Moc09g04600 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g04600
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr9: 3519389 .. 3520784 (+)
RNA-Seq Expression	Moc09g04600
Synteny	Moc09g04600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCTGAATTCTCAATGTTGTGTTTCACTGGAAATTTTCTTGATATGGGTTCTTGGCGGATTTTGGTTGTGTAATTTAAGTTGTTTTGATGGAATTCATTGGGAATTTGGGCTGGTTTTAGATCGGAGCTGTGTGCTTTCTCGCCTCCTATTGAAGGTGTTGATTGTAGTTTTAGGTATAATAGTTAATATACCTCGATCTGCCTTTGATTGTAAATTCGGAATTTGATCTTCTGAGGCCGTGCATCTCATGAGTTTCTTTTTGTAATTCATCTGTGGATTATACTCTTCCATGTGATATTGATGTTTATGGGAAAGCAAATGTTGTTCTTCTCTACAATGCATGGAAAGTAATTGCTTGATGAGCTATTTTTCTTTCTACAATACATGGAAAGTCGTGTGGTTTCCTTTCTTCCTCATTGAATATTTTTATGGCCTTAATGGTAGGCTTGAAATGTGCATTTTCTGGCTTAGTTCTACATGATGTATTAAAATGGATAAGGTTTTCCCTTATTAACCACAAATCTCGGGAGCTTTGGTTGCATCGTTTTAAACTCTGTTGATTATGGAAGAACTGAAAACTGTGCTAGGTTGGTCACCATTGCCAAACAAATATGACCCCTATCTATCATTGTAGAAGCATATGGTTTTCAGGCACCCAATCAATTAATTCCCTGAAGCCTGTCACATTTATCTTGCATCAGTTATAGTAGTTAAGAGCTATGAGTTGGGGAGTTTCTAGTGAATGAAATAATTGGGAGGGGCTTATAATGCGGTTGATAGTTTTACACTGTTAGAGGTATGAGAGAGAAATTATAAAATGTATTTCGAATATGTATCTTATTAGAGGGCGTATAGATTTTCTAATCCGCATCAAACTGTTATTAGGAGGTGGTATATCTTTCTAAAGAAGAAGAAGAAGAAAACTTGTATAATGTTTGGATTGTCTTGTTCTGGAATTAGATCAGTTACTCGTTCTCTTGATACTCAACTGCCCTGCTATAAACTTTTCTCTTGTTTGTGAAAACTTGAGAACTATGTGGCAAGTTAACCAATCCGTGCTATTAATTTCAGGCTGACTGAGGAGTGAGTAGGTTGGATCATGCAACATGGTTCTTGACAGTGTCCTGTCTTCTCCTCACAGGAGGTCCCCATCATTCCGAAAGCCCTTTCCTCCGAACGAGTTTGGTAGTTGGTCGACTCTCGTTCAGCGGCATCGCTTCCTCCTAACGGCACTCGTCCTCTTGACTTTTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCTTCTTGCTTTGGGATGACGGGGGTGCAAAAAGAACAGTGTCGATTGGAGCTCGCAAAGGCTTCCATGGCTAAAGGGAAACTGAAAATTCTATGA

mRNA sequence

ATGTTTCTGAATTCTCAATGTTGTGTTTCACTGGAAATTTTCTTGATATGGGTTCTTGGCGGATTTTGGTTGTGTAATTTAAGTTGTTTTGATGGAATTCATTGGGAATTTGGGCTGGTTTTAGATCGGAGCTGTGTGCTTTCTCGCCTCCTATTGAAGGTGTTGATTGTAGTTTTAGGTTTTCCCTTATTAACCACAAATCTCGGGAGCTTTGGTTGCATCGTTTTAAACTCTGTTGATTATGGAAGAACTGAAAACTGTGCTAGGAGGTCCCCATCATTCCGAAAGCCCTTTCCTCCGAACGAGTTTGGTAGTTGGTCGACTCTCGTTCAGCGGCATCGCTTCCTCCTAACGGCACTCGTCCTCTTGACTTTTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCTTCTTGCTTTGGGATGACGGGGGTGCAAAAAGAACAGTGTCGATTGGAGCTCGCAAAGGCTTCCATGGCTAAAGGGAAACTGAAAATTCTATGA

Coding sequence (CDS)

ATGTTTCTGAATTCTCAATGTTGTGTTTCACTGGAAATTTTCTTGATATGGGTTCTTGGCGGATTTTGGTTGTGTAATTTAAGTTGTTTTGATGGAATTCATTGGGAATTTGGGCTGGTTTTAGATCGGAGCTGTGTGCTTTCTCGCCTCCTATTGAAGGTGTTGATTGTAGTTTTAGGTTTTCCCTTATTAACCACAAATCTCGGGAGCTTTGGTTGCATCGTTTTAAACTCTGTTGATTATGGAAGAACTGAAAACTGTGCTAGGAGGTCCCCATCATTCCGAAAGCCCTTTCCTCCGAACGAGTTTGGTAGTTGGTCGACTCTCGTTCAGCGGCATCGCTTCCTCCTAACGGCACTCGTCCTCTTGACTTTTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCTTCTTGCTTTGGGATGACGGGGGTGCAAAAAGAACAGTGTCGATTGGAGCTCGCAAAGGCTTCCATGGCTAAAGGGAAACTGAAAATTCTATGA

Protein sequence

MFLNSQCCVSLEIFLIWVLGGFWLCNLSCFDGIHWEFGLVLDRSCVLSRLLLKVLIVVLGFPLLTTNLGSFGCIVLNSVDYGRTENCARRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL

Homology

[Close]

BLAST of Moc09g04600 vs. NCBI nr
Match: XP_022155001.1 (uncharacterized protein LOC111022141 [Momordica charantia])

HSP 1 Score: 164.9 bits (416), Expect = 6.3e-37
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 89  RRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTG 148
           RRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTG
Sbjct: 12  RRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTG 71

Query: 149 VQKEQCRLELAKASMAKGKLKIL 172
           VQKEQCRLELAKASMAKGKLKIL
Sbjct: 72  VQKEQCRLELAKASMAKGKLKIL 94

[Close]

BLAST of Moc09g04600 vs. NCBI nr
Match: KAG6593358.1 (hypothetical protein SDJN03_12834, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144.4 bits (363), Expect = 8.8e-31
Identity = 83/109 (76.15%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 63  LLTTNLGSFGCIVLNSVDYGRTENCARRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVL 122
           LLT  +GS   +VL+SV      +  RRSPSFRK FPPNE GSWSTLVQRHRFLLTALVL
Sbjct: 15  LLTEEVGSCN-MVLDSV----LSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVL 74

Query: 123 LTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL 172
           LTFLCTIYLYFAVTLG SSSC G+TG QK QC+LELAK SMAKGKLKIL
Sbjct: 75  LTFLCTIYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL 117

[Close]

BLAST of Moc09g04600 vs. NCBI nr
Match: XP_011659492.1 (uncharacterized protein LOC101216292 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 1.5e-30
Identity = 75/83 (90.36%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 89  RRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTG 148
           RRSPSFRK F PNE GSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFG+TG
Sbjct: 12  RRSPSFRKSF-PNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGLTG 71

Query: 149 VQKEQCRLELAKASMAKGKLKIL 172
            QK QC LELAK SMAKGKLKIL
Sbjct: 72  TQKAQCHLELAKTSMAKGKLKIL 93

[Close]

BLAST of Moc09g04600 vs. NCBI nr
Match: KAE8646426.1 (hypothetical protein Csa_016913 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 1.5e-30
Identity = 75/83 (90.36%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 89  RRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTG 148
           RRSPSFRK F PNE GSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFG+TG
Sbjct: 57  RRSPSFRKSF-PNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGLTG 116

Query: 149 VQKEQCRLELAKASMAKGKLKIL 172
            QK QC LELAK SMAKGKLKIL
Sbjct: 117 TQKAQCHLELAKTSMAKGKLKIL 138

[Close]

BLAST of Moc09g04600 vs. NCBI nr
Match: KAG7025704.1 (hypothetical protein SDJN02_12202, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 143.3 bits (360), Expect = 2.0e-30
Identity = 82/108 (75.93%), Postives = 88/108 (81.48%), Query Frame = 0


Query: 64  LTTNLGSFGCIVLNSVDYGRTENCARRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLL 123
           LT  +GS   +VL+SV      +  RRSPSFRK FPPNE GSWSTLVQRHRFLLTALVLL
Sbjct: 11  LTEEVGSCN-MVLDSV----LSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLL 70

Query: 124 TFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL 172
           TFLCTIYLYFAVTLG SSSC G+TG QK QC+LELAK SMAKGKLKIL
Sbjct: 71  TFLCTIYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL 112

[Close]

BLAST of Moc09g04600 vs. ExPASy TrEMBL
Match: A0A6J1DQE0 (uncharacterized protein LOC111022141 OS=Momordica charantia OX=3673 GN=LOC111022141 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 3.1e-37
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 89  RRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTG 148
           RRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTG
Sbjct: 12  RRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTG 71

Query: 149 VQKEQCRLELAKASMAKGKLKIL 172
           VQKEQCRLELAKASMAKGKLKIL
Sbjct: 72  VQKEQCRLELAKASMAKGKLKIL 94

[Close]

BLAST of Moc09g04600 vs. ExPASy TrEMBL
Match: A0A0A0K6S1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G431400 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 7.3e-31
Identity = 75/83 (90.36%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 89  RRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTG 148
           RRSPSFRK F PNE GSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFG+TG
Sbjct: 38  RRSPSFRKSF-PNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGLTG 97

Query: 149 VQKEQCRLELAKASMAKGKLKIL 172
            QK QC LELAK SMAKGKLKIL
Sbjct: 98  TQKAQCHLELAKTSMAKGKLKIL 119

[Close]

BLAST of Moc09g04600 vs. ExPASy TrEMBL
Match: A0A5D3CG60 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001550 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30
Identity = 81/108 (75.00%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 64  LTTNLGSFGCIVLNSVDYGRTENCARRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLL 123
           LT  +GS   +VL+SV      +  RRSPSFRK F PNE GSWSTL+QRHRFLLTALVLL
Sbjct: 18  LTEEIGSCN-MVLDSV----LSSPHRRSPSFRKSF-PNELGSWSTLMQRHRFLLTALVLL 77

