Moc09g06770 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g06770
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionA-kinase anchor protein 5
Locationchr9: 5335960 .. 5337638 (+)
RNA-Seq ExpressionMoc09g06770
SyntenyMoc09g06770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTCCGCGTTTTGTTTATCTTGGTTGCTCTTGCCCCCATCTGGTATCAGGGATTTATGTCGCTTTTTGCCCTTTTGCTGGCCTCAGGAGTTGAAAATCCGAGTTTGTCGTTTGATATTCCCTCCTAGCCTCAGCTTTCTCCCTGCATTGTCCGTTGATTCTTCAGTCTCACTCTCAACTGGGCATTTTCCATTTGGGGGGTCTCTGACGAGGGGTACCTCGCTGGTCTCTCGTTGTTGTAGTTGTTGAAGTAGCTGAGTCATGCGTCGACACATGCTCTCTACCTTTTTTTCCAAGGCTGCGAACTGACTTTGATGTTGTCCAGGGACTGTTGTTGTAGGTACCTCAGGCGGCCCTTCTTGGCATTCCAAGTTTTGTCGACTCAATCCCGTCTCGCCCTCGAGTCCTCATATCTGGGGGTCATCCAAATCTAACTTCTTCTTTGCATGGCTGTCGTCGTCAGAGCATCATGGACTTCTTTCCAGCGTCATGCTATTCGACTGTACGACTTGTTTCGTCCCCACAGACGGTGCCAATTGTTGATGCGTAGAATATGCTCTCTCGGTTCCTTCCGTGGCTCGCACCAAACTCGACTATCAGGGAATCGAAAACCTGCAAAATCGAACACAACTAGACCGATGTGACTCTTGTCACACGGGATCCGATGCCTAAGTTAGCAAAGAGAGTAGTTGAGCAATGGAACTCAAGTGTAGAATTCAGCTTACGTTAGGGTTAGGGTACATGGCCTACTTATAGTCGCTCGAAAGTTATAGATCTTTATAAATGTGCCCTAATTCATTGCTGCAGGGCCCATGGTGCATGAAGATTAGAAGAGGGCGAGTGTCGGGCTTGGCCCAAGGTACGTCGGTTCGTTCGGTTCGTCTGGTAGTCTCTTTGATTCTCTTCTCATTGCTTTGTCATTTGTCCTTTGTATAACAGTAATGTACAATATTTCTATTGATATGAGATTCGTTTGAGTGATATAGAAAGTAAAACTACATGGATTTGTTTGTGTAATATCGAAAGTAAAACTACATAGATTTAAATTAAAAGGGTAGATTATTGTATACTTTTGAAAATATTAATGGTATTCCAAGTCATCTTTGGACTTAACTACATAGTTGGATTTTTATTCGATCCAAGGGGAAGATTGTTAAGGGTACTGGGTTGATGCAGGATTCTACCGAGCTTTGATCGAGGTTGGTCACATGGCAACTGGTTGAGCTAATGAGGTGCGAGCTCATACAAAGTAAGACCTGCAAAAAGGAAATAAACACTCCGACAATCAAGTCAAGGTCGTTTCTTGAGAAAATTTGCATACTTGGGTCAGAGGCATGAGTGTCTTTTTATAAGTCAAGTGAAAGGACAAGTCTATTATGACCCTTAAGACAAGGCAGTTGGACGGTTACAAATTGTCGAACCATAGGTCAGTAATGACTGATGTCGGCTATTCATCCTTTCATATGGATGAGCTTGGTAGCTTTGTAGTAGATGAGCTTAGTAGCTCAGTAGTAGATGAACTTAGTAGCTCAGCCATGGATGAGCTTAAAAGTTTGGCGGTGGATGAGCTTAGTAGCTTAGTAGTAGATGAACTTAGTAGCTCGGCCATGGATGAGCTTAGGAGCTTGACGATGGATGAGCTTGGGAGCTTGGCGATTGTTGAATCAAGAAATTGA

