Moc08g43580 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc08g43580
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr8: 33523184 .. 33524313 (+)
RNA-Seq ExpressionMoc08g43580
SyntenyMoc08g43580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGACAAAACTTGGAATGAGATAGATGAGCAGGTCGTTGCAAATATCAGAATGGCACTGGGGGTATTCCGTCTCGTGGTGAAAGAGACGATTGCAAAAGAATTGTTGAAGGGCTTGCAAGACAGGTATGAAAAACCTTCTGCCAATACAAAAATATTTTTATGGACAAAGTATTTTAACATCCACATGGAGGAGGGAACCTCGGTGAATTCCCACATTAATGAGCTCACCGATATCTTGAACAAATTAGAAAAGATGGGTGACAAGATTGAGGAAGAGGTGAAGGCTATGAGGTTGTTGACATCTTTGCCTGATAGTTGGGAGATGATGAAGACCGCTGTGTCGAATTCGCGAGGAGAAAATAGCTTGAAATTTTCAGCTATTTGTGATGCCGTCTTATCTGAAGAAGCCCGTAGAAAATTAGGGAAAATGTCTGCAACTACTTTAGGGGCAGAGAACGGAATTGAATCAGTTTTGGTAGCTCAATTTAAGGGGAAGGGCAAGATGAAGTACAACGGGAAGCAGGAACATAGGAATAACAGGGGTAGTAGGAGTTCCAGTGGGGAAGTTGAATGTTTTTACTGCCATAAGAAGGGCCACTTCAAGAAACACTGCAGGAAGCGTAAGGAGGATCAGGAAAATGAGGACACTCTAAATTACGTGTCAGCGGAGGTGTTAGCTTGTATTGAAGGTAACACAACACCTGTAGACCGGTCATCAGAGTGTGTAGTGGACAGTGCAGTTTCGGTGCATGTAGCTTCAGACAGAAGTTGGTTCACGTCTTTTATTGTAGGAAATCATGGCGCGGTAAGGATGGGAAAATGGGAGACTCTTCAAGATCAGAGGAATTGGATGTTCGTCTGAGGACTGCTAGTGGGACCGAATTAGTTTTGCATGATGTCAGGTATGTACCTAGTTTCAGGATGAATTTGATATCAGTGGGGAAGCTAGATGACGAAGGCTACATAAGTGAGTTTGTAGAGAATAGATGGAACCTCATGAGGCGATCCGACATAGTGGTTGTTGGCCACAGAAAAGCTTCAATGTATGTGTTGAGGTTTGGTGTTGCTAGAGGATTAGGGAGACAGGTCATGCACAGGGCTGCAGATAGTTCAGGGGAGACTTGA

mRNA sequence

ATGACAGACAAAACTTGGAATGAGATAGATGAGCAGGTCGTTGCAAATATCAGAATGGCACTGGGGGTATTCCGTCTCGTGGTGAAAGAGACGATTGCAAAAGAATTGTTGAAGGGCTTGCAAGACAGGTATGAAAAACCTTCTGCCAATACAAAAATATTTTTATGGACAAAGTATTTTAACATCCACATGGAGGAGGGAACCTCGGTGAATTCCCACATTAATGAGCTCACCGATATCTTGAACAAATTAGAAAAGATGGGTGACAAGATTGAGGAAGAGGTGAAGGCTATGAGGTTGTTGACATCTTTGCCTGATAGTTGGGAGATGATGAAGACCGCTGTGTCGAATTCGCGAGGAGAAAATAGCTTGAAATTTTCAGCTATTTGTGATGCCGTCTTATCTGAAGAAGCCCGTAGAAAATTAGGGAAAATGTCTGCAACTACTTTAGGGGCAGAGAACGGAATTGAATCAGTTTTGGTAGCTCAATTTAAGGGGAAGGGCAAGATGAAGTACAACGGGAAGCAGGAACATAGGAATAACAGGGAGAATAGATGGAACCTCATGAGGCGATCCGACATAGTGGTTGTTGGCCACAGAAAAGCTTCAATGTATGTGTTGAGGTTTGGTGTTGCTAGAGGATTAGGGAGACAGGTCATGCACAGGGCTGCAGATAGTTCAGGGGAGACTTGA

Coding sequence (CDS)

ATGACAGACAAAACTTGGAATGAGATAGATGAGCAGGTCGTTGCAAATATCAGAATGGCACTGGGGGTATTCCGTCTCGTGGTGAAAGAGACGATTGCAAAAGAATTGTTGAAGGGCTTGCAAGACAGGTATGAAAAACCTTCTGCCAATACAAAAATATTTTTATGGACAAAGTATTTTAACATCCACATGGAGGAGGGAACCTCGGTGAATTCCCACATTAATGAGCTCACCGATATCTTGAACAAATTAGAAAAGATGGGTGACAAGATTGAGGAAGAGGTGAAGGCTATGAGGTTGTTGACATCTTTGCCTGATAGTTGGGAGATGATGAAGACCGCTGTGTCGAATTCGCGAGGAGAAAATAGCTTGAAATTTTCAGCTATTTGTGATGCCGTCTTATCTGAAGAAGCCCGTAGAAAATTAGGGAAAATGTCTGCAACTACTTTAGGGGCAGAGAACGGAATTGAATCAGTTTTGGTAGCTCAATTTAAGGGGAAGGGCAAGATGAAGTACAACGGGAAGCAGGAACATAGGAATAACAGGGAGAATAGATGGAACCTCATGAGGCGATCCGACATAGTGGTTGTTGGCCACAGAAAAGCTTCAATGTATGTGTTGAGGTTTGGTGTTGCTAGAGGATTAGGGAGACAGGTCATGCACAGGGCTGCAGATAGTTCAGGGGAGACTTGA

Protein sequence

MTDKTWNEIDEQVVANIRMALGVFRLVVKETIAKELLKGLQDRYEKPSANTKIFLWTKYFNIHMEEGTSVNSHINELTDILNKLEKMGDKIEEEVKAMRLLTSLPDSWEMMKTAVSNSRGENSLKFSAICDAVLSEEARRKLGKMSATTLGAENGIESVLVAQFKGKGKMKYNGKQEHRNNRENRWNLMRRSDIVVVGHRKASMYVLRFGVARGLGRQVMHRAADSSGET
Homology
BLAST of Moc08g43580 vs. NCBI nr
Match: CAN65728.1 (hypothetical protein VITISV_015033 [Vitis vinifera])

HSP 1 Score: 126.7 bits (317), Expect = 2.6e-25
Identity = 75/191 (39.27%), Postives = 107/191 (56.02%), Query Frame = 0

Query: 1   MTDKTWNEIDEQVVANIRMAL--GVFRLVVKETIAKELLKGLQDRYEKPSANTKIFLWTK 60
           M  + W  +D QV+  IR+ L   V   VVKE    +L+K L   YEKPSAN K+ L  K
Sbjct: 47  MKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKK 106

Query: 61  YFNIHMEEGTSVNSHINELTDILNKLEKMGDKIEEEVKAMRLLTSLPDSWEMMKTAVSNS 120
            FN+ M E  SV  H+NE   I N+L  +    ++E++A+ +L SLP+SWE M+ AVSNS
Sbjct: 107 LFNLKMTENASVTQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNS 166

Query: 121 RGENSLKFSAICDAVLSEEARRKLGKMSATTLGAENGIESVLVAQFKGKGKMKYNGKQEH 180
            G+  LK++ I D +L+EE R +         G  +G  S L  + KGKG  K   K   
Sbjct: 167 TGKEKLKYNDIXDLILAEEIRXR-------DAGETSGSGSTLNLETKGKGHFKRQCKSPK 226

Query: 181 RNNRENRWNLM 190
           +NN ++  N++
Sbjct: 227 KNNEDDSTNVV 230

BLAST of Moc08g43580 vs. NCBI nr
Match: KAG7593230.1 (Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa])

HSP 1 Score: 125.2 bits (313), Expect = 7.4e-25
Identity = 83/210 (39.52%), Postives = 120/210 (57.14%), Query Frame = 0

Query: 1   MTDKTWNEIDEQVVANIRMAL--GVFRLVVKETIAKELLKGLQDRYEKPSANTKIFLWTK 60
           M  + W+ +D QV+  IR+ L   V   V KE   + L+K L D YEKPSAN K+FL  K
Sbjct: 46  MAQEEWDLLDRQVLGVIRLTLSKNVAHNVAKEKTTEGLMKVLSDMYEKPSANNKVFLMKK 105

Query: 61  YFNIHMEEGTSVNSHINELTDILNKLEKMGDKIEEEVKAMRLLTSLPDSWEMMKTAVSNS 120
            F++ MEEG  V +H+NE   I+N+L  +  + ++EV+A+ LL SLP+SWE M+ AVSNS
Sbjct: 106 LFHLKMEEGGPVATHVNEFNTIVNQLSSVEIEFDDEVRALILLASLPNSWEPMRAAVSNS 165

Query: 121 RGENSLKFSAICDAVLSEEARR-KLGKMS-ATTLGAEN-GIESVLVAQFKGKGKMKYNGK 180
            G   LKF  + D +L EE RR   G+ S ++    EN G +     Q +G+ K + NGK
Sbjct: 166 VGNQKLKFVDVRDRILGEEVRRIDTGETSTSSAFNVENRGRDQNRRNQNRGRSKSR-NGK 225

Query: 181 QEHRNNRE-NRWNLMRRSDIVVVGHRKASM 205
            + ++ +    WN  +      V   KAS+
Sbjct: 226 GQSKSRKPVECWNCGKTGHFKTVNTTKASI 254

BLAST of Moc08g43580 vs. NCBI nr
Match: RVX10218.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 124.8 bits (312), Expect = 9.7e-25
Identity = 73/191 (38.22%), Postives = 108/191 (56.54%), Query Frame = 0

Query: 1   MTDKTWNEIDEQVVANIRMAL--GVFRLVVKETIAKELLKGLQDRYEKPSANTKIFLWTK 60
           M  + W  +D QV+  IR+ L   V   +VKE    +L+K L D YEKPSAN K+ L  K
Sbjct: 47  MKAEEWALLDRQVLGVIRLTLSRSVAHNIVKEKTTIDLMKALSDMYEKPSANNKVHLMKK 106

Query: 61  YFNIHMEEGTSVNSHINELTDILNKLEKMGDKIEEEVKAMRLLTSLPDSWEMMKTAVSNS 120
            FN+ M E  SV  H+NE   I N+L  +    ++E++A+ +L SLP+SWE+M+  VSNS
Sbjct: 107 LFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSWEVMRMTVSNS 166

Query: 121 RGENSLKFSAICDAVLSEEARRKLGKMSATTLGAENGIESVLVAQFKGKGKMKYNGKQEH 180
            G+   K++ I D +L+EE RRK         G  +G  S L  + +G+G  K   K   
Sbjct: 167 TGKEKFKYNDIRDLILAEEIRRK-------DAGETSGFGSDLNLETRGRGHFKRQCKSPK 226

Query: 181 RNNRENRWNLM 190
           +NN ++  N++
Sbjct: 227 KNNEDDSANVV 230

BLAST of Moc08g43580 vs. NCBI nr
Match: CAN81130.1 (hypothetical protein VITISV_003944 [Vitis vinifera])

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-24
Identity = 75/189 (39.68%), Postives = 108/189 (57.14%), Query Frame = 0

Query: 1   MTDKTWNEIDEQVVANIRMAL--GVFRLVVKETIAKELLKGLQDRYEKPSANTKIFLWTK 60
           M  + W  +D QV+  IR+ L   V   VVKE    +L+K L   YEKPSAN K+ L TK
Sbjct: 47  MKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTXDLMKALSGMYEKPSANNKVHLMTK 106

Query: 61  YFNIHMEEGTSVNSHINELTDILNKLEKMGDKIEEEVKAMRLLTSLPDSWEMMKTAVSNS 120
            FN+ M E  SV  H+NE   I N+L  +    ++E++A+ +L SLP+SWE M+ AVSNS
Sbjct: 107 LFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNS 166

Query: 121 RGENSLKFSAICDAVLSEEARRKLGKMSATTLGAENGIESVLVAQFKGKGKMKYN--GKQ 180
            G+  LK++ I D +L+EE RR+         G  +G  S L  + +G+G  + +  G+ 
Sbjct: 167 TGKEKLKYNDIRDLILAEEIRRR-------DAGETSGSGSALNLETRGRGNNRNSNQGRS 226

Query: 181 EHRNNRENR 186
             RN+  NR
Sbjct: 227 NSRNSNRNR 228

BLAST of Moc08g43580 vs. NCBI nr
Match: CAN73240.1 (hypothetical protein VITISV_035336 [Vitis vinifera])

HSP 1 Score: 124.0 bits (310), Expect = 1.7e-24
Identity = 75/189 (39.68%), Postives = 107/189 (56.61%), Query Frame = 0

Query: 1   MTDKTWNEIDEQVVANIRMAL--GVFRLVVKETIAKELLKGLQDRYEKPSANTKIFLWTK 60
           M  + W  +D QV+  IR+ L   V   VVKE    +L+K L   YEKPSAN K+ L  K
Sbjct: 47  MKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKK 106

Query: 61  YFNIHMEEGTSVNSHINELTDILNKLEKMGDKIEEEVKAMRLLTSLPDSWEMMKTAVSNS 120
            FN+ M E  SV  H+NE   I N+L  +    ++E++A+ +L SLP+SWE M+ AVSNS
Sbjct: 107 LFNLKMAENASVXQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNS 166

Query: 121 RGENSLKFSAICDAVLSEEARRKLGKMSATTLGAENGIESVLVAQFKGKGKMKYN--GKQ 180
            G+  LK++ I D +L+EE RR+         G  +G  S L  + +G+G  K +  G+ 
Sbjct: 167 XGKEKLKYNDIRDLILAEEIRRR-------DAGETSGSGSALNLEXRGRGNNKNSNQGRS 226

Query: 181 EHRNNRENR 186
             RN+  NR
Sbjct: 227 NSRNSNRNR 228

BLAST of Moc08g43580 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.9e-13
Identity = 53/187 (28.34%), Postives = 91/187 (48.66%), Query Frame = 0

Query: 1   MTDKTWNEIDEQVVANIRMALG--VFRLVVKETIAKELLKGLQDRYEKPSANTKIFLWTK 60
           M  + W ++DE+  + IR+ L   V   ++ E  A+ +   L+  Y   +   K++L  +
Sbjct: 47  MKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQ 106

Query: 61  YFNIHMEEGTSVNSHINELTDILNKLEKMGDKIEEEVKAMRLLTSLPDSWEMMKTAVSNS 120
            + +HM EGT+  SH+N    ++ +L  +G KIEEE KA+ LL SLP S++ + T + + 
Sbjct: 107 LYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILH- 166

Query: 121 RGENSLKFSAICDAVLSEEARRKLGKMSATTL-----GAENGIESVLVAQFKGKGKMKYN 180
            G+ +++   +  A+L  E  RK  +     L     G      S    +   +GK K  
Sbjct: 167 -GKTTIELKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNR 226

BLAST of Moc08g43580 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 45.4 bits (106), Expect = 9.8e-04
Identity = 32/141 (22.70%), Postives = 69/141 (48.94%), Query Frame = 0

Query: 3   DKTWNEIDEQVVANI--RMALGVFRLVVKETIAKELLKGLQDRYEKPSANTKIFLWTKYF 62
           D +W + +    + I   ++         +  A+++L+ L   YE+ S  +++ L  +  
Sbjct: 45  DDSWKKAERCAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLL 104

Query: 63  NIHMEEGTSVNSHINELTDILNKLEKMGDKIEEEVKAMRLLTSLPDSWEMMKTAVSNSRG 122
           ++ +    S+ SH +   +++++L   G KIEE  K   LL +LP  ++ + TA+     
Sbjct: 105 SLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSE 164

Query: 123 ENSLKFSAICDAVLSEEARRK 142
           EN L  + + + +L +E + K
Sbjct: 165 EN-LTLAFVKNRLLDQEIKIK 184

BLAST of Moc08g43580 vs. ExPASy TrEMBL
Match: A5BJK9 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_015033 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.2e-25
Identity = 75/191 (39.27%), Postives = 107/191 (56.02%), Query Frame = 0

Query: 1   MTDKTWNEIDEQVVANIRMAL--GVFRLVVKETIAKELLKGLQDRYEKPSANTKIFLWTK 60
           M  + W  +D QV+  IR+ L   V   VVKE    +L+K L   YEKPSAN K+ L  K
Sbjct: 47  MKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKK 106

Query: 61  YFNIHMEEGTSVNSHINELTDILNKLEKMGDKIEEEVKAMRLLTSLPDSWEMMKTAVSNS 120
            FN+ M E  SV  H+NE   I N+L  +    ++E++A+ +L SLP+SWE M+ AVSNS
Sbjct: 107 LFNLKMTENASVTQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNS 166

Query: 121 RGENSLKFSAICDAVLSEEARRKLGKMSATTLGAENGIESVLVAQFKGKGKMKYNGKQEH 180
            G+  LK++ I D +L+EE R +         G  +G  S L  + KGKG  K   K   
Sbjct: 167 TGKEKLKYNDIXDLILAEEIRXR-------DAGETSGSGSTLNLETKGKGHFKRQCKSPK 226

Query: 181 RNNRENRWNLM 190
           +NN ++  N++
Sbjct: 227 KNNEDDSTNVV 230

BLAST of Moc08g43580 vs. ExPASy TrEMBL
Match: A0A0D3AEM1 (CCHC-type domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.2e-25
Identity = 79/186 (42.47%), Postives = 107/186 (57.53%), Query Frame = 0

Query: 1   MTDKTWNEIDEQVVANIRMAL--GVFRLVVKETIAKELLKGLQDRYEKPSANTKIFLWTK 60
           M    W  +D QV+  IR+ L   V   VVKE   + L+K L D YEKPSAN+K+FL  K
Sbjct: 46  MDQDEWELLDRQVLGVIRLTLSKNVAHNVVKEKTTEGLMKVLSDMYEKPSANSKVFLMKK 105

Query: 61  YFNIHMEEGTSVNSHINELTDILNKLEKMGDKIEEEVKAMRLLTSLPDSWEMMKTAVSNS 120
            F++ MEEG  V +HINE   I+N+L  +  + E+EV+A+ LL SLP+SWE M+ AVSNS
Sbjct: 106 LFHLKMEEGGLVTAHINEFNTIVNQLSSVEIEFEDEVRALILLASLPNSWESMRVAVSNS 165

Query: 121 RGENSLKFSAICDAVLSEEARRKLGKMSATTLGAENGIESVLVAQFKGKGKMKYNGKQEH 180
            G   LKF+ + D +L+EE RR +    A+T  A N               ++  G+   
Sbjct: 166 VGTQKLKFNDVRDRILAEEVRR-IDSGEASTSSAFN---------------VENRGRNPD 215

Query: 181 RNNREN 185
           RNNR N
Sbjct: 226 RNNRSN 215

BLAST of Moc08g43580 vs. ExPASy TrEMBL
Match: A0A0D3CS45 (Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 3.6e-25
Identity = 78/186 (41.94%), Postives = 106/186 (56.99%), Query Frame = 0

Query: 1   MTDKTWNEIDEQVVANIRMAL--GVFRLVVKETIAKELLKGLQDRYEKPSANTKIFLWTK 60
           M    W  +D QV+  IR+ L   V   V KE I + L+K L D YEKPSAN K+FL  K
Sbjct: 46  MDQDEWELLDRQVLGVIRLTLSKNVAHNVAKEKITEGLMKVLSDMYEKPSANNKVFLMKK 105

Query: 61  YFNIHMEEGTSVNSHINELTDILNKLEKMGDKIEEEVKAMRLLTSLPDSWEMMKTAVSNS 120
            F++ MEEG  V +H+NE   I+N+L  +  + E+EV+A+ LL SLP+SWE M+ AVSNS
Sbjct: 106 LFHLKMEEGGLVAAHVNEFNTIVNQLSSVEIEFEDEVRALILLASLPNSWEPMRAAVSNS 165

Query: 121 RGENSLKFSAICDAVLSEEARRKLGKMSATTLGAENGIESVLVAQFKGKGKMKYNGKQEH 180
            G   LKF+ + D +L+EE RR +    A+T  A N               ++  G+   
Sbjct: 166 VGTQKLKFNDVRDRILAEEVRR-IDSGEASTSSAFN---------------VENRGRNPD 215

Query: 181 RNNREN 185
           RNNR N
Sbjct: 226 RNNRSN 215

BLAST of Moc08g43580 vs. ExPASy TrEMBL
Match: A0A438JMM5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2179 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.7e-25
Identity = 73/191 (38.22%), Postives = 108/191 (56.54%), Query Frame = 0

Query: 1   MTDKTWNEIDEQVVANIRMAL--GVFRLVVKETIAKELLKGLQDRYEKPSANTKIFLWTK 60
           M  + W  +D QV+  IR+ L   V   +VKE    +L+K L D YEKPSAN K+ L  K
Sbjct: 47  MKAEEWALLDRQVLGVIRLTLSRSVAHNIVKEKTTIDLMKALSDMYEKPSANNKVHLMKK 106

Query: 61  YFNIHMEEGTSVNSHINELTDILNKLEKMGDKIEEEVKAMRLLTSLPDSWEMMKTAVSNS 120
            FN+ M E  SV  H+NE   I N+L  +    ++E++A+ +L SLP+SWE+M+  VSNS
Sbjct: 107 LFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSWEVMRMTVSNS 166

Query: 121 RGENSLKFSAICDAVLSEEARRKLGKMSATTLGAENGIESVLVAQFKGKGKMKYNGKQEH 180
            G+   K++ I D +L+EE RRK         G  +G  S L  + +G+G  K   K   
Sbjct: 167 TGKEKFKYNDIRDLILAEEIRRK-------DAGETSGFGSDLNLETRGRGHFKRQCKSPK 226

Query: 181 RNNRENRWNLM 190
           +NN ++  N++
Sbjct: 227 KNNEDDSANVV 230

BLAST of Moc08g43580 vs. ExPASy TrEMBL
Match: A5BGX3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_003944 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 6.1e-25
Identity = 75/189 (39.68%), Postives = 108/189 (57.14%), Query Frame = 0

Query: 1   MTDKTWNEIDEQVVANIRMAL--GVFRLVVKETIAKELLKGLQDRYEKPSANTKIFLWTK 60
           M  + W  +D QV+  IR+ L   V   VVKE    +L+K L   YEKPSAN K+ L TK
Sbjct: 47  MKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTXDLMKALSGMYEKPSANNKVHLMTK 106

Query: 61  YFNIHMEEGTSVNSHINELTDILNKLEKMGDKIEEEVKAMRLLTSLPDSWEMMKTAVSNS 120
            FN+ M E  SV  H+NE   I N+L  +    ++E++A+ +L SLP+SWE M+ AVSNS
Sbjct: 107 LFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNS 166

Query: 121 RGENSLKFSAICDAVLSEEARRKLGKMSATTLGAENGIESVLVAQFKGKGKMKYN--GKQ 180
            G+  LK++ I D +L+EE RR+         G  +G  S L  + +G+G  + +  G+ 
Sbjct: 167 TGKEKLKYNDIRDLILAEEIRRR-------DAGETSGSGSALNLETRGRGNNRNSNQGRS 226

Query: 181 EHRNNRENR 186
             RN+  NR
Sbjct: 227 NSRNSNRNR 228

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CAN65728.12.6e-2539.27hypothetical protein VITISV_015033 [Vitis vinifera][more]
KAG7593230.17.4e-2539.52Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa][more]
RVX10218.19.7e-2538.22Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
CAN81130.11.3e-2439.68hypothetical protein VITISV_003944 [Vitis vinifera][more]
CAN73240.11.7e-2439.68hypothetical protein VITISV_035336 [Vitis vinifera][more]
Match NameE-valueIdentityDescription
P109788.9e-1328.34Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041469.8e-0422.70Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Match NameE-valueIdentityDescription
A5BJK91.2e-2539.27Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI... [more]
A0A0D3AEM11.2e-2542.47CCHC-type domain-containing protein OS=Brassica oleracea var. oleracea OX=109376... [more]
A0A0D3CS453.6e-2541.94Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1[more]
A0A438JMM54.7e-2538.22Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A5BGX36.1e-2539.68Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_003944 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 74..101
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 19..141
e-value: 8.9E-29
score: 100.0
NoneNo IPR availablePANTHERPTHR34676:SF1ZINC FINGER, CCHC-TYPE, TUBBY C-TERMINAL-LIKE DOMAIN PROTEIN-RELATEDcoord: 1..205
NoneNo IPR availablePANTHERPTHR34676FAMILY NOT NAMEDcoord: 1..205

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc08g43580.1Moc08g43580.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding