Moc09g05180 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g05180
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	thylakoid lumenal 19 kDa protein, chloroplastic
Location	chr9: 3978931 .. 3979762 (+)
RNA-Seq Expression	Moc09g05180
Synteny	Moc09g05180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACAGCAATCTCCCCCTTGGCGGTCTTCTCCGCCGCCGCCGCATCCTCCACCACAACCGCTCAAAAACCGCCGCAAACTCCGCCACTATCTAGGCTCCATCTACCTACTCTCCAATCTAAGCCCCTACTCCCCGCATTAGCCGCCCACGCCTCCGCCATCGCCGTAGCCGCGATCCTGAGCACTGCTTCGCCGTCACTGGCCGACACCGGCGCCGCTTTCAACGTCTACTACGGCACCGCTGCCAGCGCTGCCAACTACGGCGGCTACGGCGGCAACGCCAGCAAGAAAGACACGGCGGAGTACGTGTACGACGTGCCGGACGGCTGGAAGGAGCGATTGGTATCGAAGGTCGAAAAAGGTACTCCAGAATCGTAATCGAAATTCCCTAATCGATGAGCCCTATTTCATTCAATCGTTCTGGAATCGATTAATCCTTCTTAATGGCGCAGGAACTAATGGAACGGACAGCGAATTTTACAATCCGAAGAAGCGATCGGAGAAAGAATACCTAACTTTCCTGGCCGGAATCCGGCAATTGGCGCCGAAGGACGTGATTCTGAACAACCTAGCGCTATCGGACGTGAATTTGCAGGATCAGATCGCGAGCGCCGATAGTGTCTCGTCGGAGGAGAAGAAGGACGAGAACGGACAAGTTTATTATGTGTACGAGATCGACGGCTCCGGAGCTCACAGTTTGATATCGGTGACTTGTGCGAAGAACAAGCTGTACGCGCATTTCGTTAACGCGCCGACGCCGGAGTGGAACCGGGACCGGGAGTTGCTCCGGCATGTGCACGAGTCGTTCAAGACGATCGGATCGTATTAG

mRNA sequence

ATGGCCACAGCAATCTCCCCCTTGGCGGTCTTCTCCGCCGCCGCCGCATCCTCCACCACAACCGCTCAAAAACCGCCGCAAACTCCGCCACTATCTAGGCTCCATCTACCTACTCTCCAATCTAAGCCCCTACTCCCCGCATTAGCCGCCCACGCCTCCGCCATCGCCGTAGCCGCGATCCTGAGCACTGCTTCGCCGTCACTGGCCGACACCGGCGCCGCTTTCAACGTCTACTACGGCACCGCTGCCAGCGCTGCCAACTACGGCGGCTACGGCGGCAACGCCAGCAAGAAAGACACGGCGGAGTACGTGTACGACGTGCCGGACGGCTGGAAGGAGCGATTGGTATCGAAGGTCGAAAAAGGAACTAATGGAACGGACAGCGAATTTTACAATCCGAAGAAGCGATCGGAGAAAGAATACCTAACTTTCCTGGCCGGAATCCGGCAATTGGCGCCGAAGGACGTGATTCTGAACAACCTAGCGCTATCGGACGTGAATTTGCAGGATCAGATCGCGAGCGCCGATAGTGTCTCGTCGGAGGAGAAGAAGGACGAGAACGGACAAGTTTATTATGTGTACGAGATCGACGGCTCCGGAGCTCACAGTTTGATATCGGTGACTTGTGCGAAGAACAAGCTGTACGCGCATTTCGTTAACGCGCCGACGCCGGAGTGGAACCGGGACCGGGAGTTGCTCCGGCATGTGCACGAGTCGTTCAAGACGATCGGATCGTATTAG

Coding sequence (CDS)

ATGGCCACAGCAATCTCCCCCTTGGCGGTCTTCTCCGCCGCCGCCGCATCCTCCACCACAACCGCTCAAAAACCGCCGCAAACTCCGCCACTATCTAGGCTCCATCTACCTACTCTCCAATCTAAGCCCCTACTCCCCGCATTAGCCGCCCACGCCTCCGCCATCGCCGTAGCCGCGATCCTGAGCACTGCTTCGCCGTCACTGGCCGACACCGGCGCCGCTTTCAACGTCTACTACGGCACCGCTGCCAGCGCTGCCAACTACGGCGGCTACGGCGGCAACGCCAGCAAGAAAGACACGGCGGAGTACGTGTACGACGTGCCGGACGGCTGGAAGGAGCGATTGGTATCGAAGGTCGAAAAAGGAACTAATGGAACGGACAGCGAATTTTACAATCCGAAGAAGCGATCGGAGAAAGAATACCTAACTTTCCTGGCCGGAATCCGGCAATTGGCGCCGAAGGACGTGATTCTGAACAACCTAGCGCTATCGGACGTGAATTTGCAGGATCAGATCGCGAGCGCCGATAGTGTCTCGTCGGAGGAGAAGAAGGACGAGAACGGACAAGTTTATTATGTGTACGAGATCGACGGCTCCGGAGCTCACAGTTTGATATCGGTGACTTGTGCGAAGAACAAGCTGTACGCGCATTTCGTTAACGCGCCGACGCCGGAGTGGAACCGGGACCGGGAGTTGCTCCGGCATGTGCACGAGTCGTTCAAGACGATCGGATCGTATTAG

Protein sequence

MATAISPLAVFSAAAASSTTTAQKPPQTPPLSRLHLPTLQSKPLLPALAAHASAIAVAAILSTASPSLADTGAAFNVYYGTAASAANYGGYGGNASKKDTAEYVYDVPDGWKERLVSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASADSVSSEEKKDENGQVYYVYEIDGSGAHSLISVTCAKNKLYAHFVNAPTPEWNRDRELLRHVHESFKTIGSY

Homology

[Close]

BLAST of Moc09g05180 vs. NCBI nr
Match: XP_022146111.1 (thylakoid lumenal 19 kDa protein, chloroplastic [Momordica charantia])

HSP 1 Score: 468.4 bits (1204), Expect = 3.8e-128
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MATAISPLAVFSAAAASSTTTAQKPPQTPPLSRLHLPTLQSKPLLPALAAHASAIAVAAI 60
           MATAISPLAVFSAAAASSTTTAQKPPQTPPLSRLHLPTLQSKPLLPALAAHASAIAVAAI
Sbjct: 1   MATAISPLAVFSAAAASSTTTAQKPPQTPPLSRLHLPTLQSKPLLPALAAHASAIAVAAI 60

Query: 61  LSTASPSLADTGAAFNVYYGTAASAANYGGYGGNASKKDTAEYVYDVPDGWKERLVSKVE 120
           LSTASPSLADTGAAFNVYYGTAASAANYGGYGGNASKKDTAEYVYDVPDGWKERLVSKVE
Sbjct: 61  LSTASPSLADTGAAFNVYYGTAASAANYGGYGGNASKKDTAEYVYDVPDGWKERLVSKVE 120

Query: 121 KGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASADSVSS 180
           KGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASADSVSS
Sbjct: 121 KGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASADSVSS 180

Query: 181 EEKKDENGQVYYVYEIDGSGAHSLISVTCAKNKLYAHFVNAPTPEWNRDRELLRHVHESF 240
           EEKKDENGQVYYVYEIDGSGAHSLISVTCAKNKLYAHFVNAPTPEWNRDRELLRHVHESF
Sbjct: 181 EEKKDENGQVYYVYEIDGSGAHSLISVTCAKNKLYAHFVNAPTPEWNRDRELLRHVHESF 240

Query: 241 KTIGSY 247
           KTIGSY
Sbjct: 241 KTIGSY 246

[Close]

BLAST of Moc09g05180 vs. NCBI nr
Match: XP_038896859.1 (thylakoid lumenal 19 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 399.1 bits (1024), Expect = 2.9e-107
Identity = 209/250 (83.60%), Postives = 226/250 (90.40%), Query Frame = 0


Query: 1   MATAISPLAVFSAAAASSTTTAQKPPQTPPLSRLHLPTLQSKPLLPA----LAAHASAIA 60
           MATAI+PLA FSAAAAS+ TTA KPPQTPPL +  +P LQSKP L      ++  A+ IA
Sbjct: 1   MATAITPLAFFSAAAASTGTTAPKPPQTPPLPKPQIPILQSKPPLSTSTAPISIAATTIA 60

Query: 61  VAAILSTASPSLADTGAAFNVYYGTAASAANYGGYGGNASKKDTAEYVYDVPDGWKERLV 120
           VAAILST  PSLADTGAAFNVYYGTAASAANYGG GGNASKKDTAEY+YDVP+GWKERLV
Sbjct: 61  VAAILSTTPPSLADTGAAFNVYYGTAASAANYGGLGGNASKKDTAEYIYDVPEGWKERLV 120

Query: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASAD 180
           SKVEKGTNGTDSEFYNPKKR+EKEYLTFLAGIRQL PKDVILNNLALSDVNLQDQIASA+
Sbjct: 121 SKVEKGTNGTDSEFYNPKKRTEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180

Query: 181 SVSSEEKKDENGQVYYVYEIDGSGAHSLISVTCAKNKLYAHFVNAPTPEWNRDRELLRHV 240
           S  +EEKKDENGQ+YYVYEIDG+G HSLISVTCAKNKLYAHFVNAPTPEWNRD+++LRHV
Sbjct: 181 SFLAEEKKDENGQIYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240

Query: 241 HESFKTIGSY 247
           HESFKTIGSY
Sbjct: 241 HESFKTIGSY 250

[Close]

BLAST of Moc09g05180 vs. NCBI nr
Match: XP_023547955.1 (thylakoid lumenal 19 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 390.6 bits (1002), Expect = 1.0e-104
Identity = 206/247 (83.40%), Postives = 222/247 (89.88%), Query Frame = 0


Query: 1   MATAISPLAVFSAAAASSTTTAQKPPQTPPLSRLH-LPTLQSKPLLPALAAHASAIAVAA 60
           MA AISPLA FSAAAAS+ TTA K PQ PP  +   +P LQSKP L +L A  SAIA+AA
Sbjct: 1   MAAAISPLAFFSAAAASTGTTAPKLPQIPPPQKPQIIPILQSKPSLSSLTAAGSAIAIAA 60

Query: 61  ILSTASPSLADTGAAFNVYYGTAASAANYGGYGGNASKKDTAEYVYDVPDGWKERLVSKV 120
           I+ST+ PSLAD G AFNVYYGTAASAANYGG GGNA+KKD+AEYVYDVPDGWKERLVSKV
Sbjct: 61  IVSTSPPSLADAGPAFNVYYGTAASAANYGGLGGNANKKDSAEYVYDVPDGWKERLVSKV 120

Query: 121 EKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASADSVS 180
           EKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQL PKDVILNNLALSDVNLQDQIASA+S S
Sbjct: 121 EKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAESFS 180

Query: 181 SEEKKDENGQVYYVYEIDGSGAHSLISVTCAKNKLYAHFVNAPTPEWNRDRELLRHVHES 240
           +EEKKDENGQ+YY YEIDG+G HSLISVTCAKNKLYAHFVNAPTPEWNRD+++LRHVHES
Sbjct: 181 AEEKKDENGQIYYEYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHVHES 240

Query: 241 FKTIGSY 247
           FKTIGSY
Sbjct: 241 FKTIGSY 247

[Close]

BLAST of Moc09g05180 vs. NCBI nr
Match: XP_022991922.1 (thylakoid lumenal 19 kDa protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 387.9 bits (995), Expect = 6.6e-104
Identity = 205/246 (83.33%), Postives = 220/246 (89.43%), Query Frame = 0


Query: 1   MATAISPLAVFSAAAASSTTTAQKPPQTPPLSRLHLPTLQSKPLLPALAAHASAIAVAAI 60
           MATAISPLA FSAAAAS+ TTA K PQ P +    +P LQSKP L +L A  SAIA+AAI
Sbjct: 24  MATAISPLAFFSAAAASTGTTAPKLPQKPQI----IPILQSKPSLSSLTAACSAIAIAAI 83

Query: 61  LSTASPSLADTGAAFNVYYGTAASAANYGGYGGNASKKDTAEYVYDVPDGWKERLVSKVE 120
           +ST+ PSLAD G AFNVYYGTAASAANYGG GGNA KKD+AEYVYDVPDGWKERLVSKVE
Sbjct: 84  VSTSPPSLADAGPAFNVYYGTAASAANYGGLGGNADKKDSAEYVYDVPDGWKERLVSKVE 143

Query: 121 KGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASADSVSS 180
           KGTNGTDSEFYNPKKRSEKEYLTFLAGIRQL PKDVILNNLALSDVNLQDQIASA+S S+
Sbjct: 144 KGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAESFSA 203

Query: 181 EEKKDENGQVYYVYEIDGSGAHSLISVTCAKNKLYAHFVNAPTPEWNRDRELLRHVHESF 240
           EEKKDENGQ+YY YEID +G HSLISVTCAKNKLYAHFVNAPTPEWNRD+++LRHVHESF
Sbjct: 204 EEKKDENGQIYYEYEIDSAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHVHESF 263

Query: 241 KTIGSY 247
           KTIGSY
Sbjct: 264 KTIGSY 265

[Close]

BLAST of Moc09g05180 vs. NCBI nr
Match: XP_022959905.1 (thylakoid lumenal 19 kDa protein, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 386.7 bits (992), Expect = 1.5e-103
Identity = 203/249 (81.53%), Postives = 223/249 (89.56%), Query Frame = 0


Query: 1   MATAISPLAVFSAAAASST-TTAQKPPQTPPLSRLHLPTLQSKPL--LPALAAHASAIAV 60
           MATAISPLA FSA AA++T     KP QTPPL +  +P LQS P   L +L+A  SAIAV
Sbjct: 1   MATAISPLAFFSAGAAATTGAIVPKPSQTPPLPKPLIPVLQSNPSGPLSSLSAPISAIAV 60

Query: 61  AAILSTASPSLADTGAAFNVYYGTAASAANYGGYGGNASKKDTAEYVYDVPDGWKERLVS 120
           AAILST  PSLAD G AFNVYYGTAASAANYGG+GGNASKKD+AEY+YDVP+GWKERLVS
Sbjct: 61  AAILSTTPPSLADAGGAFNVYYGTAASAANYGGFGGNASKKDSAEYIYDVPEGWKERLVS 120

Query: 121 KVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASADS 180
           KVEKGTNGTDSEFYNPKKR EKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASA+ 
Sbjct: 121 KVEKGTNGTDSEFYNPKKRKEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASAEG 180

Query: 181 VSSEEKKDENGQVYYVYEIDGSGAHSLISVTCAKNKLYAHFVNAPTPEWNRDRELLRHVH 240
           +S+EEKKDENGQ+YYVYEIDG+G HSLISVTCAKNKLYAHFVNAPTPEW+RD+++LRHVH
Sbjct: 181 ISAEEKKDENGQIYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWDRDQDMLRHVH 240

Query: 241 ESFKTIGSY 247
           ESFKT+GSY
Sbjct: 241 ESFKTVGSY 249

[Close]

BLAST of Moc09g05180 vs. ExPASy Swiss-Prot
Match: P82658 (Thylakoid lumenal 19 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g63540 PE=1 SV=2)

HSP 1 Score: 286.6 bits (732), Expect = 2.7e-76
Identity = 143/211 (67.77%), Postives = 168/211 (79.62%), Query Frame = 0


Query: 43  PLLPALAAHASAIAVAAILSTAS--------PSLADTGAAFNVYYGTAASAANYGGYGGN 102
           P++P   A     ++AA L+  S        P+  +    + +YYGTAASAANYGGYGGN
Sbjct: 18  PIVPKAIASRLGTSLAAALAATSVLTMVPVLPAAGEGNQTYKIYYGTAASAANYGGYGGN 77

Query: 103 ASKKDTAEYVYDVPDGWKERLVSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLAPK 162
           + +K +AEYVYDVP+GWKERLVSKVEKGTNGTDSEFYNPKK++EKEYLTFLAG RQLAP+
Sbjct: 78  SDRKTSAEYVYDVPEGWKERLVSKVEKGTNGTDSEFYNPKKKTEKEYLTFLAGFRQLAPR 137

Query: 163 DVILNNLALSDVNLQDQIASADSVSSEEKKDENGQVYYVYEIDGSGAHSLISVTCAKNKL 222
           DVILNNLALSDV LQD IA AD V SEE+KDE GQVYY+YEIDG G HSLI+VTC+KN+L
Sbjct: 138 DVILNNLALSDVELQDLIAGADKVVSEERKDETGQVYYLYEIDGVGKHSLITVTCSKNRL 197

Query: 223 YAHFVNAPTPEWNRDRELLRHVHESFKTIGS 246
           YAHFVNAP PEWNRD + L H+ +SFKT+ S
Sbjct: 198 YAHFVNAPAPEWNRDHDTLTHLRDSFKTVSS 228

[Close]

BLAST of Moc09g05180 vs. ExPASy TrEMBL
Match: A0A6J1CYC9 (thylakoid lumenal 19 kDa protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015403 PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 1.9e-128
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MATAISPLAVFSAAAASSTTTAQKPPQTPPLSRLHLPTLQSKPLLPALAAHASAIAVAAI 60
           MATAISPLAVFSAAAASSTTTAQKPPQTPPLSRLHLPTLQSKPLLPALAAHASAIAVAAI
Sbjct: 1   MATAISPLAVFSAAAASSTTTAQKPPQTPPLSRLHLPTLQSKPLLPALAAHASAIAVAAI 60

Query: 61  LSTASPSLADTGAAFNVYYGTAASAANYGGYGGNASKKDTAEYVYDVPDGWKERLVSKVE 120
           LSTASPSLADTGAAFNVYYGTAASAANYGGYGGNASKKDTAEYVYDVPDGWKERLVSKVE
Sbjct: 61  LSTASPSLADTGAAFNVYYGTAASAANYGGYGGNASKKDTAEYVYDVPDGWKERLVSKVE 120

Query: 121 KGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASADSVSS 180
           KGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASADSVSS
Sbjct: 121 KGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASADSVSS 180

Query: 181 EEKKDENGQVYYVYEIDGSGAHSLISVTCAKNKLYAHFVNAPTPEWNRDRELLRHVHESF 240
           EEKKDENGQVYYVYEIDGSGAHSLISVTCAKNKLYAHFVNAPTPEWNRDRELLRHVHESF
Sbjct: 181 EEKKDENGQVYYVYEIDGSGAHSLISVTCAKNKLYAHFVNAPTPEWNRDRELLRHVHESF 240

Query: 241 KTIGSY 247
           KTIGSY
Sbjct: 241 KTIGSY 246

[Close]

BLAST of Moc09g05180 vs. ExPASy TrEMBL
Match: A0A6J1JN94 (thylakoid lumenal 19 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111488417 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 3.2e-104
Identity = 205/246 (83.33%), Postives = 220/246 (89.43%), Query Frame = 0


Query: 1   MATAISPLAVFSAAAASSTTTAQKPPQTPPLSRLHLPTLQSKPLLPALAAHASAIAVAAI 60
           MATAISPLA FSAAAAS+ TTA K PQ P +    +P LQSKP L +L A  SAIA+AAI
Sbjct: 24  MATAISPLAFFSAAAASTGTTAPKLPQKPQI----IPILQSKPSLSSLTAACSAIAIAAI 83

Query: 61  LSTASPSLADTGAAFNVYYGTAASAANYGGYGGNASKKDTAEYVYDVPDGWKERLVSKVE 120
           +ST+ PSLAD G AFNVYYGTAASAANYGG GGNA KKD+AEYVYDVPDGWKERLVSKVE
Sbjct: 84  VSTSPPSLADAGPAFNVYYGTAASAANYGGLGGNADKKDSAEYVYDVPDGWKERLVSKVE 143

Query: 121 KGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASADSVSS 180
           KGTNGTDSEFYNPKKRSEKEYLTFLAGIRQL PKDVILNNLALSDVNLQDQIASA+S S+
Sbjct: 144 KGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAESFSA 203

Query: 181 EEKKDENGQVYYVYEIDGSGAHSLISVTCAKNKLYAHFVNAPTPEWNRDRELLRHVHESF 240
           EEKKDENGQ+YY YEID +G HSLISVTCAKNKLYAHFVNAPTPEWNRD+++LRHVHESF
Sbjct: 204 EEKKDENGQIYYEYEIDSAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHVHESF 263

Query: 241 KTIGSY 247
           KTIGSY
Sbjct: 264 KTIGSY 265

[Close]

BLAST of Moc09g05180 vs. ExPASy TrEMBL
Match: A0A6J1H7M1 (thylakoid lumenal 19 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111460820 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 7.1e-104
Identity = 203/249 (81.53%), Postives = 223/249 (89.56%), Query Frame = 0


Query: 1   MATAISPLAVFSAAAASST-TTAQKPPQTPPLSRLHLPTLQSKPL--LPALAAHASAIAV 60
           MATAISPLA FSA AA++T     KP QTPPL +  +P LQS P   L +L+A  SAIAV
Sbjct: 1   MATAISPLAFFSAGAAATTGAIVPKPSQTPPLPKPLIPVLQSNPSGPLSSLSAPISAIAV 60

Query: 61  AAILSTASPSLADTGAAFNVYYGTAASAANYGGYGGNASKKDTAEYVYDVPDGWKERLVS 120
           AAILST  PSLAD G AFNVYYGTAASAANYGG+GGNASKKD+AEY+YDVP+GWKERLVS
Sbjct: 61  AAILSTTPPSLADAGGAFNVYYGTAASAANYGGFGGNASKKDSAEYIYDVPEGWKERLVS 120

Query: 121 KVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASADS 180
           KVEKGTNGTDSEFYNPKKR EKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASA+ 
Sbjct: 121 KVEKGTNGTDSEFYNPKKRKEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASAEG 180

Query: 181 VSSEEKKDENGQVYYVYEIDGSGAHSLISVTCAKNKLYAHFVNAPTPEWNRDRELLRHVH 240
           +S+EEKKDENGQ+YYVYEIDG+G HSLISVTCAKNKLYAHFVNAPTPEW+RD+++LRHVH
Sbjct: 181 ISAEEKKDENGQIYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWDRDQDMLRHVH 240

Query: 241 ESFKTIGSY 247
           ESFKT+GSY
Sbjct: 241 ESFKTVGSY 249

[Close]

BLAST of Moc09g05180 vs. ExPASy TrEMBL
Match: A0A5D3CG07 (Thylakoid lumenal 19 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00930 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.5e-103
Identity = 203/250 (81.20%), Postives = 223/250 (89.20%), Query Frame = 0


Query: 1   MATAISPLAVFSAAAASSTTTAQKPPQTPPLSRLHLPTLQSKPLL----PALAAHASAIA 60
           MATAI+PLA  ++ AAS+ TTA K PQT PL +  +P LQSK  L      ++  A+AIA
Sbjct: 1   MATAIAPLAFLTSTAASTGTTAPKSPQTSPLPKPQIPILQSKSPLSISTAPISIAATAIA 60

Query: 61  VAAILSTASPSLADTGAAFNVYYGTAASAANYGGYGGNASKKDTAEYVYDVPDGWKERLV 120
           VAAIL+TA PSLADTGAAFNVYYGTAASAANYGG GGNA+KKDTAEYVYDVP+GWKERLV
Sbjct: 61  VAAILNTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYVYDVPEGWKERLV 120

Query: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASAD 180
           SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQL PKDVILNNLALSDVNLQDQIASA+
Sbjct: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180

Query: 181 SVSSEEKKDENGQVYYVYEIDGSGAHSLISVTCAKNKLYAHFVNAPTPEWNRDRELLRHV 240
           S  ++EKKDENGQVYYVYEIDG+G HSLISVTCAKNKLYAHFVNAPTPEWNRD+++LRHV
Sbjct: 181 SFLADEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240

Query: 241 HESFKTIGSY 247
           HESFKT+GSY
Sbjct: 241 HESFKTVGSY 250

[Close]

BLAST of Moc09g05180 vs. ExPASy TrEMBL
Match: A0A1S3CES2 (thylakoid lumenal 19 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499916 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.5e-103
Identity = 203/250 (81.20%), Postives = 223/250 (89.20%), Query Frame = 0


Query: 1   MATAISPLAVFSAAAASSTTTAQKPPQTPPLSRLHLPTLQSKPLL----PALAAHASAIA 60
           MATAI+PLA  ++ AAS+ TTA K PQT PL +  +P LQSK  L      ++  A+AIA
Sbjct: 1   MATAIAPLAFLTSTAASTGTTAPKSPQTSPLPKPQIPILQSKSPLSISTAPISIAATAIA 60

Query: 61  VAAILSTASPSLADTGAAFNVYYGTAASAANYGGYGGNASKKDTAEYVYDVPDGWKERLV 120
           VAAIL+TA PSLADTGAAFNVYYGTAASAANYGG GGNA+KKDTAEYVYDVP+GWKERLV
Sbjct: 61  VAAILNTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYVYDVPEGWKERLV 120

Query: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIASAD 180
           SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQL PKDVILNNLALSDVNLQDQIASA+
Sbjct: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180

Query: 181 SVSSEEKKDENGQVYYVYEIDGSGAHSLISVTCAKNKLYAHFVNAPTPEWNRDRELLRHV 240
           S  ++EKKDENGQVYYVYEIDG+G HSLISVTCAKNKLYAHFVNAPTPEWNRD+++LRHV
Sbjct: 181 SFLADEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240

Query: 241 HESFKTIGSY 247
           HESFKT+GSY
Sbjct: 241 HESFKTVGSY 250

[Close]

BLAST of Moc09g05180 vs. TAIR 10
Match: AT3G63540.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein )

HSP 1 Score: 235.0 bits (598), Expect = 6.6e-62
Identity = 111/140 (79.29%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 106 DVPDGWKERLVSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLAPKDVILNNLALSD 165
           +V +GWKERLVSKVEKGTNGTDSEFYNPKK++EKEYLTFLAG RQLAP+DVILNNLALSD
Sbjct: 3   EVEEGWKERLVSKVEKGTNGTDSEFYNPKKKTEKEYLTFLAGFRQLAPRDVILNNLALSD 62

Query: 166 VNLQDQIASADSVSSEEKKDENGQVYYVYEIDGSGAHSLISVTCAKNKLYAHFVNAPTPE 225
           V LQD IA AD V SEE+KDE GQVYY+YEIDG G HSLI+VTC+KNKLYAHFVNAP PE
Sbjct: 63  VELQDLIAGADKVVSEERKDETGQVYYLYEIDGVGKHSLITVTCSKNKLYAHFVNAPAPE 122

Query: 226 WNRDRELLRHVHESFKTIGS 246
           WNRD + L H+ +SFKT+ S
Sbjct: 123 WNRDHDTLTHLRDSFKTVSS 142

The following BLAST results are available for this feature:

BLAST of Moc09g05180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146111.1	3.8e-128	100.00	thylakoid lumenal 19 kDa protein, chloroplastic [Momordica charantia]	[more]
XP_038896859.1	2.9e-107	83.60	thylakoid lumenal 19 kDa protein, chloroplastic [Benincasa hispida]	[more]
XP_023547955.1	1.0e-104	83.40	thylakoid lumenal 19 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo...	[more]
XP_022991922.1	6.6e-104	83.33	thylakoid lumenal 19 kDa protein, chloroplastic-like [Cucurbita maxima]	[more]
XP_022959905.1	1.5e-103	81.53	thylakoid lumenal 19 kDa protein, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of Moc09g05180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82658	2.7e-76	67.77	Thylakoid lumenal 19 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Moc09g05180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CYC9	1.9e-128	100.00	thylakoid lumenal 19 kDa protein, chloroplastic OS=Momordica charantia OX=3673 G...	[more]
A0A6J1JN94	3.2e-104	83.33	thylakoid lumenal 19 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1H7M1	7.1e-104	81.53	thylakoid lumenal 19 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=36...	[more]
A0A5D3CG07	3.5e-103	81.20	Thylakoid lumenal 19 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CES2	3.5e-103	81.20	thylakoid lumenal 19 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Moc09g05180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63540.1	6.6e-62	79.29	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 100..241 e-value: 1.1E-9 score: 38.6
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 83..242 e-value: 6.7E-17 score: 63.9
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 1..243
None	No IPR available	PANTHER	PTHR31407:SF20	THYLAKOID LUMENAL 19 KDA PROTEIN, CHLOROPLASTIC	coord: 1..243
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 99..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g05180.1	Moc09g05180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding