Moc09g06830 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g06830
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ankyrin repeat protein
Location	chr9: 5385627 .. 5386214 (-)
RNA-Seq Expression	Moc09g06830
Synteny	Moc09g06830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATGGCCAGAGGCTCTAAGCTTTTTCACATCCTTTTCTTAATTTTTGTTTGGCAGTTTTGTGGGGAGGTGGGTGCCACTTTCAACGATGTCACTGGAGAGGCTGACCTCGATCGCCCTTTTTCCTTCCGTGCATTCGGGTCGCATGGTCCTATAGGAGCACCGGTGCAGAGTCCTATGGGAGCACCGGTACAGGGTCCTACAGCAGCAACGAGTCCAGTGGAGGGTCCTGTTGCAGCAGAAATGAGTCCGGTGGAGGGTCCTGCAGCCGCAAGTCCGATGGATGGTCCAGTTGCAGGAGCAGCGAATCCCGTTGAGGGTCCAGCCGCAGGAGCAGCGAGTCCCGTTGAGGGTCCCACCGCCATAGGGGCAGCGAGTCCCGTTGAGGGTCCCGCCGTCGCAGGTGAGGGTCCCGCTGCCATAGTTGGGGGTCCCGCCGTCGCATTTGGGGGTCCCGCTGCAGGAGCCGCTCCCATTGAGGGTCCTGCTCCAGTTGAGGGTCCCGCTCCAGTTGAGGGTCCCGCCGCAGGGGTCGCTCCAGTTGAGGGTCCCGCTGGAGGGACAGCTCCAGTGCAGAGTTCATGA

mRNA sequence

ATGGCAATGGCCAGAGGCTCTAAGCTTTTTCACATCCTTTTCTTAATTTTTGTTTGGCAGTTTTGTGGGGAGGTGGGTGCCACTTTCAACGATGTCACTGGAGAGGCTGACCTCGATCGCCCTTTTTCCTTCCGTGCATTCGGGTCGCATGGTCCTATAGGAGCACCGGTGCAGAGTCCTATGGGAGCACCGGTACAGGGTCCTACAGCAGCAACGAGTCCAGTGGAGGGTCCTGTTGCAGCAGAAATGAGTCCGGTGGAGGGTCCTGCAGCCGCAAGTCCGATGGATGGTCCAGTTGCAGGAGCAGCGAATCCCGTTGAGGGTCCAGCCGCAGGAGCAGCGAGTCCCGTTGAGGGTCCCACCGCCATAGGGGCAGCGAGTCCCGTTGAGGGTCCCGCCGTCGCAGGTGAGGGTCCCGCTGCCATAGTTGGGGGTCCCGCCGTCGCATTTGGGGGTCCCGCTGCAGGAGCCGCTCCCATTGAGGGTCCTGCTCCAGTTGAGGGTCCCGCTCCAGTTGAGGGTCCCGCCGCAGGGGTCGCTCCAGTTGAGGGTCCCGCTGGAGGGACAGCTCCAGTGCAGAGTTCATGA

Coding sequence (CDS)

ATGGCAATGGCCAGAGGCTCTAAGCTTTTTCACATCCTTTTCTTAATTTTTGTTTGGCAGTTTTGTGGGGAGGTGGGTGCCACTTTCAACGATGTCACTGGAGAGGCTGACCTCGATCGCCCTTTTTCCTTCCGTGCATTCGGGTCGCATGGTCCTATAGGAGCACCGGTGCAGAGTCCTATGGGAGCACCGGTACAGGGTCCTACAGCAGCAACGAGTCCAGTGGAGGGTCCTGTTGCAGCAGAAATGAGTCCGGTGGAGGGTCCTGCAGCCGCAAGTCCGATGGATGGTCCAGTTGCAGGAGCAGCGAATCCCGTTGAGGGTCCAGCCGCAGGAGCAGCGAGTCCCGTTGAGGGTCCCACCGCCATAGGGGCAGCGAGTCCCGTTGAGGGTCCCGCCGTCGCAGGTGAGGGTCCCGCTGCCATAGTTGGGGGTCCCGCCGTCGCATTTGGGGGTCCCGCTGCAGGAGCCGCTCCCATTGAGGGTCCTGCTCCAGTTGAGGGTCCCGCTCCAGTTGAGGGTCCCGCCGCAGGGGTCGCTCCAGTTGAGGGTCCCGCTGGAGGGACAGCTCCAGTGCAGAGTTCATGA

Protein sequence

MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSHGPIGAPVQSPMGAPVQGPTAATSPVEGPVAAEMSPVEGPAAASPMDGPVAGAANPVEGPAAGAASPVEGPTAIGAASPVEGPAVAGEGPAAIVGGPAVAFGGPAAGAAPIEGPAPVEGPAPVEGPAAGVAPVEGPAGGTAPVQSS

Homology

[Close]

BLAST of Moc09g06830 vs. NCBI nr
Match: XP_022146267.1 (uncharacterized protein LOC111015518 [Momordica charantia])

HSP 1 Score: 94.0 bits (232), Expect = 1.6e-15
Identity = 48/70 (68.57%), Postives = 51/70 (72.86%), Query Frame = 0


Query: 1  MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEA--DLDRPFSFRAFGSHGPIGAPVQ 60
          MAM RGSK FH LFL+FVWQFCGEVGATFND+TG A   L  PFSFRAFG H   G   Q
Sbjct: 1  MAMGRGSKFFHTLFLVFVWQFCGEVGATFNDITGVAKTGLHEPFSFRAFGPH---GGDSQ 60

Query: 61 SPMGAPVQGP 69
          SP  AP+Q P
Sbjct: 61 SPTEAPMQSP 67

[Close]

BLAST of Moc09g06830 vs. NCBI nr
Match: XP_022975298.1 (uncharacterized protein LOC111474444 isoform X1 [Cucurbita maxima])

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-10
Identity = 44/96 (45.83%), Postives = 54/96 (56.25%), Query Frame = 0


Query: 1  MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSH---GPIGAPV 60
          M M  G KLFH +FL+ VWQ+C +VGATF D TG  +LD  FSFRAFGSH    PI AP+
Sbjct: 1  MVMGNGFKLFHTIFLVIVWQYCAKVGATFGDETGVINLDHQFSFRAFGSHDTQAPIVAPI 60

Query: 61 QS--------PMGAPVQGPTAATSPVEGPVAAEMSP 86
           S        P G+  Q P A T       +  ++P
Sbjct: 61 GSSTNVLVAAPFGSIAQTPEALTPKASSTESIALTP 96

[Close]

BLAST of Moc09g06830 vs. NCBI nr
Match: XP_022975300.1 (uncharacterized protein LOC111474444 isoform X2 [Cucurbita maxima])

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-10
Identity = 44/96 (45.83%), Postives = 54/96 (56.25%), Query Frame = 0


Query: 1  MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSH---GPIGAPV 60
          M M  G KLFH +FL+ VWQ+C +VGATF D TG  +LD  FSFRAFGSH    PI AP+
Sbjct: 1  MVMGNGFKLFHTIFLVIVWQYCAKVGATFGDETGVINLDHQFSFRAFGSHDTQAPIVAPI 60

Query: 61 QS--------PMGAPVQGPTAATSPVEGPVAAEMSP 86
           S        P G+  Q P A T       +  ++P
Sbjct: 61 GSSTNVLVAAPFGSIAQTPEALTPKASSTESIALTP 96

[Close]

BLAST of Moc09g06830 vs. NCBI nr
Match: XP_022975301.1 (uncharacterized protein LOC111474444 isoform X3 [Cucurbita maxima])

HSP 1 Score: 75.5 bits (184), Expect = 5.7e-10
Identity = 44/91 (48.35%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 1  MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSHGPIGAPVQSP 60
          M M  G KLFH +FL+ VWQ+C +VGATF D TG  +LD  FSFRAFGSH    AP+ +P
Sbjct: 1  MVMGNGFKLFHTIFLVIVWQYCAKVGATFGDETGVINLDHQFSFRAFGSH-DTQAPIVAP 60

Query: 61 MGAPVQGPTAATSPVEG-PVAAEMSPVEGPA 91
          +G+    P  A+  VE   +  E++ VE  A
Sbjct: 61 IGSIALTPEVAS--VESIALTPEVASVESTA 88

[Close]

BLAST of Moc09g06830 vs. NCBI nr
Match: XP_022925496.1 (uncharacterized protein LOC111432782 isoform X1 [Cucurbita moschata] >XP_022925497.1 uncharacterized protein LOC111432782 isoform X2 [Cucurbita moschata])

HSP 1 Score: 74.7 bits (182), Expect = 9.8e-10
Identity = 50/113 (44.25%), Postives = 61/113 (53.98%), Query Frame = 0


Query: 1   MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSHG---PIGAP- 60
           MAM +G KLFH LFL+  WQ+C +VGAT+ DVTG   LD  FSFRAFGSH    P  AP 
Sbjct: 1   MAMGKGFKLFHTLFLVVAWQYCVKVGATYGDVTGVVKLDHQFSFRAFGSHDTQTPAIAPI 60

Query: 61  -------VQSPMGAPVQGPTAATSPVEGPVAAEMSP---VEGPAAASPMDGPV 100
                  V SP G+  Q P A T  V    +  ++P     G  A +P   P+
Sbjct: 61  ASSTEVLVASPFGSIAQTPEALTPEVASVGSTALTPEVASVGSTARTPTITPI 113

[Close]

BLAST of Moc09g06830 vs. ExPASy Swiss-Prot
Match: P17437 (Skin secretory protein xP2 OS=Xenopus laevis OX=8355 GN=p2 PE=2 SV=2)

HSP 1 Score: 48.1 bits (113), Expect = 1.3e-04
Identity = 71/190 (37.37%), Postives = 81/190 (42.63%), Query Frame = 0


Query: 8   KLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSHGPIGAPVQSPMGAPVQG 67
           KLF + FL+ +   C   G    D  GE       +        P  AP +    AP +G
Sbjct: 4   KLFCVHFLLLILSVCYIQG---QDAGGEPAPAEGVAPAPAEGGAPAPAPAEGEAPAPAEG 63

Query: 68  PTAATSPVEGPVAAEMSPVEGPAAASPMDGPVAGAANPVEGPAAGAASPVEGPTAIGAAS 127
              A +P EG   AE +P +G A   P   P  G A P   PA G A P   P   GA +
Sbjct: 64  GAPAPAPAEG---AEPAPADGGA---PAPAPAEGGA-PAPAPAEGGA-PAPAPAEGGAPA 123

Query: 128 PVEGPAVA-----GEGPAAIVGGPAVAFG-GPAAGAAPIEGPAPVEGPAPVEGPAAGVAP 187
           P EG A A     GE PA     PA A G  PA   A  E PAP EG AP   PA   AP
Sbjct: 124 PAEGGAPAPAPAEGEAPA-----PAPAEGEAPAPAPAEGEAPAPAEGEAPAPAPAEVEAP 177

Query: 188 VEGPAGGTAP 192
              PA G AP
Sbjct: 184 APAPAEGEAP 177

[Close]

BLAST of Moc09g06830 vs. ExPASy Swiss-Prot
Match: Q8N7U7 (Tetra-peptide repeat homeobox protein 1 OS=Homo sapiens OX=9606 GN=TPRX1 PE=1 SV=3)

HSP 1 Score: 45.8 bits (107), Expect = 6.4e-04
Identity = 50/150 (33.33%), Postives = 72/150 (48.00%), Query Frame = 0


Query: 52  PIGAPVQSPMGAPVQGPTAATSPVEGPVAAEMSPVEGPAA---ASPMDGPVAGA-ANPVE 111
           PI AP+  P+  PVQ P     P+ GP++   +P+ GP +   + P  GP+ G    P+ 
Sbjct: 130 PIPAPIPGPISGPVQIPGPFRGPIPGPISGP-APIPGPISGPFSGPNPGPIPGPNPGPIP 189

Query: 112 GPAAGAASPVEGPTAIGAASPVEGP---AVAGEGPAAIVGGPAVAFGGPAAG--AAPIEG 171
           GP +G   P+ GP ++    P+ GP    ++G  P  I G       GP  G    PI G
Sbjct: 190 GPISG---PIPGPISVPIPGPIPGPISGPISGPNPGPIPGPIPGPISGPNPGPIPGPISG 249

Query: 172 PAPVEGPAPVEGPAAGVAPVEGPAGGTAPV 193
           P P   P P+ GP +G  P+ GP    A +
Sbjct: 250 PNPGLIPGPIPGPISGPGPIIGPIPSPAQI 275

[Close]

BLAST of Moc09g06830 vs. ExPASy TrEMBL
Match: A0A6J1CZ48 (uncharacterized protein LOC111015518 OS=Momordica charantia OX=3673 GN=LOC111015518 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 7.5e-16
Identity = 48/70 (68.57%), Postives = 51/70 (72.86%), Query Frame = 0


Query: 1  MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEA--DLDRPFSFRAFGSHGPIGAPVQ 60
          MAM RGSK FH LFL+FVWQFCGEVGATFND+TG A   L  PFSFRAFG H   G   Q
Sbjct: 1  MAMGRGSKFFHTLFLVFVWQFCGEVGATFNDITGVAKTGLHEPFSFRAFGPH---GGDSQ 60

Query: 61 SPMGAPVQGP 69
          SP  AP+Q P
Sbjct: 61 SPTEAPMQSP 67

[Close]

BLAST of Moc09g06830 vs. ExPASy TrEMBL
Match: A0A6J1IGC2 (uncharacterized protein LOC111474444 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111474444 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 5.6e-11
Identity = 44/96 (45.83%), Postives = 54/96 (56.25%), Query Frame = 0


Query: 1  MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSH---GPIGAPV 60
          M M  G KLFH +FL+ VWQ+C +VGATF D TG  +LD  FSFRAFGSH    PI AP+
Sbjct: 1  MVMGNGFKLFHTIFLVIVWQYCAKVGATFGDETGVINLDHQFSFRAFGSHDTQAPIVAPI 60

Query: 61 QS--------PMGAPVQGPTAATSPVEGPVAAEMSP 86
           S        P G+  Q P A T       +  ++P
Sbjct: 61 GSSTNVLVAAPFGSIAQTPEALTPKASSTESIALTP 96

[Close]

BLAST of Moc09g06830 vs. ExPASy TrEMBL
Match: A0A6J1IIT3 (uncharacterized protein LOC111474444 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474444 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 5.6e-11
Identity = 44/96 (45.83%), Postives = 54/96 (56.25%), Query Frame = 0


Query: 1  MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSH---GPIGAPV 60
          M M  G KLFH +FL+ VWQ+C +VGATF D TG  +LD  FSFRAFGSH    PI AP+
Sbjct: 1  MVMGNGFKLFHTIFLVIVWQYCAKVGATFGDETGVINLDHQFSFRAFGSHDTQAPIVAPI 60

Query: 61 QS--------PMGAPVQGPTAATSPVEGPVAAEMSP 86
           S        P G+  Q P A T       +  ++P
Sbjct: 61 GSSTNVLVAAPFGSIAQTPEALTPKASSTESIALTP 96

[Close]

BLAST of Moc09g06830 vs. ExPASy TrEMBL
Match: A0A6J1IDS8 (uncharacterized protein LOC111474444 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111474444 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.8e-10
Identity = 44/91 (48.35%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 1  MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSHGPIGAPVQSP 60
          M M  G KLFH +FL+ VWQ+C +VGATF D TG  +LD  FSFRAFGSH    AP+ +P
Sbjct: 1  MVMGNGFKLFHTIFLVIVWQYCAKVGATFGDETGVINLDHQFSFRAFGSH-DTQAPIVAP 60

Query: 61 MGAPVQGPTAATSPVEG-PVAAEMSPVEGPA 91
          +G+    P  A+  VE   +  E++ VE  A
Sbjct: 61 IGSIALTPEVAS--VESIALTPEVASVESTA 88

[Close]

BLAST of Moc09g06830 vs. ExPASy TrEMBL
Match: A0A6J1ECD3 (uncharacterized protein LOC111432782 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432782 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 4.7e-10
Identity = 50/113 (44.25%), Postives = 61/113 (53.98%), Query Frame = 0


Query: 1   MAMARGSKLFHILFLIFVWQFCGEVGATFNDVTGEADLDRPFSFRAFGSHG---PIGAP- 60
           MAM +G KLFH LFL+  WQ+C +VGAT+ DVTG   LD  FSFRAFGSH    P  AP 
Sbjct: 1   MAMGKGFKLFHTLFLVVAWQYCVKVGATYGDVTGVVKLDHQFSFRAFGSHDTQTPAIAPI 60

Query: 61  -------VQSPMGAPVQGPTAATSPVEGPVAAEMSP---VEGPAAASPMDGPV 100
                  V SP G+  Q P A T  V    +  ++P     G  A +P   P+
Sbjct: 61  ASSTEVLVASPFGSIAQTPEALTPEVASVGSTALTPEVASVGSTARTPTITPI 113

The following BLAST results are available for this feature:

BLAST of Moc09g06830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146267.1	1.6e-15	68.57	uncharacterized protein LOC111015518 [Momordica charantia]	[more]
XP_022975298.1	1.2e-10	45.83	uncharacterized protein LOC111474444 isoform X1 [Cucurbita maxima]	[more]
XP_022975300.1	1.2e-10	45.83	uncharacterized protein LOC111474444 isoform X2 [Cucurbita maxima]	[more]
XP_022975301.1	5.7e-10	48.35	uncharacterized protein LOC111474444 isoform X3 [Cucurbita maxima]	[more]
XP_022925496.1	9.8e-10	44.25	uncharacterized protein LOC111432782 isoform X1 [Cucurbita moschata] >XP_0229254...	[more]

BLAST of Moc09g06830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P17437	1.3e-04	37.37	Skin secretory protein xP2 OS=Xenopus laevis OX=8355 GN=p2 PE=2 SV=2	[more]
Q8N7U7	6.4e-04	33.33	Tetra-peptide repeat homeobox protein 1 OS=Homo sapiens OX=9606 GN=TPRX1 PE=1 SV...	[more]

BLAST of Moc09g06830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZ48	7.5e-16	68.57	uncharacterized protein LOC111015518 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1IGC2	5.6e-11	45.83	uncharacterized protein LOC111474444 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IIT3	5.6e-11	45.83	uncharacterized protein LOC111474444 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IDS8	2.8e-10	48.35	uncharacterized protein LOC111474444 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1ECD3	4.7e-10	44.25	uncharacterized protein LOC111432782 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Moc09g06830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g06830.1	Moc09g06830.1	mRNA