Moc08g45260 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g45260
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	E3 ubiquitin-protein ligase RHA1B-like
Location	chr8: 34724010 .. 34724366 (-)
RNA-Seq Expression	Moc08g45260
Synteny	Moc08g45260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCGTTGCTGTGTTGGCCGAGACGACAAGAAACTTAGCGGCGGCGTATCCAATGGAGCTTCTATTTGACCTGGACATGGTTCTCTCCGGCGACGACGACTTCGGTTGCTGCCACGTCACCGCGGCTAATTCCTCCGATTCTATTGTAGCGGATTTGCCGACGGTGGTGGCCGACGTTTGCGCCGTTTGCTTCGAGGATTTCCGGTCAGACGAGGGCGGAAAGCAAATCCCCTGCGGACACGTGTACCATGAGCCTTGCATCTCCTCCTGGCTCGCAGTCGCCGACTGCTGCCCCCTCTGCCGCCGCCGAGTGGAACCCCCTCCTCCTCCTTCCACTTCCATTCCCCACTAG

mRNA sequence

ATGGCTGCCGTTGCTGTGTTGGCCGAGACGACAAGAAACTTAGCGGCGGCGTATCCAATGGAGCTTCTATTTGACCTGGACATGGTTCTCTCCGGCGACGACGACTTCGGTTGCTGCCACGTCACCGCGGCTAATTCCTCCGATTCTATTGTAGCGGATTTGCCGACGGTGGTGGCCGACGTTTGCGCCGTTTGCTTCGAGGATTTCCGGTCAGACGAGGGCGGAAAGCAAATCCCCTGCGGACACGTGTACCATGAGCCTTGCATCTCCTCCTGGCTCGCAGTCGCCGACTGCTGCCCCCTCTGCCGCCGCCGAGTGGAACCCCCTCCTCCTCCTTCCACTTCCATTCCCCACTAG

Coding sequence (CDS)

ATGGCTGCCGTTGCTGTGTTGGCCGAGACGACAAGAAACTTAGCGGCGGCGTATCCAATGGAGCTTCTATTTGACCTGGACATGGTTCTCTCCGGCGACGACGACTTCGGTTGCTGCCACGTCACCGCGGCTAATTCCTCCGATTCTATTGTAGCGGATTTGCCGACGGTGGTGGCCGACGTTTGCGCCGTTTGCTTCGAGGATTTCCGGTCAGACGAGGGCGGAAAGCAAATCCCCTGCGGACACGTGTACCATGAGCCTTGCATCTCCTCCTGGCTCGCAGTCGCCGACTGCTGCCCCCTCTGCCGCCGCCGAGTGGAACCCCCTCCTCCTCCTTCCACTTCCATTCCCCACTAG

Protein sequence

MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVEPPPPPSTSIPH

Homology

[Close]

BLAST of Moc08g45260 vs. NCBI nr
Match: XP_022154667.1 (E3 ubiquitin-protein ligase RHA1B-like [Momordica charantia])

HSP 1 Score: 250.0 bits (637), Expect = 1.0e-62
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVAD 60
           MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVAD
Sbjct: 1   MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVAD 60

Query: 61  VCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVEPPPPPSTSIPH 119
           VCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVEPPPPPSTSIPH
Sbjct: 61  VCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVEPPPPPSTSIPH 118

[Close]

BLAST of Moc08g45260 vs. NCBI nr
Match: KAG7030453.1 (E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184.9 bits (468), Expect = 4.1e-43
Identity = 90/115 (78.26%), Postives = 97/115 (84.35%), Query Frame = 0


Query: 1   MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVAD 60
           MAAV+V AETTRNLAAAYP+E LFDLDMVLSG DDFGCC ++A   SDS+VADLPTVVAD
Sbjct: 1   MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGADDFGCCQISA---SDSLVADLPTVVAD 60

Query: 61  VCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVEPPPPPSTS 116
           VCAVC EDFR DE GKQIPCGHVYHE CISSWLAVA+CCPLCR  +   PP S S
Sbjct: 61  VCAVCLEDFRPDEDGKQIPCGHVYHESCISSWLAVANCCPLCRCLISGQPPESPS 112

[Close]

BLAST of Moc08g45260 vs. NCBI nr
Match: KAG6599476.1 (E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 184.9 bits (468), Expect = 4.1e-43
Identity = 90/115 (78.26%), Postives = 97/115 (84.35%), Query Frame = 0


