Moc09g00940 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g00940
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	RPM1-interacting protein 4-like
Location	chr9: 867010 .. 870549 (+)
RNA-Seq Expression	Moc09g00940
Synteny	Moc09g00940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTAAGTTTCTGTTCCTCCATTTTCTTTCTGTTTGTTTGTTTGGTTGCCGAGAAAACCGCCAGGAAACACAAGAGAAAATCAAATTAGAATCCCATTATCGTGCTACTTATTTGTGTTGTTGAGCGGCGGTCGTCAGATCTGTAAAGTTTGTGTTTTGGGCAGTCTGAAAAATCTGTCTTCTTTTTGATTTCTCGTCCTCTGTTTCAAGATGAAGTTTCTCTGTTTTCTTTTGACTTCTGTTTTTAACATGGCAAGCAAACCTTCAAATCACTTTTAATTTCTTGTTTAATTGATCTGCCTGTTAAACTAGAAAAGCTTCCACTTTATGGTGTTAGAAAAGCGTTCCTAAAAAGATCTATAATAGGCCTGAACTATTTTTATTATTAGTTTTGAACTTTACCTGTCATTTTATATAAATCCCAAAATAGTAATTAACCCTGTATTTAGTTTACTTTGGATTTCAAAATTAACATAAAATACAACAAATAATTATCAATATTGATCGATGAAGAAATGATATAATAAAAATTCGAACAAAGAATCTCTTACTCTAATTAGGTACGGAAATATACAAAACAAAAAATCATCAGAGAATAGTATCTAATACCATTGAGGTGATAGAAATGTCTACAGTGATTCATGTTAAGTTTTGGTTGTAGTCAAAGGCCAAAAGCTTAAAAAGAAATTATGGGATATCTGATCTTTGATTTTATACTCATTTTTAGCAGCTTAAAAATTAAACCCAAAATTTAAGTTGGAACCTTTTTTTCTTTTTTTCCAATATAAAACTTCAATCTTATATGGCATAATAAATTAATGTTACATCCAAAAACTTTAATCTTATATATGTATATTGTTATCAGTTGATTTAAGTTTGGGAAGTTTTTTTGATGAAAGAATGTATATTTTGTTGGGGCAACAGCAGCAGCAACGGTCACATGTACCACCGTTTGGTAACTGGGAAAACGAAGGGAATGTTCCATACACAGTGTTCTTCGACAAGGCCAGAAAAGGCCGAGGCGGCGGGCCAATCAGAAACCCGAACGATCCCGAAGAGTATCCCGACGTGTTCTCCGACAACTCACATTCCCATGAGCCTCCTCCTTCCATGCCCATGCCTAAAGATGACCCTCAAACACTTAAACCTACACCTACAGCTCATGAGAGGAGACGGAGCCGGGAAGATGGTGCCTCCCGACAACCCTACGCCAACTCCCCCGGCCACCGTGAGAATCCTGGCCGGAGACAGAGTGGCTCTGAGTACAGCATTGACCGCTCTCCTCTCCACCGTCATGCAAAACCTACCGGTCGAGAAAGCCCAGTCGCGGAGGGCAAGAGCCTCGATGGGGGCCATGGCAATCGTGGGAAGACTAGAATGAAGCCGGTTTTACGCGATGATGCTGTAAGTCTTAAGTTTCTTACCTTTTATTTTTTGAACGACTTATTTCGATGTCTTGTCTAGTTGAACTGTATGTCTATAGAATAAAATTTTAATAGAGAAATAAAGATGATCTAAGAGACGAAAGTTTTTAATTATTCCTTTAAACTTCTAAATATTGGTAGAAATTATGAGACCTTCATTTTCCTCTAAATTTTCGTTATTACGTGGTGTAAAGTTCATCCTCACTCAATTATCAATAATGAGAGACTAAATTGAAACTTTCTAAACTTTCACATATTCCCTAGAGAAAAATTGAAAAAACACCCAAACATCGTACTAAAAATGACATATTAGTGATATAGGAAAGATAAATTGTCATATTTGCAACTATGACAGCTCGTACCTACCCTATAATTTCCTAGTTTAGAATTTTAGAGACAAAAAATGAAATAATATGCTAAAAATTTAGATTCAATTACAGGTTTGATTCTTAAAATATCTAATAAATTCTCAAGTTTTAATTTTGTGTCTAATATATCTTGTCATATAAAATGGAAAGCTTTTAACCACTCTTAAGAATCTATTCAACACATGTTAGGAACTTGTACGTTTTGTAAACTTTTTTTTTCCTTTTTCGTTTTCGAATAATGAAATTTTTTGTATCAATATTCACAAGGCTTCATTTAAAAATCAATGAGAGAAGAATTGTCATGTATATTATGAACCTTTATTAAGTTAAGTCTCTTATCTTGGATCTTTAACATGGTTCAGCCAGAAGGGACGGCGGTGCCGAAGTTCGGGGCGTGGGATGTGAATAATCCGGCATCGGCCGACGGTTTTACGCACATTTTCGGGAAAGTTCGAGAGGAAAGGATAGGCCCTGGAACACCACCTGTTGTGCATTCTTCTTCACCTTACAACAATGTTCATAACCAAAAAACCGACCACAATGCTAAGGTAAACTCACCTCTCTCTCATTTTGCTCTGTTCTTCAATTTCTTTCCTTTTATTGTTCGATAGATGGAGCATAATAATCAACGTTCTAACTTCTTGTTTCAATCTCAGTTGAATTATACGAAAATGAGAATAAGTTTCGATAATATCATTGTGCTTTAAAAAATTTCATTTTTACCTTTAAACTTTAAACTTGTTTTAAAACTACTCTTACGGAAAGGTGACATTCCGACAACTTGTAAAATAATAGCATACATAACAAAGACTTCAAGTTTCATTTATGCTCCTGAACTTATGATACGTTTCAATTATACCATTATCATTTAAGAAGTTTCATTTTTAATCTTAACCATTGAAATTGTTTCGAAACAACATTTCATTAGCTTCCCTACTTAAAATAAAGATGGAAATATGACGTCGTGATGAACCGTAGGAAAAAGAATATCAAAATCTTTGAAATAATATTATATAATTTGGAGACAAAGGAATAAATTTAGGGATTAGGATAAAATTAATATTGTTTCTTCCCCTCAAGATCAAAAGAGGGAGGAAAACAAAAGTTCTTTTTTAGGATAAGTAAACCGCTAGGATGGACGAGCAGATTGGAAGAGAGAAATAAAGAAATTTAAGATGAAAATCACACCTATAAACTTTTTTTTTTGGTTAAATTTCTTACCTTTGAAGATGAAAATTATCTTCATTTTTCGGGAAGTCTTTTTCTTTGTTGTCTCCTAGATTCCAAAGACCCTACACTTTCACTCATGAATTATGAAACTTTCTTTCTTGACTTCTCTCTCCTTCGATTTTTCCAGTGTTTGAGTCTAAGAGATTGTAATTTTGACCGATACATGACTTTTCTCACAATATGTGGTTTCTCTCATCATTTCGACTAGAATTCTATCTCCTAAATCTATTCTCTCTCCTTTGGAGACAATTTGAATGTGACTTTGAAACCCACCATAAAATCTAAGGGCATAACTGAAACTACCACCTATGCCACGTGTACCACTATTTTAAAAGTCATTCCGTCGTCATTTTAACGGAAAAGTTGATGGCACCGTAATTTTGAAAGAAATCTAAAGTTTAAGTGTAAATAAAGCAACAAATAATTCAAAATTTAATGTTATTATTCAAACATGAATTAAAATATTATTTGTCTGATTTTGCAGGGATGCTGCTTTCCATGGCTGAGAAAATAA

mRNA sequence

ATGGCGCAGCAGCAACGGTCACATGTACCACCGTTTGGTAACTGGGAAAACGAAGGGAATGTTCCATACACAGTGTTCTTCGACAAGGCCAGAAAAGGCCGAGGCGGCGGGCCAATCAGAAACCCGAACGATCCCGAAGAGTATCCCGACGTGTTCTCCGACAACTCACATTCCCATGAGCCTCCTCCTTCCATGCCCATGCCTAAAGATGACCCTCAAACACTTAAACCTACACCTACAGCTCATGAGAGGAGACGGAGCCGGGAAGATGGTGCCTCCCGACAACCCTACGCCAACTCCCCCGGCCACCGTGAGAATCCTGGCCGGAGACAGAGTGGCTCTGAGTACAGCATTGACCGCTCTCCTCTCCACCGTCATGCAAAACCTACCGGTCGAGAAAGCCCAGTCGCGGAGGGCAAGAGCCTCGATGGGGGCCATGGCAATCGTGGGAAGACTAGAATGAAGCCGGTTTTACGCGATGATGCTCCAGAAGGGACGGCGGTGCCGAAGTTCGGGGCGTGGGATGTGAATAATCCGGCATCGGCCGACGGTTTTACGCACATTTTCGGGAAAGTTCGAGAGGAAAGGATAGGCCCTGGAACACCACCTGTTGTGCATTCTTCTTCACCTTACAACAATGTTCATAACCAAAAAACCGACCACAATGCTAAGGGATGCTGCTTTCCATGGCTGAGAAAATAA

Coding sequence (CDS)

ATGGCGCAGCAGCAACGGTCACATGTACCACCGTTTGGTAACTGGGAAAACGAAGGGAATGTTCCATACACAGTGTTCTTCGACAAGGCCAGAAAAGGCCGAGGCGGCGGGCCAATCAGAAACCCGAACGATCCCGAAGAGTATCCCGACGTGTTCTCCGACAACTCACATTCCCATGAGCCTCCTCCTTCCATGCCCATGCCTAAAGATGACCCTCAAACACTTAAACCTACACCTACAGCTCATGAGAGGAGACGGAGCCGGGAAGATGGTGCCTCCCGACAACCCTACGCCAACTCCCCCGGCCACCGTGAGAATCCTGGCCGGAGACAGAGTGGCTCTGAGTACAGCATTGACCGCTCTCCTCTCCACCGTCATGCAAAACCTACCGGTCGAGAAAGCCCAGTCGCGGAGGGCAAGAGCCTCGATGGGGGCCATGGCAATCGTGGGAAGACTAGAATGAAGCCGGTTTTACGCGATGATGCTCCAGAAGGGACGGCGGTGCCGAAGTTCGGGGCGTGGGATGTGAATAATCCGGCATCGGCCGACGGTTTTACGCACATTTTCGGGAAAGTTCGAGAGGAAAGGATAGGCCCTGGAACACCACCTGTTGTGCATTCTTCTTCACCTTACAACAATGTTCATAACCAAAAAACCGACCACAATGCTAAGGGATGCTGCTTTCCATGGCTGAGAAAATAA

Protein sequence

MAQQQRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDVFSDNSHSHEPPPSMPMPKDDPQTLKPTPTAHERRRSREDGASRQPYANSPGHRENPGRRQSGSEYSIDRSPLHRHAKPTGRESPVAEGKSLDGGHGNRGKTRMKPVLRDDAPEGTAVPKFGAWDVNNPASADGFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAKGCCFPWLRK

Homology

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BLAST of Moc09g00940 vs. NCBI nr
Match: XP_022145992.1 (RPM1-interacting protein 4-like [Momordica charantia])

HSP 1 Score: 492.3 bits (1266), Expect = 2.3e-135
Identity = 232/233 (99.57%), Postives = 232/233 (99.57%), Query Frame = 0


Query: 1   MAQQQRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDVFSDNSHSHE 60
           MAQQQRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDVFSDNSHSHE
Sbjct: 1   MAQQQRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDVFSDNSHSHE 60

Query: 61  PPPSMPMPKDDPQTLKPTPTAHERRRSREDGASRQPYANSPGHRENPGRRQSGSEYSIDR 120
           PPPSMPMPKDDPQTLKPTPTAHERRRSREDGASRQPYANSPGHRENPGRRQSGSEYSIDR
Sbjct: 61  PPPSMPMPKDDPQTLKPTPTAHERRRSREDGASRQPYANSPGHRENPGRRQSGSEYSIDR 120

Query: 121 SPLHRHAKPTGRESPVAEGKSLDGGHGNRGKTRMKPVLRDDAPEGTAVPKFGAWDVNNPA 180
           SPLHRHAKPTGRESPVAEGKSLDGGHGNRGKTRMKPVLRDDAPEGTAVPKFG WDVNNPA
Sbjct: 121 SPLHRHAKPTGRESPVAEGKSLDGGHGNRGKTRMKPVLRDDAPEGTAVPKFGXWDVNNPA 180

Query: 181 SADGFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAKGCCFPWLRK 234
           SADGFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAKGCCFPWLRK
Sbjct: 181 SADGFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAKGCCFPWLRK 233

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BLAST of Moc09g00940 vs. NCBI nr
Match: KAG6575990.1 (RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 362.8 bits (930), Expect = 2.1e-96
Identity = 178/230 (77.39%), Postives = 195/230 (84.78%), Query Frame = 0


Query: 5   QRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDVFSDNSHSHEP-PP 64
           QRSHVP FGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYP++F+DNSH   P  P
Sbjct: 3   QRSHVPAFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMFADNSHEAPPVKP 62

Query: 65  SMPMPKDDPQTLKPTPTAHERRRSREDGASRQPYANSPGHRENPGRRQSGSEYSIDRSPL 124
           ++P PK         PT HE+++SRED     PYANSPGHRENP R+QSGSEYSIDRSPL
Sbjct: 63  NIPAPK---------PTTHEKKQSREDD-GYHPYANSPGHRENPSRKQSGSEYSIDRSPL 122

Query: 125 HRHAKPTGRESPVAEGKSLDGGHGNRGKTRMKPVLRDDAPEGTAVPKFGAWDVNNPASAD 184
           HRHAKP+GRESPV EGK LDGGHGNRGKTRMKP    DAPEGTAVPKFG+WDVNNPASAD
Sbjct: 123 HRHAKPSGRESPVVEGKGLDGGHGNRGKTRMKP----DAPEGTAVPKFGSWDVNNPASAD 182

Query: 185 GFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAKGCCFPWLRK 234
           GFTHIFGKVREE++GPGTPP  HSSSPYNNVHN++ D +AKG CFP LR+
Sbjct: 183 GFTHIFGKVREEKMGPGTPPPPHSSSPYNNVHNRRPDDSAKGGCFPCLRR 218

[Close]

BLAST of Moc09g00940 vs. NCBI nr
Match: XP_023547760.1 (RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.7 bits (927), Expect = 4.8e-96
Identity = 177/230 (76.96%), Postives = 194/230 (84.35%), Query Frame = 0


Query: 5   QRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDVFSDNSHSHEP-PP 64
           QRSHVP FGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYP++F+DNSH   P  P
Sbjct: 3   QRSHVPAFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMFADNSHEAPPVKP 62

Query: 65  SMPMPKDDPQTLKPTPTAHERRRSREDGASRQPYANSPGHRENPGRRQSGSEYSIDRSPL 124
           ++P PK         PT HE+++SRED     PYANSPGHRENP R+QSGSEYSIDRSPL
Sbjct: 63  TIPAPK---------PTTHEKKQSREDDGF-HPYANSPGHRENPSRKQSGSEYSIDRSPL 122

Query: 125 HRHAKPTGRESPVAEGKSLDGGHGNRGKTRMKPVLRDDAPEGTAVPKFGAWDVNNPASAD 184
           HRHAKP+GRESPV EGK  DGGHGNRGKTRMKP    DAPEGTAVPKFG+WDVNNPASAD
Sbjct: 123 HRHAKPSGRESPVVEGKGFDGGHGNRGKTRMKP----DAPEGTAVPKFGSWDVNNPASAD 182

Query: 185 GFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAKGCCFPWLRK 234
           GFTHIFGKVREE++GPGTPP  HSSSPYNNVHN++ D +AKG CFP LR+
Sbjct: 183 GFTHIFGKVREEKMGPGTPPPPHSSSPYNNVHNRRPDDSAKGGCFPCLRR 218

[Close]

BLAST of Moc09g00940 vs. NCBI nr
Match: XP_022953250.1 (RPM1-interacting protein 4-like [Cucurbita moschata] >XP_022991999.1 RPM1-interacting protein 4-like [Cucurbita maxima])

HSP 1 Score: 361.3 bits (926), Expect = 6.3e-96
Identity = 177/230 (76.96%), Postives = 194/230 (84.35%), Query Frame = 0


Query: 5   QRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDVFSDNSHSHEP-PP 64
           QRSHVP FGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYP++F+DNSH   P  P
Sbjct: 3   QRSHVPAFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMFADNSHEAPPVKP 62

Query: 65  SMPMPKDDPQTLKPTPTAHERRRSREDGASRQPYANSPGHRENPGRRQSGSEYSIDRSPL 124
           ++P PK         PT HE+++SRED     PYANSPGHRENP R+QSGSEYSIDRSPL
Sbjct: 63  NIPAPK---------PTTHEKKQSREDD-GYHPYANSPGHRENPSRKQSGSEYSIDRSPL 122

Query: 125 HRHAKPTGRESPVAEGKSLDGGHGNRGKTRMKPVLRDDAPEGTAVPKFGAWDVNNPASAD 184
           HRHAKP+GRESPV EGK  DGGHGNRGKTRMKP    DAPEGTAVPKFG+WDVNNPASAD
Sbjct: 123 HRHAKPSGRESPVVEGKGFDGGHGNRGKTRMKP----DAPEGTAVPKFGSWDVNNPASAD 182

Query: 185 GFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAKGCCFPWLRK 234
           GFTHIFGKVREE++GPGTPP  HSSSPYNNVHN++ D +AKG CFP LR+
Sbjct: 183 GFTHIFGKVREEKMGPGTPPPPHSSSPYNNVHNRRPDDSAKGGCFPCLRR 218

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BLAST of Moc09g00940 vs. NCBI nr
Match: XP_038896146.1 (RPM1-interacting protein 4 [Benincasa hispida])

HSP 1 Score: 350.1 bits (897), Expect = 1.4e-92
Identity = 173/229 (75.55%), Postives = 193/229 (84.28%), Query Frame = 0


Query: 5   QRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDVFSDNSHSHEPPPS 64
           QRSHVP FGNWE+EGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPD+  DN  SHE  P+
Sbjct: 3   QRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDILKDN--SHEAAPT 62

Query: 65  MPMPKDDPQTLKPTPTAHERRRSREDGASRQPYANSPGHRENPGRRQSGSEYSIDRSPLH 124
            P PKDD  T  P P  HERR SREDG  R PYANSPG+RENPGRRQSGSEYSIDRSPLH
Sbjct: 63  KPNPKDD--TTAPKPMTHERRHSREDGGFR-PYANSPGNRENPGRRQSGSEYSIDRSPLH 122

Query: 125 RHAKPTGRESPVAEGKSLDGGHGNRGKTRMKPVLRDDAPEGTAVPKFGAWDVNNPASADG 184
           R AKP+GR+SPV EGKS +GG+GNRGKTRMK     + PEGTAVPKFG+WDVNNPASADG
Sbjct: 123 RQAKPSGRDSPVTEGKSFEGGYGNRGKTRMKNDATPE-PEGTAVPKFGSWDVNNPASADG 182

Query: 185 FTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAKGCCFPWLRK 234
           FTHIFG+VR+E++GPGTPP  HSSSPYNNV+N++ + + KG CFP LR+
Sbjct: 183 FTHIFGEVRKEKLGPGTPPPQHSSSPYNNVNNRRPNDSVKGGCFPCLRR 225

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BLAST of Moc09g00940 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.6e-28
Identity = 91/230 (39.57%), Postives = 121/230 (52.61%), Query Frame = 0


Query: 6   RSHVPPFGNWENEGNVPYTVFFDKARKGRG-GGPIRNPNDPEEYPDVFSDNSHSHEPPPS 65
           RS+VP FGNWE E NVPYT +FDKARK R  G  I NPNDPE     ++ +S S + PP 
Sbjct: 3   RSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPE-----YNSDSQS-QAPPH 62

Query: 66  MPMPKDDPQTLKPTPTAHERRRSREDGASRQ----PYANSPGHRENPGRRQSGSEYSIDR 125
            P  +  P+ +     + E  RSRE+   +Q      +++    +  GR    + Y  ++
Sbjct: 63  PPSSRTKPEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYD-NK 122

Query: 126 SPLHRHAKPTGRESPVAEGKSLDGGHGNRGKTRMKP--VLRDDAPEG-TAVPKFGAWDVN 185
           SPLH++              S DG     GK+R KP  +  D++PE  T VPKFG WD N
Sbjct: 123 SPLHKN--------------SYDG----TGKSRPKPTNLRADESPEKVTVVPKFGDWDEN 182

Query: 186 NPASADGFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAKGCC 228
           NP+SADG+THIF KVREER        V  SS      + +  +N   CC
Sbjct: 183 NPSSADGYTHIFNKVREERSSGAN---VSGSSRTPTHQSSRNPNNTSSCC 204

[Close]

BLAST of Moc09g00940 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.8e-06
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 164 EGTAVPKFGAWDVNNPASADGFTHIFGKVREERIGPGTP 203
           +G  +PKFG WDVN+PASA+GFT IF K R+E+   G P
Sbjct: 4   KGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKP 42

[Close]

BLAST of Moc09g00940 vs. ExPASy TrEMBL
Match: A0A6J1CY94 (RPM1-interacting protein 4-like OS=Momordica charantia OX=3673 GN=LOC111015304 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.1e-135
Identity = 232/233 (99.57%), Postives = 232/233 (99.57%), Query Frame = 0


Query: 1   MAQQQRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDVFSDNSHSHE 60
           MAQQQRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDVFSDNSHSHE
Sbjct: 1   MAQQQRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDVFSDNSHSHE 60

Query: 61  PPPSMPMPKDDPQTLKPTPTAHERRRSREDGASRQPYANSPGHRENPGRRQSGSEYSIDR 120
           PPPSMPMPKDDPQTLKPTPTAHERRRSREDGASRQPYANSPGHRENPGRRQSGSEYSIDR
Sbjct: 61  PPPSMPMPKDDPQTLKPTPTAHERRRSREDGASRQPYANSPGHRENPGRRQSGSEYSIDR 120

Query: 121 SPLHRHAKPTGRESPVAEGKSLDGGHGNRGKTRMKPVLRDDAPEGTAVPKFGAWDVNNPA 180
           SPLHRHAKPTGRESPVAEGKSLDGGHGNRGKTRMKPVLRDDAPEGTAVPKFG WDVNNPA
Sbjct: 121 SPLHRHAKPTGRESPVAEGKSLDGGHGNRGKTRMKPVLRDDAPEGTAVPKFGXWDVNNPA 180

Query: 181 SADGFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAKGCCFPWLRK 234
           SADGFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAKGCCFPWLRK
Sbjct: 181 SADGFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAKGCCFPWLRK 233

[Close]

BLAST of Moc09g00940 vs. ExPASy TrEMBL
Match: A0A6J1JWD7 (RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111488479 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 3.0e-96
Identity = 177/230 (76.96%), Postives = 194/230 (84.35%), Query Frame = 0


Query: 5   QRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDVFSDNSHSHEP-PP 64
           QRSHVP FGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYP++F+DNSH   P  P
Sbjct: 3   QRSHVPAFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMFADNSHEAPPVKP 62

Query: 65  SMPMPKDDPQTLKPTPTAHERRRSREDGASRQPYANSPGHRENPGRRQSGSEYSIDRSPL 124
           ++P PK         PT HE+++SRED     PYANSPGHRENP R+QSGSEYSIDRSPL
Sbjct: 63  NIPAPK---------PTTHEKKQSREDD-GYHPYANSPGHRENPSRKQSGSEYSIDRSPL 122

Query: 125 HRHAKPTGRESPVAEGKSLDGGHGNRGKTRMKPVLRDDAPEGTAVPKFGAWDVNNPASAD 184
           HRHAKP+GRESPV EGK  DGGHGNRGKTRMKP    DAPEGTAVPKFG+WDVNNPASAD
Sbjct: 123 HRHAKPSGRESPVVEGKGFDGGHGNRGKTRMKP----DAPEGTAVPKFGSWDVNNPASAD 182

Query: 185 GFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAKGCCFPWLRK 234
           GFTHIFGKVREE++GPGTPP  HSSSPYNNVHN++ D +AKG CFP LR+
Sbjct: 183 GFTHIFGKVREEKMGPGTPPPPHSSSPYNNVHNRRPDDSAKGGCFPCLRR 218

[Close]

BLAST of Moc09g00940 vs. ExPASy TrEMBL
Match: A0A6J1GP44 (RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111455855 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 3.0e-96
Identity = 177/230 (76.96%), Postives = 194/230 (84.35%), Query Frame = 0


Query: 5   QRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDVFSDNSHSHEP-PP 64
           QRSHVP FGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYP++F+DNSH   P  P
Sbjct: 3   QRSHVPAFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPEMFADNSHEAPPVKP 62

Query: 65  SMPMPKDDPQTLKPTPTAHERRRSREDGASRQPYANSPGHRENPGRRQSGSEYSIDRSPL 124
           ++P PK         PT HE+++SRED     PYANSPGHRENP R+QSGSEYSIDRSPL
Sbjct: 63  NIPAPK---------PTTHEKKQSREDD-GYHPYANSPGHRENPSRKQSGSEYSIDRSPL 122

Query: 125 HRHAKPTGRESPVAEGKSLDGGHGNRGKTRMKPVLRDDAPEGTAVPKFGAWDVNNPASAD 184
           HRHAKP+GRESPV EGK  DGGHGNRGKTRMKP    DAPEGTAVPKFG+WDVNNPASAD
Sbjct: 123 HRHAKPSGRESPVVEGKGFDGGHGNRGKTRMKP----DAPEGTAVPKFGSWDVNNPASAD 182

Query: 185 GFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAKGCCFPWLRK 234
           GFTHIFGKVREE++GPGTPP  HSSSPYNNVHN++ D +AKG CFP LR+
Sbjct: 183 GFTHIFGKVREEKMGPGTPPPPHSSSPYNNVHNRRPDDSAKGGCFPCLRR 218

[Close]

BLAST of Moc09g00940 vs. ExPASy TrEMBL
Match: A0A1S3C6U9 (RPM1-interacting protein 4 OS=Cucumis melo OX=3656 GN=LOC103497569 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 1.0e-88
Identity = 170/230 (73.91%), Postives = 188/230 (81.74%), Query Frame = 0


Query: 5   QRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDVFSDNSHSHEPPPS 64
           QRSHVP FGNWE+EGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPD+  DN  SHE PPS
Sbjct: 3   QRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDILIDN--SHEAPPS 62

Query: 65  MPMPKDDPQTLKPTPTAHERRRSREDGASRQPYANSPGHRENPGRRQSGSEYSIDRSPLH 124
            P  KDD  T  P PT HERR SREDG  R PYANSPG+RENPGRRQSGS+YSIDRSPLH
Sbjct: 63  KPSLKDD--TPPPKPTTHERRHSREDGGFR-PYANSPGNRENPGRRQSGSDYSIDRSPLH 122

Query: 125 RHAKPTGRESPVAEGKSLDGGHGNRGKTRMKPVLRDDAPEGTAVPKFGAWDVNNPASADG 184
           R AKP+ R+S + EGKS +G + NRGKT+ K    +  PEGTAVPKFG+WDVNNPASADG
Sbjct: 123 RQAKPSARDSSMTEGKSFEGSYDNRGKTKTK---NNSPPEGTAVPKFGSWDVNNPASADG 182

Query: 185 FTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAK-GCCFPWLRK 234
           FTHIFGKVREER+GPGTPP  HSSSPYNN +N++ D + K G CFP LR+
Sbjct: 183 FTHIFGKVREERLGPGTPPPQHSSSPYNNANNRRPDDSVKGGGCFPCLRR 224

[Close]

BLAST of Moc09g00940 vs. ExPASy TrEMBL
Match: A0A0A0K570 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G343300 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 6.8e-88
Identity = 171/230 (74.35%), Postives = 189/230 (82.17%), Query Frame = 0


Query: 5   QRSHVPPFGNWENEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDVFSDNSHSHEPPPS 64
           QRSHVP FGNWE+EGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPD+F DN  SHE PPS
Sbjct: 3   QRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDIFMDN--SHEAPPS 62

Query: 65  MPMPKDDPQTLKPTPTAHERRRSREDGASRQPYANSPGHRENPGRRQSGSEYSIDRSPLH 124
            P PKDD  T  P PT HERR+SREDG  R PYANSPG+REN GRRQSGSEYSIDRSPLH
Sbjct: 63  KPSPKDD--TPPPKPTTHERRQSREDGGFR-PYANSPGNRENQGRRQSGSEYSIDRSPLH 122

Query: 125 RHAKPTGRESPVAEGKSLDGGHGNRGKTRMKPVLRDDAPEGTAVPKFGAWDVNNPASADG 184
           R AKP+ R+S + EGKS +G + NRGKT+ K    +  PEGTA+PKFG+WDVNNPASADG
Sbjct: 123 RQAKPSARDSSMTEGKSFEGNYDNRGKTKTK---NNSPPEGTALPKFGSWDVNNPASADG 182

Query: 185 FTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAK-GCCFPWLRK 234
           FTHIFGKVREER+GPGTP   HSSSPYNN +N + D +AK G CFP LR+
Sbjct: 183 FTHIFGKVREERLGPGTPQ--HSSSPYNNANNGRPDDSAKGGGCFPCLRR 222

[Close]

BLAST of Moc09g00940 vs. TAIR 10
Match: AT3G25070.1 (RPM1 interacting protein 4 )

HSP 1 Score: 127.1 bits (318), Expect = 1.8e-29
Identity = 91/230 (39.57%), Postives = 121/230 (52.61%), Query Frame = 0


Query: 6   RSHVPPFGNWENEGNVPYTVFFDKARKGRG-GGPIRNPNDPEEYPDVFSDNSHSHEPPPS 65
           RS+VP FGNWE E NVPYT +FDKARK R  G  I NPNDPE     ++ +S S + PP 
Sbjct: 3   RSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPE-----YNSDSQS-QAPPH 62

Query: 66  MPMPKDDPQTLKPTPTAHERRRSREDGASRQ----PYANSPGHRENPGRRQSGSEYSIDR 125
            P  +  P+ +     + E  RSRE+   +Q      +++    +  GR    + Y  ++
Sbjct: 63  PPSSRTKPEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYD-NK 122

Query: 126 SPLHRHAKPTGRESPVAEGKSLDGGHGNRGKTRMKP--VLRDDAPEG-TAVPKFGAWDVN 185
           SPLH++              S DG     GK+R KP  +  D++PE  T VPKFG WD N
Sbjct: 123 SPLHKN--------------SYDG----TGKSRPKPTNLRADESPEKVTVVPKFGDWDEN 182

Query: 186 NPASADGFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDHNAKGCC 228
           NP+SADG+THIF KVREER        V  SS      + +  +N   CC
Sbjct: 183 NPSSADGYTHIFNKVREERSSGAN---VSGSSRTPTHQSSRNPNNTSSCC 204

[Close]

BLAST of Moc09g00940 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 56.6 bits (135), Expect = 3.1e-08
Identity = 29/68 (42.65%), Postives = 38/68 (55.88%), Query Frame = 0


Query: 162 APEGTAVPKFGAWDVNNPASADGFTHIFGKVREERIGPGTPPVVHSSSPYNNVHNQKTDH 221
           A +G  +PKFG WDVN+P+SA+GFT IF K R E+ G G         P  N + +  + 
Sbjct: 2   ADKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKNGEVLEK 61

Query: 222 NAKG--CC 228
            AK   CC
Sbjct: 62  PAKKWFCC 69

[Close]

BLAST of Moc09g00940 vs. TAIR 10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-07
Identity = 32/75 (42.67%), Postives = 41/75 (54.67%), Query Frame = 0


Query: 164 EGTAVPKFGAWDVNNPASADGFTHIFGKVREER-------IGPGT--PPVVHSSSPYNNV 223
           +G  +PKFG WDVNNPASA+GFT IF K  +E+        GP +   P  + +S  NN 
Sbjct: 5   KGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASGAGPNSLVSPQRNQNSDQNNN 64

Query: 224 H-NQKTDHNAKGCCF 229
           H +Q      K  CF
Sbjct: 65  HSSQNPKAKNKWFCF 79

[Close]

BLAST of Moc09g00940 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-07
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 164 EGTAVPKFGAWDVNNPASADGFTHIFGKVREERIGPGTP 203
           +G  +PKFG WDVN+PASA+GFT IF K R+E+   G P
Sbjct: 4   KGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKP 42

[Close]

BLAST of Moc09g00940 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-07
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 164 EGTAVPKFGAWDVNNPASADGFTHIFGKVREERIGPGTP 203
           +G  +PKFG WDVN+PASA+GFT IF K R+E+   G P
Sbjct: 20  KGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKP 58

The following BLAST results are available for this feature:

BLAST of Moc09g00940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145992.1	2.3e-135	99.57	RPM1-interacting protein 4-like [Momordica charantia]	[more]
KAG6575990.1	2.1e-96	77.39	RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023547760.1	4.8e-96	76.96	RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022953250.1	6.3e-96	76.96	RPM1-interacting protein 4-like [Cucurbita moschata] >XP_022991999.1 RPM1-intera...	[more]
XP_038896146.1	1.4e-92	75.55	RPM1-interacting protein 4 [Benincasa hispida]	[more]

BLAST of Moc09g00940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYN5	2.6e-28	39.57	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]
O22633	2.8e-06	58.97	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]

BLAST of Moc09g00940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CY94	1.1e-135	99.57	RPM1-interacting protein 4-like OS=Momordica charantia OX=3673 GN=LOC111015304 P...	[more]
A0A6J1JWD7	3.0e-96	76.96	RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111488479 PE=4...	[more]
A0A6J1GP44	3.0e-96	76.96	RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111455855 PE...	[more]
A0A1S3C6U9	1.0e-88	73.91	RPM1-interacting protein 4 OS=Cucumis melo OX=3656 GN=LOC103497569 PE=4 SV=1	[more]
A0A0A0K570	6.8e-88	74.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G343300 PE=4 SV=1	[more]

BLAST of Moc09g00940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25070.1	1.8e-29	39.57	RPM1 interacting protein 4	[more]
AT2G04410.1	3.1e-08	42.65	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G63270.1	1.2e-07	42.67	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.1	2.0e-07	58.97	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	2.0e-07	58.97	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 164..196 e-value: 2.9E-19 score: 68.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..160
None	No IPR available	PANTHER	PTHR33159:SF44	RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED	coord: 4..230
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 4..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g00940.1	Moc09g00940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane