Moc09g00450 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g00450
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	glycine-rich protein 23-like
Location	chr9: 469974 .. 470372 (-)
RNA-Seq Expression	Moc09g00450
Synteny	Moc09g00450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAGTTTTCATGACTTTGCTTTTGGCTCTGGTGGCCACTCACGCTATGGCTAGGCCTACGCCTACGCCGACAGACGCCACCTTCAAGGACCAAAAGAACTTCTTCACCTATGGTGGTCTGGGTGGCTACTCTGGCATCGGCAACAATGGCCTCCCCTTCGGCGGGGTCGGTGGTGCAGTTGGGGGCGGTGGCCTCGGTGGCGGCCTTGGAGGTGGACTCGGTGGCGGTACTGGGATCGGCGGAGGTCTAGGCGGCTTGGGAGGCACGGGAGGCGGCTTGGGCGGTAACGTTGGTGGCATCGGAGGAACCATCGGAGGCGGAGGTGCCAGTGGTGGTCTCGGTGGCGGACTTGGCGGCGGACTTGGTGGTGGCTCTGCTCTTCCTTATCCTTGA

mRNA sequence

ATGGCGAAAGTTTTCATGACTTTGCTTTTGGCTCTGGTGGCCACTCACGCTATGGCTAGGCCTACGCCTACGCCGACAGACGCCACCTTCAAGGACCAAAAGAACTTCTTCACCTATGGTGGTCTGGGTGGCTACTCTGGCATCGGCAACAATGGCCTCCCCTTCGGCGGGGTCGGTGGTGCAGTTGGGGGCGGTGGCCTCGGTGGCGGCCTTGGAGGTGGACTCGGTGGCGGTACTGGGATCGGCGGAGGTCTAGGCGGCTTGGGAGGCACGGGAGGCGGCTTGGGCGGTAACGTTGGTGGCATCGGAGGAACCATCGGAGGCGGAGGTGCCAGTGGTGGTCTCGGTGGCGGACTTGGCGGCGGACTTGGTGGTGGCTCTGCTCTTCCTTATCCTTGA

Coding sequence (CDS)

ATGGCGAAAGTTTTCATGACTTTGCTTTTGGCTCTGGTGGCCACTCACGCTATGGCTAGGCCTACGCCTACGCCGACAGACGCCACCTTCAAGGACCAAAAGAACTTCTTCACCTATGGTGGTCTGGGTGGCTACTCTGGCATCGGCAACAATGGCCTCCCCTTCGGCGGGGTCGGTGGTGCAGTTGGGGGCGGTGGCCTCGGTGGCGGCCTTGGAGGTGGACTCGGTGGCGGTACTGGGATCGGCGGAGGTCTAGGCGGCTTGGGAGGCACGGGAGGCGGCTTGGGCGGTAACGTTGGTGGCATCGGAGGAACCATCGGAGGCGGAGGTGCCAGTGGTGGTCTCGGTGGCGGACTTGGCGGCGGACTTGGTGGTGGCTCTGCTCTTCCTTATCCTTGA

Protein sequence

MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGGAVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASGGLGGGLGGGLGGGSALPYP

Homology

[Close]

BLAST of Moc09g00450 vs. NCBI nr
Match: XP_022143624.1 (glycine-rich protein 23-like [Momordica charantia])

HSP 1 Score: 202.2 bits (513), Expect = 2.7e-48
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60
           MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG
Sbjct: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60

Query: 61  AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASGGLGGGLG 120
           AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASGGLGGGLG
Sbjct: 61  AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASGGLGGGLG 120

Query: 121 GGLGGGSALPYP 133
           GGLGGGSALPYP
Sbjct: 121 GGLGGGSALPYP 132

[Close]

BLAST of Moc09g00450 vs. NCBI nr
Match: KAA0050560.1 (acanthoscurrin-1-like [Cucumis melo var. makuwa] >TYK18800.1 acanthoscurrin-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 142.5 bits (358), Expect = 2.6e-30
Identity = 106/135 (78.52%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60
           MAK+FM LLLALVATHA+AR  PTP D TF DQKNF TYGG+GGYSGIG+NGLPFGGVGG
Sbjct: 1   MAKLFMALLLALVATHALAR--PTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGG 60

Query: 61  AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGL---GGNVGGIGGTIGGGGASGGLGG 120
           A+GGGGLGGGLGGGLGG TGIGGGLGGLGGTGGGL   GG  GG+GG + GGG  GGLGG
Sbjct: 61  AIGGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGL-GGGLGGGLGG 120

Query: 121 GLGGGLGGGSALPYP 133
           GLGGG+GG S + YP
Sbjct: 121 GLGGGVGGASGVTYP 132

[Close]

BLAST of Moc09g00450 vs. NCBI nr
Match: XP_011659762.1 (glycine-rich protein 5 [Cucumis sativus])

HSP 1 Score: 136.7 bits (343), Expect = 1.4e-28
Identity = 106/138 (76.81%), Postives = 113/138 (81.88%), Query Frame = 0


Query: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60
           MAK+FM LLLALVATHA+AR  PTP D TF DQKNF TYGG+GGYSGIGNNGLPFGG+GG
Sbjct: 1   MAKLFMALLLALVATHALAR--PTPKDDTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGG 60

Query: 61  AVG----GGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIG--GGGASGG 120
           A+G    GGGLGGGLGGGLGGGTGIGGGLGGLGG GGG     GGIGGT G  GGG  GG
Sbjct: 61  AIGGGGLGGGLGGGLGGGLGGGTGIGGGLGGLGGPGGGF----GGIGGTTGGLGGGLGGG 120

Query: 121 LGGGLGGGLGGGSALPYP 133
           LGGGLGGG+GG S + YP
Sbjct: 121 LGGGLGGGVGGASGVTYP 132

[Close]

BLAST of Moc09g00450 vs. NCBI nr
Match: KAE8646236.1 (hypothetical protein Csa_016187 [Cucumis sativus])

HSP 1 Score: 136.7 bits (343), Expect = 1.4e-28
Identity = 106/138 (76.81%), Postives = 113/138 (81.88%), Query Frame = 0


Query: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60
           MAK+FM LLLALVATHA+AR  PTP D TF DQKNF TYGG+GGYSGIGNNGLPFGG+GG
Sbjct: 38  MAKLFMALLLALVATHALAR--PTPKDDTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGG 97

Query: 61  AVG----GGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIG--GGGASGG 120
           A+G    GGGLGGGLGGGLGGGTGIGGGLGGLGG GGG     GGIGGT G  GGG  GG
Sbjct: 98  AIGGGGLGGGLGGGLGGGLGGGTGIGGGLGGLGGPGGGF----GGIGGTTGGLGGGLGGG 157

Query: 121 LGGGLGGGLGGGSALPYP 133
           LGGGLGGG+GG S + YP
Sbjct: 158 LGGGLGGGVGGASGVTYP 169

[Close]

BLAST of Moc09g00450 vs. NCBI nr
Match: XP_008462124.1 (PREDICTED: acanthoscurrin-1-like [Cucumis melo])

HSP 1 Score: 135.2 bits (339), Expect = 4.1e-28
Identity = 102/130 (78.46%), Postives = 110/130 (84.62%), Query Frame = 0


Query: 6   MTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGGAVGGG 65
           M LLLALVATHA+AR  PTP D TF DQKNF TYGG+GGYSGIG+NGLPFGGVGGA+GGG
Sbjct: 1   MALLLALVATHALAR--PTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGG 60

Query: 66  GLGGGLGGGLGGGTGIGGGLGGLGGTGGGL---GGNVGGIGGTIGGGGASGGLGGGLGGG 125
           GLGGGLGGGLGG TGIGGGLGGLGGTGGGL   GG  GG+GG + GGG  GGLGGGLGGG
Sbjct: 61  GLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGL-GGGLGGGLGGGLGGG 120

Query: 126 LGGGSALPYP 133
           +GG S + YP
Sbjct: 121 VGGASGVTYP 127

[Close]

BLAST of Moc09g00450 vs. ExPASy TrEMBL
Match: A0A6J1CPV7 (glycine-rich protein 23-like OS=Momordica charantia OX=3673 GN=LOC111013480 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.3e-48
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60
           MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG
Sbjct: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60

Query: 61  AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASGGLGGGLG 120
           AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASGGLGGGLG
Sbjct: 61  AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASGGLGGGLG 120

Query: 121 GGLGGGSALPYP 133
           GGLGGGSALPYP
Sbjct: 121 GGLGGGSALPYP 132

[Close]

BLAST of Moc09g00450 vs. ExPASy TrEMBL
Match: A0A5A7U5T7 (Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00150 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.3e-30
Identity = 106/135 (78.52%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60
           MAK+FM LLLALVATHA+AR  PTP D TF DQKNF TYGG+GGYSGIG+NGLPFGGVGG
Sbjct: 1   MAKLFMALLLALVATHALAR--PTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGG 60

Query: 61  AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGL---GGNVGGIGGTIGGGGASGGLGG 120
           A+GGGGLGGGLGGGLGG TGIGGGLGGLGGTGGGL   GG  GG+GG + GGG  GGLGG
Sbjct: 61  AIGGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGL-GGGLGGGLGG 120

Query: 121 GLGGGLGGGSALPYP 133
           GLGGG+GG S + YP
Sbjct: 121 GLGGGVGGASGVTYP 132

[Close]

BLAST of Moc09g00450 vs. ExPASy TrEMBL
Match: A0A0A0K9U1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336450 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 6.9e-29
Identity = 106/138 (76.81%), Postives = 113/138 (81.88%), Query Frame = 0


Query: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60
           MAK+FM LLLALVATHA+AR  PTP D TF DQKNF TYGG+GGYSGIGNNGLPFGG+GG
Sbjct: 1   MAKLFMALLLALVATHALAR--PTPKDDTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGG 60

Query: 61  AVG----GGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIG--GGGASGG 120
           A+G    GGGLGGGLGGGLGGGTGIGGGLGGLGG GGG     GGIGGT G  GGG  GG
Sbjct: 61  AIGGGGLGGGLGGGLGGGLGGGTGIGGGLGGLGGPGGGF----GGIGGTTGGLGGGLGGG 120

Query: 121 LGGGLGGGLGGGSALPYP 133
           LGGGLGGG+GG S + YP
Sbjct: 121 LGGGLGGGVGGASGVTYP 132

[Close]

BLAST of Moc09g00450 vs. ExPASy TrEMBL
Match: A0A1S3CGR1 (acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103500553 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.0e-28
Identity = 102/130 (78.46%), Postives = 110/130 (84.62%), Query Frame = 0


Query: 6   MTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGGAVGGG 65
           M LLLALVATHA+AR  PTP D TF DQKNF TYGG+GGYSGIG+NGLPFGGVGGA+GGG
Sbjct: 1   MALLLALVATHALAR--PTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGG 60

Query: 66  GLGGGLGGGLGGGTGIGGGLGGLGGTGGGL---GGNVGGIGGTIGGGGASGGLGGGLGGG 125
           GLGGGLGGGLGG TGIGGGLGGLGGTGGGL   GG  GG+GG + GGG  GGLGGGLGGG
Sbjct: 61  GLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGL-GGGLGGGLGGGLGGG 120

Query: 126 LGGGSALPYP 133
           +GG S + YP
Sbjct: 121 VGGASGVTYP 127

[Close]

BLAST of Moc09g00450 vs. ExPASy TrEMBL
Match: A0A6J1KVV3 (acanthoscurrin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111498068 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 4.0e-21
Identity = 97/132 (73.48%), Postives = 108/132 (81.82%), Query Frame = 0


Query: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60
           MAK+FM +LLAL+ATHA+AR  PTP DATF DQKNF TYGGLGGYSGIG+NGLPFGG+GG
Sbjct: 1   MAKLFMAMLLALLATHALAR--PTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGG 60

Query: 61  AVGG---GGLG---GGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASGG 120
           AVGG   GG+G   GGLGG  GGG G+GGGLG  GG GGGLGG  GG+GGT+GGG   GG
Sbjct: 61  AVGGTGPGGIGGGIGGLGGFGGGGAGLGGGLG--GGLGGGLGG--GGLGGTMGGGNLGGG 120

Query: 121 LGGGLGGGLGGG 127
           LGG +GGGLGGG
Sbjct: 121 LGGTVGGGLGGG 126

The following BLAST results are available for this feature:

BLAST of Moc09g00450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143624.1	2.7e-48	100.00	glycine-rich protein 23-like [Momordica charantia]	[more]
KAA0050560.1	2.6e-30	78.52	acanthoscurrin-1-like [Cucumis melo var. makuwa] >TYK18800.1 acanthoscurrin-1-li...	[more]
XP_011659762.1	1.4e-28	76.81	glycine-rich protein 5 [Cucumis sativus]	[more]
KAE8646236.1	1.4e-28	76.81	hypothetical protein Csa_016187 [Cucumis sativus]	[more]
XP_008462124.1	4.1e-28	78.46	PREDICTED: acanthoscurrin-1-like [Cucumis melo]	[more]

BLAST of Moc09g00450 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc09g00450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPV7	1.3e-48	100.00	glycine-rich protein 23-like OS=Momordica charantia OX=3673 GN=LOC111013480 PE=4...	[more]
A0A5A7U5T7	1.3e-30	78.52	Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94...	[more]
A0A0A0K9U1	6.9e-29	76.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336450 PE=4 SV=1	[more]
A0A1S3CGR1	2.0e-28	78.46	acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103500553 PE=4 SV=1	[more]
A0A6J1KVV3	4.0e-21	73.48	acanthoscurrin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111498068 PE=4 SV=1	[more]

BLAST of Moc09g00450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34463:SF11	GLYCINE-RICH PROTEIN	coord: 1..132
None	No IPR available	PANTHER	PTHR34463	GLYCINE-RICH PROTEIN	coord: 1..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g00450.1	Moc09g00450.1	mRNA