Moc09g01090 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g01090
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	disease resistance protein (TIR-NBS-LRR class)
Location	chr9: 955543 .. 956151 (+)
RNA-Seq Expression	Moc09g01090
Synteny	Moc09g01090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATCTCTCAGATTCATAGACAAGAATGAGCCATGCTCATGCTCTAATTTCCCATCTCTCAAAGGTCTAATTTTAGAAAACATGGATAATTTGGAAGGATGGTGGGAATCAAGAGCAGGGGATCAGACTCTTCCCGTTTTTCCTCAGCTTCGATTCCTACGTATCGAGCGCTGTCCCAAGTTAACCATGCCCAAGATAGCTTCCACTCAAGCAAGTGTTAGTTTATGTGATGTTGGTGTTGAGGTGGTGAGTGCAATGGGTCCATTGTGGAATTTTGAGATTGTAAGACTCTGCGAAATTAAGGATCTGAAAGATCTAAAAATGGAATCTCAGCAAAGTTTGGGTTCTTCTTCTTTGGGTATCCCAATCCCACACATGTCCATGTCCTCGTCTATACGGCTTCAACATCTCATAATAGAGAAATGCTCCAATTTGATGAGTCTATCGGAATGGATTGGCACCATCACTTCACTTGCTACGTTGTCTATCACTGAATGTCCGAAATTAAAGTCACTACCGGAGGAAATGCGACAACTCAAATCTTTGGTAGAGCTCACCGTACGCGGTTGCCCTGAACTTGAAGGAAGATGCAAGCATGAACGATAG

mRNA sequence

ATGAGATCTCTCAGATTCATAGACAAGAATGAGCCATGCTCATGCTCTAATTTCCCATCTCTCAAAGGTCTAATTTTAGAAAACATGGATAATTTGGAAGGATGGTGGGAATCAAGAGCAGGGGATCAGACTCTTCCCGTTTTTCCTCAGCTTCGATTCCTACGTATCGAGCGCTGTCCCAAGTTAACCATGCCCAAGATAGCTTCCACTCAAGCAAGTGTTAGTTTATGTGATGTTGGTGTTGAGGTGGTGAGTGCAATGGGTCCATTGTGGAATTTTGAGATTGTAAGACTCTGCGAAATTAAGGATCTGAAAGATCTAAAAATGGAATCTCAGCAAAGTTTGGGTTCTTCTTCTTTGGGTATCCCAATCCCACACATGTCCATGTCCTCGTCTATACGGCTTCAACATCTCATAATAGAGAAATGCTCCAATTTGATGAGTCTATCGGAATGGATTGGCACCATCACTTCACTTGCTACGTTGTCTATCACTGAATGTCCGAAATTAAAGTCACTACCGGAGGAAATGCGACAACTCAAATCTTTGGTAGAGCTCACCGTACGCGGTTGCCCTGAACTTGAAGGAAGATGCAAGCATGAACGATAG

Coding sequence (CDS)

ATGAGATCTCTCAGATTCATAGACAAGAATGAGCCATGCTCATGCTCTAATTTCCCATCTCTCAAAGGTCTAATTTTAGAAAACATGGATAATTTGGAAGGATGGTGGGAATCAAGAGCAGGGGATCAGACTCTTCCCGTTTTTCCTCAGCTTCGATTCCTACGTATCGAGCGCTGTCCCAAGTTAACCATGCCCAAGATAGCTTCCACTCAAGCAAGTGTTAGTTTATGTGATGTTGGTGTTGAGGTGGTGAGTGCAATGGGTCCATTGTGGAATTTTGAGATTGTAAGACTCTGCGAAATTAAGGATCTGAAAGATCTAAAAATGGAATCTCAGCAAAGTTTGGGTTCTTCTTCTTTGGGTATCCCAATCCCACACATGTCCATGTCCTCGTCTATACGGCTTCAACATCTCATAATAGAGAAATGCTCCAATTTGATGAGTCTATCGGAATGGATTGGCACCATCACTTCACTTGCTACGTTGTCTATCACTGAATGTCCGAAATTAAAGTCACTACCGGAGGAAATGCGACAACTCAAATCTTTGGTAGAGCTCACCGTACGCGGTTGCCCTGAACTTGAAGGAAGATGCAAGCATGAACGATAG

Protein sequence

MRSLRFIDKNEPCSCSNFPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERCPKLTMPKIASTQASVSLCDVGVEVVSAMGPLWNFEIVRLCEIKDLKDLKMESQQSLGSSSLGIPIPHMSMSSSIRLQHLIIEKCSNLMSLSEWIGTITSLATLSITECPKLKSLPEEMRQLKSLVELTVRGCPELEGRCKHER

Homology

[Close]

BLAST of Moc09g01090 vs. NCBI nr
Match: XP_022147051.1 (putative disease resistance protein RGA4 [Momordica charantia])

HSP 1 Score: 246.1 bits (627), Expect = 2.5e-61
Identity = 136/205 (66.34%), Postives = 158/205 (77.07%), Query Frame = 0


Query: 1    MRSLRFIDKNEPCSCSNFPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERCP 60
            MRSL+F+DKNEP     FPSL  L L+NM NLEGWWESR   +TLP+FP+L++LRI+ CP
Sbjct: 834  MRSLKFVDKNEP-GLLCFPSLVSLRLKNMGNLEGWWESRVVGETLPIFPELQYLRIQHCP 893

Query: 61   KLT-MPKIA-STQASVSLCDVGVEVVSAMGPLWNFEIVRLCEIKDLKDLKMESQQS---- 120
            KL+ MPKIA ST  S  LCDVGV+VV+A+GPLWNFE+V L EIKDLKDL+MES Q+    
Sbjct: 894  KLSLMPKIASSTLDSFFLCDVGVQVVTAIGPLWNFEVVILQEIKDLKDLEMESHQNRNQD 953

Query: 121  LGSSSLGIPIPHMSMSSSIRLQHLIIEKCSNLMSLSEWIGTITSLATLSITECPKLKSLP 180
            LGSSSL      MS  S  RL+ L IEKCSNLMSL EWIGTITSL  ++I +CPKLKSL 
Sbjct: 954  LGSSSLS-----MSSRSPTRLRFLTIEKCSNLMSLPEWIGTITSLWKVTIIDCPKLKSLL 1013

Query: 181  EEMRQLKSLVELTVRGCPELEGRCK 200
            E MRQLKSL  LT++GCPELE RCK
Sbjct: 1014 EGMRQLKSLKYLTIKGCPELEERCK 1032

[Close]

BLAST of Moc09g01090 vs. NCBI nr
Match: XP_022147031.1 (putative disease resistance protein RGA1 isoform X3 [Momordica charantia])

HSP 1 Score: 235.7 bits (600), Expect = 3.4e-58
Identity = 131/203 (64.53%), Postives = 156/203 (76.85%), Query Frame = 0


Query: 1   MRSLRFIDK-NEPCSCSNFPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERC 60
           MRSL+FI K NEPC   +FPSL G+ L+NM NLEGWWESR   +TLP+FPQL++LR++RC
Sbjct: 1   MRSLKFIHKNNEPCCFLSFPSLIGIYLKNMPNLEGWWESRVEGETLPIFPQLQYLRLQRC 60

Query: 61  PKL-TMPKIAST-QASVSLCDVGVEVVSA-MGPLWNFEIVRLCEIKDLKDLKMESQQSLG 120
           PKL +MPKIAST Q +V L DV V+VVSA +GPL NF  +RL EIKDLKDL+ME  Q+  
Sbjct: 61  PKLSSMPKIASTRQVTVILRDVSVQVVSAIIGPLLNFHEIRLEEIKDLKDLEMEFHQN-Q 120

Query: 121 SSSLGIPIPHMSMSSSIRLQHLIIEKCSNLMSLSEWIGTITSLATLSITECPKLKSLPEE 180
           + +LG     MS  S  RL+ L IEKCSNLMSL EWIGTITSL  L I +CPKLKSLPE 
Sbjct: 121 NPNLGSSSSSMSSQSLTRLRVLKIEKCSNLMSLPEWIGTITSLWDLKIIDCPKLKSLPEG 180

Query: 181 MRQLKSLVELTVRGCPELEGRCK 200
           MRQLKSL  LT++GCP+L+ RCK
Sbjct: 181 MRQLKSLNWLTIKGCPQLQERCK 202

[Close]

BLAST of Moc09g01090 vs. NCBI nr
Match: XP_022147040.1 (putative disease resistance protein RGA1 isoform X4 [Momordica charantia])

HSP 1 Score: 235.7 bits (600), Expect = 3.4e-58
Identity = 131/203 (64.53%), Postives = 156/203 (76.85%), Query Frame = 0


Query: 1   MRSLRFIDK-NEPCSCSNFPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERC 60
           MRSL+FI K NEPC   +FPSL G+ L+NM NLEGWWESR   +TLP+FPQL++LR++RC
Sbjct: 1   MRSLKFIHKNNEPCCFLSFPSLIGIYLKNMPNLEGWWESRVEGETLPIFPQLQYLRLQRC 60

Query: 61  PKL-TMPKIAST-QASVSLCDVGVEVVSA-MGPLWNFEIVRLCEIKDLKDLKMESQQSLG 120
           PKL +MPKIAST Q +V L DV V+VVSA +GPL NF  +RL EIKDLKDL+ME  Q+  
Sbjct: 61  PKLSSMPKIASTRQVTVILRDVSVQVVSAIIGPLLNFHEIRLEEIKDLKDLEMEFHQN-Q 120

Query: 121 SSSLGIPIPHMSMSSSIRLQHLIIEKCSNLMSLSEWIGTITSLATLSITECPKLKSLPEE 180
           + +LG     MS  S  RL+ L IEKCSNLMSL EWIGTITSL  L I +CPKLKSLPE 
Sbjct: 121 NPNLGSSSSSMSSQSLTRLRVLKIEKCSNLMSLPEWIGTITSLWDLKIIDCPKLKSLPEG 180

Query: 181 MRQLKSLVELTVRGCPELEGRCK 200
           MRQLKSL  LT++GCP+L+ RCK
Sbjct: 181 MRQLKSLNWLTIKGCPQLQERCK 202

[Close]

BLAST of Moc09g01090 vs. NCBI nr
Match: XP_022147023.1 (putative disease resistance protein RGA1 isoform X2 [Momordica charantia])

HSP 1 Score: 235.7 bits (600), Expect = 3.4e-58
Identity = 131/203 (64.53%), Postives = 156/203 (76.85%), Query Frame = 0


Query: 1   MRSLRFIDK-NEPCSCSNFPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERC 60
           MRSL+FI K NEPC   +FPSL G+ L+NM NLEGWWESR   +TLP+FPQL++LR++RC
Sbjct: 1   MRSLKFIHKNNEPCCFLSFPSLIGIYLKNMPNLEGWWESRVEGETLPIFPQLQYLRLQRC 60

Query: 61  PKL-TMPKIAST-QASVSLCDVGVEVVSA-MGPLWNFEIVRLCEIKDLKDLKMESQQSLG 120
           PKL +MPKIAST Q +V L DV V+VVSA +GPL NF  +RL EIKDLKDL+ME  Q+  
Sbjct: 61  PKLSSMPKIASTRQVTVILRDVSVQVVSAIIGPLLNFHEIRLEEIKDLKDLEMEFHQN-Q 120

Query: 121 SSSLGIPIPHMSMSSSIRLQHLIIEKCSNLMSLSEWIGTITSLATLSITECPKLKSLPEE 180
           + +LG     MS  S  RL+ L IEKCSNLMSL EWIGTITSL  L I +CPKLKSLPE 
Sbjct: 121 NPNLGSSSSSMSSQSLTRLRVLKIEKCSNLMSLPEWIGTITSLWDLKIIDCPKLKSLPEG 180

Query: 181 MRQLKSLVELTVRGCPELEGRCK 200
           MRQLKSL  LT++GCP+L+ RCK
Sbjct: 181 MRQLKSLNWLTIKGCPQLQERCK 202

[Close]

BLAST of Moc09g01090 vs. NCBI nr
Match: XP_022147016.1 (putative disease resistance protein RGA1 isoform X1 [Momordica charantia])

HSP 1 Score: 235.7 bits (600), Expect = 3.4e-58
Identity = 131/203 (64.53%), Postives = 156/203 (76.85%), Query Frame = 0


Query: 1   MRSLRFIDK-NEPCSCSNFPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERC 60
           MRSL+FI K NEPC   +FPSL G+ L+NM NLEGWWESR   +TLP+FPQL++LR++RC
Sbjct: 1   MRSLKFIHKNNEPCCFLSFPSLIGIYLKNMPNLEGWWESRVEGETLPIFPQLQYLRLQRC 60

Query: 61  PKL-TMPKIAST-QASVSLCDVGVEVVSA-MGPLWNFEIVRLCEIKDLKDLKMESQQSLG 120
           PKL +MPKIAST Q +V L DV V+VVSA +GPL NF  +RL EIKDLKDL+ME  Q+  
Sbjct: 61  PKLSSMPKIASTRQVTVILRDVSVQVVSAIIGPLLNFHEIRLEEIKDLKDLEMEFHQN-Q 120

Query: 121 SSSLGIPIPHMSMSSSIRLQHLIIEKCSNLMSLSEWIGTITSLATLSITECPKLKSLPEE 180
           + +LG     MS  S  RL+ L IEKCSNLMSL EWIGTITSL  L I +CPKLKSLPE 
Sbjct: 121 NPNLGSSSSSMSSQSLTRLRVLKIEKCSNLMSLPEWIGTITSLWDLKIIDCPKLKSLPEG 180

Query: 181 MRQLKSLVELTVRGCPELEGRCK 200
           MRQLKSL  LT++GCP+L+ RCK
Sbjct: 181 MRQLKSLNWLTIKGCPQLQERCK 202

[Close]

BLAST of Moc09g01090 vs. ExPASy Swiss-Prot
Match: Q7XA40 (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09
Identity = 54/191 (28.27%), Postives = 91/191 (47.64%), Query Frame = 0


Query: 18  FPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERCPKLTMPKIASTQASVSLC 77
           FPSL+ L +    NL+G    +  +Q    FP L  ++I  CP    P ++S +      
Sbjct: 787 FPSLRKLHIGGFCNLKGLQRMKGAEQ----FPVLEEMKISDCPMFVFPTLSSVKKLEIWG 846

Query: 78  DV---GVEVVSAMGPLWNFEIVRLCEIKDLKDLKMESQQSLGSSSLGI-----PIPHMSM 137
           +    G+  +S +  L + +I     +  L +   ++ ++L   S+        +P  S+
Sbjct: 847 EADAGGLSSISNLSTLTSLKIFSNHTVTSLLEEMFKNLENLIYLSVSFLENLKELP-TSL 906

Query: 138 SSSIRLQHLIIEKCSNLMSL-SEWIGTITSLATLSITECPKLKSLPEEMRQLKSLVELTV 197
           +S   L+ L I  C  L SL  E +  ++SL  L +  C  LK LPE ++ L +L  L +
Sbjct: 907 ASLNNLKCLDIRYCYALESLPEEGLEGLSSLTELFVEHCNMLKCLPEGLQHLTTLTSLKI 966