mRNA sequence

ATGGGCTCCGCGTTTTGTTTATCTTGGTTGCTCTTGCCCCCATCTGGTATCAGGGATTTATGTCGCTTTTTGCCCTTTTGCTGGCCTCAGGAGTTGAAAATCCGAGTTTGTCGTTTGATATTCCCTCCTAGCCTCAGCTTTCTCCCTGCATTGTCCGTTGATTCTTCAGTCTCACTCTCAACTGGGCATTTTCCATTTGGGGGGTCTCTGACGAGGGGTACCTCGCTGGTACCTCAGGCGGCCCTTCTTGGCATTCCAAGTTTTGTCGACTCAATCCCGTCTCGCCCTCGAGTCCTCATATCTGGGGGTCATCCAAATCTAACTTCTTCTTTGCATGGCTGTCGTCGTCAGAGCATCATGGACTTCTTTCCAGCGTCATGCTATTCGACTGGCCCATGGTGCATGAAGATTAGAAGAGGGCGAGTGTCGGGCTTGGCCCAAGGTACGTCGGTTCGTTCGGTTCGTCTGTTGGACGGTTACAAATTGTCGAACCATAGGTCAGTAATGACTGATGTCGGCTATTCATCCTTTCATATGGATGAGCTTGGTAGCTTTGTAGTAGATGAGCTTAGTAGCTCAGTAGTAGATGAACTTAGTAGCTCAGCCATGGATGAGCTTAAAAGTTTGGCGGTGGATGAGCTTAGTAGCTTAGTAGTAGATGAACTTAGTAGCTCGGCCATGGATGAGCTTAGGAGCTTGACGATGGATGAGCTTGGGAGCTTGGCGATTGTTGAATCAAGAAATTGA

Coding sequence (CDS)

ATGGGCTCCGCGTTTTGTTTATCTTGGTTGCTCTTGCCCCCATCTGGTATCAGGGATTTATGTCGCTTTTTGCCCTTTTGCTGGCCTCAGGAGTTGAAAATCCGAGTTTGTCGTTTGATATTCCCTCCTAGCCTCAGCTTTCTCCCTGCATTGTCCGTTGATTCTTCAGTCTCACTCTCAACTGGGCATTTTCCATTTGGGGGGTCTCTGACGAGGGGTACCTCGCTGGTACCTCAGGCGGCCCTTCTTGGCATTCCAAGTTTTGTCGACTCAATCCCGTCTCGCCCTCGAGTCCTCATATCTGGGGGTCATCCAAATCTAACTTCTTCTTTGCATGGCTGTCGTCGTCAGAGCATCATGGACTTCTTTCCAGCGTCATGCTATTCGACTGGCCCATGGTGCATGAAGATTAGAAGAGGGCGAGTGTCGGGCTTGGCCCAAGGTACGTCGGTTCGTTCGGTTCGTCTGTTGGACGGTTACAAATTGTCGAACCATAGGTCAGTAATGACTGATGTCGGCTATTCATCCTTTCATATGGATGAGCTTGGTAGCTTTGTAGTAGATGAGCTTAGTAGCTCAGTAGTAGATGAACTTAGTAGCTCAGCCATGGATGAGCTTAAAAGTTTGGCGGTGGATGAGCTTAGTAGCTTAGTAGTAGATGAACTTAGTAGCTCGGCCATGGATGAGCTTAGGAGCTTGACGATGGATGAGCTTGGGAGCTTGGCGATTGTTGAATCAAGAAATTGA

Protein sequence

MGSAFCLSWLLLPPSGIRDLCRFLPFCWPQELKIRVCRLIFPPSLSFLPALSVDSSVSLSTGHFPFGGSLTRGTSLVPQAALLGIPSFVDSIPSRPRVLISGGHPNLTSSLHGCRRQSIMDFFPASCYSTGPWCMKIRRGRVSGLAQGTSVRSVRLLDGYKLSNHRSVMTDVGYSSFHMDELGSFVVDELSSSVVDELSSSAMDELKSLAVDELSSLVVDELSSSAMDELRSLTMDELGSLAIVESRN
Homology
[Close]
BLAST of Moc09g06770 vs. NCBI nr
Match: KPJ00514.1 (A-kinase anchor protein 5 [Papilio xuthus])

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-04
Identity = 32/98 (32.65%), Postives = 55/98 (56.12%), Query Frame = 0 

Query: 146 AQGTSVRSVRLLDGYKLSNHRSVMTDVGYSSFHMDELGSFVVDELSSSVVDELSSSAMDE 205
           +QGTS  S+        SN  S  +   Y    +D+L    VD+L+   VD+L+   +D+
Sbjct: 221 SQGTSSSSITSASSSSNSNSNSYASTQYYEEEAVDQLNQEAVDQLNQVAVDQLNQEVVDQ 280

Query: 206 LKSLAVDELSSLVVDELSSSAMDELRSLTMDELGSLAI 244
           L   AVD+L+ + VD+L+ +A+D+L    +D+L  +A+
Sbjct: 281 LNQAAVDQLNQVAVDQLNQAAVDQLNQAAVDQLNQVAV 318

[Close]
BLAST of Moc09g06770 vs. ExPASy TrEMBL
Match: A0A7D9M9I1 (Uncharacterized protein OS=Paramuricea clavata OX=317549 GN=PACLA_6A047768 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.5e-05
Identity = 32/79 (40.51%), Postives = 56/79 (70.89%), Query Frame = 0 

Query: 167 SVMTDVGYSSFHMDELGSFVVDELSSSVVDELSSSAMDELKSLAVDELSSLVVDELSSSA 226
           +VM DVG  S  MD++GS VVD++ S+ VD + S+ +D++ S AVD++   V+D++ S+ 
Sbjct: 199 TVMDDVG--STVMDDVGSTVVDDVGSTAVDHVGSTVVDDVGSTAVDDVGPTVMDDVGSTV 258

Query: 227 MDELRSLTMDELGSLAIVE 246
           MD++ S  +D++GS  +V+
Sbjct: 259 MDDVGSTVVDDVGSTVMVD 275

[Close]
BLAST of Moc09g06770 vs. ExPASy TrEMBL
Match: A0A194Q580 (A-kinase anchor protein 5 OS=Papilio xuthus OX=66420 GN=RR46_07104 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.6e-05
Identity = 32/98 (32.65%), Postives = 55/98 (56.12%), Query Frame = 0 

Query: 146 AQGTSVRSVRLLDGYKLSNHRSVMTDVGYSSFHMDELGSFVVDELSSSVVDELSSSAMDE 205
           +QGTS  S+        SN  S  +   Y    +D+L    VD+L+   VD+L+   +D+
Sbjct: 221 SQGTSSSSITSASSSSNSNSNSYASTQYYEEEAVDQLNQEAVDQLNQVAVDQLNQEVVDQ 280

Query: 206 LKSLAVDELSSLVVDELSSSAMDELRSLTMDELGSLAI 244
           L   AVD+L+ + VD+L+ +A+D+L    +D+L  +A+
Sbjct: 281 LNQAAVDQLNQVAVDQLNQAAVDQLNQAAVDQLNQVAV 318

[Close]
BLAST of Moc09g06770 vs. ExPASy TrEMBL
Match: A0A7D9M9N8 (Uncharacterized protein (Fragment) OS=Paramuricea clavata OX=317549 GN=PACLA_6A010706 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 8.4e-04
Identity = 29/72 (40.28%), Postives = 50/72 (69.44%), Query Frame = 0 

Query: 172 VGYSSFHMDELGSFVVDELSSSVVDELSSSAMDELKSLAVDELSSLVVDELSSSAMDELR 231
           VG  S  +D++GS VVD++ SSVVD++ SS +D++ S  VD + S VVD++ SS +D++ 
Sbjct: 2   VGVGSSVVDDVGSSVVDDVGSSVVDDVDSSVVDDVGSSVVDNVGSSVVDDVGSSVVDDVG 61

Query: 232 SLTMDELGSLAI 244
              ++++GS  +
Sbjct: 62  PTVVNDVGSSVV 73

The following BLAST results are available for this feature:
BLAST of Moc09g06770 vs. NCBI nr
Match NameE-valueIdentityDescription
KPJ00514.11.6e-0432.65A-kinase anchor protein 5 [Papilio xuthus][more]
BLAST of Moc09g06770 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc09g06770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7D9M9I14.5e-0540.51Uncharacterized protein OS=Paramuricea clavata OX=317549 GN=PACLA_6A047768 PE=4 ... [more]
A0A194Q5807.6e-0532.65A-kinase anchor protein 5 OS=Papilio xuthus OX=66420 GN=RR46_07104 PE=4 SV=1[more]
A0A7D9M9N88.4e-0440.28Uncharacterized protein (Fragment) OS=Paramuricea clavata OX=317549 GN=PACLA_6A0... [more]
BLAST of Moc09g06770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g06770.1Moc09g06770.1mRNA