Moc09g00050 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g00050
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	ribosomal RNA-processing protein 17-like
Location	chr9: 56023 .. 57892 (-)
RNA-Seq Expression	Moc09g00050
Synteny	Moc09g00050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGAGAACGAAGGGGACGAAGGAGGTGAGCTTGCACAGCTTTGTGGTTCCCACATAAAGAAGAGAGCTCTCAGGAACAAAGCTCTTTCAGTGTCTTTCAATGAGAAAGACTTGCGGTAACCGTAAATTTGATAAATCGGTTAATTTGGAAATTTTTTTTTGGTATTGATTTCTAGTTAACTTTTGTTTTTGAATCTGATTTTGGCTTGGATTTTCCTTAGTGACTATGTAACTGGATTTCATAAGAGGAAGAAGAAGAGGAGAAAGGAAGCAGAGAAGCAGCAAGAGGAAGCGCATCAAATTACGCAAAAAGGTTTTAAAAAAAAGTGCTATTTTTCTTAAAAAAACTGATGAAACAGATTTCTTTTTTATTCTTGGGAAGTTAACTTTGGAGAGATATAAAAAGAAAAGGGAAGGAGAAACTACAATGATTGTTCTGCTCTTGAAAAATATGTCTCTGAGCAATACAACTTTTCTAGCCTTTACCGAACTTAGGATTGCACATGAAAATTCTTTTATGGTAGATTTTAGATTGTCCCAAGTTTAAGATTTCCTGGGGATTCTGGAGATCAGGCTAGTTATGAACTAAAGATACCAATTATGTGTAAGGTTAAAGAATTCATTTCAATCTTTAGTTTCATAGGTCACGTCGGGTGTTTAGGAGACTTGCACTTATCTCTCTTTCACAGATCTGCAAGCAATGATGTCTGAACTTAATTCTACGTTCATTGGTATGACAAAATTAGAAGGCATACTTATGCAATTAAGTTTGGGCACCTCTTGAAATGTGGAAACGTCAGATCGTTCCTTTGAGAAAAATTCAAATGGCCTTATGATTTTGACAATAATATCGCCACAAATGACCATAGTTAGGGAGGGTTAGGGAGGTGATTTATGTTATGAGAGACTGCCTAGTAGATTTTCTGTTACTTTTAATTGTGAACCCCTAAACGTTTCTTTTTCTTTTCATCCGGGATTTTTTTCTCTCTTTCGCTTTTATGCATATATCAAATCATTTTTCAACTGAAATGGTCCTATATAGTCATGTATATATTGTATTTTTATCACATAAGTTGTGTAAAATATTATTGACAGAGGAAACAAGAAAGAAAACTGCCTTTTATATTTTTTTTCTGTAGCATATGGGAACTATTATCTGAATGTCTCAAATTATCTCGCAGAGAAAGGAAGAAAAAGAGCTGGTGCTATATGGTGGTGTTCTACCAGCTGATTGGCCGGTTGACAAGCAGAATGATGATCATGAGGATGAGGACGAGGAAGAGAAGTCATTTGCCCCAATTTCTGGTGTTTTACAAAAAAATTCATATTAAACACAAGTCTCTTCAACTAAGCATGATGAAATAAAAGTAATTACAAGTTCGGCTGTCATTATACTATGGGAAGAAAGAAATGTCCATCTTAGAGAATCAGATCAGACATTATTTTTGTTCATAGGGAAGCTAAAAGTGACATTAACAACATTGTCTTCAAGCCTTCAAAATTTTCTTTGTAAAAACTTTGGAACCTGGAGAGTATTTTGCTATTAAACATGAGATTGTTATCTATGTTACAGAGCTACACATCATGTAGTTTTGATCCGAAGGTGTTTGTGGTTTTCTTTGTAGAGATGACGACGTATGACAGTGGTAACATTAAAGTCACGGTGACAACTAGTGAGGTATCTCGTGATGAAAAAATATATCCCATTGACAAGCCACAGACAACAACAAGCCAATTGGTTTCAAAGGATAAGAAGCACAATCTGCCAATTACCAAGAAGAAGCCATTAAATAAAGTTGCAAAACAGAAGTCAAGGCTGAAGCCCCGAAGTAAACGAGAGAAAAAGAAGGGAAGAAGAAAGAAATAG

mRNA sequence

ATGGTGGAGAACGAAGGGGACGAAGGAGGTGAGCTTGCACAGCTTTGTGGTTCCCACATAAAGAAGAGAGCTCTCAGGAACAAAGCTCTTTCAGTGTCTTTCAATGAGAAAGACTTGCGAAAGGAAGAAAAAGAGCTGGTGCTATATGGTGGTGTTCTACCAGCTGATTGGCCGGTTGACAAGCAGAATGATGATCATGAGGATGAGGACGAGGAAGAGAAGTCATTTGCCCCAATTTCTGAGATGACGACGTATGACAGTGGTAACATTAAAGTCACGGTGACAACTAGTGAGGTATCTCGTGATGAAAAAATATATCCCATTGACAAGCCACAGACAACAACAAGCCAATTGGTTTCAAAGGATAAGAAGCACAATCTGCCAATTACCAAGAAGAAGCCATTAAATAAAGTTGCAAAACAGAAGTCAAGGCTGAAGCCCCGAAGTAAACGAGAGAAAAAGAAGGGAAGAAGAAAGAAATAG

Coding sequence (CDS)

ATGGTGGAGAACGAAGGGGACGAAGGAGGTGAGCTTGCACAGCTTTGTGGTTCCCACATAAAGAAGAGAGCTCTCAGGAACAAAGCTCTTTCAGTGTCTTTCAATGAGAAAGACTTGCGAAAGGAAGAAAAAGAGCTGGTGCTATATGGTGGTGTTCTACCAGCTGATTGGCCGGTTGACAAGCAGAATGATGATCATGAGGATGAGGACGAGGAAGAGAAGTCATTTGCCCCAATTTCTGAGATGACGACGTATGACAGTGGTAACATTAAAGTCACGGTGACAACTAGTGAGGTATCTCGTGATGAAAAAATATATCCCATTGACAAGCCACAGACAACAACAAGCCAATTGGTTTCAAAGGATAAGAAGCACAATCTGCCAATTACCAAGAAGAAGCCATTAAATAAAGTTGCAAAACAGAAGTCAAGGCTGAAGCCCCGAAGTAAACGAGAGAAAAAGAAGGGAAGAAGAAAGAAATAG

Protein sequence

MVENEGDEGGELAQLCGSHIKKRALRNKALSVSFNEKDLRKEEKELVLYGGVLPADWPVDKQNDDHEDEDEEEKSFAPISEMTTYDSGNIKVTVTTSEVSRDEKIYPIDKPQTTTSQLVSKDKKHNLPITKKKPLNKVAKQKSRLKPRSKREKKKGRRKK

Homology

[Close]

BLAST of Moc09g00050 vs. NCBI nr
Match: XP_022157484.1 (ribosomal RNA-processing protein 17-like [Momordica charantia])

HSP 1 Score: 280.8 bits (717), Expect = 7.4e-72
Identity = 160/195 (82.05%), Postives = 160/195 (82.05%), Query Frame = 0


Query: 1   MVENEGDEGGELAQLCGSHIKKRALRNKALSVSFNEKDLR-------------------- 60
           MVENEGDEGGELAQLCGSHIKKRALRNKALSVSFNEKDLR                    
Sbjct: 1   MVENEGDEGGELAQLCGSHIKKRALRNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60

Query: 61  ---------------KEEKELVLYGGVLPADWPVDKQNDDHEDEDEEEKSFAPISEMTTY 120
                          KEEKELVLYGGVLPADWPVDKQNDDHEDEDEEEKSFAPISEMTTY
Sbjct: 61  QEEAHQITQKGFKKKKEEKELVLYGGVLPADWPVDKQNDDHEDEDEEEKSFAPISEMTTY 120

Query: 121 DSGNIKVTVTTSEVSRDEKIYPIDKPQTTTSQLVSKDKKHNLPITKKKPLNKVAKQKSRL 161
           DSGNIKVTVTTSEVSRDEKIYPIDKPQTTTSQLVSKDKKHNLPITKKKPLNKVAKQKSRL
Sbjct: 121 DSGNIKVTVTTSEVSRDEKIYPIDKPQTTTSQLVSKDKKHNLPITKKKPLNKVAKQKSRL 180

[Close]

BLAST of Moc09g00050 vs. NCBI nr
Match: XP_022142095.1 (ribosomal RNA-processing protein 17-like [Momordica charantia] >XP_022142096.1 ribosomal RNA-processing protein 17-like [Momordica charantia])

HSP 1 Score: 218.4 bits (555), Expect = 4.5e-53
Identity = 132/196 (67.35%), Postives = 144/196 (73.47%), Query Frame = 0


Query: 1   MVENEGDEGGELAQLCGSHIKKRALRNKALSVSFNEKDL--------------------- 60
           MV+N+GDEGGELAQ  G HIKKRAL+NKAL+VSFNEKDL                     
Sbjct: 1   MVKNDGDEGGELAQPRGRHIKKRALKNKALAVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60

Query: 61  ---------------RKEEKELVLYGGVLPADWPVDKQNDDHEDEDEEEKSFAPISEMTT 120
                          RKEEKELVLYGG+LPAD PVD+QNDDH  E+EEEK FAPISE TT
Sbjct: 61  QEEAKRRKRIELRKKRKEEKELVLYGGILPADRPVDEQNDDH--EEEEEKPFAPISETTT 120

Query: 121 YDSGNIKVTVTTSEVSRDEKIYPIDKPQTTTSQLVSKDKKHNLPITKKKPLNKVAKQKSR 161
           YDSGNIKVTV TSEVSRD +I PIDK QT T+QLV+KDKKHNLPITKKKP  KVAKQKSR
Sbjct: 121 YDSGNIKVTVITSEVSRDGEICPIDKSQTATTQLVAKDKKHNLPITKKKPFKKVAKQKSR 180

[Close]

BLAST of Moc09g00050 vs. NCBI nr
Match: XP_038881021.1 (nucleolar protein 12 [Benincasa hispida])

HSP 1 Score: 202.6 bits (514), Expect = 2.6e-48
Identity = 123/198 (62.12%), Postives = 140/198 (70.71%), Query Frame = 0


Query: 1   MVENEGDEGGELAQLCGSHIKKRALRNKALSVSFNEKDL--------------------- 60
           MV N+G+EG ELAQ    HIKKRALRNKALSVSFNEKDL                     
Sbjct: 9   MVRNDGEEGAELAQPHARHIKKRALRNKALSVSFNEKDLRDFVTGFHKRKKKRRKEAKKQ 68

Query: 61  ---------------RKEEKELVLYGGVLPADWPVDKQNDDHE--DEDEEEKSFAPISEM 120
                          R+ EK+LVLYGGVLPAD PVD++NDDHE  +EDEEEK  AP SE 
Sbjct: 69  QEEAIRRKRIEARKKRRLEKDLVLYGGVLPADRPVDEENDDHEEGEEDEEEKPLAPFSET 128

Query: 121 TTYDSGNIKVTVTTSEVSRDEKIYPIDKPQTTTSQLVSKDKKHNLPITKKKPLNKVAKQK 161
           TTYDSGNIKVTV TSEVSR+E+I PIDKPQT T+QL +KDKKHNLP+TKKKP  KVAKQ+
Sbjct: 129 TTYDSGNIKVTVITSEVSREEEIDPIDKPQTATTQLFAKDKKHNLPVTKKKPFKKVAKQR 188

[Close]

BLAST of Moc09g00050 vs. NCBI nr
Match: XP_023517913.1 (ribosomal RNA-processing protein 17 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 196.1 bits (497), Expect = 2.4e-46
Identity = 122/198 (61.62%), Postives = 139/198 (70.20%), Query Frame = 0


Query: 1   MVENEGDEGGELAQLCGSHIKKRALRNKALSVSFNEKDL--------------------- 60
           MV+NE +EGG L Q    HIKK+AL+NKALSVSFNEKDL                     
Sbjct: 1   MVKNEAEEGGALTQPHARHIKKKALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60

Query: 61  ---------------RKEEKELVLYGGVLPADWPVDKQNDDHE--DEDEEEKSFAPISEM 120
                          RK EKELVL+GGVLPAD PVD+QNDD +  DEDEEEK  APISE 
Sbjct: 61  QEEAKRRKRIEERKKRKIEKELVLHGGVLPADRPVDEQNDDLKDGDEDEEEKPLAPISET 120

Query: 121 TTYDSGNIKVTVTTSEVSRDEKIYPIDKPQTTTSQLVSKDKKHNLPITKKKPLNKVAKQK 161
           TTYDSGNIKVTVTTSEV RDE+I PIDKPQ +TSQL++KDKKH+LP+TKKKP  KVA++K
Sbjct: 121 TTYDSGNIKVTVTTSEVRRDEEIDPIDKPQASTSQLLAKDKKHSLPVTKKKPFKKVARKK 180

[Close]

BLAST of Moc09g00050 vs. NCBI nr
Match: KAG6594625.1 (hypothetical protein SDJN03_11178, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 195.3 bits (495), Expect = 4.1e-46
Identity = 121/198 (61.11%), Postives = 139/198 (70.20%), Query Frame = 0


Query: 1   MVENEGDEGGELAQLCGSHIKKRALRNKALSVSFNEKDL--------------------- 60
           MV+NE +EGG L Q    HIKK+AL+NKALSVSFNEKDL                     
Sbjct: 1   MVKNEAEEGGALTQPHARHIKKKALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60

Query: 61  ---------------RKEEKELVLYGGVLPADWPVDKQNDDHE--DEDEEEKSFAPISEM 120
                          RK EKELVL+GGVLPAD PVD+QNDD +  DEDEEE+  APISE 
Sbjct: 61  QEEAKRRKRIEERKKRKIEKELVLHGGVLPADRPVDEQNDDLKDGDEDEEERPLAPISET 120

Query: 121 TTYDSGNIKVTVTTSEVSRDEKIYPIDKPQTTTSQLVSKDKKHNLPITKKKPLNKVAKQK 161
           TTYDSGNIKVTVTTSEV RDE+I PIDKPQ +TSQL++KDKKH+LP+TKKKP  KVA++K
Sbjct: 121 TTYDSGNIKVTVTTSEVRRDEEINPIDKPQASTSQLLAKDKKHSLPVTKKKPFKKVARKK 180

[Close]

BLAST of Moc09g00050 vs. ExPASy TrEMBL
Match: A0A6J1DWL6 (ribosomal RNA-processing protein 17-like OS=Momordica charantia OX=3673 GN=LOC111024179 PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.6e-72
Identity = 160/195 (82.05%), Postives = 160/195 (82.05%), Query Frame = 0


Query: 1   MVENEGDEGGELAQLCGSHIKKRALRNKALSVSFNEKDLR-------------------- 60
           MVENEGDEGGELAQLCGSHIKKRALRNKALSVSFNEKDLR                    
Sbjct: 1   MVENEGDEGGELAQLCGSHIKKRALRNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60

Query: 61  ---------------KEEKELVLYGGVLPADWPVDKQNDDHEDEDEEEKSFAPISEMTTY 120
                          KEEKELVLYGGVLPADWPVDKQNDDHEDEDEEEKSFAPISEMTTY
Sbjct: 61  QEEAHQITQKGFKKKKEEKELVLYGGVLPADWPVDKQNDDHEDEDEEEKSFAPISEMTTY 120

Query: 121 DSGNIKVTVTTSEVSRDEKIYPIDKPQTTTSQLVSKDKKHNLPITKKKPLNKVAKQKSRL 161
           DSGNIKVTVTTSEVSRDEKIYPIDKPQTTTSQLVSKDKKHNLPITKKKPLNKVAKQKSRL
Sbjct: 121 DSGNIKVTVTTSEVSRDEKIYPIDKPQTTTSQLVSKDKKHNLPITKKKPLNKVAKQKSRL 180

[Close]

BLAST of Moc09g00050 vs. ExPASy TrEMBL
Match: A0A6J1CL67 (ribosomal RNA-processing protein 17-like OS=Momordica charantia OX=3673 GN=LOC111012309 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.2e-53
Identity = 132/196 (67.35%), Postives = 144/196 (73.47%), Query Frame = 0


Query: 1   MVENEGDEGGELAQLCGSHIKKRALRNKALSVSFNEKDL--------------------- 60
           MV+N+GDEGGELAQ  G HIKKRAL+NKAL+VSFNEKDL                     
Sbjct: 1   MVKNDGDEGGELAQPRGRHIKKRALKNKALAVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60

Query: 61  ---------------RKEEKELVLYGGVLPADWPVDKQNDDHEDEDEEEKSFAPISEMTT 120
                          RKEEKELVLYGG+LPAD PVD+QNDDH  E+EEEK FAPISE TT
Sbjct: 61  QEEAKRRKRIELRKKRKEEKELVLYGGILPADRPVDEQNDDH--EEEEEKPFAPISETTT 120

