Moc09g00540 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g00540
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Locationchr9: 561406 .. 568606 (+)
RNA-Seq ExpressionMoc09g00540
SyntenyMoc09g00540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATAGTCGAAGAAACAGAGTGCATGCCAAGGAGGCAGCACCGCAGTGTTGCACAACGCCTTAGCGCTAAGGACGGCATCGTGGTGCTGTCAGGAAGGCGGGCGCACCGATTTAATTCTACCCGTAATGCCATGACGCTGTAACAATGTTTTATAAATAAGCAGTTTCGATTTAAGGTTTTTTGAGCCGTTCAAAGTCGTTTTGAGAGCAGTTTTGTGGCAGGTTTCAGACAGAGGCTCTCGGTATTGGCAGCATTGAGGCATATCAAGATCGATATATTCAGGGTGAATATGTGTGGGAGATATTTGAGTGTTTGTATCCAATCTCATATTAGTGAAACCTACATCTGAGCGGAAGACTGGACGTAGTCATTATTACACGAACCAGTATGAAATACTTTGTATTGTTATTATTGTATTGTTATTACTTTCACTTTTAATCTCTTTTTGTTTGAAAGGGAAATTGGAGTGCCTAATTTTCCAACAGTTGGTTATGTTCTTCAATCGCTAATAATATCTCTTTTCAAATTTAATAATTTCCCTTATATTTTCATTTTCATGGGCATCTCTCTCTCCAAAAAGGTACAAATTCCTCATCTAGTGTGCTGCACACCGAAGCCTTAATACAGCTGACGGATTACAATCTCGTATGAAATCCCTCCACCGTAACCCAAATTGGTACATTCTTTGTAAAAGGAGCAATGAAACACTAGATCACCTACTTTTGCATTGTGCTTTCCCGAAAAAAATTTGGAATCGCCTCTTTGCTATCTTCGGATTACCCCTATCTCGCTGCCCAGGAATGTTGTGGATTTCATAACAAAAGTGCTTTTTAGCCTCTCCAATTCAAGGCGTTCTATACTGTGTTGCAATGCTATAGGTTCGGTCTTATGGCACCTTTGGTTGGAGCGTAGCAACCGTGTCTCAGTGACAAAAATAAGTTGCTTAATCATCTATGGGAAGACATAAAGAGTTGCAACTTCTTCGTCATGGTCCTCTGAATCAAAGAGATTACAATATTCCCACCATCTTTTTAATTTGGGAAGCATTCTTATAATTTCTTATTGTATCTTCCATCTCACTTTGGAAAGCCTCCCTATTGCTATCTTAATGAATGATTGGTATCTTAAAAAAAACATAAATTTTATTTAAGACCAAGAACTCACACATAAAATCAATCTTTAAATCACCTGCAAATTTTTTATTTTATTTTTTGATATTCATGCGTATCGTCCATACTAGATTACGCACATTTCGACTAATCTTACAGGACAGTCATTTGACCCAACAAACAATATTTGGTGCCGAAAAATGTTAAGTATCCTATATGGGACATAACAAGGGTCTCATGAACATTAATATAGGATCCGATGGTCATCATGAGGTTTGAGTTCATTCTGGCCATCTCAATTTATGGAGCTCCTTTGGACCAATGAGACTAGTTTTTTTTAGTGCAACATGTGGGGACGAGGATCGAACTCACACCCTCTTAGTTTGAGATATATACCAATTACCGCTGAATTATGTAGTTAACATATGAGTTCATTTATTTCAAATTAAACTATTGAATATGCTAATCCCATGAGCCACAAACCCAAAGGGAAAGATAGTGAACCCAAGAGCAATTTCCTTTCGGTTATTATATATATAATAACCGAAGATTTGAGATTCAAACTCTTAATCTTTTGATCGGAGATATGTGCTTAAACCAGTTGAGTTATGCTCAGGTTGGTGTTAGGATTATTAGTGGTGCCAAATCGACATCGGAAAGAGTCGGGACGAAGCAGGAATGAAAATAGTCGAAGAAACAAGCTAGGGTTGGGAGAAAATTAAACCCTCACGGCTTTGCTTTTGGTTTCACAAAAATGTCTCATCTATATACCATGGATCAACTCTTTTATGCTCAAAGTGGAGAAGATCATACCATTGTACAAATAATTTGGGGTACTATTGGGGGTATTTGGTATCATTATCCTTTACAAGTGATATCAGAGTCATATGATAAAAAACCTAGCCTTGTGGGAGAAATCATCGGTGACCGAACAAGAGTGATGAATGAGCCTTATAGTCATTACATAATTGTGGATGAGGGTGCGATAGTGGTCGACACCAGGTTCCCACAGTGTGATCCGTGTGTGAGAATCCTCAGGTGTCAAACAAATAAGTCTGGTGAATCTCGAAAGATGTAGGCATGGTGTGGTTGAACTCTATCAGAAGCGGACATGTAGTGTGCTCCAAAGAAGAGGACTTGGCCTATATACGAGTTGGAGGGATGGATGATTACTTGAGGAGAGACTCCATGGTAATTTGTTCGAGGGGAGTATTGTAGACGGATGAATGACCTATTCTAACAAAATACAAGTTGTACTTTGTTTTAGGAGATGATTGCTAAGGTTGCAATGAGTGCAAAAAAAGTCTCATATTAGTTAAGGAAGAGATTCATCTATGGTATATAGATGATACCTTTTGGGTGAAATCAAAACCAAAACTATGAGAGTTATACCTAAACACTGCTACAAAACTGTGTGGCTATGACAGTTATGAACAGTAAAAAAGTTTGGAAAAAAATATGTCGCAAATTGTCAGATGCGTTTTTTGCAGGAAAAAAATGTCACTTTCTGAATTTTAATATTTTATGATAGTTAAAATTGTCAGGAATATTTTTTTATTCAATGACATTGAAAAATTATTAAAAAATGGCGAAGGTATGATTTTAGCGAGAAAAAACACTAATTTTTGGATTTTTAAAAAATTTGTGGTGGTTAAAAAACTGTCACGAAAACTAAAAAATTTTAATTTTATTCATGGCAGTTAATTTTTCTTTTGAGTTACTATAATTCAATATTTTCTCTTACGGTCTCTTGGTGTCAAGAATCTTCTATAAATGATTTAAAATTTTTTATCTTTTTTAGAGCGAGAATAACTTAAAATGAATATAGTTAAATTTATTTATTTGGGAGTTGTTGGAAAACAAAAAAAATAAAATAGAAAATTTATTGATTTGAGCTTTTAATCTAAATTTATTAATTAGAAATTAAAATAAGACAAGATAATAAGTCATTTACTTTAAAATTCAATAAAATTCTTAAAATCTAACCATTTTGATCAGTAAAAATACAATTTGCTTGGGTTACTTCAATATAATATGATCAAACAAACCATTAATCTTCATTAAATTGTGGAGATACTTGGAGCAGTACAAATCTGTTGTCCTTAAACATTTGTCCATCCAAGTTAACATATAAAATTTTTGTATTCATTAATTAGAATGCATCTATAAGTATTATTTTTGTTTCCAACACTTTTCTTGGTAACTTGATGTCAAATATATATCCCCAATGCAAAGATAAGAACACGAGCAATTTCTTTTCAATTATTATACATGCTTTCGAGATAGACAGACACATTTTATGGACTGATAAAATTTCACTTCGAAAATATTAGTTTTATGTTTCTACCTTTAACCACATATTTAGTTACAATGGTTTAAATCAAAGTTGTTCATGATAAACAACAAAATAATACACCAGTAAAATACAACAAGCTAGCAACACACCACAAGAATATATTAATACCTCAGCAAGTGATATTTCTTCTTTGCAAAACCGTTCATGGTATCAGAGCTTGCACGTAGGCTATCTTCAACGTCAACTTTCTGCTATTGTCTCATTTGATCTTGGTTCAAAATTCATCTACAATAATCCTGCTGTTGTAATTTCTCATGGCGAACAACGAGACTGCACTTACAATCCAACCTTTTCACCAATGTTCCAGCTTAATTTCCATAAATCTAAATACCACCAATTATCTACTGTGGAAGTCACAAGTCCTCCCTCTAGTGAGAATCCTAGGAGTTGAGTAACATTTACTTACTAACAGCACCCAAGATGCAAATTCTATCAACAAAGAAGGTGCCTCAACGGTCAATCTTCAATATCAAACCTGGCTCAATAATGATGGCATTTTAACATCATGATTATTAGGAATCATTAGTGAGGAAGTTTTAGCAATGATTGAAAGATTAGACACTGCTCATCAAGTCTGGAAATCCGTGAAAGAAACTCTTTTGGGAATTACAAAGGAAAATGAAATTAATATAAGTGAAACACTTCACTGTCTTTGAAAGGTGATCTACCATTAGAAGAGTACATCAAAAGGTTCAAAGCGTTGGCTGACAAATTGGCAGCCATGAAAAAGCCTCTTGATGACCCAAGTAAGGTGTTCACTGTAGCTCGAGGACTGGGAAACAAGTACAAAGAATTCAGAACTGCAATGTTGTCCAAGACTGCCTATCCTACATTCAATCAGTTTGTTCTCTCTTTAAAAGCTCATGAACAGTTGAACCTTCTTGAAGAAGAAGGAAAAGCTTTGGTTCCCAATATAAACCAAGCTTTTTATAGTCAAAGAGGAGGAAGAAGCAGTGGAAGATGGCACCATCAATCGTTATAAAGCACGATTAGTAGCCTAAGGCTACTCTCAAATATAAGGACTCGACTATGGAGAAACCTATAGCCCTGTAATTAAACCTACTACAATAAGACTAATTCTATCCCTAGCGACTAGTTTAAGTTGGCCCATACGACAATTAGATGTTAAAAACGCTTTTCTCTATGGTCACCTTAAAGAAAAGGTTTATATGGCACAACCCTGCGGTTTTGTGGATCCAAGTACTCATGTATGTAAGTTGAAAAAATCTATTTATGGGTTAAAACAAGCCCCTAGAGCTTGGTTTGATAGATTGGCTAACTTTCTTCTCCATATAGGATTTGCTTGCAGTAGGTCAGACCCCTCCTTATTTATCTTGAAAAAGGACTCTACTCTAACGTGCTTATGTTAATTTATGTTGACGACATTATTCTTACAGGGAATGATATTTCTCACTTTCAACCGTTAATACAAACACTAAGCGGTGAGTTTGCATTAAAAGATATCTTGGAGCCCTACATTACTTCCTTGGAATTAAAGTCAAGCTTACTCATAAAGGAATCACATTATGCCAAGGAAGATATGTCGTGACCTTCTTTACAACTCCAAGATGCTTTGTGCATCCTCCATATGCACACCAATGGCTGTATCAACACAAGCCCTGCCCAATGATGAGCAACCCACAGATGTCAAACACTGTAGAAGCTTAGTAGGATCTCTTCAATACCTCACTCTCACTCGTCCTTACATCGTACAAGCTATGAATAAATTGTGCCAATGACTCCAAAATCCCACCATAGCAGACCTCAAAGTTGTGAAGCGAATCCTACGATACATTCAAGGAACGGTAGATCATGGTTTTACCTTTTATAAACATAGCACAACTAACTTATATGGTTTTTGTGATGCAGATTAGGGAGGTTGTCCTCTAACAAGACGGAGTACTACTGGCTATTGTATATTTCTTGGTTCAAACTGCATCTCATGGTTTTTCAAGAAACAATCGACCATCGCTCGTTCAAGTTCTGAATCAGAATATCGAGCAATGGCAAGTGCAACTGCCGAACTGACATGGATTGGCTTCATCCTTCGCGGCATTGGCATCGCAATACTTAAAACATCTCAACTATATTGTGACAACATGAGTGCTCTCTACATGTCAGTAAACAACGTGTTCCGCGCTAGGACCAAACACATTGAGATGGATTATCATTTTGTTCGCGAGAAGGTTGCTCTCGGCTCTCTCATCACCAAGTTCATTTCATCCAAACAACAAATAGCTGACATCCTCACGAAACCCCTCGCTAAAGCTGTTTTTAAAGACTTAAGGAGCAAACTCGGCGTTCGTTCAACTACTACCTTGAGTTTGAGAGACGATGATAAACAACAAAATAACACACCAGTAAAATACAACATAATAACACACCACCAGAATATATTAACATCTCAGCGAGTGATATTTCAAAATAGCAGCTCTACAGGTCCTTGATTGGCATCATTCTATGATCAACATATTCTCCTTCCTTATTTGGTGAAGATTTTCAGCAATCTACGACAACTCATTTACTCAGCGATATCCCATAATTGTTGGCCTTTATTCATTTCTTATTAACGCTACCTTCTCCTTACATATTTTATTTTTCCTTTCTTACTTTAGTTAAGTTCAATGGTAGTCTTTCATGTGTCTATCTTGGATTTAACTGGTAAAATATTTTTTCACAAAAACTAAGAATAATACATCATCTGTTTCATCTTTCTTTCCATTCTATTCCTCCAAGCCATTCTTTCAAGCTAAGTTTTATAAATTAGAGTTAATGGCAGAGCCAGAAGTTTTGTTATCGATGGAGGAGCTCTTAAATTATGATGTTTCTTAACATATGTAACCCTTCTATTTAAAATAATTAGGGAGCAGAAAACTAGAAAGATGATTAAAATACTCATTATATTGTATAATTTGTGCAAATTACAAAAACCACCCTAAATTGTAGTGATGGTTGCAATTGCACCCTTAAAATTTTTAATTGTAAAAATTAGACGACCCTCCATCTTTTTTTTTAATGAAAACATTAATTAGACCTACTGTTGTTATTTCATTTGGCACGAGACTAGTCACATTCATCGATAAATATAATTCTATAATAACAACTGGAAACGCAAATATAGTCCACTCCGTTTTCTAACACCATGTCACTTCATTAGAGTCTTATATAAATTTTTCTTCGAACATTCTTTGTTCCTACAAGTTTAGATAGTAACAGCTAAAGAGAGCATAACTCACCGATAATTGACATATATCTCAAACAAAGAAGTTGTGATCAGTTTGATCTCCCGTCTCTCCAAAAAAAAAAGGAAAAAAGTTTAGAAAATAACAAAAATCACTTTAATAGAACTCACTCATTTTTTAACAACACCACAATCTAAATCAAATATCTTAGGGGTATGATGACAATCGTAAATTTGTTTCACTATAAAGTGTTCAAGAACAATCTCCCATTTATATATTTCTTTCCCTCACAAACTTCTCCTTTTGTAACTAATTAATAATAAAATATTTCTAAGTTTGTGGTACATATTATTGCATGAAGAAAAAGAAAAAGACTCATGGTTTCTTGGTGGCGTGCAGTTGAGAATGCCCCCAATGGCCATTAGTTTTGCACCCATCATGCCAGGAAGATCAACAGTCATGAAGTTTTCAGTTCTTATTGAAATTGTCTCAATAGAACCTTCTTTAATGAACATGGTTCTCGAAGTTGCGATGATTGTACGAGGATAA

mRNA sequence

ATGAAAATAGTCGAAGAAACAGAGTGCATGCCAAGGAGGCAGCACCGCAGTGTTGCACAACGCCTTAGCGCTAAGGACGGCATCGTGGTGCTGTCAGGAAGGCGGGCGCACCGATTTAATTCTACCCGTAATGCCATGACGCTGTTTCAGACAGAGGCTCTCGGTATTGGCAGCATTGAGGCATATCAAGATCGATATATTCAGGAGTCATATGATAAAAAACCTAGCCTTGTGGGAGAAATCATCGGTGACCGAACAAGAGTGATGAATGAGCCTTATAGTCATTACATAATTGTGGATGAGGGTGCGATAGTGGTCGACACCAGAAGCGGACATGTAGTGTGCTCCAAAGAAGAGGACTTGGCCTATATACGAGTTGGAGGGATGGATGATTACTTGAGGAGAGACTCCATGAGCTTGCACGTAGGCTATCTTCAACGTCAACTTTCTGCTATTGTCTCATTTGATCTTGGTTCAAAATTCATCTACAATAATCCTGCTGTTGTAATTTCTCATGGCGAACAACGAGACTGCACTTACAATCCAACCTTTTCACCAATGTTCCAGCTTAATTTCCATAAATCTAAATACCACCAATTATCTACTGTGGAAGTCACAAGTCCTCCCTCTAGTGATCTACCATTAGAAGAGTACATCAAAAGGTTCAAAGCGTTGGCTGACAAATTGGCAGCCATGAAAAAGCCTCTTGATGACCCAAGTAAGGTGTTCACTGTAGCTCGAGGACTGGGAAACAAGTACAAAGAATTCAGAACTGCAATGTTGTCCAAGACTGCCTATCCTACATTCAATCAGTTTGTTCTCTCTTTAAAAGCTCATGAACAGTTGAACCTTCTTGAAGAAGAAGGAAAAGCTTTGTTGAGAATGCCCCCAATGGCCATTAGTTTTGCACCCATCATGCCAGGAAGATCAACAGTCATGAAGTTTTCAGTTCTTATTGAAATTGTCTCAATAGAACCTTCTTTAATGAACATGGTTCTCGAAGTTGCGATGATTGTACGAGGATAA

Coding sequence (CDS)

ATGAAAATAGTCGAAGAAACAGAGTGCATGCCAAGGAGGCAGCACCGCAGTGTTGCACAACGCCTTAGCGCTAAGGACGGCATCGTGGTGCTGTCAGGAAGGCGGGCGCACCGATTTAATTCTACCCGTAATGCCATGACGCTGTTTCAGACAGAGGCTCTCGGTATTGGCAGCATTGAGGCATATCAAGATCGATATATTCAGGAGTCATATGATAAAAAACCTAGCCTTGTGGGAGAAATCATCGGTGACCGAACAAGAGTGATGAATGAGCCTTATAGTCATTACATAATTGTGGATGAGGGTGCGATAGTGGTCGACACCAGAAGCGGACATGTAGTGTGCTCCAAAGAAGAGGACTTGGCCTATATACGAGTTGGAGGGATGGATGATTACTTGAGGAGAGACTCCATGAGCTTGCACGTAGGCTATCTTCAACGTCAACTTTCTGCTATTGTCTCATTTGATCTTGGTTCAAAATTCATCTACAATAATCCTGCTGTTGTAATTTCTCATGGCGAACAACGAGACTGCACTTACAATCCAACCTTTTCACCAATGTTCCAGCTTAATTTCCATAAATCTAAATACCACCAATTATCTACTGTGGAAGTCACAAGTCCTCCCTCTAGTGATCTACCATTAGAAGAGTACATCAAAAGGTTCAAAGCGTTGGCTGACAAATTGGCAGCCATGAAAAAGCCTCTTGATGACCCAAGTAAGGTGTTCACTGTAGCTCGAGGACTGGGAAACAAGTACAAAGAATTCAGAACTGCAATGTTGTCCAAGACTGCCTATCCTACATTCAATCAGTTTGTTCTCTCTTTAAAAGCTCATGAACAGTTGAACCTTCTTGAAGAAGAAGGAAAAGCTTTGTTGAGAATGCCCCCAATGGCCATTAGTTTTGCACCCATCATGCCAGGAAGATCAACAGTCATGAAGTTTTCAGTTCTTATTGAAATTGTCTCAATAGAACCTTCTTTAATGAACATGGTTCTCGAAGTTGCGATGATTGTACGAGGATAA

Protein sequence

MKIVEETECMPRRQHRSVAQRLSAKDGIVVLSGRRAHRFNSTRNAMTLFQTEALGIGSIEAYQDRYIQESYDKKPSLVGEIIGDRTRVMNEPYSHYIIVDEGAIVVDTRSGHVVCSKEEDLAYIRVGGMDDYLRRDSMSLHVGYLQRQLSAIVSFDLGSKFIYNNPAVVISHGEQRDCTYNPTFSPMFQLNFHKSKYHQLSTVEVTSPPSSDLPLEEYIKRFKALADKLAAMKKPLDDPSKVFTVARGLGNKYKEFRTAMLSKTAYPTFNQFVLSLKAHEQLNLLEEEGKALLRMPPMAISFAPIMPGRSTVMKFSVLIEIVSIEPSLMNMVLEVAMIVRG
Homology
[Close]
BLAST of Moc09g00540 vs. NCBI nr
Match: XP_022154021.1 (uncharacterized protein LOC111021379 [Momordica charantia] >XP_022154022.1 uncharacterized protein LOC111021379 [Momordica charantia])

HSP 1 Score: 105.9 bits (263), Expect = 6.9e-19
Identity = 51/79 (64.56%), Postives = 65/79 (82.28%), Query Frame = 0 

Query: 213 LPLEEYIKRFKALADKLAAMKKPLDDPSKVFTVARGLGNKYKEFRTAMLSKTAYPTFNQF 272
           L ++EYI++FK L D+L AMKKPLDD +KVF +ARGLG KYK+FRTAMLSK  YP++NQF
Sbjct: 138 LSMDEYIRKFKNLCDRLXAMKKPLDDLTKVFHLARGLGIKYKDFRTAMLSKAPYPSYNQF 197

Query: 273 VLSLKAHEQLNLLEEEGKA 292
           VL+LKAH+Q    EEE ++
Sbjct: 198 VLALKAHDQFLTDEEEERS 216

[Close]
BLAST of Moc09g00540 vs. NCBI nr
Match: PNX82907.1 (hypothetical protein L195_g038944, partial [Trifolium pratense])

HSP 1 Score: 97.1 bits (240), Expect = 3.2e-16
Identity = 46/76 (60.53%), Postives = 61/76 (80.26%), Query Frame = 0 

Query: 213 LPLEEYIKRFKALADKLAAMKKPLDDPSKVFTVARGLGNKYKEFRTAMLSKTAYPTFNQF 272
           L L+EYI++FK + DKLAA+ KPL D  KVF V++GLGNKYK+FR A+LSK  YP+FNQF
Sbjct: 62  LSLDEYIRKFKEICDKLAAIGKPLSDVDKVFQVSKGLGNKYKDFRIAVLSKPPYPSFNQF 121

Query: 273 VLSLKAHEQLNLLEEE 289
           ++SL+  EQ+ L EE+
Sbjct: 122 IMSLQNFEQVYLEEEK 137

[Close]
BLAST of Moc09g00540 vs. NCBI nr
Match: PNX56937.1 (hypothetical protein L195_g050142, partial [Trifolium pratense])

HSP 1 Score: 95.9 bits (237), Expect = 7.2e-16
Identity = 45/76 (59.21%), Postives = 60/76 (78.95%), Query Frame = 0 

Query: 213 LPLEEYIKRFKALADKLAAMKKPLDDPSKVFTVARGLGNKYKEFRTAMLSKTAYPTFNQF 272
           L LEEYI++FK + DKLAA+ KPL D  KVF +++GLGNKYKEF+ A+LSK  YP F+QF
Sbjct: 49  LSLEEYIRKFKEICDKLAAIGKPLSDVDKVFQISKGLGNKYKEFKIAVLSKPPYPLFHQF 108

Query: 273 VLSLKAHEQLNLLEEE 289
           ++SL+  EQ+ L EE+
Sbjct: 109 IMSLQNFEQVYLAEEK 124

[Close]
BLAST of Moc09g00540 vs. NCBI nr
Match: GAU44375.1 (hypothetical protein TSUD_243070 [Trifolium subterraneum])

HSP 1 Score: 95.5 bits (236), Expect = 9.4e-16
Identity = 44/77 (57.14%), Postives = 61/77 (79.22%), Query Frame = 0 

Query: 212 DLPLEEYIKRFKALADKLAAMKKPLDDPSKVFTVARGLGNKYKEFRTAMLSKTAYPTFNQ 271
           +L L+EYI++FK L DKL A+ KP+ D  KVF +++GLG+KYKEFR A+LSK  YP+FNQ
Sbjct: 146 NLSLDEYIRKFKELCDKLTAIGKPVSDVDKVFQISKGLGHKYKEFRIAVLSKPPYPSFNQ 205

Query: 272 FVLSLKAHEQLNLLEEE 289
           F++SL+  EQ+ L EE+
Sbjct: 206 FIMSLQNFEQVYLTEEK 222

[Close]
BLAST of Moc09g00540 vs. NCBI nr
Match: RVX10186.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])

HSP 1 Score: 94.0 bits (232), Expect = 2.7e-15
Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 0 

Query: 201 STVEVTSP--PSSDLPLEEYIKRFKALADKLAAMKKPLDDPSKVFTVARGLGNKYKEFRT 260
           ST++  +P    S   L+EY++ FK + D LAA +KP+ D  KVF +A+GLG KY +FR 
Sbjct: 112 STIDQQTPRGKESTRSLDEYLREFKGICDALAAFRKPVSDLDKVFQLAQGLGTKYMDFRV 171

Query: 261 AMLSKTAYPTFNQFVLSLKAHEQLNLLEEE 289
           AMLSK  YP++NQFVL+L+ HEQ+ + E E
Sbjct: 172 AMLSKPPYPSYNQFVLALQGHEQMIMTENE 201

[Close]
BLAST of Moc09g00540 vs. ExPASy TrEMBL
Match: A0A6J1DMG5 (uncharacterized protein LOC111021379 OS=Momordica charantia OX=3673 GN=LOC111021379 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.4e-19
Identity = 51/79 (64.56%), Postives = 65/79 (82.28%), Query Frame = 0 

Query: 213 LPLEEYIKRFKALADKLAAMKKPLDDPSKVFTVARGLGNKYKEFRTAMLSKTAYPTFNQF 272
           L ++EYI++FK L D+L AMKKPLDD +KVF +ARGLG KYK+FRTAMLSK  YP++NQF
Sbjct: 138 LSMDEYIRKFKNLCDRLXAMKKPLDDLTKVFHLARGLGIKYKDFRTAMLSKAPYPSYNQF 197

Query: 273 VLSLKAHEQLNLLEEEGKA 292
           VL+LKAH+Q    EEE ++
Sbjct: 198 VLALKAHDQFLTDEEEERS 216

[Close]
BLAST of Moc09g00540 vs. ExPASy TrEMBL
Match: A0A2K3LWK7 (Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g038944 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-16
Identity = 46/76 (60.53%), Postives = 61/76 (80.26%), Query Frame = 0 

Query: 213 LPLEEYIKRFKALADKLAAMKKPLDDPSKVFTVARGLGNKYKEFRTAMLSKTAYPTFNQF 272
           L L+EYI++FK + DKLAA+ KPL D  KVF V++GLGNKYK+FR A+LSK  YP+FNQF
Sbjct: 62  LSLDEYIRKFKEICDKLAAIGKPLSDVDKVFQVSKGLGNKYKDFRIAVLSKPPYPSFNQF 121

Query: 273 VLSLKAHEQLNLLEEE 289
           ++SL+  EQ+ L EE+
Sbjct: 122 IMSLQNFEQVYLEEEK 137

[Close]
BLAST of Moc09g00540 vs. ExPASy TrEMBL
Match: A0A2K3JSC9 (Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g050142 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.5e-16
Identity = 45/76 (59.21%), Postives = 60/76 (78.95%), Query Frame = 0 

Query: 213 LPLEEYIKRFKALADKLAAMKKPLDDPSKVFTVARGLGNKYKEFRTAMLSKTAYPTFNQF 272
           L LEEYI++FK + DKLAA+ KPL D  KVF +++GLGNKYKEF+ A+LSK  YP F+QF
Sbjct: 49  LSLEEYIRKFKEICDKLAAIGKPLSDVDKVFQISKGLGNKYKEFKIAVLSKPPYPLFHQF 108

Query: 273 VLSLKAHEQLNLLEEE 289
           ++SL+  EQ+ L EE+
Sbjct: 109 IMSLQNFEQVYLAEEK 124

[Close]
BLAST of Moc09g00540 vs. ExPASy TrEMBL
Match: A0A2Z6P7T0 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_243070 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.5e-16
Identity = 44/77 (57.14%), Postives = 61/77 (79.22%), Query Frame = 0 

Query: 212 DLPLEEYIKRFKALADKLAAMKKPLDDPSKVFTVARGLGNKYKEFRTAMLSKTAYPTFNQ 271
           +L L+EYI++FK L DKL A+ KP+ D  KVF +++GLG+KYKEFR A+LSK  YP+FNQ
Sbjct: 146 NLSLDEYIRKFKELCDKLTAIGKPVSDVDKVFQISKGLGHKYKEFRIAVLSKPPYPSFNQ 205

Query: 272 FVLSLKAHEQLNLLEEE 289
           F++SL+  EQ+ L EE+
Sbjct: 206 FIMSLQNFEQVYLTEEK 222

[Close]
BLAST of Moc09g00540 vs. ExPASy TrEMBL
Match: A0A438JMJ0 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_643 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-15
Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 0 

Query: 201 STVEVTSP--PSSDLPLEEYIKRFKALADKLAAMKKPLDDPSKVFTVARGLGNKYKEFRT 260
           ST++  +P    S   L+EY++ FK + D LAA +KP+ D  KVF +A+GLG KY +FR 
Sbjct: 112 STIDQQTPRGKESTRSLDEYLREFKGICDALAAFRKPVSDLDKVFQLAQGLGTKYMDFRV 171

Query: 261 AMLSKTAYPTFNQFVLSLKAHEQLNLLEEE 289
           AMLSK  YP++NQFVL+L+ HEQ+ + E E
Sbjct: 172 AMLSKPPYPSYNQFVLALQGHEQMIMTENE 201

The following BLAST results are available for this feature:
BLAST of Moc09g00540 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022154021.16.9e-1964.56uncharacterized protein LOC111021379 [Momordica charantia] >XP_022154022.1 uncha... [more]
PNX82907.13.2e-1660.53hypothetical protein L195_g038944, partial [Trifolium pratense][more]
PNX56937.17.2e-1659.21hypothetical protein L195_g050142, partial [Trifolium pratense][more]
GAU44375.19.4e-1657.14hypothetical protein TSUD_243070 [Trifolium subterraneum][more]
RVX10186.12.7e-1550.00Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera][more]
BLAST of Moc09g00540 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc09g00540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DMG53.4e-1964.56uncharacterized protein LOC111021379 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A2K3LWK71.6e-1660.53Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g03894... [more]
A0A2K3JSC93.5e-1659.21Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g05014... [more]
A0A2Z6P7T04.5e-1657.14Reverse transcriptase Ty1/copia-type domain-containing protein OS=Trifolium subt... [more]
A0A438JMJ01.3e-1550.00Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... [more]
BLAST of Moc09g00540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 214..281
e-value: 5.3E-8
score: 32.7
NoneNo IPR availablePANTHERPTHR47481FAMILY NOT NAMEDcoord: 206..287
NoneNo IPR availablePANTHERPTHR47481:SF2SUBFAMILY NOT NAMEDcoord: 206..287

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g00540.1Moc09g00540.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0019538 protein metabolic process
biological_process GO:0050789 regulation of biological process
cellular_component GO:0016020 membrane
molecular_function GO:0140096 catalytic activity, acting on a protein
molecular_function GO:0016787 hydrolase activity