Query: 198 RGCPELEGRCK 200
           RGCP+L  RC+
Sbjct: 967 RGCPQLIKRCE 972

[Close]

BLAST of Moc09g01090 vs. ExPASy Swiss-Prot
Match: Q7XA42 (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 1.4e-09
Identity = 56/190 (29.47%), Postives = 93/190 (48.95%), Query Frame = 0


Query: 18  FPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERCPKLTMPKIASTQA-SVSL 77
           FPSL+ L++ +  NL+G  +   G++  PV  ++ F     CP   +P ++S +   V +
Sbjct: 775 FPSLRKLVIWDFSNLKGLLKME-GEKQFPVLEEMTFY---WCPMFVIPTLSSVKTLKVIV 834

Query: 78  CDVGV-EVVSAMGPLWNFEIVRLCEIKDLKDLKMESQQSLGSSSLGI-----PIPHMSMS 137
            D  V   +S +  L + +I    E   L +   +S  +L    +        +P  S++
Sbjct: 835 TDATVLRSISNLRALTSLDISDNVEATSLPEEMFKSLANLKYLKISFFRNLKELP-TSLA 894

Query: 138 SSIRLQHLIIEKCSNLMSL-SEWIGTITSLATLSITECPKLKSLPEEMRQLKSLVELTVR 197
           S   L+ L  E C  L SL  E +  +TSL  LS++ C  LK LPE ++ L +L  LT+ 
Sbjct: 895 SLNALKSLKFEFCDALESLPEEGVKGLTSLTELSVSNCMMLKCLPEGLQHLTALTTLTIT 954

Query: 198 GCPELEGRCK 200
            CP +  RC+
Sbjct: 955 QCPIVFKRCE 959

[Close]

BLAST of Moc09g01090 vs. ExPASy Swiss-Prot
Match: Q7XBQ9 (Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.0e-09
Identity = 54/186 (29.03%), Postives = 84/186 (45.16%), Query Frame = 0


Query: 18  FPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERCPKLTMPKIASTQASVSLC 77
           FPSL+ L + +  +L+G  +    +Q    FP L  + I  CP LT+        S+ +C
Sbjct: 787 FPSLRKLDIWDFGSLKGLLKKEGEEQ----FPVLEEMIIHECPFLTLSSNLRALTSLRIC 846

Query: 78  --DVGVEVVSAM-GPLWNFEIVRLCEIKDLKDLKMESQQSLGSSSLGIPIPHMSMSSSIR 137
              V       M   L N + + +    +LK+L                    S++S   
Sbjct: 847 YNKVATSFPEEMFKNLANLKYLTISRCNNLKELP------------------TSLASLNA 906

Query: 138 LQHLIIEKCSNLMSL-SEWIGTITSLATLSITECPKLKSLPEEMRQLKSLVELTVRGCPE 197
           L+ L I+ C  L SL  E +  ++SL  L +  C  LK LPE ++ L +L  L +RGCP+
Sbjct: 907 LKSLKIQLCCALESLPEEGLEGLSSLTELFVEHCNMLKCLPEGLQHLTTLTSLKIRGCPQ 950

Query: 198 LEGRCK 200
           L  RC+
Sbjct: 967 LIKRCE 950

[Close]

BLAST of Moc09g01090 vs. ExPASy Swiss-Prot
Match: P0DI17 (Probable disease resistance protein RF9 OS=Arabidopsis thaliana OX=3702 GN=RF9 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 8.3e-07
Identity = 53/187 (28.34%), Postives = 80/187 (42.78%), Query Frame = 0


Query: 1   MRSLRFIDKNEPCSCSNFPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERCP 60
           +R   F  K   CS   FP L+ L ++ ++  E W   +  + ++PV   L      +  
Sbjct: 808 LRRKSFSGKEMVCSSGGFPQLQKLSIKGLEEWEDW---KVEESSMPVLHTLDIRDCRKLK 867

Query: 61  KLTMPKIASTQASVSLCDVGVEVVSAMGPLWNFEIVRLCEIKDLKDL-KMESQQSLGSSS 120
           +L    + S   S+SL    +E      P+   E  RL  +K+L+ L +  S + +  + 
Sbjct: 868 QLPDEHLPSHLTSISLFFCCLE----EDPMPTLE--RLVHLKELQLLFRSFSGRIMVCAG 927

Query: 121 LGIPIPHMSMSSSIRLQHLIIEKCSNLMSLSEWI---GTITSLATLSITECPKLKSLPEE 180
            G P  H               K S L  L EWI   G++  L TL I  CPKLK LP  
Sbjct: 928 SGFPQLHKL-------------KLSELDGLEEWIVEDGSMPQLHTLEIRRCPKLKKLPNG 972

Query: 181 MRQLKSL 184
             QL++L
Sbjct: 988 FPQLQNL 972

[Close]

BLAST of Moc09g01090 vs. ExPASy Swiss-Prot
Match: P0DI18 (Probable disease resistance protein RDL6 OS=Arabidopsis thaliana OX=3702 GN=RDL6 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 8.3e-07
Identity = 53/187 (28.34%), Postives = 80/187 (42.78%), Query Frame = 0


Query: 1   MRSLRFIDKNEPCSCSNFPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERCP 60
           +R   F  K   CS   FP L+ L ++ ++  E W   +  + ++PV   L      +  
Sbjct: 808 LRRKSFSGKEMVCSSGGFPQLQKLSIKGLEEWEDW---KVEESSMPVLHTLDIRDCRKLK 867

Query: 61  KLTMPKIASTQASVSLCDVGVEVVSAMGPLWNFEIVRLCEIKDLKDL-KMESQQSLGSSS 120
           +L    + S   S+SL    +E      P+   E  RL  +K+L+ L +  S + +  + 
Sbjct: 868 QLPDEHLPSHLTSISLFFCCLE----EDPMPTLE--RLVHLKELQLLFRSFSGRIMVCAG 927

Query: 121 LGIPIPHMSMSSSIRLQHLIIEKCSNLMSLSEWI---GTITSLATLSITECPKLKSLPEE 180
            G P  H               K S L  L EWI   G++  L TL I  CPKLK LP  
Sbjct: 928 SGFPQLHKL-------------KLSELDGLEEWIVEDGSMPQLHTLEIRRCPKLKKLPNG 972

Query: 181 MRQLKSL 184
             QL++L
Sbjct: 988 FPQLQNL 972

[Close]

BLAST of Moc09g01090 vs. ExPASy TrEMBL
Match: A0A6J1D168 (putative disease resistance protein RGA4 OS=Momordica charantia OX=3673 GN=LOC111016078 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.2e-61
Identity = 136/205 (66.34%), Postives = 158/205 (77.07%), Query Frame = 0


Query: 1    MRSLRFIDKNEPCSCSNFPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERCP 60
            MRSL+F+DKNEP     FPSL  L L+NM NLEGWWESR   +TLP+FP+L++LRI+ CP
Sbjct: 834  MRSLKFVDKNEP-GLLCFPSLVSLRLKNMGNLEGWWESRVVGETLPIFPELQYLRIQHCP 893

Query: 61   KLT-MPKIA-STQASVSLCDVGVEVVSAMGPLWNFEIVRLCEIKDLKDLKMESQQS---- 120
            KL+ MPKIA ST  S  LCDVGV+VV+A+GPLWNFE+V L EIKDLKDL+MES Q+    
Sbjct: 894  KLSLMPKIASSTLDSFFLCDVGVQVVTAIGPLWNFEVVILQEIKDLKDLEMESHQNRNQD 953

Query: 121  LGSSSLGIPIPHMSMSSSIRLQHLIIEKCSNLMSLSEWIGTITSLATLSITECPKLKSLP 180
            LGSSSL      MS  S  RL+ L IEKCSNLMSL EWIGTITSL  ++I +CPKLKSL 
Sbjct: 954  LGSSSLS-----MSSRSPTRLRFLTIEKCSNLMSLPEWIGTITSLWKVTIIDCPKLKSLL 1013

Query: 181  EEMRQLKSLVELTVRGCPELEGRCK 200
            E MRQLKSL  LT++GCPELE RCK
Sbjct: 1014 EGMRQLKSLKYLTIKGCPELEERCK 1032

[Close]

BLAST of Moc09g01090 vs. ExPASy TrEMBL
Match: A0A6J1D046 (putative disease resistance protein RGA1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016055 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.7e-58
Identity = 131/203 (64.53%), Postives = 156/203 (76.85%), Query Frame = 0


Query: 1   MRSLRFIDK-NEPCSCSNFPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERC 60
           MRSL+FI K NEPC   +FPSL G+ L+NM NLEGWWESR   +TLP+FPQL++LR++RC
Sbjct: 1   MRSLKFIHKNNEPCCFLSFPSLIGIYLKNMPNLEGWWESRVEGETLPIFPQLQYLRLQRC 60

Query: 61  PKL-TMPKIAST-QASVSLCDVGVEVVSA-MGPLWNFEIVRLCEIKDLKDLKMESQQSLG 120
           PKL +MPKIAST Q +V L DV V+VVSA +GPL NF  +RL EIKDLKDL+ME  Q+  
Sbjct: 61  PKLSSMPKIASTRQVTVILRDVSVQVVSAIIGPLLNFHEIRLEEIKDLKDLEMEFHQN-Q 120

Query: 121 SSSLGIPIPHMSMSSSIRLQHLIIEKCSNLMSLSEWIGTITSLATLSITECPKLKSLPEE 180
           + +LG     MS  S  RL+ L IEKCSNLMSL EWIGTITSL  L I +CPKLKSLPE 
Sbjct: 121 NPNLGSSSSSMSSQSLTRLRVLKIEKCSNLMSLPEWIGTITSLWDLKIIDCPKLKSLPEG 180

Query: 181 MRQLKSLVELTVRGCPELEGRCK 200
           MRQLKSL  LT++GCP+L+ RCK
Sbjct: 181 MRQLKSLNWLTIKGCPQLQERCK 202

[Close]

BLAST of Moc09g01090 vs. ExPASy TrEMBL
Match: A0A6J1CZ13 (putative disease resistance protein RGA1 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111016055 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.7e-58
Identity = 131/203 (64.53%), Postives = 156/203 (76.85%), Query Frame = 0


Query: 1   MRSLRFIDK-NEPCSCSNFPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERC 60
           MRSL+FI K NEPC   +FPSL G+ L+NM NLEGWWESR   +TLP+FPQL++LR++RC
Sbjct: 1   MRSLKFIHKNNEPCCFLSFPSLIGIYLKNMPNLEGWWESRVEGETLPIFPQLQYLRLQRC 60

Query: 61  PKL-TMPKIAST-QASVSLCDVGVEVVSA-MGPLWNFEIVRLCEIKDLKDLKMESQQSLG 120
           PKL +MPKIAST Q +V L DV V+VVSA +GPL NF  +RL EIKDLKDL+ME  Q+  
Sbjct: 61  PKLSSMPKIASTRQVTVILRDVSVQVVSAIIGPLLNFHEIRLEEIKDLKDLEMEFHQN-Q 120

Query: 121 SSSLGIPIPHMSMSSSIRLQHLIIEKCSNLMSLSEWIGTITSLATLSITECPKLKSLPEE 180
           + +LG     MS  S  RL+ L IEKCSNLMSL EWIGTITSL  L I +CPKLKSLPE 
Sbjct: 121 NPNLGSSSSSMSSQSLTRLRVLKIEKCSNLMSLPEWIGTITSLWDLKIIDCPKLKSLPEG 180

Query: 181 MRQLKSLVELTVRGCPELEGRCK 200
           MRQLKSL  LT++GCP+L+ RCK
Sbjct: 181 MRQLKSLNWLTIKGCPQLQERCK 202

[Close]

BLAST of Moc09g01090 vs. ExPASy TrEMBL
Match: A0A6J1D145 (putative disease resistance protein RGA1 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111016055 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.7e-58
Identity = 131/203 (64.53%), Postives = 156/203 (76.85%), Query Frame = 0


Query: 1   MRSLRFIDK-NEPCSCSNFPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERC 60
           MRSL+FI K NEPC   +FPSL G+ L+NM NLEGWWESR   +TLP+FPQL++LR++RC
Sbjct: 1   MRSLKFIHKNNEPCCFLSFPSLIGIYLKNMPNLEGWWESRVEGETLPIFPQLQYLRLQRC 60

Query: 61  PKL-TMPKIAST-QASVSLCDVGVEVVSA-MGPLWNFEIVRLCEIKDLKDLKMESQQSLG 120
           PKL +MPKIAST Q +V L DV V+VVSA +GPL NF  +RL EIKDLKDL+ME  Q+  
Sbjct: 61  PKLSSMPKIASTRQVTVILRDVSVQVVSAIIGPLLNFHEIRLEEIKDLKDLEMEFHQN-Q 120

Query: 121 SSSLGIPIPHMSMSSSIRLQHLIIEKCSNLMSLSEWIGTITSLATLSITECPKLKSLPEE 180
           + +LG     MS  S  RL+ L IEKCSNLMSL EWIGTITSL  L I +CPKLKSLPE 
Sbjct: 121 NPNLGSSSSSMSSQSLTRLRVLKIEKCSNLMSLPEWIGTITSLWDLKIIDCPKLKSLPEG 180

Query: 181 MRQLKSLVELTVRGCPELEGRCK 200
           MRQLKSL  LT++GCP+L+ RCK
Sbjct: 181 MRQLKSLNWLTIKGCPQLQERCK 202

[Close]

BLAST of Moc09g01090 vs. ExPASy TrEMBL
Match: A0A6J1D129 (putative disease resistance protein RGA1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016055 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.7e-58
Identity = 131/203 (64.53%), Postives = 156/203 (76.85%), Query Frame = 0


Query: 1   MRSLRFIDK-NEPCSCSNFPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERC 60
           MRSL+FI K NEPC   +FPSL G+ L+NM NLEGWWESR   +TLP+FPQL++LR++RC
Sbjct: 1   MRSLKFIHKNNEPCCFLSFPSLIGIYLKNMPNLEGWWESRVEGETLPIFPQLQYLRLQRC 60

Query: 61  PKL-TMPKIAST-QASVSLCDVGVEVVSA-MGPLWNFEIVRLCEIKDLKDLKMESQQSLG 120
           PKL +MPKIAST Q +V L DV V+VVSA +GPL NF  +RL EIKDLKDL+ME  Q+  
Sbjct: 61  PKLSSMPKIASTRQVTVILRDVSVQVVSAIIGPLLNFHEIRLEEIKDLKDLEMEFHQN-Q 120

Query: 121 SSSLGIPIPHMSMSSSIRLQHLIIEKCSNLMSLSEWIGTITSLATLSITECPKLKSLPEE 180
           + +LG     MS  S  RL+ L IEKCSNLMSL EWIGTITSL  L I +CPKLKSLPE 
Sbjct: 121 NPNLGSSSSSMSSQSLTRLRVLKIEKCSNLMSLPEWIGTITSLWDLKIIDCPKLKSLPEG 180

Query: 181 MRQLKSLVELTVRGCPELEGRCK 200
           MRQLKSL  LT++GCP+L+ RCK
Sbjct: 181 MRQLKSLNWLTIKGCPQLQERCK 202

[Close]

BLAST of Moc09g01090 vs. TAIR 10
Match: AT1G58848.1 (Disease resistance protein (CC-NBS-LRR class) family )

HSP 1 Score: 55.5 bits (132), Expect = 5.9e-08
Identity = 53/187 (28.34%), Postives = 80/187 (42.78%), Query Frame = 0


Query: 1   MRSLRFIDKNEPCSCSNFPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERCP 60
           +R   F  K   CS   FP L+ L ++ ++  E W   +  + ++PV   L      +  
Sbjct: 808 LRRKSFSGKEMVCSSGGFPQLQKLSIKGLEEWEDW---KVEESSMPVLHTLDIRDCRKLK 867

Query: 61  KLTMPKIASTQASVSLCDVGVEVVSAMGPLWNFEIVRLCEIKDLKDL-KMESQQSLGSSS 120
           +L    + S   S+SL    +E      P+   E  RL  +K+L+ L +  S + +  + 
Sbjct: 868 QLPDEHLPSHLTSISLFFCCLE----EDPMPTLE--RLVHLKELQLLFRSFSGRIMVCAG 927

Query: 121 LGIPIPHMSMSSSIRLQHLIIEKCSNLMSLSEWI---GTITSLATLSITECPKLKSLPEE 180
            G P  H               K S L  L EWI   G++  L TL I  CPKLK LP  
Sbjct: 928 SGFPQLHKL-------------KLSELDGLEEWIVEDGSMPQLHTLEIRRCPKLKKLPNG 972

Query: 181 MRQLKSL 184
             QL++L
Sbjct: 988 FPQLQNL 972

[Close]

BLAST of Moc09g01090 vs. TAIR 10
Match: AT1G59218.1 (Disease resistance protein (CC-NBS-LRR class) family )

HSP 1 Score: 55.5 bits (132), Expect = 5.9e-08
Identity = 53/187 (28.34%), Postives = 80/187 (42.78%), Query Frame = 0


Query: 1   MRSLRFIDKNEPCSCSNFPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERCP 60
           +R   F  K   CS   FP L+ L ++ ++  E W   +  + ++PV   L      +  
Sbjct: 808 LRRKSFSGKEMVCSSGGFPQLQKLSIKGLEEWEDW---KVEESSMPVLHTLDIRDCRKLK 867

Query: 61  KLTMPKIASTQASVSLCDVGVEVVSAMGPLWNFEIVRLCEIKDLKDL-KMESQQSLGSSS 120
           +L    + S   S+SL    +E      P+   E  RL  +K+L+ L +  S + +  + 
Sbjct: 868 QLPDEHLPSHLTSISLFFCCLE----EDPMPTLE--RLVHLKELQLLFRSFSGRIMVCAG 927

Query: 121 LGIPIPHMSMSSSIRLQHLIIEKCSNLMSLSEWI---GTITSLATLSITECPKLKSLPEE 180
            G P  H               K S L  L EWI   G++  L TL I  CPKLK LP  
Sbjct: 928 SGFPQLHKL-------------KLSELDGLEEWIVEDGSMPQLHTLEIRRCPKLKKLPNG 972

Query: 181 MRQLKSL 184
             QL++L
Sbjct: 988 FPQLQNL 972

[Close]

BLAST of Moc09g01090 vs. TAIR 10
Match: AT1G58848.2 (Disease resistance protein (CC-NBS-LRR class) family )

HSP 1 Score: 55.5 bits (132), Expect = 5.9e-08
Identity = 53/187 (28.34%), Postives = 80/187 (42.78%), Query Frame = 0


Query: 1   MRSLRFIDKNEPCSCSNFPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERCP 60
           +R   F  K   CS   FP L+ L ++ ++  E W   +  + ++PV   L      +  
Sbjct: 808 LRRKSFSGKEMVCSSGGFPQLQKLSIKGLEEWEDW---KVEESSMPVLHTLDIRDCRKLK 867

Query: 61  KLTMPKIASTQASVSLCDVGVEVVSAMGPLWNFEIVRLCEIKDLKDL-KMESQQSLGSSS 120
           +L    + S   S+SL    +E      P+   E  RL  +K+L+ L +  S + +  + 
Sbjct: 868 QLPDEHLPSHLTSISLFFCCLE----EDPMPTLE--RLVHLKELQLLFRSFSGRIMVCAG 927

Query: 121 LGIPIPHMSMSSSIRLQHLIIEKCSNLMSLSEWI---GTITSLATLSITECPKLKSLPEE 180
            G P  H               K S L  L EWI   G++  L TL I  CPKLK LP  
Sbjct: 928 SGFPQLHKL-------------KLSELDGLEEWIVEDGSMPQLHTLEIRRCPKLKKLPNG 972

Query: 181 MRQLKSL 184
             QL++L
Sbjct: 988 FPQLQNL 972

[Close]

BLAST of Moc09g01090 vs. TAIR 10
Match: AT1G59218.2 (Disease resistance protein (CC-NBS-LRR class) family )

HSP 1 Score: 55.5 bits (132), Expect = 5.9e-08
Identity = 53/187 (28.34%), Postives = 80/187 (42.78%), Query Frame = 0