Query: 121 YDSGNIKVTVTTSEVSRDEKIYPIDKPQTTTSQLVSKDKKHNLPITKKKPLNKVAKQKSR 161
           YDSGNIKVTV TSEVSRD +I PIDK QT T+QLV+KDKKHNLPITKKKP  KVAKQKSR
Sbjct: 121 YDSGNIKVTVITSEVSRDGEICPIDKSQTATTQLVAKDKKHNLPITKKKPFKKVAKQKSR 180

[Close]

BLAST of Moc09g00050 vs. ExPASy TrEMBL
Match: A0A6J1EG67 (ribosomal RNA-processing protein 17 OS=Cucurbita moschata OX=3662 GN=LOC111433808 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 9.8e-46
Identity = 121/198 (61.11%), Postives = 138/198 (69.70%), Query Frame = 0


Query: 1   MVENEGDEGGELAQLCGSHIKKRALRNKALSVSFNEKDL--------------------- 60
           MV+NE +EGG L Q    HIKK+AL+NKALSVSFNEKDL                     
Sbjct: 1   MVKNEAEEGGALTQPHARHIKKKALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60

Query: 61  ---------------RKEEKELVLYGGVLPADWPVDKQNDDHE--DEDEEEKSFAPISEM 120
                          RK EK+LVL+GGVLPAD PVD+QNDD +  DEDEEEK  APISE 
Sbjct: 61  QEEAKRRKRIEERKKRKIEKDLVLHGGVLPADRPVDEQNDDLKDGDEDEEEKPLAPISET 120

Query: 121 TTYDSGNIKVTVTTSEVSRDEKIYPIDKPQTTTSQLVSKDKKHNLPITKKKPLNKVAKQK 161
           T YDSGNIKVTVTTSEV RDE+I PIDKPQ +TSQL++KDKKH+LPITKKKP  KVA++K
Sbjct: 121 TMYDSGNIKVTVTTSEVRRDEEIDPIDKPQASTSQLLAKDKKHSLPITKKKPFKKVARKK 180

[Close]

BLAST of Moc09g00050 vs. ExPASy TrEMBL
Match: A0A6J1KRQ7 (ribosomal RNA-processing protein 17 OS=Cucurbita maxima OX=3661 GN=LOC111497040 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.7e-45
Identity = 120/198 (60.61%), Postives = 138/198 (69.70%), Query Frame = 0


Query: 1   MVENEGDEGGELAQLCGSHIKKRALRNKALSVSFNEKDL--------------------- 60
           MV+NE  EGG L Q    H+KK+AL+NKALSVSFNEKDL                     
Sbjct: 1   MVKNEAAEGGALTQPYSRHVKKKALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60

Query: 61  ---------------RKEEKELVLYGGVLPADWPVDKQNDDHE--DEDEEEKSFAPISEM 120
                          RK EK+LVL+GGVLPAD PVD+QNDD +  DEDEEEK  APISE 
Sbjct: 61  QEEAKRRKRIEERKKRKIEKDLVLHGGVLPADRPVDEQNDDLKDGDEDEEEKPLAPISET 120

Query: 121 TTYDSGNIKVTVTTSEVSRDEKIYPIDKPQTTTSQLVSKDKKHNLPITKKKPLNKVAKQK 161
           TTYDSGNIKVTVTTSEV R+E+I PIDKPQ +TSQL++KDKKH+LPITKKKP  KVA++K
Sbjct: 121 TTYDSGNIKVTVTTSEVRREEEIDPIDKPQASTSQLLAKDKKHSLPITKKKPFKKVARKK 180

[Close]

BLAST of Moc09g00050 vs. ExPASy TrEMBL
Match: A0A1S3C1A3 (ribosomal RNA-processing protein 17 OS=Cucumis melo OX=3656 GN=LOC103495882 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 3.1e-44
Identity = 119/196 (60.71%), Postives = 134/196 (68.37%), Query Frame = 0


Query: 1   MVENEGDEGGELAQLCGSHIKKRALRNKALSVSFNEKDL--------------------- 60
           MV+N+G+EGGELAQ    HIKKRAL+NKALSVSFNEKDL                     
Sbjct: 1   MVKNDGEEGGELAQPHARHIKKRALKNKALSVSFNEKDLRDYVTGFHKRKKKRRKEAEKQ 60

Query: 61  ---------------RKEEKELVLYGGVLPADWPVDKQNDDHEDEDEEEKSFAPISEMTT 120
                          RK EK+LVLYGGVLPAD  VD QNDD EDE+EE    AP SE  T
Sbjct: 61  KEEAMRRMRIEARKKRKLEKDLVLYGGVLPADRAVDDQNDDQEDEEEE--PLAPFSEART 120

Query: 121 YDSGNIKVTVTTSEVSRDEKIYPIDKPQTTTSQLVSKDKKHNLPITKKKPLNKVAKQKSR 161
           YD+GN+KVTVTTSEVSR+ +I PIDKPQT  +QL+ KDKKHNLPITKKK   KVAKQ+SR
Sbjct: 121 YDNGNVKVTVTTSEVSREGEIDPIDKPQTAIAQLLGKDKKHNLPITKKKLFKKVAKQRSR 180

[Close]

BLAST of Moc09g00050 vs. TAIR 10
Match: AT1G11240.1 (CONTAINS InterPro DOMAIN/s: Nucleolar protein 12 (InterPro:IPR019186); Has 2484 Blast hits to 1934 proteins in 262 species: Archae - 0; Bacteria - 90; Metazoa - 921; Fungi - 378; Plants - 144; Viruses - 18; Other Eukaryotes - 933 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-09
Identity = 68/191 (35.60%), Postives = 97/191 (50.79%), Query Frame = 0


Query: 7   DEGGELA-QLCGSHIKKRALRNKALSVSFNEKDL--------------RKEE-------- 66
           +E G LA      HI KRA +NK+L+VSF+EKDL              RKE         
Sbjct: 8   EEAGSLATPTSARHIGKRARKNKSLTVSFDEKDLKDFVTGFHKRKKKRRKEAQKQQEEAF 67

Query: 67  -------------KELVLYGGVLPADWPVDKQNDDHEDEDEEEKSFAPISEMTTYDSGNI 126
                        +EL++ G     D    +  D+ + EDEE +  A  S  T YD+G +
Sbjct: 68  RRKRIEARKNRKLEELMVAGN--GEDNEDGEAEDEVDAEDEEAEPDASTSATTMYDTGEL 127

Query: 127 KVTVTTSEVSRDEKIYPIDKPQTTTSQLVSKDK---KHNLPITKKKPLNKVAKQKSRLKP 159
           KVTVTTSE+SR+E+  PI K +T +++  S  K   K  +P+ K KP+ K ++++S  K 
Sbjct: 128 KVTVTTSEISREEE-EPIRKEKTQSTESGSTAKASTKQPVPVRKTKPM-KQSRRRSTTKT 187

The following BLAST results are available for this feature:

BLAST of Moc09g00050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157484.1	7.4e-72	82.05	ribosomal RNA-processing protein 17-like [Momordica charantia]	[more]
XP_022142095.1	4.5e-53	67.35	ribosomal RNA-processing protein 17-like [Momordica charantia] >XP_022142096.1 r...	[more]
XP_038881021.1	2.6e-48	62.12	nucleolar protein 12 [Benincasa hispida]	[more]
XP_023517913.1	2.4e-46	61.62	ribosomal RNA-processing protein 17 [Cucurbita pepo subsp. pepo]	[more]
KAG6594625.1	4.1e-46	61.11	hypothetical protein SDJN03_11178, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Moc09g00050 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc09g00050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWL6	3.6e-72	82.05	ribosomal RNA-processing protein 17-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1CL67	2.2e-53	67.35	ribosomal RNA-processing protein 17-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1EG67	9.8e-46	61.11	ribosomal RNA-processing protein 17 OS=Cucurbita moschata OX=3662 GN=LOC11143380...	[more]
A0A6J1KRQ7	1.7e-45	60.61	ribosomal RNA-processing protein 17 OS=Cucurbita maxima OX=3661 GN=LOC111497040 ...	[more]
A0A1S3C1A3	3.1e-44	60.71	ribosomal RNA-processing protein 17 OS=Cucumis melo OX=3656 GN=LOC103495882 PE=3...	[more]

BLAST of Moc09g00050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11240.1	1.9e-09	35.60	CONTAINS InterPro DOMAIN/s: Nucleolar protein 12 (InterPro:IPR019186); Has 2484 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g00050.1	Moc09g00050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005730	nucleolus