Moc09g01570 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g01570
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLate embryogenesis abundant protein
Locationchr9: 1323062 .. 1323449 (-)
RNA-Seq ExpressionMoc09g01570
SyntenyMoc09g01570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAAGGTTACTGGGAGTGGTCTTTACTTCATAAGGTGTCGTTCTCATGTGCTGGTTTATGTGTTTTCTTTCTACGATTTTTCTTCGTGGAGGTTTATTTCCTGTTCTTAGTCTAATATAGCAATGCAATAGCAGGCGAATGAGCTCTTCGGTTGCAGCCGAGCAACTTAAAGCACAAACACCTGCATCAATGGTGGCGAGGAAGGTGAAGGCTGCCATGGAAACAGGGGATCGGGATGATGTTACTGCAGTAGAACAGAAAGAGACGTTTTGGATGAAAGATCCCAAGAGTGGAAACTGGATTCCGGAGAGCCACTTTGGAGATATTGATGTGGCAGAATTGAGGGAGAAATTCCTGTCTAAAAGAAAGCTATCAAACAAGTGA

mRNA sequence

ATGGCTAAGGTTACTGGGAGTGGTCTTTACTTCATAAGGCGAATGAGCTCTTCGGTTGCAGCCGAGCAACTTAAAGCACAAACACCTGCATCAATGGTGGCGAGGAAGGTGAAGGCTGCCATGGAAACAGGGGATCGGGATGATGTTACTGCAGTAGAACAGAAAGAGACGTTTTGGATGAAAGATCCCAAGAGTGGAAACTGGATTCCGGAGAGCCACTTTGGAGATATTGATGTGGCAGAATTGAGGGAGAAATTCCTGTCTAAAAGAAAGCTATCAAACAAGTGA

Coding sequence (CDS)

ATGGCTAAGGTTACTGGGAGTGGTCTTTACTTCATAAGGCGAATGAGCTCTTCGGTTGCAGCCGAGCAACTTAAAGCACAAACACCTGCATCAATGGTGGCGAGGAAGGTGAAGGCTGCCATGGAAACAGGGGATCGGGATGATGTTACTGCAGTAGAACAGAAAGAGACGTTTTGGATGAAAGATCCCAAGAGTGGAAACTGGATTCCGGAGAGCCACTTTGGAGATATTGATGTGGCAGAATTGAGGGAGAAATTCCTGTCTAAAAGAAAGCTATCAAACAAGTGA

Protein sequence

MAKVTGSGLYFIRRMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKRKLSNK
Homology
BLAST of Moc09g01570 vs. NCBI nr
Match: KAG6575415.1 (hypothetical protein SDJN03_26054, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 127.5 bits (319), Expect = 6.2e-26
Identity = 62/91 (68.13%), Postives = 73/91 (80.22%), Query Frame = 0

Query: 1  MAKVTGSGLYFIRRMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWM 60
          MAK+TG+G+YFIRR+SS VA+EQLKA+  A M  + V A +ET   DD+ AVEQK  FWM
Sbjct: 1  MAKLTGNGVYFIRRLSSLVASEQLKARATAPMTVKNVIATVETSGSDDIKAVEQKNIFWM 60

Query: 61 KDPKSGNWIPESHFGDIDVAELREKFLSKRK 92
          KDPKSGNWIPE+HFG+IDV ELREK LSK K
Sbjct: 61 KDPKSGNWIPENHFGEIDVVELREKLLSKTK 91

BLAST of Moc09g01570 vs. NCBI nr
Match: KAE8646489.1 (hypothetical protein Csa_015817 [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 3.5e-21
Identity = 58/77 (75.32%), Postives = 66/77 (85.71%), Query Frame = 0

Query: 15 MSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHF 74
          MSSSVA+EQLKAQT ASMV RKVKAA+ETG  D+   VEQK+TFWMKDPKSGNWIPE+HF
Sbjct: 1  MSSSVASEQLKAQTTASMVVRKVKAAVETGGYDN-EVVEQKKTFWMKDPKSGNWIPENHF 60

Query: 75 GDIDVAELREKFLSKRK 92
           ++DV ELREK L+K K
Sbjct: 61 EEMDVVELREKLLAKPK 76

BLAST of Moc09g01570 vs. NCBI nr
Match: KAA0059359.1 (putative Senescence-associated protein 21 [Cucumis melo var. makuwa] >TYK03967.1 putative Senescence-associated protein 21 [Cucumis melo var. makuwa])

HSP 1 Score: 110.2 bits (274), Expect = 1.0e-20
Identity = 57/78 (73.08%), Postives = 66/78 (84.62%), Query Frame = 0

Query: 15 MSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHF 74
          MSSS+A+EQLKAQT ASMV RKVKAA+ET   D+   VEQK+TFWMKDPKSGNWIPE+HF
Sbjct: 1  MSSSIASEQLKAQTTASMVVRKVKAAVETSCYDN-EVVEQKKTFWMKDPKSGNWIPENHF 60

Query: 75 GDIDVAELREKFLSKRKL 93
           +IDV ELREK L+K K+
Sbjct: 61 EEIDVVELREKLLAKPKI 77

BLAST of Moc09g01570 vs. NCBI nr
Match: EOY25450.1 (Senescence-associated gene 21, putative [Theobroma cacao])

HSP 1 Score: 91.7 bits (226), Expect = 3.8e-15
Identity = 50/91 (54.95%), Postives = 64/91 (70.33%), Query Frame = 0

Query: 1  MAKVTGSGLYFIRRMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWM 60
          MA+++      + R S +VAAE +K Q  AS++         T  R +V A EQKETFWM
Sbjct: 1  MAQLSVKSFQLLSRRSYAVAAENMKVQAVASVMRN------ATDLRAEVLA-EQKETFWM 60

Query: 61 KDPKSGNWIPESHFGDIDVAELREKFLSKRK 92
          +DPK+GNWIPE+HFGDIDVAELREKFLSK++
Sbjct: 61 RDPKTGNWIPENHFGDIDVAELREKFLSKKQ 84

BLAST of Moc09g01570 vs. NCBI nr
Match: EOY27380.1 (Senescence-associated gene 21, putative [Theobroma cacao])

HSP 1 Score: 91.3 bits (225), Expect = 4.9e-15
Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 0

Query: 1  MAKVTGSGLYFIRRMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWM 60
          MA+++      + R S +VAAE +K Q  AS+          T  R +V A EQKETFWM
Sbjct: 1  MAQLSVKSFQLLSRRSYAVAAENMKVQAVASVTRN------ATDLRAEVLA-EQKETFWM 60

Query: 61 KDPKSGNWIPESHFGDIDVAELREKFLSKRK 92
          +DPK+GNWIPE+HFGDIDVAELREKFLSK++
Sbjct: 61 RDPKTGNWIPENHFGDIDVAELREKFLSKKQ 84

BLAST of Moc09g01570 vs. ExPASy TrEMBL
Match: A0A0A0K7L4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448050 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28
Identity = 70/91 (76.92%), Postives = 79/91 (86.81%), Query Frame = 0

Query: 1  MAKVTGSGLYFIRRMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWM 60
          MAKVTG+ LYFIRRMSSSVA+EQLKAQT ASMV RKVKAA+ETG  D+   VEQK+TFWM
Sbjct: 1  MAKVTGNSLYFIRRMSSSVASEQLKAQTTASMVVRKVKAAVETGGYDN-EVVEQKKTFWM 60

Query: 61 KDPKSGNWIPESHFGDIDVAELREKFLSKRK 92
          KDPKSGNWIPE+HF ++DV ELREK L+K K
Sbjct: 61 KDPKSGNWIPENHFEEMDVVELREKLLAKPK 90

BLAST of Moc09g01570 vs. ExPASy TrEMBL
Match: A0A5D3BWU2 (Putative Senescence-associated protein 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001640 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 5.0e-21
Identity = 57/78 (73.08%), Postives = 66/78 (84.62%), Query Frame = 0

Query: 15 MSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHF 74
          MSSS+A+EQLKAQT ASMV RKVKAA+ET   D+   VEQK+TFWMKDPKSGNWIPE+HF
Sbjct: 1  MSSSIASEQLKAQTTASMVVRKVKAAVETSCYDN-EVVEQKKTFWMKDPKSGNWIPENHF 60

Query: 75 GDIDVAELREKFLSKRKL 93
           +IDV ELREK L+K K+
Sbjct: 61 EEIDVVELREKLLAKPKI 77

BLAST of Moc09g01570 vs. ExPASy TrEMBL
Match: A0A061G6G1 (Senescence-associated gene 21, putative OS=Theobroma cacao OX=3641 GN=TCM_016756 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.8e-15
Identity = 50/91 (54.95%), Postives = 64/91 (70.33%), Query Frame = 0

Query: 1  MAKVTGSGLYFIRRMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWM 60
          MA+++      + R S +VAAE +K Q  AS++         T  R +V A EQKETFWM
Sbjct: 1  MAQLSVKSFQLLSRRSYAVAAENMKVQAVASVMRN------ATDLRAEVLA-EQKETFWM 60

Query: 61 KDPKSGNWIPESHFGDIDVAELREKFLSKRK 92
          +DPK+GNWIPE+HFGDIDVAELREKFLSK++
Sbjct: 61 RDPKTGNWIPENHFGDIDVAELREKFLSKKQ 84

BLAST of Moc09g01570 vs. ExPASy TrEMBL
Match: A0A061GBY1 (Senescence-associated gene 21, putative OS=Theobroma cacao OX=3641 GN=TCM_029240 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.4e-15
Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 0

Query: 1  MAKVTGSGLYFIRRMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWM 60
          MA+++      + R S +VAAE +K Q  AS+          T  R +V A EQKETFWM
Sbjct: 1  MAQLSVKSFQLLSRRSYAVAAENMKVQAVASVTRN------ATDLRAEVLA-EQKETFWM 60

Query: 61 KDPKSGNWIPESHFGDIDVAELREKFLSKRK 92
          +DPK+GNWIPE+HFGDIDVAELREKFLSK++
Sbjct: 61 RDPKTGNWIPENHFGDIDVAELREKFLSKKQ 84

BLAST of Moc09g01570 vs. ExPASy TrEMBL
Match: A0A6J1B6Z6 (uncharacterized protein LOC110424687 OS=Herrania umbratica OX=108875 GN=LOC110424687 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.1e-15
Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 0

Query: 1  MAKVTGSGLYFIRRMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWM 60
          MA+++      + R S +VAAE +K Q  AS++         T  R +V A EQKETFWM
Sbjct: 1  MAQLSVKSFQLLSRRSYAVAAENMKVQAVASVMRN------ATDLRTEVLA-EQKETFWM 60

Query: 61 KDPKSGNWIPESHFGDIDVAELREKFLSKRK 92
          +DPK+GNWIPE+HFGDIDV ELREKFLSK++
Sbjct: 61 RDPKTGNWIPENHFGDIDVVELREKFLSKKQ 84

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6575415.16.2e-2668.13hypothetical protein SDJN03_26054, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8646489.13.5e-2175.32hypothetical protein Csa_015817 [Cucumis sativus][more]
KAA0059359.11.0e-2073.08putative Senescence-associated protein 21 [Cucumis melo var. makuwa] >TYK03967.1... [more]
EOY25450.13.8e-1554.95Senescence-associated gene 21, putative [Theobroma cacao][more]
EOY27380.14.9e-1554.95Senescence-associated gene 21, putative [Theobroma cacao][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K7L41.4e-2876.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448050 PE=4 SV=1[more]
A0A5D3BWU25.0e-2173.08Putative Senescence-associated protein 21 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A061G6G11.8e-1554.95Senescence-associated gene 21, putative OS=Theobroma cacao OX=3641 GN=TCM_016756... [more]
A0A061GBY12.4e-1554.95Senescence-associated gene 21, putative OS=Theobroma cacao OX=3641 GN=TCM_029240... [more]
A0A6J1B6Z64.1e-1553.85uncharacterized protein LOC110424687 OS=Herrania umbratica OX=108875 GN=LOC11042... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004926Late embryogenesis abundant protein, LEA_3 subgroupPFAMPF03242LEA_3coord: 13..87
e-value: 1.5E-13
score: 51.3
IPR004926Late embryogenesis abundant protein, LEA_3 subgroupPANTHERPTHR33509LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATEDcoord: 9..91
NoneNo IPR availablePANTHERPTHR33509:SF21OS02G0564600 PROTEINcoord: 9..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g01570.1Moc09g01570.1mRNA