Query: 1   MRSLRFIDKNEPCSCSNFPSLKGLILENMDNLEGWWESRAGDQTLPVFPQLRFLRIERCP 60
           +R   F  K   CS   FP L+ L ++ ++  E W   +  + ++PV   L      +  
Sbjct: 808 LRRKSFSGKEMVCSSGGFPQLQKLSIKGLEEWEDW---KVEESSMPVLHTLDIRDCRKLK 867

Query: 61  KLTMPKIASTQASVSLCDVGVEVVSAMGPLWNFEIVRLCEIKDLKDL-KMESQQSLGSSS 120
           +L    + S   S+SL    +E      P+   E  RL  +K+L+ L +  S + +  + 
Sbjct: 868 QLPDEHLPSHLTSISLFFCCLE----EDPMPTLE--RLVHLKELQLLFRSFSGRIMVCAG 927

Query: 121 LGIPIPHMSMSSSIRLQHLIIEKCSNLMSLSEWI---GTITSLATLSITECPKLKSLPEE 180
            G P  H               K S L  L EWI   G++  L TL I  CPKLK LP  
Sbjct: 928 SGFPQLHKL-------------KLSELDGLEEWIVEDGSMPQLHTLEIRRCPKLKKLPNG 972

Query: 181 MRQLKSL 184
             QL++L
Sbjct: 988 FPQLQNL 972

[Close]

BLAST of Moc09g01090 vs. TAIR 10
Match: AT1G69550.1 (disease resistance protein (TIR-NBS-LRR class) )

HSP 1 Score: 54.7 bits (130), Expect = 1.0e-07
Identity = 39/122 (31.97%), Postives = 65/122 (53.28%), Query Frame = 0


Query: 81  VEVVSAMGPLWNFEIVRLCEIKDLKDL--------KMESQQSLGSSSLGIPIPHMSMSSS 140
           VE+ S++G L N +++ L     L +L         ++     G SSL + +P +S+ + 
Sbjct: 850 VEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLDLSGCSSL-VELP-LSIGNL 909

Query: 141 IRLQHLIIEKCSNLMSLSEWIGTITSLATLSITECPKLKSLPEEMRQLKSLVELTVRGCP 195
           I LQ L + +CS+L+ L   IG + +L TL+++EC  L  LP  +  L +L EL +  C 
Sbjct: 910 INLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECS 969

The following BLAST results are available for this feature:

BLAST of Moc09g01090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147051.1	2.5e-61	66.34	putative disease resistance protein RGA4 [Momordica charantia]	[more]
XP_022147031.1	3.4e-58	64.53	putative disease resistance protein RGA1 isoform X3 [Momordica charantia]	[more]
XP_022147040.1	3.4e-58	64.53	putative disease resistance protein RGA1 isoform X4 [Momordica charantia]	[more]
XP_022147023.1	3.4e-58	64.53	putative disease resistance protein RGA1 isoform X2 [Momordica charantia]	[more]
XP_022147016.1	3.4e-58	64.53	putative disease resistance protein RGA1 isoform X1 [Momordica charantia]	[more]

BLAST of Moc09g01090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XA40	1.1e-09	28.27	Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=R...	[more]
Q7XA42	1.4e-09	29.47	Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=R...	[more]
Q7XBQ9	4.0e-09	29.03	Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 ...	[more]
P0DI17	8.3e-07	28.34	Probable disease resistance protein RF9 OS=Arabidopsis thaliana OX=3702 GN=RF9 P...	[more]
P0DI18	8.3e-07	28.34	Probable disease resistance protein RDL6 OS=Arabidopsis thaliana OX=3702 GN=RDL6...	[more]

BLAST of Moc09g01090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D168	1.2e-61	66.34	putative disease resistance protein RGA4 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1D046	1.7e-58	64.53	putative disease resistance protein RGA1 isoform X2 OS=Momordica charantia OX=36...	[more]
A0A6J1CZ13	1.7e-58	64.53	putative disease resistance protein RGA1 isoform X4 OS=Momordica charantia OX=36...	[more]
A0A6J1D145	1.7e-58	64.53	putative disease resistance protein RGA1 isoform X3 OS=Momordica charantia OX=36...	[more]
A0A6J1D129	1.7e-58	64.53	putative disease resistance protein RGA1 isoform X1 OS=Momordica charantia OX=36...	[more]

BLAST of Moc09g01090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G58848.1	5.9e-08	28.34	Disease resistance protein (CC-NBS-LRR class) family	[more]
AT1G59218.1	5.9e-08	28.34	Disease resistance protein (CC-NBS-LRR class) family	[more]
AT1G58848.2	5.9e-08	28.34	Disease resistance protein (CC-NBS-LRR class) family	[more]
AT1G59218.2	5.9e-08	28.34	Disease resistance protein (CC-NBS-LRR class) family	[more]
AT1G69550.1	1.0e-07	31.97	disease resistance protein (TIR-NBS-LRR class)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 89..199 e-value: 2.9E-16 score: 60.9 coord: 1..77 e-value: 1.6E-5 score: 25.6
None	No IPR available	PANTHER	PTHR34630	OS11G0677101 PROTEIN	coord: 10..198
None	No IPR available	PANTHER	PTHR34630:SF13	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	coord: 10..198
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 10..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g01090.1	Moc09g01090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0043167	ion binding
molecular_function	GO:0097159	organic cyclic compound binding