Query: 1   MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVAD 60
           MAAV+V AETTRNLAAAYP+E LFDLDMVLSG DDFGCC ++A   SDS+VADLPTVVAD
Sbjct: 1   MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGADDFGCCQISA---SDSLVADLPTVVAD 60

Query: 61  VCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVEPPPPPSTS 116
           VCAVC EDFR DE GKQIPCGHVYHE CISSWLAVA+CCPLCR  +   PP S S
Sbjct: 61  VCAVCLEDFRPDEDGKQIPCGHVYHESCISSWLAVANCCPLCRCLISGQPPESPS 112

[Close]

BLAST of Moc08g45260 vs. NCBI nr
Match: XP_022946863.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata])

HSP 1 Score: 184.5 bits (467), Expect = 5.3e-43
Identity = 90/115 (78.26%), Postives = 97/115 (84.35%), Query Frame = 0


Query: 1   MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVAD 60
           MAAV+V AETTRNLAAAYP+E LFDLDMVLSG DDFGCC ++A   SDS+VADLPTVVAD
Sbjct: 1   MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGADDFGCCQISA---SDSLVADLPTVVAD 60

Query: 61  VCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVEPPPPPSTS 116
           VCAVC EDFR DE GKQIPCGHVYHE CISSWLAVA+CCPLCR  +   PP S S
Sbjct: 61  VCAVCLEDFRPDEDGKQIPCGHVYHESCISSWLAVANCCPLCRCLIAGQPPESPS 112

[Close]

BLAST of Moc08g45260 vs. NCBI nr
Match: XP_023545409.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.0 bits (463), Expect = 1.5e-42
Identity = 89/115 (77.39%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 1   MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVAD 60
           MAAV+V AETTRNLA AYP+E LFDLDMVLSG DDFGCC ++A   SDS+VADLPTVVAD
Sbjct: 1   MAAVSVSAETTRNLAVAYPIEFLFDLDMVLSGADDFGCCQISA---SDSLVADLPTVVAD 60

Query: 61  VCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVEPPPPPSTS 116
           VCAVC EDFR DE GKQIPCGHVYHE CISSWLAVA+CCPLCR  +   PP S S
Sbjct: 61  VCAVCLEDFRPDEDGKQIPCGHVYHESCISSWLAVANCCPLCRCLIAGQPPESPS 112

[Close]

BLAST of Moc08g45260 vs. ExPASy Swiss-Prot
Match: Q9VHI7 (E3 ubiquitin-protein ligase Iruka OS=Drosophila melanogaster OX=7227 GN=Iru PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.0e-09
Identity = 20/43 (46.51%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 62  CAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRR 105
           C++C++DF+ DE  +++PC H+YHE CI  WL +   CP+CR+
Sbjct: 253 CSICWDDFKIDETVRKLPCSHLYHENCIVPWLNLHSTCPICRK 295

[Close]

BLAST of Moc08g45260 vs. ExPASy Swiss-Prot
Match: P90990 (E3 ubiquitin-protein ligase trul-1 OS=Caenorhabditis elegans OX=6239 GN=trul-1 PE=3 SV=3)

HSP 1 Score: 61.2 bits (147), Expect = 8.9e-09
Identity = 22/45 (48.89%), Postives = 29/45 (64.44%), Query Frame = 0


Query: 62  CAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRV 107
           C++CFED + ++    I CGH+YH  CIS W+A    CP CRR V
Sbjct: 13  CSICFEDLKQNDKISAIVCGHIYHHGCISQWIATKRQCPSCRRTV 57

[Close]

BLAST of Moc08g45260 vs. ExPASy Swiss-Prot
Match: Q9ZV51 (RING-H2 finger protein ATL56 OS=Arabidopsis thaliana OX=3702 GN=ATL56 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-08
Identity = 22/46 (47.83%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 62  CAVCFEDFRSDEGGKQIP-CGHVYHEPCISSWLAVADCCPLCRRRV 107
           C VCF+ FR  +  + +P CGHV+H  C+ +WL  A  CP+CR RV
Sbjct: 110 CVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICRARV 155

[Close]

BLAST of Moc08g45260 vs. ExPASy Swiss-Prot
Match: Q9SPL2 (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana OX=3702 GN=CIP8 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-08
Identity = 23/47 (48.94%), Postives = 30/47 (63.83%), Query Frame = 0


Query: 61  VCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVE 108
           VCAVC +     E GK++PCGH YH  CI  WL   + CP+CR ++E
Sbjct: 256 VCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLE 302

[Close]

BLAST of Moc08g45260 vs. ExPASy Swiss-Prot
Match: O22283 (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.4e-08
Identity = 20/45 (44.44%), Postives = 29/45 (64.44%), Query Frame = 0


Query: 62  CAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRV 107
           CAVC E+F      +++PC H+YH  CI  WLA+ + CP+CR  +
Sbjct: 201 CAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHEL 245

[Close]

BLAST of Moc08g45260 vs. ExPASy TrEMBL
Match: A0A6J1DM93 (E3 ubiquitin-protein ligase RHA1B-like OS=Momordica charantia OX=3673 GN=LOC111021870 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 5.0e-63
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVAD 60
           MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVAD
Sbjct: 1   MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVAD 60

Query: 61  VCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVEPPPPPSTSIPH 119
           VCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVEPPPPPSTSIPH
Sbjct: 61  VCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVEPPPPPSTSIPH 118

[Close]

BLAST of Moc08g45260 vs. ExPASy TrEMBL
Match: A0A6J1G511 (E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC111450796 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.6e-43
Identity = 90/115 (78.26%), Postives = 97/115 (84.35%), Query Frame = 0


Query: 1   MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVAD 60
           MAAV+V AETTRNLAAAYP+E LFDLDMVLSG DDFGCC ++A   SDS+VADLPTVVAD
Sbjct: 1   MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGADDFGCCQISA---SDSLVADLPTVVAD 60

Query: 61  VCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVEPPPPPSTS 116
           VCAVC EDFR DE GKQIPCGHVYHE CISSWLAVA+CCPLCR  +   PP S S
Sbjct: 61  VCAVCLEDFRPDEDGKQIPCGHVYHESCISSWLAVANCCPLCRCLIAGQPPESPS 112

[Close]

BLAST of Moc08g45260 vs. ExPASy TrEMBL
Match: A0A0A0LKR7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000930 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.6e-37
Identity = 81/116 (69.83%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 1   MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGCCHVTAANSSDSIVADLPTVVAD 60
           MAA AV+ E T NL + YP+E LFDLD VLSG DD GCC +T    SDS VAD PTVVAD
Sbjct: 1   MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDLGCCQIT---PSDSPVADFPTVVAD 60

Query: 61  VCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVEPPPPPSTSI 117
           VCAVC +DF  DE GKQIPCGHVYHE CISSWL VADCCPLCR  V   PP ST I
Sbjct: 61  VCAVCLDDFHPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLI 113

[Close]

BLAST of Moc08g45260 vs. ExPASy TrEMBL
Match: A0A5A7V2P4 (RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00540 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 3.4e-35
Identity = 80/117 (68.38%), Postives = 85/117 (72.65%), Query Frame = 0


Query: 1   MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGC-CHVTAANSSDSIVADLPTVVA 60
           MAA AV+ E T  L + YP+E LFDLD VLSG DD  C C +T    SDS VAD PTVVA
Sbjct: 1   MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQIT---PSDSPVADFPTVVA 60

Query: 61  DVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVEPPPPPSTSI 117
           DVCAVC +DFR DE GKQIPCGHVYHE CISSWL VADCCPLCR  V   PP ST I
Sbjct: 61  DVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLI 114

[Close]

BLAST of Moc08g45260 vs. ExPASy TrEMBL
Match: A0A1S4DZX3 (RING-H2 finger protein ATL5-like OS=Cucumis melo OX=3656 GN=LOC107991276 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 3.4e-35
Identity = 80/117 (68.38%), Postives = 85/117 (72.65%), Query Frame = 0


Query: 1   MAAVAVLAETTRNLAAAYPMELLFDLDMVLSGDDDFGC-CHVTAANSSDSIVADLPTVVA 60
           MAA AV+ E T  L + YP+E LFDLD VLSG DD  C C +T    SDS VAD PTVVA
Sbjct: 1   MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQIT---PSDSPVADFPTVVA 60

Query: 61  DVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVEPPPPPSTSI 117
           DVCAVC +DFR DE GKQIPCGHVYHE CISSWL VADCCPLCR  V   PP ST I
Sbjct: 61  DVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSTLI 114

[Close]

BLAST of Moc08g45260 vs. TAIR 10
Match: AT1G68180.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 7.5e-11
Identity = 26/57 (45.61%), Postives = 35/57 (61.40%), Query Frame = 0


Query: 50  IVADLPTVVADVCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRV 107
           I+ D   V   VCA+C E+F   E GK++ C H+YH  CI SWL + + CP+CR  V
Sbjct: 126 IITDEDLVKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICRFEV 182

[Close]

BLAST of Moc08g45260 vs. TAIR 10
Match: AT2G18670.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09
Identity = 22/46 (47.83%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 62  CAVCFEDFRSDEGGKQIP-CGHVYHEPCISSWLAVADCCPLCRRRV 107
           C VCF+ FR  +  + +P CGHV+H  C+ +WL  A  CP+CR RV
Sbjct: 110 CVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICRARV 155

[Close]

BLAST of Moc08g45260 vs. TAIR 10
Match: AT5G64920.1 (COP1-interacting protein 8 )

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09
Identity = 23/47 (48.94%), Postives = 30/47 (63.83%), Query Frame = 0


Query: 61  VCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRVE 108
           VCAVC +     E GK++PCGH YH  CI  WL   + CP+CR ++E
Sbjct: 256 VCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLE 302

[Close]

BLAST of Moc08g45260 vs. TAIR 10
Match: AT3G60080.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.4e-09
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 0


Query: 61  VCAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCR 104
           +CAVC EDF   E  +++PC H+YH  CI  WL+  + CPLCR
Sbjct: 168 LCAVCKEDFIIGESARRLPCSHIYHSDCIVPWLSDHNSCPLCR 210

[Close]

BLAST of Moc08g45260 vs. TAIR 10
Match: AT2G39720.1 (RING-H2 finger C2A )

HSP 1 Score: 59.3 bits (142), Expect = 2.4e-09
Identity = 20/45 (44.44%), Postives = 29/45 (64.44%), Query Frame = 0


Query: 62  CAVCFEDFRSDEGGKQIPCGHVYHEPCISSWLAVADCCPLCRRRV 107
           CAVC E+F      +++PC H+YH  CI  WLA+ + CP+CR  +
Sbjct: 201 CAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHEL 245

The following BLAST results are available for this feature:

BLAST of Moc08g45260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154667.1	1.0e-62	100.00	E3 ubiquitin-protein ligase RHA1B-like [Momordica charantia]	[more]
KAG7030453.1	4.1e-43	78.26	E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6599476.1	4.1e-43	78.26	E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma ...	[more]
XP_022946863.1	5.3e-43	78.26	E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]	[more]
XP_023545409.1	1.5e-42	77.39	E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Moc08g45260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9VHI7	4.0e-09	46.51	E3 ubiquitin-protein ligase Iruka OS=Drosophila melanogaster OX=7227 GN=Iru PE=1...	[more]
P90990	8.9e-09	48.89	E3 ubiquitin-protein ligase trul-1 OS=Caenorhabditis elegans OX=6239 GN=trul-1 P...	[more]
Q9ZV51	1.5e-08	47.83	RING-H2 finger protein ATL56 OS=Arabidopsis thaliana OX=3702 GN=ATL56 PE=2 SV=1	[more]
Q9SPL2	1.5e-08	48.94	E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana OX=3702 GN=CIP8 PE=1 SV...	[more]
O22283	3.4e-08	44.44	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]

BLAST of Moc08g45260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DM93	5.0e-63	100.00	E3 ubiquitin-protein ligase RHA1B-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1G511	2.6e-43	78.26	E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A0A0LKR7	1.6e-37	69.83	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000930 P...	[more]
A0A5A7V2P4	3.4e-35	68.38	RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S4DZX3	3.4e-35	68.38	RING-H2 finger protein ATL5-like OS=Cucumis melo OX=3656 GN=LOC107991276 PE=4 SV...	[more]

BLAST of Moc08g45260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68180.1	7.5e-11	45.61	RING/U-box superfamily protein	[more]
AT2G18670.1	1.1e-09	47.83	RING/U-box superfamily protein	[more]
AT5G64920.1	1.1e-09	48.94	COP1-interacting protein 8	[more]
AT3G60080.1	1.4e-09	51.16	RING/U-box superfamily protein	[more]
AT2G39720.1	2.4e-09	44.44	RING-H2 finger C2A	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 62..102 e-value: 8.1E-7 score: 38.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 61..103 e-value: 2.8E-10 score: 40.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 62..103 score: 12.533537
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 56..111 e-value: 4.4E-17 score: 63.0
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 21..106
None	No IPR available	PANTHER	PTHR15710:SF74	E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE	coord: 21..106
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 61..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc08g45260.1	Moc08g45260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
molecular_function	GO:0061630	ubiquitin protein ligase activity