Query: 124 TFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL 172
           TFLCTIYLYFAVTLGSSSSCFG+TG QK QC+LELAK S+AKGKLKIL
Sbjct: 78  TFLCTIYLYFAVTLGSSSSCFGLTGTQKAQCQLELAKTSIAKGKLKIL 119

[Close]

BLAST of Moc09g04600 vs. ExPASy TrEMBL
Match: A0A6J1H8Z6 (uncharacterized protein LOC111460722 OS=Cucurbita moschata OX=3662 GN=LOC111460722 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.1e-30
Identity = 74/83 (89.16%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 89  RRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTG 148
           RRSPSFRK FPPNE GSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG SSSC G+TG
Sbjct: 12  RRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG-SSSCSGLTG 71

Query: 149 VQKEQCRLELAKASMAKGKLKIL 172
            QK QC+LELAK SMAKGKLKIL
Sbjct: 72  AQKAQCQLELAKTSMAKGKLKIL 93

[Close]

BLAST of Moc09g04600 vs. ExPASy TrEMBL
Match: A0A6J1KRB5 (uncharacterized protein LOC111497967 OS=Cucurbita maxima OX=3661 GN=LOC111497967 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.8e-30
Identity = 73/83 (87.95%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 89  RRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTG 148
           RRSPSFRK FPPNE GSWSTL+QRHRFLLTALVLLTFLCTIYLYFAVTLG SSSC G+TG
Sbjct: 12  RRSPSFRKAFPPNELGSWSTLIQRHRFLLTALVLLTFLCTIYLYFAVTLG-SSSCSGLTG 71

Query: 149 VQKEQCRLELAKASMAKGKLKIL 172
            QK QC+LELAK SMAKGKLKIL
Sbjct: 72  AQKAQCQLELAKTSMAKGKLKIL 93

[Close]

BLAST of Moc09g04600 vs. TAIR 10
Match: AT1G16170.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79660.1); Has 55 Blast hits to 55 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-19
Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = 0


Query: 82  GRTENCARRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGS-S 141
           G   + +RR    +K +  +E GSWSTL+QRH++LLTAL LL FLCT+YLYFAVTLG+  
Sbjct: 5   GLVSSPSRRQQCLKKQW--DELGSWSTLIQRHQYLLTALALLAFLCTVYLYFAVTLGARH 64

Query: 142 SSCFGMTGVQKEQCRLELAKASMAKGKLK 170
           SSC+G+TG  K  C+L+L +A ++KGKLK
Sbjct: 65  SSCYGLTGKDKAMCQLQLVQA-LSKGKLK 90

[Close]

BLAST of Moc09g04600 vs. TAIR 10
Match: AT1G79660.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 83.2 bits (204), Expect = 2.2e-16
Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 0


Query: 89  RRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSS-SCFGMT 148
           RR  + +K +  ++ GS ST+VQRHRFLLTA++LL FLCTIY+YFAVTLG+    C GMT
Sbjct: 12  RRPHALKKQW--DDLGSCSTVVQRHRFLLTAMLLLAFLCTIYIYFAVTLGARHLLCSGMT 71

Query: 149 GVQKEQCRLELAKASMAKGKLK 170
           G  K  C++E  +AS + GKLK
Sbjct: 72  GKDKAMCQMEHIQASFSNGKLK 91

The following BLAST results are available for this feature:

BLAST of Moc09g04600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155001.1	6.3e-37	100.00	uncharacterized protein LOC111022141 [Momordica charantia]	[more]
KAG6593358.1	8.8e-31	76.15	hypothetical protein SDJN03_12834, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_011659492.1	1.5e-30	90.36	uncharacterized protein LOC101216292 [Cucumis sativus]	[more]
KAE8646426.1	1.5e-30	90.36	hypothetical protein Csa_016913 [Cucumis sativus]	[more]
KAG7025704.1	2.0e-30	75.93	hypothetical protein SDJN02_12202, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Moc09g04600 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc09g04600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQE0	3.1e-37	100.00	uncharacterized protein LOC111022141 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A0A0K6S1	7.3e-31	90.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G431400 PE=4 SV=1	[more]
A0A5D3CG60	1.2e-30	75.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1H8Z6	2.1e-30	89.16	uncharacterized protein LOC111460722 OS=Cucurbita moschata OX=3662 GN=LOC1114607...	[more]
A0A6J1KRB5	2.8e-30	87.95	uncharacterized protein LOC111497967 OS=Cucurbita maxima OX=3661 GN=LOC111497967...	[more]

BLAST of Moc09g04600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16170.1	1.3e-19	56.18	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G79660.1	2.2e-16	56.10	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34774:SF1	EPHRIN-A3 PROTEIN	coord: 87..171
None	No IPR available	PANTHER	PTHR34774	EPHRIN-A3 PROTEIN	coord: 87..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g04600.1	Moc09g04600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane