct: 301 LQHPMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIYHIP 360

Query: 361 QEFGDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAITFQLRMPDVC 420
           QEFGDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAI+    M + C
Sbjct: 361 QEFGDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAIS----MMNGC 419

Query: 421 LLG 424
            LG
Sbjct: 421 QLG 419

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BLAST of Moc09g07630 vs. NCBI nr
Match: XP_038900154.1 (RNA-binding protein BRN1 [Benincasa hispida])

HSP 1 Score: 755.4 bits (1949), Expect = 2.9e-214
Identity = 385/425 (90.59%), Postives = 399/425 (93.88%), Query Frame = 0


Query: 1   MAEGVR--ERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRAS 60
           MAEG R   + ++QEEEDSVKLFVGQVPK M+E QLLAMFQEFALVDEVNIIRDKTTRAS
Sbjct: 1   MAEGSRGERKESNQEEEDSVKLFVGQVPKLMTEAQLLAMFQEFALVDEVNIIRDKTTRAS 60

Query: 61  RGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVS 120
           RGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVS
Sbjct: 61  RGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVS 120

Query: 121 EDDVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVP 180
           ED+VS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETK+QAVAALEAINGK KMEGSSVP
Sbjct: 121 EDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVP 180

Query: 181 LVVKWADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSY 240
           LVVKWADTEKERQARKAQKAQSQ SNVLNADSQHPSLFGAMPLGYVPPYNG+GYQAPGSY
Sbjct: 181 LVVKWADTEKERQARKAQKAQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSY 240

Query: 241 GLMQYHLPPIQNQSGFHNMIPQLNQGNAMRGIPPDLGPGMAARNYGMPPASYVGSAYPGV 300
           GLMQYHLPP+QNQSG+ NMIPQLNQGNAMRGIPPDLGPGMA RNYGMPPA+YV SAYPGV
Sbjct: 241 GLMQYHLPPMQNQSGYPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPANYVSSAYPGV 300

Query: 301 PGLQHPMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIYH 360
           PGLQHPMAY GGMMSPGVVSSSPG G  TGGK+NSPTSSLGKGSGGQIEGPPGANLFIYH
Sbjct: 301 PGLQHPMAYAGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYH 360

Query: 361 IPQEFGDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAITFQLRMPD 420
           IPQEFGD ELANSFRA+GRVLSAKVFVDKTSGVSKCFGFVSYDS EAAQSAI+    M +
Sbjct: 361 IPQEFGDPELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAIS----MMN 420

Query: 421 VCLLG 424
            C LG
Sbjct: 421 GCQLG 421

[Close]

BLAST of Moc09g07630 vs. NCBI nr
Match: XP_008451423.1 (PREDICTED: RNA-binding protein BRN1 [Cucumis melo])

HSP 1 Score: 749.6 bits (1934), Expect = 1.6e-212
Identity = 382/420 (90.95%), Postives = 396/420 (94.29%), Query Frame = 0


Query: 4   GVRERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRGCCF 63
           G R+ S++QEEEDSVKLFVGQVPKHM+E QLL MFQEFALVDEVNIIRDKTTRASRGCCF
Sbjct: 8   GERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCF 67

Query: 64  VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDDVS 123
           VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSED+VS
Sbjct: 68  VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVS 127

Query: 124 GLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLVVKW 183
           GLFSQYGTIKDLQILRGSQQTSKGCAFLKYETK+QAVAALEAINGK KMEGSSVPLVVKW
Sbjct: 128 GLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKW 187

Query: 184 ADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGLMQY 243
           ADTEKERQARKAQKAQSQ +NVLNADSQHPSLFGAMPLGYVPPYNG+GYQAPGSYGLMQY
Sbjct: 188 ADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQY 247

Query: 244 HLPPIQNQSGFHNMIPQLNQGNAMRGIPPDLGPGMAARNYGMPPASYVGSAYPGVPGLQH 303
           HLPP+QNQSGF NMIPQLNQGNAMRGIPPDLGPGMA RNY MPPASY  SAYPGVP LQH
Sbjct: 248 HLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYPGVPALQH 307

Query: 304 PMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEF 363
           PMAYPGGMMSPGVVSSSPG G  TGGK NSPTSS+GKGSGGQIEGPPGANLFIYHIPQEF
Sbjct: 308 PMAYPGGMMSPGVVSSSPGPGPFTGGK-NSPTSSMGKGSGGQIEGPPGANLFIYHIPQEF 367

Query: 364 GDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAITFQLRMPDVCLLG 423
           GD+ELANSFRA+GRVLSAKVFVDKTSGVSKCFGFVSYDS EAAQSAI+    M + C LG
Sbjct: 368 GDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAIS----MMNGCQLG 420

[Close]

BLAST of Moc09g07630 vs. NCBI nr
Match: XP_004148884.1 (RNA-binding protein BRN1 [Cucumis sativus] >KGN44838.1 hypothetical protein Csa_016202 [Cucumis sativus])

HSP 1 Score: 748.4 bits (1931), Expect = 3.5e-212
Identity = 378/408 (92.65%), Postives = 391/408 (95.83%), Query Frame = 0


Query: 4   GVRERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRGCCF 63
           G R+ S++QEEEDSVKLFVGQVPKHM+E QLL MFQEFALVDEVNIIRDKTTRASRGCCF
Sbjct: 8   GERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCF 67

Query: 64  VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDDVS 123
           VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSED+VS
Sbjct: 68  VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVS 127

Query: 124 GLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLVVKW 183
           GLFSQYGTIKDLQILRGSQQTSKGCAFLKYETK+QAVAALEAINGK KMEGSSVPLVVKW
Sbjct: 128 GLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKW 187

Query: 184 ADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGLMQY 243
           ADTEKERQARKAQKAQSQ +NVLNADSQHPSLFGAMPLGYVPPYNG+GYQAPGSYGLMQY
Sbjct: 188 ADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQY 247

Query: 244 HLPPIQNQSGFHNMIPQLNQGNAMRGIPPDLGPGMAARNYGMPPASYVGSAYPGVPGLQH 303
           HLPP+QNQSGF NMIPQLNQGNAMRGIPPDLGPGMA RNY MPPASY  SAYPGVP LQH
Sbjct: 248 HLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYPGVPALQH 307

Query: 304 PMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEF 363
           PMAYPGGMMSPGVVSSSPG G  TGGK NSPTSS+GKGSGGQIEGPPGANLFIYHIPQEF
Sbjct: 308 PMAYPGGMMSPGVVSSSPGPGPFTGGK-NSPTSSMGKGSGGQIEGPPGANLFIYHIPQEF 367

Query: 364 GDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAIT 412
           GD+ELANSFRA+GRVLSAKVFVDKTSGVSKCFGFVSYDS EAAQSAI+
Sbjct: 368 GDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAIS 412

[Close]

BLAST of Moc09g07630 vs. NCBI nr
Match: XP_022953846.1 (RNA-binding protein BRN1-like [Cucurbita moschata])

HSP 1 Score: 745.0 bits (1922), Expect = 3.9e-211
Identity = 377/414 (91.06%), Postives = 391/414 (94.44%), Query Frame = 0


Query: 1   MAEGV---RERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRA 60
           MAEG      + +SQEEEDSVKLFVGQVPKHM+E QLLAMFQEFALVDEVNIIRDKTTRA
Sbjct: 1   MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRA 60

Query: 61  SRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNV 120
           SRGCCFVICPSRQEADKA+NACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNV
Sbjct: 61  SRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNV 120

Query: 121 SEDDVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSV 180
           SED+VS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETK+QAVAALEAINGK+KMEGSSV
Sbjct: 121 SEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSV 180

Query: 181 PLVVKWADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGS 240
           PLVVKWADTEKERQARKAQKAQSQ SNVLNADSQ  SLFGA+PLGY+PPYNG+GYQAPGS
Sbjct: 181 PLVVKWADTEKERQARKAQKAQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGS 240

Query: 241 YGLMQYHLPPIQNQSGFHNMIPQLNQGNAMRGIPPDLGPGMAARNYGMPPASYVGSAYPG 300
           YGLMQYHLPP+QNQSGF NMIPQLNQGNAMRGIPPDLGPGMA RNYGMPPASYVGSAYP 
Sbjct: 241 YGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA 300

Query: 301 VPGLQHPMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIY 360
           VPGLQHPMAYPGGMMSPGVVSSSPG    TGG +NSPTSSLGKGSG QIEGPPGANLFIY
Sbjct: 301 VPGLQHPMAYPGGMMSPGVVSSSPGP--FTGGNNNSPTSSLGKGSGSQIEGPPGANLFIY 360

Query: 361 HIPQEFGDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAIT 412
           HIPQEFGD ELANSFRA+GRVLSAKVFVDKTSGVSKCFGFVSYDS EAAQSAI+
Sbjct: 361 HIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSVEAAQSAIS 412

[Close]

BLAST of Moc09g07630 vs. ExPASy Swiss-Prot
Match: Q8LFS6 (RNA-binding protein BRN1 OS=Arabidopsis thaliana OX=3702 GN=BRN1 PE=2 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 4.1e-155
Identity = 287/414 (69.32%), Postives = 338/414 (81.64%), Query Frame = 0


Query: 1   MAEGVRERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRG 60
           MAE   E     EEE+SVKLFVGQ+PKHMSE+QLL +FQEFA+VDEVNII+DK TRASRG
Sbjct: 1   MAEAKEENREKNEEEESVKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRG 60

Query: 61  CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSED 120
           CCF++CPSR+EADK VNACHNKKTLPGA+S LQVKYADGELERLEHKLF+GMLPKNVSE 
Sbjct: 61  CCFLLCPSREEADKLVNACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEA 120

Query: 121 DVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLV 180
           +V  LFS+YGTIKDLQILRG+QQTSKGCAFLKYETKEQAV+A+E+INGK+KMEGS+VPLV
Sbjct: 121 EVQSLFSKYGTIKDLQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLV 180

Query: 181 VKWADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGY-QAPGSYG 240
           VKWADTE+ER  R+ QKAQS  + + N D  +PSLFGA+P+GYVPPYNG+GY Q PG+YG
Sbjct: 181 VKWADTERERHTRRLQKAQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG 240

Query: 241 LMQYHLPPIQNQSGFHNMIPQLNQG--NAMRGIPPD-LGPGMAARNYGMPPASYVGSAYP 300
              Y LPPIQNQ+ F NMI Q NQG  NA++G  PD + P +A RN+ MPP +Y+GS YP
Sbjct: 241 ---YMLPPIQNQAAFSNMIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPGNYMGSGYP 300

Query: 301 GVPGLQHPMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFI 360
            + G   P AYP G++SP  +SSSPGS  ++ G S      +G  S  Q EGP GANLFI
Sbjct: 301 AMRGHPFPFAYPRGIVSPRPLSSSPGS--ISPGMST--PLGIGLSSVVQTEGPEGANLFI 360

Query: 361 YHIPQEFGDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAI 411
           Y+IP+EFGDQELA +F+++G VLSAKVFVDK +GVSKCFGFVSYDS  AAQ+AI
Sbjct: 361 YNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAI 407

[Close]

BLAST of Moc09g07630 vs. ExPASy Swiss-Prot
Match: Q8GZ26 (RNA-binding protein BRN2 OS=Arabidopsis thaliana OX=3702 GN=BRN2 PE=1 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 1.0e-134
Identity = 253/407 (62.16%), Postives = 311/407 (76.41%), Query Frame = 0


Query: 11  SQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQ 70
           + E E+ VKLFVGQVPKHM+E QLL +F+EF++V+EVNII++KTTRA RGCCF+ CP+R+
Sbjct: 5   TMENEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTRE 64

Query: 71  EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDDVSGLFSQYG 130
           +ADK +N+ HNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSE +V  LFS+YG
Sbjct: 65  DADKVINSFHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSETEVQSLFSEYG 124

Query: 131 TIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLVVKWADTEKER 190
           TIKDLQILRGS QTSKGC FLKYE+KEQAVAA+EA+NG++ MEG++VPL+VKWADTEKER
Sbjct: 125 TIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKWADTEKER 184

Query: 191 QARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGLMQYHLPPIQN 250
           QAR+  K Q   S+V   D Q+PS+FGA+P+ YVPPYNG+GY  PG+YG   Y LPPIQ 
Sbjct: 185 QARRLLKVQ---SHVSRLDPQNPSMFGALPMSYVPPYNGYGYHVPGTYG---YMLPPIQT 244

Query: 251 QSGFHNMI-PQLNQGNAMRG------IPPDLGPGMAARNYGMPPASYVGSAYPGVPGLQH 310
           Q  FHN+I P    G A++G      +PP L P    RN+     +Y      G  GLQ+
Sbjct: 245 QHAFHNVISPNQGNGRALQGTALTESVPPRLAP---RRNFPTALGNY------GYHGLQY 304

Query: 311 PMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEF 370
           PMA+P GM+ P +  ++   G+   G   S  SSL      Q EGP GANLFIY+IP+EF
Sbjct: 305 PMAFPRGMIPPRLPLTTVSPGISNNG--TSIPSSL------QTEGPAGANLFIYNIPREF 364

Query: 371 GDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAI 411
            DQELA +F+ +G+VLSAKVFVDK +G+SKCFGF+SYDS  AAQ+AI
Sbjct: 365 EDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAI 388

[Close]

BLAST of Moc09g07630 vs. ExPASy Swiss-Prot
Match: Q9IBD0 (CUGBP Elav-like family member 1 OS=Danio rerio OX=7955 GN=celf1 PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.1e-62
Identity = 165/466 (35.41%), Postives = 241/466 (51.72%), Query Frame = 0


Query: 12  QEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTR--ASRGCCFVICPSR 71
           Q + DS+K+FVGQ+P+  SE QL  +F+ +  V E+N++RD++     S+GCCFV   +R
Sbjct: 10  QPDIDSIKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYTR 69

Query: 72  QEADKAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEDDVSGLFS 131
           + A +A NA HN K LPG   P+Q+K AD E      + KLF+GM+ K  +E+D+  +FS
Sbjct: 70  KSALEAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFVGMISKKCNENDIRLMFS 129

Query: 132 QYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLVVKWADTE 191
            YG I++ +ILRG    S+GCAF+ +  ++ A +A+++++    MEG S P+VVK+ADT+
Sbjct: 130 PYGQIEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQ 189

Query: 192 KERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLG--YVPPYNGFGYQAPGSYGLMQYHL 251
           K+++ ++  +   Q    LNA S   +L G   LG  Y+  Y     Q   S G    +L
Sbjct: 190 KDKEQKRIAQQLQQQMQQLNAASMWGNLTGLNSLGPQYLALYLQL-LQQSASSGNALNNL 249

Query: 252 PPIQNQSGFHNMIPQLNQGNAMRGIP-------PDLGPGMAARNYGMP---PASYVGSAY 311
            P+   +   N+       +A +  P           P     + G P   PA     AY
Sbjct: 250 HPMSGLNAMQNLAALAAAASATQATPTGSSALTTSSSPLSVLTSSGTPSGQPAQSAWDAY 309

Query: 312 -------PGVPGLQHPMAYPGGMMS------PGVVSSSPGS------GLLTGGKSNSPTS 371
                         +PMA  G + S       G+  SS  S      GL +GG SN   S
Sbjct: 310 KAGSSPTSSTSSSVNPMASLGALQSLAAGAGAGLNMSSLASMAALNGGLGSGGLSNGSGS 369

Query: 372 SLG--------------------------------KGSGGQIEGPPGANLFIYHIPQEFG 411
           ++                                   +G Q EGP GANLFIYH+PQEFG
Sbjct: 370 TMEALTQAAYSGIQQYAAAALPSLYSQSLLSQQNVSAAGSQKEGPEGANLFIYHLPQEFG 429

[Close]

BLAST of Moc09g07630 vs. ExPASy Swiss-Prot
Match: Q28HE9 (CUGBP Elav-like family member 1 OS=Xenopus tropicalis OX=8364 GN=celf1 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.5e-61
Identity = 164/461 (35.57%), Postives = 239/461 (51.84%), Query Frame = 0


Query: 14  EEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTR--ASRGCCFVICPSRQE 73
           + DS+K+FVGQVP+  SE +L  +F+++  V E+N++RD++     S+GCCF+   +R+ 
Sbjct: 12  DPDSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKA 71

Query: 74  ADKAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEDDVSGLFSQY 133
           A +A NA HN K LPG   P+Q+K AD E      + KLF+GM+ K  +E+D+  +FSQ+
Sbjct: 72  ALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFVGMVSKKCNENDIRAMFSQF 131

Query: 134 GTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLVVKWADTEKE 193
           G I++ +ILRG    S+GCAF+ + T+  A  A++A++    MEG S P+VVK+ADT+K+
Sbjct: 132 GQIEESRILRGPDGMSRGCAFVTFTTRSMAQMAIKAMHQAQTMEGCSSPIVVKFADTQKD 191

Query: 194 RQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGLMQYH-LPPI 253
           ++ ++  +   Q    LNA S   +L G   L   P Y     Q   S  L     L P+
Sbjct: 192 KEQKRMTQQLQQQMQQLNAASMWGNLAGLSSL--APQYLALLQQTASSGNLNSLSGLHPM 251

Query: 254 QNQ------SGFHNMIPQ------------LNQGNAMRGIPPDLGPGMAARNYGMPPASY 313
             +      SG + M  Q             N  +A   +     P     + G  P+S 
Sbjct: 252 GGEYATGMTSGLNAMQLQNLAALAAAASAAQNTPSAGSALTTSSSPLSILTSSGSSPSSN 311

Query: 314 VGSAYPGVPGLQHPMAYPGGMM-----SPGV-VSSSPGSGLLTGGKSNSPTSSLGK---- 373
             SA        +PMA  G +      + G+ V S  G   L GG  +S ++  G     
Sbjct: 312 NNSAV-------NPMASLGALQTLAGATAGLNVGSLAGMAALNGGLGSSLSNGTGSTMEA 371

Query: 374 -------------------------------GSGGQIEGPPGANLFIYHIPQEFGDQELA 411
                                           +G Q EGP GANLFIYH+PQEFGDQ+L 
Sbjct: 372 LSQAYSGIQQYAAAALPSLYNQSLLSQQGLGAAGSQKEGPEGANLFIYHLPQEFGDQDLL 431

[Close]

BLAST of Moc09g07630 vs. ExPASy Swiss-Prot
Match: Q6PF35 (CUGBP Elav-like family member 1-B OS=Xenopus laevis OX=8355 GN=cugbp1-b PE=2 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.7e-60
Identity = 163/462 (35.28%), Postives = 239/462 (51.73%), Query Frame = 0


Query: 14  EEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTR--ASRGCCFVICPSRQE 73
           + DS+K+FVGQVP+  SE +L  +F+++  V E+N++RD++     S+GCCF+   +R+ 
Sbjct: 12  DSDSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKA 71

Query: 74  ADKAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEDDVSGLFSQY 133
           A +A NA HN K LPG   P+Q+K AD E      + KLFIGM+ K  +E+D+  LFSQ+
Sbjct: 72  ALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMVSKKCNENDIRTLFSQF 131

Query: 134 GTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLVVKWADTEKE 193
           G I++ +ILRG    S+GCAF+ + T+  A  A++A++    MEG S P+VVK+ADT+K+
Sbjct: 132 GQIEESRILRGPDGMSRGCAFITFTTRSMAQMAIKAMHQAQTMEGCSSPIVVKFADTQKD 191

Query: 194 RQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGLMQYHLPPIQ 253
           ++ ++  +   Q    LNA S   +L G   L   P Y     Q   S  L         
Sbjct: 192 KEQKRMTQQLQQQMQQLNAASMWGNLAGLGSL--APQYLALLQQTTSSGNL--------N 251

Query: 254 NQSGFHNMIPQLNQG-----NAM--RGIPPDLGPGMAARNYGMPPASYVGSAYP------ 313
           + SG H M  +   G     NAM  + +        AA+N     ++   S+ P      
Sbjct: 252 SLSGLHPMGGEYATGMTSGLNAMQLQNLATLAAAASAAQNTQSAGSALASSSSPLSILTS 311

Query: 314 -------GVPGLQHPMAYPGGMM-----SPGV-VSSSPGSGLLTGGKSNSPTSSLGK--- 373
                      + H MA  G +      + G+ V S  G   L GG  +S ++  G    
Sbjct: 312 SGSSPNSNNSSINH-MASLGALQTLAGATAGLNVGSLAGMAALNGGLGSSLSNGTGSTME 371

Query: 374 --------------------------------GSGGQIEGPPGANLFIYHIPQEFGDQEL 411
                                            +G Q EGP GANLFIYH+PQEFGDQ+L
Sbjct: 372 ALSQAYSGIQQYAAAALPSLYNQSLLSQQGLGAAGSQKEGPEGANLFIYHLPQEFGDQDL 431

[Close]

BLAST of Moc09g07630 vs. ExPASy TrEMBL
Match: A0A6J1DAN8 (RNA-binding protein BRN1 OS=Momordica charantia OX=3673 GN=LOC111018416 PE=4 SV=1)

HSP 1 Score: 817.4 bits (2110), Expect = 3.0e-233
Identity = 414/423 (97.87%), Postives = 416/423 (98.35%), Query Frame = 0


Query: 1   MAEGVRERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRG 60
           MAEGVRERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRG
Sbjct: 1   MAEGVRERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRG 60

Query: 61  CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSED 120
           CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSED
Sbjct: 61  CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSED 120

Query: 121 DVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLV 180
           DVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLV
Sbjct: 121 DVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLV 180

Query: 181 VKWADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGL 240
           VKWADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGL
Sbjct: 181 VKWADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGL 240

Query: 241 MQYHLPPIQNQSGFHNMIPQLNQGNAMRGIPPDLGPGMAARNYGMPPASYVGSAYPGVPG 300
           MQYHLPPIQNQSGFHNMIPQLNQGNAMRGIPPDLGPGMAARNYGMPPASYVGSAYPGVPG
Sbjct: 241 MQYHLPPIQNQSGFHNMIPQLNQGNAMRGIPPDLGPGMAARNYGMPPASYVGSAYPGVPG 300

Query: 301 LQHPMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIYHIP 360
           LQHPMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIYHIP
Sbjct: 301 LQHPMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIYHIP 360

Query: 361 QEFGDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAITFQLRMPDVC 420
           QEFGDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAI+    M + C
Sbjct: 361 QEFGDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAIS----MMNGC 419

Query: 421 LLG 424
            LG
Sbjct: 421 QLG 419

[Close]

BLAST of Moc09g07630 vs. ExPASy TrEMBL
Match: A0A1S3BRF9 (RNA-binding protein BRN1 OS=Cucumis melo OX=3656 GN=LOC103492722 PE=4 SV=1)

HSP 1 Score: 749.6 bits (1934), Expect = 7.6e-213
Identity = 382/420 (90.95%), Postives = 396/420 (94.29%), Query Frame = 0


Query: 4   GVRERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRGCCF 63
           G R+ S++QEEEDSVKLFVGQVPKHM+E QLL MFQEFALVDEVNIIRDKTTRASRGCCF
Sbjct: 8   GERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCF 67

Query: 64  VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDDVS 123
           VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSED+VS
Sbjct: 68  VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVS 127

Query: 124 GLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLVVKW 183
           GLFSQYGTIKDLQILRGSQQTSKGCAFLKYETK+QAVAALEAINGK KMEGSSVPLVVKW
Sbjct: 128 GLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKW 187

Query: 184 ADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGLMQY 243
           ADTEKERQARKAQKAQSQ +NVLNADSQHPSLFGAMPLGYVPPYNG+GYQAPGSYGLMQY
Sbjct: 188 ADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQY 247

Query: 244 HLPPIQNQSGFHNMIPQLNQGNAMRGIPPDLGPGMAARNYGMPPASYVGSAYPGVPGLQH 303
           HLPP+QNQSGF NMIPQLNQGNAMRGIPPDLGPGMA RNY MPPASY  SAYPGVP LQH
Sbjct: 248 HLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYPGVPALQH 307

Query: 304 PMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEF 363
           PMAYPGGMMSPGVVSSSPG G  TGGK NSPTSS+GKGSGGQIEGPPGANLFIYHIPQEF
Sbjct: 308 PMAYPGGMMSPGVVSSSPGPGPFTGGK-NSPTSSMGKGSGGQIEGPPGANLFIYHIPQEF 367

Query: 364 GDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAITFQLRMPDVCLLG 423
           GD+ELANSFRA+GRVLSAKVFVDKTSGVSKCFGFVSYDS EAAQSAI+    M + C LG
Sbjct: 368 GDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAIS----MMNGCQLG 420

[Close]

BLAST of Moc09g07630 vs. ExPASy TrEMBL
Match: A0A0A0K5R5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G390170 PE=4 SV=1)

HSP 1 Score: 748.4 bits (1931), Expect = 1.7e-212
Identity = 378/408 (92.65%), Postives = 391/408 (95.83%), Query Frame = 0


Query: 4   GVRERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRGCCF 63
           G R+ S++QEEEDSVKLFVGQVPKHM+E QLL MFQEFALVDEVNIIRDKTTRASRGCCF
Sbjct: 8   GERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCF 67

Query: 64  VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDDVS 123
           VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSED+VS
Sbjct: 68  VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVS 127

Query: 124 GLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLVVKW 183
           GLFSQYGTIKDLQILRGSQQTSKGCAFLKYETK+QAVAALEAINGK KMEGSSVPLVVKW
Sbjct: 128 GLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKW 187

Query: 184 ADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGLMQY 243
           ADTEKERQARKAQKAQSQ +NVLNADSQHPSLFGAMPLGYVPPYNG+GYQAPGSYGLMQY
Sbjct: 188 ADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQY 247

Query: 244 HLPPIQNQSGFHNMIPQLNQGNAMRGIPPDLGPGMAARNYGMPPASYVGSAYPGVPGLQH 303
           HLPP+QNQSGF NMIPQLNQGNAMRGIPPDLGPGMA RNY MPPASY  SAYPGVP LQH
Sbjct: 248 HLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYPGVPALQH 307

Query: 304 PMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEF 363
           PMAYPGGMMSPGVVSSSPG G  TGGK NSPTSS+GKGSGGQIEGPPGANLFIYHIPQEF
Sbjct: 308 PMAYPGGMMSPGVVSSSPGPGPFTGGK-NSPTSSMGKGSGGQIEGPPGANLFIYHIPQEF 367

Query: 364 GDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAIT 412
           GD+ELANSFRA+GRVLSAKVFVDKTSGVSKCFGFVSYDS EAAQSAI+
Sbjct: 368 GDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAIS 412

[Close]

BLAST of Moc09g07630 vs. ExPASy TrEMBL
Match: A0A6J1GP82 (RNA-binding protein BRN1-like OS=Cucurbita moschata OX=3662 GN=LOC111456261 PE=4 SV=1)

HSP 1 Score: 745.0 bits (1922), Expect = 1.9e-211
Identity = 377/414 (91.06%), Postives = 391/414 (94.44%), Query Frame = 0


Query: 1   MAEGV---RERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRA 60
           MAEG      + +SQEEEDSVKLFVGQVPKHM+E QLLAMFQEFALVDEVNIIRDKTTRA
Sbjct: 1   MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRA 60

Query: 61  SRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNV 120
           SRGCCFVICPSRQEADKA+NACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNV
Sbjct: 61  SRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNV 120

Query: 121 SEDDVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSV 180
           SED+VS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETK+QAVAALEAINGK+KMEGSSV
Sbjct: 121 SEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSV 180

Query: 181 PLVVKWADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGS 240
           PLVVKWADTEKERQARKAQKAQSQ SNVLNADSQ  SLFGA+PLGY+PPYNG+GYQAPGS
Sbjct: 181 PLVVKWADTEKERQARKAQKAQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGS 240

Query: 241 YGLMQYHLPPIQNQSGFHNMIPQLNQGNAMRGIPPDLGPGMAARNYGMPPASYVGSAYPG 300
           YGLMQYHLPP+QNQSGF NMIPQLNQGNAMRGIPPDLGPGMA RNYGMPPASYVGSAYP 
Sbjct: 241 YGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA 300

Query: 301 VPGLQHPMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIY 360
           VPGLQHPMAYPGGMMSPGVVSSSPG    TGG +NSPTSSLGKGSG QIEGPPGANLFIY
Sbjct: 301 VPGLQHPMAYPGGMMSPGVVSSSPGP--FTGGNNNSPTSSLGKGSGSQIEGPPGANLFIY 360

Query: 361 HIPQEFGDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAIT 412
           HIPQEFGD ELANSFRA+GRVLSAKVFVDKTSGVSKCFGFVSYDS EAAQSAI+
Sbjct: 361 HIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSVEAAQSAIS 412

[Close]

BLAST of Moc09g07630 vs. ExPASy TrEMBL
Match: A0A5A7UR22 (RNA-binding protein BRN1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00150 PE=4 SV=1)

HSP 1 Score: 734.2 bits (1894), Expect = 3.3e-208
Identity = 382/438 (87.21%), Postives = 396/438 (90.41%), Query Frame = 0


Query: 4   GVRERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRG--- 63
           G R+ S++QEEEDSVKLFVGQVPKHM+E QLL MFQEFALVDEVNIIRDKTTRASRG   
Sbjct: 8   GERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGVFF 67

Query: 64  --------------CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL-E 123
                         CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL E
Sbjct: 68  FFFSPFDFNFNYFSCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLAE 127

Query: 124 HKLFIGMLPKNVSEDDVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEA 183
           HKLFIGMLPKNVSED+VSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETK+QAVAALEA
Sbjct: 128 HKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEA 187

Query: 184 INGKYKMEGSSVPLVVKWADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVP 243
           INGK KMEGSSVPLVVKWADTEKERQARKAQKAQSQ +NVLNADSQHPSLFGAMPLGYVP
Sbjct: 188 INGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVP 247

Query: 244 PYNGFGYQAPGSYGLMQYHLPPIQNQSGFHNMIPQLNQGNAMRGIPPDLGPGMAARNYGM 303
           PYNG+GYQAPGSYGLMQYHLPP+QNQSGF NMIPQLNQGNAMRGIPPDLGPGMA RNY M
Sbjct: 248 PYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAM 307

Query: 304 PPASYVGSAYPGVPGLQHPMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQ 363
           PPASY  SAYPGVP LQHPMAYPGGMMSPGVVSSSPG G  TGGK NSPTSS+GKGSGGQ
Sbjct: 308 PPASY--SAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGK-NSPTSSMGKGSGGQ 367

Query: 364 IEGPPGANLFIYHIPQEFGDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEA 423
           IEGPPGANLFIYHIPQEFGD+ELANSFRA+GRVLSAKVFVDKTSGVSKCFGFVSYDS EA
Sbjct: 368 IEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEA 427

[Close]

BLAST of Moc09g07630 vs. TAIR 10
Match: AT4G03110.1 (RNA-binding protein-defense related 1 )

HSP 1 Score: 549.3 bits (1414), Expect = 2.9e-156
Identity = 287/414 (69.32%), Postives = 338/414 (81.64%), Query Frame = 0


Query: 1   MAEGVRERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRG 60
           MAE   E     EEE+SVKLFVGQ+PKHMSE+QLL +FQEFA+VDEVNII+DK TRASRG
Sbjct: 1   MAEAKEENREKNEEEESVKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRG 60

Query: 61  CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSED 120
           CCF++CPSR+EADK VNACHNKKTLPGA+S LQVKYADGELERLEHKLF+GMLPKNVSE 
Sbjct: 61  CCFLLCPSREEADKLVNACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEA 120

Query: 121 DVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLV 180
           +V  LFS+YGTIKDLQILRG+QQTSKGCAFLKYETKEQAV+A+E+INGK+KMEGS+VPLV
Sbjct: 121 EVQSLFSKYGTIKDLQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLV 180

Query: 181 VKWADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGY-QAPGSYG 240
           VKWADTE+ER  R+ QKAQS  + + N D  +PSLFGA+P+GYVPPYNG+GY Q PG+YG
Sbjct: 181 VKWADTERERHTRRLQKAQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG 240

Query: 241 LMQYHLPPIQNQSGFHNMIPQLNQG--NAMRGIPPD-LGPGMAARNYGMPPASYVGSAYP 300
              Y LPPIQNQ+ F NMI Q NQG  NA++G  PD + P +A RN+ MPP +Y+GS YP
Sbjct: 241 ---YMLPPIQNQAAFSNMIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPGNYMGSGYP 300

Query: 301 GVPGLQHPMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFI 360
            + G   P AYP G++SP  +SSSPGS  ++ G S      +G  S  Q EGP GANLFI
Sbjct: 301 AMRGHPFPFAYPRGIVSPRPLSSSPGS--ISPGMST--PLGIGLSSVVQTEGPEGANLFI 360

Query: 361 YHIPQEFGDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAI 411
           Y+IP+EFGDQELA +F+++G VLSAKVFVDK +GVSKCFGFVSYDS  AAQ+AI
Sbjct: 361 YNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAI 407

[Close]

BLAST of Moc09g07630 vs. TAIR 10
Match: AT4G03110.2 (RNA-binding protein-defense related 1 )

HSP 1 Score: 536.2 bits (1380), Expect = 2.5e-152
Identity = 277/404 (68.56%), Postives = 329/404 (81.44%), Query Frame = 0


Query: 1   MAEGVRERSASQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRG 60
           MAE   E     EEE+SVKLFVGQ+PKHMSE+QLL +FQEFA+VDEVNII+DK TRASRG
Sbjct: 1   MAEAKEENREKNEEEESVKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRG 60

Query: 61  CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSED 120
           CCF++CPSR+EADK VNACHNKKTLPGA+S LQVKYADGELERLEHKLF+GMLPKNVSE 
Sbjct: 61  CCFLLCPSREEADKLVNACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEA 120

Query: 121 DVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLV 180
           +V  LFS+YGTIKDLQILRG+QQTSKGCAFLKYETKEQAV+A+E+INGK+KMEGS+VPLV
Sbjct: 121 EVQSLFSKYGTIKDLQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLV 180

Query: 181 VKWADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGL 240
           VKWADTE+ER  R+ QKAQS  + + N D  +PSLFGA+P+GYVPPYNG+GY  PG+YG 
Sbjct: 181 VKWADTERERHTRRLQKAQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYGYHPPGTYG- 240

Query: 241 MQYHLPPIQNQSGFHNMIPQLNQG--NAMRGIPPD-LGPGMAARNYGMPPASYVGSAYPG 300
             Y LPPIQNQ+ F NMI Q NQG  NA++G  PD + P +A RN+ MPP +Y+GS YP 
Sbjct: 241 --YMLPPIQNQAAFSNMIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPGNYMGSGYPA 300

Query: 301 VPGLQHPMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIY 360
           + G   P AYP G++SP  +SSSPGS  ++ G S      +G  S  Q EGP GANLFIY
Sbjct: 301 MRGHPFPFAYPRGIVSPRPLSSSPGS--ISPGMST--PLGIGLSSVVQTEGPEGANLFIY 360

Query: 361 HIPQEFGDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYD 402
           +IP+EFGDQELA +F+++G VLSAKVFVDK +GVSKCFG +S+D
Sbjct: 361 NIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGKLSFD 397

[Close]

BLAST of Moc09g07630 vs. TAIR 10
Match: AT1G03457.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 481.5 bits (1238), Expect = 7.4e-136
Identity = 253/407 (62.16%), Postives = 311/407 (76.41%), Query Frame = 0


Query: 11  SQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQ 70
           + E E+ VKLFVGQVPKHM+E QLL +F+EF++V+EVNII++KTTRA RGCCF+ CP+R+
Sbjct: 5   TMENEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTRE 64

Query: 71  EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDDVSGLFSQYG 130
           +ADK +N+ HNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSE +V  LFS+YG
Sbjct: 65  DADKVINSFHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSETEVQSLFSEYG 124

Query: 131 TIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLVVKWADTEKER 190
           TIKDLQILRGS QTSKGC FLKYE+KEQAVAA+EA+NG++ MEG++VPL+VKWADTEKER
Sbjct: 125 TIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKWADTEKER 184

Query: 191 QARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGLMQYHLPPIQN 250
           QAR+  K Q   S+V   D Q+PS+FGA+P+ YVPPYNG+GY  PG+YG   Y LPPIQ 
Sbjct: 185 QARRLLKVQ---SHVSRLDPQNPSMFGALPMSYVPPYNGYGYHVPGTYG---YMLPPIQT 244

Query: 251 QSGFHNMI-PQLNQGNAMRG------IPPDLGPGMAARNYGMPPASYVGSAYPGVPGLQH 310
           Q  FHN+I P    G A++G      +PP L P    RN+     +Y      G  GLQ+
Sbjct: 245 QHAFHNVISPNQGNGRALQGTALTESVPPRLAP---RRNFPTALGNY------GYHGLQY 304

Query: 311 PMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEF 370
           PMA+P GM+ P +  ++   G+   G   S  SSL      Q EGP GANLFIY+IP+EF
Sbjct: 305 PMAFPRGMIPPRLPLTTVSPGISNNG--TSIPSSL------QTEGPAGANLFIYNIPREF 364

Query: 371 GDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAI 411
            DQELA +F+ +G+VLSAKVFVDK +G+SKCFGF+SYDS  AAQ+AI
Sbjct: 365 EDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAI 388

[Close]

BLAST of Moc09g07630 vs. TAIR 10
Match: AT1G03457.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 473.8 bits (1218), Expect = 1.6e-133
Identity = 253/416 (60.82%), Postives = 311/416 (74.76%), Query Frame = 0


Query: 11  SQEEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQ 70
           + E E+ VKLFVGQVPKHM+E QLL +F+EF++V+EVNII++KTTRA RGCCF+ CP+R+
Sbjct: 5   TMENEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTRE 64

Query: 71  EADKAVNACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEDD 130
           +ADK +N+ HNKKTLPGASSPLQVKYADGELERL         EHKLF+GMLPKNVSE +
Sbjct: 65  DADKVINSFHNKKTLPGASSPLQVKYADGELERLDVLDCSCNPEHKLFVGMLPKNVSETE 124

Query: 131 VSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLVV 190
           V  LFS+YGTIKDLQILRGS QTSKGC FLKYE+KEQAVAA+EA+NG++ MEG++VPL+V
Sbjct: 125 VQSLFSEYGTIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIV 184

Query: 191 KWADTEKERQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGLM 250
           KWADTEKERQAR+  K Q   S+V   D Q+PS+FGA+P+ YVPPYNG+GY  PG+YG  
Sbjct: 185 KWADTEKERQARRLLKVQ---SHVSRLDPQNPSMFGALPMSYVPPYNGYGYHVPGTYG-- 244

Query: 251 QYHLPPIQNQSGFHNMI-PQLNQGNAMRG------IPPDLGPGMAARNYGMPPASYVGSA 310
            Y LPPIQ Q  FHN+I P    G A++G      +PP L P    RN+     +Y    
Sbjct: 245 -YMLPPIQTQHAFHNVISPNQGNGRALQGTALTESVPPRLAP---RRNFPTALGNY---- 304

Query: 311 YPGVPGLQHPMAYPGGMMSPGVVSSSPGSGLLTGGKSNSPTSSLGKGSGGQIEGPPGANL 370
             G  GLQ+PMA+P GM+ P +  ++   G+   G   S  SSL      Q EGP GANL
Sbjct: 305 --GYHGLQYPMAFPRGMIPPRLPLTTVSPGISNNG--TSIPSSL------QTEGPAGANL 364

Query: 371 FIYHIPQEFGDQELANSFRAYGRVLSAKVFVDKTSGVSKCFGFVSYDSPEAAQSAI 411
           FIY+IP+EF DQELA +F+ +G+VLSAKVFVDK +G+SKCFGF+SYDS  AAQ+AI
Sbjct: 365 FIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAI 397

[Close]

BLAST of Moc09g07630 vs. TAIR 10
Match: AT4G16280.2 (RNA binding;abscisic acid binding )

HSP 1 Score: 160.2 bits (404), Expect = 3.8e-39
Identity = 109/322 (33.85%), Postives = 169/322 (52.48%), Query Frame = 0


Query: 13  EEEDSVKLFVGQVPKHMSETQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEA 72
           +   +VKLFVG VP+  +E ++   F++   V EV +I+DK T   +GCCFV   + ++A
Sbjct: 115 DRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDA 174

Query: 73  DKAVNACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEDDVSGLFSQY 132
           D+A+ A HN+ TLPG + P+QV+YADGE ER   LE KLF+G L K  +E +V  +F Q+
Sbjct: 175 DRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQF 234

Query: 133 GTIKDLQILRGSQQTSKGCAFLKYETKEQAVAALEAINGKYKMEGSSVPLVVKWADTEKE 192
           G ++D+ ++R   + S+GC F+KY +KE A+AA++ +NG Y M G + PL+V++A+ ++ 
Sbjct: 235 GHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRP 294

Query: 193 RQARKAQKAQSQGSNVLNADSQHPSLFGAMPLGYVPPYNGFGYQAPGSYGLMQ---YHLP 252
           +     + A   G                  LG  P +   G +   ++G       H  
Sbjct: 295 KPGESREMAPPVG------------------LGSGPRFQASGPRPTSNFGDSSGDVSHTN 354

Query: 253 PIQNQSGFHNMIPQLNQGNAMRGIPPDLG--PGMAA--RNYGMPPASYVGSAYPGVPGLQ 312
           P +  +   N+ P  N G  +RG   D    PG A    N G P   Y      GVP L 
Sbjct: 355 PWRPATS-RNVGPPSNTG--IRGAGSDFSPKPGQATLPSNQGGPLGGY------GVPPL- 408

Query: 313 HPMAYPGGMMSPGVVSSSPGSG 325
           +P+  PG   S  +   +  +G
Sbjct: 415 NPLPVPGVSSSATLQQQNRAAG 408

The following BLAST results are available for this feature:

BLAST of Moc09g07630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150171.1	6.1e-233	97.87	RNA-binding protein BRN1 [Momordica charantia]	[more]
XP_038900154.1	2.9e-214	90.59	RNA-binding protein BRN1 [Benincasa hispida]	[more]
XP_008451423.1	1.6e-212	90.95	PREDICTED: RNA-binding protein BRN1 [Cucumis melo]	[more]
XP_004148884.1	3.5e-212	92.65	RNA-binding protein BRN1 [Cucumis sativus] >KGN44838.1 hypothetical protein Csa_...	[more]
XP_022953846.1	3.9e-211	91.06	RNA-binding protein BRN1-like [Cucurbita moschata]	[more]

BLAST of Moc09g07630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFS6	4.1e-155	69.32	RNA-binding protein BRN1 OS=Arabidopsis thaliana OX=3702 GN=BRN1 PE=2 SV=1	[more]
Q8GZ26	1.0e-134	62.16	RNA-binding protein BRN2 OS=Arabidopsis thaliana OX=3702 GN=BRN2 PE=1 SV=1	[more]
Q9IBD0	9.1e-62	35.41	CUGBP Elav-like family member 1 OS=Danio rerio OX=7955 GN=celf1 PE=1 SV=1	[more]
Q28HE9	1.5e-61	35.57	CUGBP Elav-like family member 1 OS=Xenopus tropicalis OX=8364 GN=celf1 PE=2 SV=1	[more]
Q6PF35	1.7e-60	35.28	CUGBP Elav-like family member 1-B OS=Xenopus laevis OX=8355 GN=cugbp1-b PE=2 SV=...	[more]

BLAST of Moc09g07630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAN8	3.0e-233	97.87	RNA-binding protein BRN1 OS=Momordica charantia OX=3673 GN=LOC111018416 PE=4 SV=...	[more]
A0A1S3BRF9	7.6e-213	90.95	RNA-binding protein BRN1 OS=Cucumis melo OX=3656 GN=LOC103492722 PE=4 SV=1	[more]
A0A0A0K5R5	1.7e-212	92.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G390170 PE=4 SV=1	[more]
A0A6J1GP82	1.9e-211	91.06	RNA-binding protein BRN1-like OS=Cucurbita moschata OX=3662 GN=LOC111456261 PE=4...	[more]
A0A5A7UR22	3.3e-208	87.21	RNA-binding protein BRN1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of Moc09g07630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03110.1	2.9e-156	69.32	RNA-binding protein-defense related 1	[more]
AT4G03110.2	2.5e-152	68.56	RNA-binding protein-defense related 1	[more]
AT1G03457.1	7.4e-136	62.16	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G03457.2	1.6e-133	60.82	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G16280.2	3.8e-39	33.85	RNA binding;abscisic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002343	Paraneoplastic encephalomyelitis antigen	PRINTS	PR00961	HUDSXLRNA	coord: 18..33 score: 25.42 coord: 126..138 score: 52.82 coord: 111..126 score: 30.21 coord: 167..184 score: 34.26
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 19..95 e-value: 3.0E-16 score: 70.0 coord: 107..182 e-value: 1.5E-18 score: 77.6 coord: 353..429 e-value: 5.7E-11 score: 52.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 20..84 e-value: 2.3E-12 score: 46.6 coord: 354..410 e-value: 4.0E-11 score: 42.6 coord: 108..172 e-value: 8.0E-17 score: 60.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 352..433 score: 13.003776
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 106..186 score: 16.3978
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 18..99 score: 13.566604
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 5..102 e-value: 5.8E-24 score: 86.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 328..418 e-value: 1.9E-17 score: 65.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 103..195 e-value: 3.5E-25 score: 90.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 318..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 318..342
None	No IPR available	PANTHER	PTHR24012	RNA BINDING PROTEIN	coord: 12..411
None	No IPR available	PANTHER	PTHR24012:SF844	RNA-BINDING PROTEIN-DEFENSE RELATED 1-RELATED	coord: 12..411
None	No IPR available	CDD	cd12361	RRM1_2_CELF1-6_like	coord: 19..95 e-value: 1.59937E-38 score: 132.286
None	No IPR available	CDD	cd12361	RRM1_2_CELF1-6_like	coord: 107..182 e-value: 3.1835E-36 score: 126.123
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 106..411
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 9..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g07630.1	Moc09g07630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding